HEADER HYDROLASE 24-JUL-07 2V6Y TITLE STRUCTURE OF THE MIT DOMAIN FROM A S. SOLFATARICUS VPS4- TITLE 2 LIKE ATPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: AAA FAMILY ATPASE, P60 KATANIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MIT DOMAIN, RESIDUES 1-83; COMPND 5 SYNONYM: VPS4-LIKE AAA-ATPASE; COMPND 6 EC: 3.6.4.6; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: AAA FAMILY ATPASE, P60 KATANIN; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: MIT DOMAIN, RESIDUES 1-83; COMPND 12 SYNONYM: VPS4-LIKE AAA-ATPASE; COMPND 13 EC: 3.6.4.6; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: POPTH; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 10 ORGANISM_TAXID: 2287; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: B834(DE3); SOURCE 14 EXPRESSION_SYSTEM_PLASMID: POPTH KEYWDS MIT, VPS4, ARCHAEA, AAA-ATPASE, ATP-BINDING, MICROTUBULE INTERACTING KEYWDS 2 AND TRAFFICKING DOMAIN, NUCLEOTIDE-BINDING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.OBITA,S.SAKSENA,S.GHAZI-TABATABAI,D.J.GILL,O.PERISIC,S.D.EMR, AUTHOR 2 R.L.WILLIAMS REVDAT 3 13-JUL-11 2V6Y 1 VERSN REVDAT 2 24-FEB-09 2V6Y 1 VERSN REVDAT 1 16-OCT-07 2V6Y 0 JRNL AUTH T.OBITA,S.SAKSENA,S.GHAZI-TABATABAI,D.J.GILL,O.PERISIC, JRNL AUTH 2 S.D.EMR,R.L.WILLIAMS JRNL TITL STRUCTURAL BASIS FOR SELECTIVE RECOGNITION OF ESCRT-III BY JRNL TITL 2 THE AAA ATPASE VPS4 JRNL REF NATURE V. 449 735 2007 JRNL REFN ISSN 0028-0836 JRNL PMID 17928861 JRNL DOI 10.1038/NATURE06171 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOODWITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 9131 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.252 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 463 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 675 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3140 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1185 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 8 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.76000 REMARK 3 B22 (A**2) : 2.19000 REMARK 3 B33 (A**2) : -1.43000 REMARK 3 B12 (A**2) : -0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.330 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.248 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.198 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.134 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1216 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 8 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1631 ; 1.333 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16 ; 0.952 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 144 ; 7.866 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;37.005 ;24.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 245 ;18.856 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;20.959 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 190 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 862 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 527 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 7 ; 0.345 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 849 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 4 ; 0.033 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 19 ; 0.182 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.261 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 1 ; 0.001 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.259 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 756 ; 0.689 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1178 ; 0.915 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 532 ; 1.679 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 453 ; 2.686 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 1000 3 REMARK 3 1 B 1 B 1000 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 284 ; .07 ; .05 REMARK 3 LOOSE POSITIONAL 1 A (A): 288 ; .54 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 284 ; .09 ; .50 REMARK 3 LOOSE THERMAL 1 A (A**2): 288 ; 1.45 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 75 REMARK 3 RESIDUE RANGE : A 1076 A 1076 REMARK 3 ORIGIN FOR THE GROUP (A): -15.4157 -1.5833 16.2190 REMARK 3 T TENSOR REMARK 3 T11: -.1187 T22: -.1287 REMARK 3 T33: -.2397 T12: -.2112 REMARK 3 T13: .0087 T23: .1170 REMARK 3 L TENSOR REMARK 3 L11: 3.4973 L22: 4.1285 REMARK 3 L33: 8.6311 L12: -1.9063 REMARK 3 L13: -.8871 L23: 1.5827 REMARK 3 S TENSOR REMARK 3 S11: -.2261 S12: -.0621 S13: .0406 REMARK 3 S21: -.3579 S22: .2814 S23: -.0688 REMARK 3 S31: .6112 S32: -.3766 S33: -.0554 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 75 REMARK 3 RESIDUE RANGE : B 1076 B 1076 REMARK 3 ORIGIN FOR THE GROUP (A): 14.2829 14.5652 16.7074 REMARK 3 T TENSOR REMARK 3 T11: -.2547 T22: -.1407 REMARK 3 T33: -.0823 T12: -.0485 REMARK 3 T13: .1652 T23: -.0418 REMARK 3 L TENSOR REMARK 3 L11: 10.2286 L22: 6.8763 REMARK 3 L33: 10.4378 L12: -3.0857 REMARK 3 L13: 1.1574 L23: -2.6349 REMARK 3 S TENSOR REMARK 3 S11: -.3664 S12: -.0837 S13: -.4569 REMARK 3 S21: -.5267 S22: .0619 S23: -.4472 REMARK 3 S31: .6266 S32: .8959 S33: .3045 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 2V6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUL-07. REMARK 100 THE PDBE ID CODE IS EBI-33264. