HEADER TRANSFERASE/DNA 28-AUG-07 2VA2 TITLE COMPLEX STRUCTURE OF SULFOLOBUS SOLFATARICUS DPO4 AND DNA DUPLEX TITLE 2 CONTAINING A HYDROPHOBIC THYMINE ISOSTERE 2,4-DIFLUOROTOLUENE TITLE 3 NUCLEOTIDE IN THE TEMPLATE STRAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: DPO4; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *CP*TP*A)-3'; COMPND 10 CHAIN: C, E; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: 13-MER PRIMER; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: 5'-D(*TP*TP*CP*AP*GP*DFTP*AP*GP*TP*CP*CP COMPND 15 *TP*TP*CP*CP*CP*CP*C)-3'; COMPND 16 CHAIN: D, F; COMPND 17 ENGINEERED: YES; COMPND 18 OTHER_DETAILS: 18-MER TEMPLATE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: P2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B-DPO4-NHIS; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES KEYWDS TRANSFERASE-DNA COMPLEX, DNA-DIRECTED DNA POLYMERASE, P2 DNA KEYWDS 2 POLYMERASE IV, TRANSFERASE, NUCLEOTIDYLTRANSFERASE, MUTATOR PROTEIN, KEYWDS 3 DNA REPLICATION, DNA REPAIR, DNA-BINDING, METAL-BINDING, TRANSLESION KEYWDS 4 DNA POLYMERASE, 2, DDCTP, MAGNESIUM, DNA DAMAGE EXPDTA X-RAY DIFFRACTION AUTHOR A.IRIMIA,P.S.PALLAN,M.EGLI REVDAT 5 13-DEC-23 2VA2 1 REMARK LINK REVDAT 4 09-APR-14 2VA2 1 HEADER KEYWDS JRNL REMARK REVDAT 4 2 1 VERSN HET FORMUL LINK REVDAT 4 3 1 SITE ATOM HETATM CONECT REVDAT 4 4 1 MASTER REVDAT 3 24-FEB-09 2VA2 1 VERSN REVDAT 2 18-DEC-07 2VA2 1 JRNL REVDAT 1 30-OCT-07 2VA2 0 JRNL AUTH A.IRIMIA,R.L.EOFF,P.S.PALLAN,F.P.GUENGERICH,M.EGLI JRNL TITL STRUCTURE AND ACTIVITY OF Y-CLASS DNA POLYMERASE DPO4 FROM JRNL TITL 2 SULFOLOBUS SOLFATARICUS WITH TEMPLATES CONTAINING THE JRNL TITL 3 HYDROPHOBIC THYMINE ANALOG 2,4- DIFLUOROTOLUENE. JRNL REF J.BIOL.CHEM. V. 282 36421 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17951245 JRNL DOI 10.1074/JBC.M707267200 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 950150.290 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 28485 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1383 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4491 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 233 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5516 REMARK 3 NUCLEIC ACID ATOMS : 1222 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 217 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -12.07000 REMARK 3 B22 (A**2) : 15.95000 REMARK 3 B33 (A**2) : -3.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.29000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.35 REMARK 3 ESD FROM SIGMAA (A) : 0.50 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.59 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.100 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.960 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.300 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.270 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.750 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.830 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 40.90 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA_RNA_NEW.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : DDCTP.PARAM REMARK 3 PARAMETER FILE 5 : ION.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA_RNA_NEW.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : DDCTP.TOP REMARK 3 TOPOLOGY FILE 5 : ION.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2VA2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1290033575. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27671 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 22.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2BQ3 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 MM NACL, 2%GLYCEROL, 10 MM TRIS PH REMARK 280 7.5, 2.5 MM CACL2, 0.5 MM DDCTP, 6% PEG 3350,0.1 MM AMMONIUM REMARK 280 ACETATE, 0.05 CALCIUM ACETATE, PH 7.4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.93750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 ILE A 344 REMARK 465 GLY A 345 REMARK 465 LEU A 346 REMARK 465 ASP A 347 REMARK 465 LYS A 348 REMARK 465 PHE A 349 REMARK 465 PHE A 350 REMARK 465 ASP A 351 REMARK 465 THR A 352 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 ILE B 344 REMARK 465 GLY B 345 REMARK 465 LEU B 346 REMARK 465 ASP B 347 REMARK 465 LYS B 348 REMARK 465 PHE B 349 REMARK 465 PHE B 350 REMARK 465 ASP B 351 REMARK 465 THR B 352 REMARK 465 DT D 1 REMARK 465 DT D 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 343 CA C O CB REMARK 470 ALA B 343 CA C O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 82 O HOH B 2026 2.01 REMARK 500 O HOH A 2068 O HOH A 2070 2.11 REMARK 500 NH2 ARG B 240 O HOH B 2064 2.12 REMARK 500 O HOH B 2074 O HOH B 2075 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC D 3 P DC D 3 OP3 -0.086 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 240 CG - CD - NE ANGL. DEV. = 13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 10 50.75 28.19 REMARK 500 GLU A 38 -93.48 29.78 REMARK 500 SER A 96 127.15 170.79 REMARK 500 ASP A 110 74.72 -113.94 REMARK 500 ILE A 111 21.24 -78.35 REMARK 500 TYR A 118 -19.17 144.44 REMARK 500 SER A 145 -161.13 -178.05 REMARK 500 ASN A 161 47.25 36.00 REMARK 500 ILE A 163 110.53 -177.97 REMARK 500 ILE A 180 -15.78 -49.07 REMARK 500 ILE A 180 -15.78 -49.76 REMARK 500 SER A 207 -79.22 -75.98 REMARK 500 ILE A 208 136.04 -26.65 REMARK 500 PHE A 210 -75.90 -51.99 REMARK 500 ASP A 211 -20.49 -36.78 REMARK 500 LYS A 214 24.45 -67.64 REMARK 500 ILE A 217 13.23 -140.53 REMARK 500 GLU A 232 