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91840 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TORROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27901 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.40 REMARK 200 RESOLUTION RANGE LOW (A) : 61.50 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.6 REMARK 200 R MERGE (I) : 0.07 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.30 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.6 REMARK 200 R MERGE FOR SHELL (I) : 0.37 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.90 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SNB, AUTOSHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.8 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.1 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RESERVOIR: 0.6 M AMMONIUM REMARK 280 TARTRATE AND 2% PEG4K PROTEIN SOLUTION: 9 MG/ML IN 20 MM REMARK 280 TRIS PH 8, 100 MM NACL, 2MM DTT REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.08900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.59200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.63350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.59200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.08900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.63350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.08900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.63350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.59200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.63350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.08900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.59200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 76 REMARK 465 ALA A 77 REMARK 465 SER A 78 REMARK 465 SER A 79 REMARK 465 ASP A 80 REMARK 465 GLY A 81 REMARK 465 SER A 82 REMARK 465 GLY A 83 REMARK 465 MET B 1 REMARK 465 LYS B 26 REMARK 465 VAL B 27 REMARK 465 PRO B 76 REMARK 465 ALA B 77 REMARK 465 SER B 78 REMARK 465 SER B 79 REMARK 465 ASP B 80 REMARK 465 GLY B 81 REMARK 465 SER B 82 REMARK 465 GLY B 83 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 75 CG CD1 CD2 REMARK 470 LEU B 75 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 74 62.63 -152.39 REMARK 500 VAL B 74 27.55 153.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS B 73 VAL B 74 -74.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS B 73 22.4 L L OUTSIDE RANGE REMARK 500 VAL B 74 24.2 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SRT A 1076 REMARK 610 SRT B 1076 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SRT A1076 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SRT B1076 REMARK 999 REMARK 999 SEQUENCE REMARK 999 SSO0909 MIT DOMAIN DBREF 2V6Y A 1 83 UNP Q97ZJ7 Q97ZJ7_SULSO 1 83 DBREF 2V6Y B 1 83 UNP Q97ZJ7 Q97ZJ7_SULSO 1 83 SEQADV 2V6Y ASP B 28 UNP Q97ZJ7 GLU 28 CONFLICT SEQRES 1 A 83 MET SER ALA GLN VAL MET LEU GLU ASP MET ALA ARG LYS SEQRES 2 A 83 TYR ALA ILE LEU ALA VAL LYS ALA ASP LYS GLU GLY LYS SEQRES 3 A 83 VAL GLU ASP ALA ILE THR TYR TYR LYS LYS ALA ILE GLU SEQRES 4 A 83 VAL LEU SER GLN ILE ILE VAL LEU TYR PRO GLU SER VAL SEQRES 5 A 83 ALA ARG THR ALA TYR GLU GLN MET ILE ASN GLU TYR LYS SEQRES 6 A 83 LYS ARG ILE SER TYR LEU GLU LYS VAL LEU PRO ALA SER SEQRES 7 A 83 SER ASP GLY SER GLY SEQRES 1 B 83 MET SER ALA GLN VAL MET LEU GLU ASP MET ALA ARG LYS SEQRES 2 B 83 TYR ALA ILE LEU ALA VAL LYS ALA ASP LYS GLU GLY LYS SEQRES 3 B 83 VAL ASP ASP ALA ILE THR TYR TYR LYS LYS ALA ILE GLU SEQRES 4 B 83 VAL LEU SER GLN ILE ILE VAL LEU TYR PRO GLU SER VAL SEQRES 5 B 83 ALA ARG THR ALA TYR GLU GLN MET ILE ASN GLU TYR LYS SEQRES 6 B 83 LYS ARG ILE SER TYR LEU GLU LYS VAL LEU PRO ALA SER SEQRES 7 B 83 SER ASP GLY SER GLY HET SRT A1076 14 HET SRT B1076 14 HETNAM SRT S,R MESO-TARTARIC ACID FORMUL 3 SRT 2(C4 H6 O6) FORMUL 4 HOH *8(H2 O) HELIX 1 1 SER A 2 GLU A 24 1 23 HELIX 2 2 LYS A 26 TYR A 48 1 23 HELIX 3 3 ALA A 53 GLU A 72 1 20 HELIX 4 4 SER B 2 GLU B 24 1 23 HELIX 5 5 ASP B 28 TYR B 48 1 21 HELIX 6 6 ALA B 53 GLU B 72 1 20 CISPEP 1 MET A 1 SER A 2 0 -3.69 SITE 1 AC1 4 GLN A 4 TYR A 48 SER A 51 VAL A 52 SITE 1 AC2 5 ARG A 12 GLN B 4 TYR B 48 SER B 51 SITE 2 AC2 5 VAL B 52 CRYST1 56.178 69.267 123.184 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017801 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014437 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008118 0.00000 MTRIX1 1 -0.003859 0.061003 0.998130 -33.19650 1 MTRIX2 1 0.110319 0.992071 -0.060206 -16.39670 1 MTRIX3 1 -0.993889 0.109880 -0.010558 28.98410 1