20.79 -145.31 REMARK 500 ASN A 234 -79.26 -91.04 REMARK 500 GLU A 235 107.32 20.39 REMARK 500 ASP A 277 -115.36 65.57 REMARK 500 ARG A 328 155.47 -46.78 REMARK 500 GLU A 342 -66.81 -100.44 REMARK 500 TYR B 10 55.45 23.40 REMARK 500 LEU B 23 -23.18 -36.27 REMARK 500 PHE B 37 129.92 174.43 REMARK 500 GLU B 38 -93.67 21.16 REMARK 500 ASP B 39 58.01 -105.25 REMARK 500 ALA B 44 -71.85 -74.74 REMARK 500 GLU B 49 18.86 -68.61 REMARK 500 ALA B 50 -17.55 -151.06 REMARK 500 LYS B 66 21.59 -74.13 REMARK 500 ILE B 67 -34.03 -141.96 REMARK 500 ARG B 77 70.81 -112.66 REMARK 500 GLU B 79 -37.38 -35.07 REMARK 500 SER B 103 -164.61 -168.53 REMARK 500 LYS B 114 14.33 -140.54 REMARK 500 ASP B 117 162.75 53.19 REMARK 500 SER B 145 -178.05 -176.10 REMARK 500 ASN B 161 50.15 24.61 REMARK 500 ILE B 163 130.95 170.05 REMARK 500 ARG B 176 -69.19 -101.65 REMARK 500 LEU B 178 127.49 -32.20 REMARK 500 ILE B 189 4.17 -50.74 REMARK 500 ASN B 200 8.32 -153.77 REMARK 500 LEU B 202 -71.15 -46.91 REMARK 500 LYS B 214 3.53 -61.68 REMARK 500 ILE B 217 -31.65 -138.96 REMARK 500 GLU B 219 -88.61 -45.18 REMARK 500 GLU B 219 -88.60 -45.44 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLU A 120 10.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2001 DISTANCE = 6.74 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1343 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 7 OD1 REMARK 620 2 PHE A 8 O 62.9 REMARK 620 3 ASP A 105 OD2 139.5 108.4 REMARK 620 4 DCT A1345 O2B 149.6 127.3 68.9 REMARK 620 5 DCT A1345 O3B 106.0 89.9 113.7 51.2 REMARK 620 6 DCT A1345 O1G 72.0 107.0 141.4 77.6 51.5 REMARK 620 7 HOH A2089 O 140.8 80.0 62.1 51.2 59.5 110.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1344 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 181 O REMARK 620 2 ILE A 186 O 116.7 REMARK 620 3 HOH A2023 O 138.8 104.4 REMARK 620 4 HOH A2048 O 73.2 166.2 66.7 REMARK 620 5 HOH A2050 O 103.7 79.4 85.1 89.0 REMARK 620 6 HOH C2014 O 85.3 91.8 91.6 98.8 169.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1346 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DCT A1345 O1A REMARK 620 2 HOH A2002 O 48.7 REMARK 620 3 HOH A2088 O 82.8 129.2 REMARK 620 4 HOH C2017 O 108.2 92.2 89.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1343 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 7 OD1 REMARK 620 2 PHE B 8 O 89.2 REMARK 620 3 ASP B 105 OD2 123.9 100.1 REMARK 620 4 HOH B2037 O 76.8 164.2 93.9 REMARK 620 5 DCT E1014 O3B 111.1 89.9 124.0 88.4 REMARK 620 6 DCT E1014 O2B 146.0 115.7 76.4 74.7 50.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1344 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 181 O REMARK 620 2 ILE B 186 O 88.1 REMARK 620 3 HOH B2053 O 90.6 134.6 REMARK 620 4 HOH B2054 O 83.7 159.9 64.0 REMARK 620 5 HOH B2055 O 90.7 70.0 64.6 128.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B3002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B2049 O REMARK 620 2 DCT E1014 O1A 99.3 REMARK 620 3 HOH E2010 O 144.3 58.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1343 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1344 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCT A 1345 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1346 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1343 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1344 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DCT E 1014 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2V9W RELATED DB: PDB REMARK 900 COMPLEX STRUCTURE OF SULFOLOBUS SOLFATARICUS DPO4 AND DNA DUPLEX REMARK 900 CONTAINING A HYDROPHOBIC THYMINE ISOSTERE 2, 4-DIFLUOROTOLUENE REMARK 900 NUCLEOTIDE IN THE TEMPLATE STRAND REMARK 900 RELATED ID: 2VA3 RELATED DB: PDB REMARK 900 COMPLEX STRUCTURE OF SULFOLOBUS SOLFATARICUS DPO4 AND DNA DUPLEX REMARK 900 CONTAINING A HYDROPHOBIC THYMINE ISOSTERE 2, 4-DIFLUOROTOLUENE REMARK 900 NUCLEOTIDE IN THE TEMPLATE STRAND DBREF 2VA2 A -5 0 PDB 2VA2 2VA2 -5 0 DBREF 2VA2 A 1 352 UNP Q97W02 DPO42_SULSO 1 352 DBREF 2VA2 B -5 0 PDB 2VA2 2VA2 -5 0 DBREF 2VA2 B 1 352 UNP Q97W02 DPO42_SULSO 1 352 DBREF 2VA2 C 1 13 PDB 2VA2 2VA2 1 13 DBREF 2VA2 D 1 18 PDB 2VA2 2VA2 1 18 DBREF 2VA2 E 1 13 PDB 2VA2 2VA2 1 13 DBREF 2VA2 F 1 18 PDB 2VA2 2VA2 1 18 SEQRES 1 A 358 HIS HIS HIS HIS HIS HIS MET ILE VAL LEU PHE VAL ASP SEQRES 2 A 358 PHE ASP TYR PHE TYR ALA GLN VAL GLU GLU VAL LEU ASN SEQRES 3 A 358 PRO SER LEU LYS GLY LYS PRO VAL VAL VAL CYS VAL PHE SEQRES 4 A 358 SER GLY ARG PHE GLU ASP SER GLY ALA VAL ALA THR ALA SEQRES 5 A 358 ASN TYR GLU ALA ARG LYS PHE GLY VAL LYS ALA GLY ILE SEQRES 6 A 358 PRO ILE VAL GLU ALA LYS LYS ILE LEU PRO ASN ALA VAL SEQRES 7 A 358 TYR LEU PRO MET ARG LYS GLU VAL TYR GLN GLN VAL SER SEQRES 8 A 358 SER ARG ILE MET ASN LEU LEU ARG GLU TYR SER GLU LYS SEQRES 9 A 358 ILE GLU ILE ALA SER ILE ASP GLU ALA TYR LEU ASP ILE SEQRES 10 A 358 SER ASP LYS VAL ARG ASP TYR ARG GLU ALA TYR ASN LEU SEQRES 11 A 358 GLY LEU GLU ILE LYS ASN LYS ILE LEU GLU LYS GLU LYS SEQRES 12 A 358 ILE THR VAL THR VAL GLY ILE SER LYS ASN LYS VAL PHE SEQRES 13 A 358 ALA LYS ILE ALA ALA ASP MET ALA LYS PRO ASN GLY ILE SEQRES 14 A 358 LYS VAL ILE ASP ASP GLU GLU VAL LYS ARG LEU ILE ARG SEQRES 15 A 358 GLU LEU ASP ILE ALA ASP VAL PRO GLY ILE GLY ASN ILE SEQRES 16 A 358 THR ALA GLU LYS LEU LYS LYS LEU GLY ILE ASN LYS LEU SEQRES 17 A 358 VAL ASP THR LEU SER ILE GLU PHE ASP LYS LEU LYS GLY SEQRES 18 A 358 MET ILE GLY GLU ALA LYS ALA LYS TYR LEU ILE SER LEU SEQRES 19 A 358 ALA ARG ASP GLU TYR ASN GLU PRO ILE ARG THR ARG VAL SEQRES 20 A 358 ARG LYS SER ILE GLY ARG ILE VAL THR MET LYS ARG ASN SEQRES 21 A 358 SER ARG ASN LEU GLU GLU ILE LYS PRO TYR LEU PHE ARG SEQRES 22 A 358 ALA ILE GLU GLU SER TYR TYR LYS LEU ASP LYS ARG ILE SEQRES 23 A 358 PRO LYS ALA ILE HIS VAL VAL ALA VAL THR GLU ASP LEU SEQRES 24 A 358 ASP ILE VAL SER ARG GLY ARG THR PHE PRO HIS GLY ILE SEQRES 25 A 358 SER LYS GLU THR ALA TYR SER GLU SER VAL LYS LEU LEU SEQRES 26 A 358 GLN LYS ILE LEU GLU GLU ASP GLU ARG LYS ILE ARG ARG SEQRES 27 A 358 ILE GLY VAL ARG PHE SER LYS PHE ILE GLU ALA ILE GLY SEQRES 28 A 358 LEU ASP LYS PHE PHE ASP THR SEQRES 1 B 358 HIS HIS HIS HIS HIS HIS MET ILE VAL LEU PHE VAL ASP SEQRES 2 B 358 PHE ASP TYR PHE TYR ALA GLN VAL GLU GLU VAL LEU ASN SEQRES 3 B 358 PRO SER LEU LYS GLY LYS PRO VAL VAL VAL CYS VAL PHE SEQRES 4 B 358 SER GLY ARG PHE GLU ASP SER GLY ALA VAL ALA THR ALA SEQRES 5 B 358 ASN TYR GLU ALA ARG LYS PHE GLY VAL LYS ALA GLY ILE SEQRES 6 B 358 PRO ILE VAL GLU ALA LYS LYS ILE LEU PRO ASN ALA VAL SEQRES 7 B 358 TYR LEU PRO MET ARG LYS GLU VAL TYR GLN GLN VAL SER SEQRES 8 B 358 SER ARG ILE MET ASN LEU LEU ARG GLU TYR SER GLU LYS SEQRES 9 B 358 ILE GLU ILE ALA SER ILE ASP GLU ALA TYR LEU ASP ILE SEQRES 10 B 358 SER ASP LYS VAL ARG ASP TYR ARG GLU ALA TYR ASN LEU SEQRES 11 B 358 GLY LEU GLU ILE LYS ASN LYS ILE LEU GLU LYS GLU LYS SEQRES 12 B 358 ILE THR VAL THR VAL GLY ILE SER LYS ASN LYS VAL PHE SEQRES 13 B 358 ALA LYS ILE ALA ALA ASP MET ALA LYS PRO ASN GLY ILE SEQRES 14 B 358 LYS VAL ILE ASP ASP GLU GLU VAL LYS ARG LEU ILE ARG SEQRES 15 B 358 GLU LEU ASP ILE ALA ASP VAL PRO GLY ILE GLY ASN ILE SEQRES 16 B 358 THR ALA GLU LYS LEU LYS LYS LEU GLY ILE ASN LYS LEU SEQRES 17 B 358 VAL ASP THR LEU SER ILE GLU PHE ASP LYS LEU LYS GLY SEQRES 18 B 358 MET ILE GLY GLU ALA LYS ALA LYS TYR LEU ILE SER LEU SEQRES 19 B 358 ALA ARG ASP GLU TYR ASN GLU PRO ILE ARG THR ARG VAL SEQRES 20 B 358 ARG LYS SER ILE GLY ARG ILE VAL THR MET LYS ARG ASN SEQRES 21 B 358 SER ARG ASN LEU GLU GLU ILE LYS PRO TYR LEU PHE ARG SEQRES 22 B 358 ALA ILE GLU GLU SER TYR TYR LYS LEU ASP LYS ARG ILE SEQRES 23 B 358 PRO LYS ALA ILE HIS VAL VAL ALA VAL THR GLU ASP LEU SEQRES 24 B 358 ASP ILE VAL SER ARG GLY ARG THR PHE PRO HIS GLY ILE SEQRES 25 B 358 SER LYS GLU THR ALA TYR SER GLU SER VAL LYS LEU LEU SEQRES 26 B 358 GLN LYS ILE LEU GLU GLU ASP GLU ARG LYS ILE ARG ARG SEQRES 27 B 358 ILE GLY VAL ARG PHE SER LYS PHE ILE GLU ALA ILE GLY SEQRES 28 B 358 LEU ASP LYS PHE PHE ASP THR SEQRES 1 C 13 DG DG DG DG DG DA DA DG DG DA DC DT DA SEQRES 1 D 18 DT DT DC DA DG DFT DA DG DT DC DC DT DT SEQRES 2 D 18 DC DC DC DC DC SEQRES 1 E 13 DG DG DG DG DG DA DA DG DG DA DC DT DA SEQRES 1 F 18 DT DT DC DA DG DFT DA DG DT DC DC DT DT SEQRES 2 F 18 DC DC DC DC DC HET DFT D 6 20 HET DFT F 6 20 HET CA A1343 1 HET CA A1344 1 HET DCT A1345 27 HET CA A1346 1 HET CA B1343 1 HET CA B1344 1 HET CA B3002 1 HET DCT E1014 27 HETNAM DFT 1-[2-DEOXYRIBOFURANOSYL]-2,4-DIFLUORO-5-METHYL-BENZENE- HETNAM 2 DFT 5'MONOPHOSPHATE HETNAM CA CALCIUM ION HETNAM DCT 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE FORMUL 4 DFT 2(C12 H15 F2 O6 P) FORMUL 7 CA 6(CA 2+) FORMUL 9 DCT 2(C9 H16 N3 O12 P3) FORMUL 15 HOH *217(H2 O) HELIX 1 1 TYR A 10 ASN A 20 1 11 HELIX 2 2 PRO A 21 LYS A 24 5 4 HELIX 3 3 ASN A 47 LYS A 52 1 6 HELIX 4 4 PRO A 60 LEU A 68 1 9 HELIX 5 5 ARG A 77 GLU A 94 1 18 HELIX 6 6 SER A 112 LYS A 114 5 3 HELIX 7 7 TYR A 118 LYS A 137 1 20 HELIX 8 8 ASN A 147 LYS A 159 1 13 HELIX 9 9 ASP A 167 LEU A 178 1 12 HELIX 10 10 ILE A 180 VAL A 183 5 4 HELIX 11 11 GLY A 187 LYS A 196 1 10 HELIX 12 12 LEU A 202 SER A 207 5 6 HELIX 13 13 GLU A 209 LYS A 214 1 6 HELIX 14 14 GLY A 218 ARG A 230 1 13 HELIX 15 15 ASN A 257 LEU A 276 1 20 HELIX 16 16 SER A 307 ASP A 326 1 20 HELIX 17 17 TYR B 10 ASN B 20 1 11 HELIX 18 18 PRO B 21 LYS B 24 5 4 HELIX 19 19 ASN B 47 LYS B 52 1 6 HELIX 20 20 PRO B 60 LYS B 66 1 7 HELIX 21 21 ARG B 77 ARG B 93 1 17 HELIX 22 22 SER B 112 VAL B 115 5 4 HELIX 23 23 ARG B 116 LYS B 137 1 22 HELIX 24 24 ASN B 147 LYS B 159 1 13 HELIX 25 25 ASP B 167 ILE B 175 1 9 HELIX 26 26 ILE B 180 VAL B 183 5 4 HELIX 27 27 GLY B 187 LYS B 196 1 10 HELIX 28 28 VAL B 203 ILE B 208 1 6 HELIX 29 29 GLU B 209 ILE B 217 1 9 HELIX 30 30 GLY B 218 ARG B 230 1 13 HELIX 31 31 ASN B 257 ASP B 277 1 21 HELIX 32 32 SER B 307 ASP B 326 1 20 SHEET 1 AA 5 ILE A 99 SER A 103 0 SHEET 2 AA 5 GLU A 106 ASP A 110 -1 O GLU A 106 N SER A 103 SHEET 3 AA 5 VAL A 3 PHE A 8 -1 O LEU A 4 N LEU A 109 SHEET 4 AA 5 VAL A 140 SER A 145 -1 O THR A 141 N ASP A 7 SHEET 5 AA 5 ILE A 163 VAL A 165 1 O LYS A 164 N ILE A 144 SHEET 1 AB 3 ALA A 42 ALA A 46 0 SHEET 2 AB 3 VAL A 28 VAL A 32 -1 O VAL A 30 N THR A 45 SHEET 3 AB 3 VAL A 72 PRO A 75 1 O VAL A 72 N VAL A 29 SHEET 1 AC 4 SER A 244 SER A 255 0 SHEET 2 AC 4 ILE A 330 PHE A 340 -1 O ILE A 330 N SER A 255 SHEET 3 AC 4 PRO A 281 THR A 290 -1 N LYS A 282 O SER A 338 SHEET 4 AC 4 ILE A 295 THR A 301 -1 O VAL A 296 N ALA A 288 SHEET 1 BA 5 ILE B 99 ILE B 101 0 SHEET 2 BA 5 GLU B 106 ASP B 110 -1 O TYR B 108 N GLU B 100 SHEET 3 BA 5 VAL B 3 PHE B 8 -1 O LEU B 4 N LEU B 109 SHEET 4 BA 5 VAL B 140 SER B 145 -1 O THR B 141 N ASP B 7 SHEET 5 BA 5 ILE B 163 ILE B 166 1 O LYS B 164 N ILE B 144 SHEET 1 BB 3 GLY B 41 ALA B 46 0 SHEET 2 BB 3 VAL B 28 PHE B 33 -1 O VAL B 30 N ALA B 44 SHEET 3 BB 3 VAL B 72 PRO B 75 1 O VAL B 72 N VAL B 29 SHEET 1 BC 4 SER B 244 SER B 255 0 SHEET 2 BC 4 ILE B 330 ILE B 341 -1 O ILE B 330 N SER B 255 SHEET 3 BC 4 ILE B 280 THR B 290 -1 O ILE B 280 N ILE B 341 SHEET 4 BC 4 ILE B 295 THR B 301 -1 O VAL B 296 N ALA B 288 LINK O3' DG D 5 P DFT D 6 1555 1555 1.61 LINK O3' DFT D 6 P DA D 7 1555 1555 1.61 LINK O3' DG F 5 P DFT F 6 1555 1555 1.60 LINK O3' DFT F 6 P DA F 7 1555 1555 1.60 LINK OD1 ASP A 7 CA CA A1343 1555 1555 2.64 LINK O PHE A 8 CA CA A1343 1555 1555 2.45 LINK OD2 ASP A 105 CA CA A1343 1555 1555 2.95 LINK O ALA A 181 CA CA A1344 1555 1555 2.38 LINK O ILE A 186 CA CA A1344 1555 1555 2.68 LINK CA CA A1343 O2B DCT A1345 1555 1555 2.85 LINK CA CA A1343 O3B DCT A1345 1555 1555 2.92 LINK CA CA A1343 O1G DCT A1345 1555 1555 2.99 LINK CA CA A1343 O HOH A2089 1555 1555 2.67 LINK CA CA A1344 O HOH A2023 1555 1555 2.33 LINK CA CA A1344 O HOH A2048 1555 1555 2.64 LINK CA CA A1344 O HOH A2050 1555 1555 2.35 LINK CA CA A1344 O HOH C2014 1555 1555 2.90 LINK O1A DCT A1345 CA CA A1346 1555 1555 3.00 LINK CA CA A1346 O HOH A2002 1555 1555 2.99 LINK CA CA A1346 O HOH A2088 1555 1555 3.13 LINK CA CA A1346 O HOH C2017 1555 1555 2.58 LINK OD1 ASP B 7 CA CA B1343 1555 1555 2.35 LINK O PHE B 8 CA CA B1343 1555 1555 2.45 LINK OD2 ASP B 105 CA CA B1343 1555 1555 2.34 LINK O ALA B 181 CA CA B1344 1555 1555 2.42 LINK O ILE B 186 CA CA B1344 1555 1555 2.61 LINK CA CA B1343 O HOH B2037 1555 1555 2.70 LINK CA CA B1343 O3B DCT E1014 1555 1555 2.66 LINK CA CA B1343 O2B DCT E1014 1555 1555 3.08 LINK CA CA B1344 O HOH B2053 1555 1555 2.50 LINK CA CA B1344 O HOH B2054 1555 1555 2.46 LINK CA CA B1344 O HOH B2055 1555 1555 2.71 LINK O HOH B2049 CA CA B3002 1555 1555 2.82 LINK CA CA B3002 O1A DCT E1014 1555 1555 2.24 LINK CA CA B3002 O HOH E2010 1555 1555 3.05 CISPEP 1 LYS A 159 PRO A 160 0 -0.05 CISPEP 2 LYS B 159 PRO B 160 0 0.13 SITE 1 AC1 5 ASP A 7 PHE A 8 ASP A 105 DCT A1345 SITE 2 AC1 5 HOH A2089 SITE 1 AC2 6 ALA A 181 ILE A 186 HOH A2023 HOH A2048 SITE 2 AC2 6 HOH A2050 HOH C2014 SITE 1 AC3 21 ASP A 7 TYR A 10 ALA A 44 THR A 45 SITE 2 AC3 21 TYR A 48 ARG A 51 ALA A 57 GLY A 58 SITE 3 AC3 21 ASP A 105 LYS A 159 CA A1343 CA A1346 SITE 4 AC3 21 HOH A2002 HOH A2003 HOH A2006 HOH A2014 SITE 5 AC3 21 HOH A2088 HOH A2089 HOH A2090 DA C 13 SITE 6 AC3 21 DG D 5 SITE 1 AC4 3 DCT A1345 HOH A2002 HOH C2017 SITE 1 AC5 3 HOH B2049 DCT E1014 HOH E2010 SITE 1 AC6 5 ASP B 7 PHE B 8 ASP B 105 HOH B2037 SITE 2 AC6 5 DCT E1014 SITE 1 AC7 5 ALA B 181 ILE B 186 HOH B2053 HOH B2054 SITE 2 AC7 5 HOH B2055 SITE 1 AC8 15 ASP B 7 PHE B 8 TYR B 10 THR B 45 SITE 2 AC8 15 TYR B 48 ARG B 51 ASP B 105 LYS B 159 SITE 3 AC8 15 CA B1343 CA B3002 DA E 13 HOH E2009 SITE 4 AC8 15 HOH E2010 HOH E2011 DG F 5 CRYST1 52.139 101.875 111.062 90.00 94.92 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019180 0.000000 0.001651 0.00000 SCALE2 0.000000 0.009816 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009037 0.00000