data_2VCL # _entry.id 2VCL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2VCL PDBE EBI-33970 WWPDB D_1290033970 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2VCK unspecified 'STRUCTURE OF THE PHYCOERYTHROBILIN SYNTHASE PEBS FROM THE CYANOPHAGE P-SSM2 IN COMPLEX WITH THE BOUND SUBSTRATE BILIVERDIN IXA' PDB 2VGR unspecified 'STRUCTURE OF THE WT-PHYCOERYTHROBILIN SYNTHASE PEBS FROM THE CYANOPHAGE P-SSM2 IN COMPLEX WITH THE BOUND SUBSTRATE BILIVERDIN IXA' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VCL _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-09-25 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dammeyer, T.' 1 'Hofmann, E.' 2 'Frankenberg-Dinkel, N.' 3 # _citation.id primary _citation.title 'Phycoerythrobilin Synthase (Pebs) of a Marine Virus: Crystal Structures of the Biliverdin Complex and the Substrate-Free Form.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 283 _citation.page_first 27547 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18662988 _citation.pdbx_database_id_DOI 10.1074/JBC.M803765200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Dammeyer, T.' 1 ? primary 'Hofmann, E.' 2 ? primary 'Frankenberg-Dinkel, N.' 3 ? # _cell.entry_id 2VCL _cell.length_a 42.500 _cell.length_b 72.470 _cell.length_c 90.940 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VCL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CYANOBACTERIAL PHYCOERYTHROBILIN' 27621.107 1 1.3.7.6 ? ? ? 2 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 3 water nat water 18.015 225 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PHYCOBILIN REDUCTASE, CYANOPHAGE PHYCOERYTHROBILIN SYNTHASE PEBS' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)TKNPRNNKPKKILDSSYKSKTIWQNYIDALFETFPQLEISEVWAKWDGGNVTKDGGDAKLTANIRTGEHFLKARE AHIVDPNSDIYNTILYPKTGADLPCFG(MSE)DL(MSE)KFSDKKVIIVFDFQHPREKYLFSVDGLPEDDGKYRFFE (MSE)GNHFSKNIFVRYCKPDEVDQYLDTFKLYLTKYKE(MSE)IDNNKPVGEDTTVYSDFDTY(MSE)TELDPVRGY (MSE)KNKFGEGRSEAFVNDFLFSYK ; _entity_poly.pdbx_seq_one_letter_code_can ;MTKNPRNNKPKKILDSSYKSKTIWQNYIDALFETFPQLEISEVWAKWDGGNVTKDGGDAKLTANIRTGEHFLKAREAHIV DPNSDIYNTILYPKTGADLPCFGMDLMKFSDKKVIIVFDFQHPREKYLFSVDGLPEDDGKYRFFEMGNHFSKNIFVRYCK PDEVDQYLDTFKLYLTKYKEMIDNNKPVGEDTTVYSDFDTYMTELDPVRGYMKNKFGEGRSEAFVNDFLFSYK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 THR n 1 3 LYS n 1 4 ASN n 1 5 PRO n 1 6 ARG n 1 7 ASN n 1 8 ASN n 1 9 LYS n 1 10 PRO n 1 11 LYS n 1 12 LYS n 1 13 ILE n 1 14 LEU n 1 15 ASP n 1 16 SER n 1 17 SER n 1 18 TYR n 1 19 LYS n 1 20 SER n 1 21 LYS n 1 22 THR n 1 23 ILE n 1 24 TRP n 1 25 GLN n 1 26 ASN n 1 27 TYR n 1 28 ILE n 1 29 ASP n 1 30 ALA n 1 31 LEU n 1 32 PHE n 1 33 GLU n 1 34 THR n 1 35 PHE n 1 36 PRO n 1 37 GLN n 1 38 LEU n 1 39 GLU n 1 40 ILE n 1 41 SER n 1 42 GLU n 1 43 VAL n 1 44 TRP n 1 45 ALA n 1 46 LYS n 1 47 TRP n 1 48 ASP n 1 49 GLY n 1 50 GLY n 1 51 ASN n 1 52 VAL n 1 53 THR n 1 54 LYS n 1 55 ASP n 1 56 GLY n 1 57 GLY n 1 58 ASP n 1 59 ALA n 1 60 LYS n 1 61 LEU n 1 62 THR n 1 63 ALA n 1 64 ASN n 1 65 ILE n 1 66 ARG n 1 67 THR n 1 68 GLY n 1 69 GLU n 1 70 HIS n 1 71 PHE n 1 72 LEU n 1 73 LYS n 1 74 ALA n 1 75 ARG n 1 76 GLU n 1 77 ALA n 1 78 HIS n 1 79 ILE n 1 80 VAL n 1 81 ASP n 1 82 PRO n 1 83 ASN n 1 84 SER n 1 85 ASP n 1 86 ILE n 1 87 TYR n 1 88 ASN n 1 89 THR n 1 90 ILE n 1 91 LEU n 1 92 TYR n 1 93 PRO n 1 94 LYS n 1 95 THR n 1 96 GLY n 1 97 ALA n 1 98 ASP n 1 99 LEU n 1 100 PRO n 1 101 CYS n 1 102 PHE n 1 103 GLY n 1 104 MSE n 1 105 ASP n 1 106 LEU n 1 107 MSE n 1 108 LYS n 1 109 PHE n 1 110 SER n 1 111 ASP n 1 112 LYS n 1 113 LYS n 1 114 VAL n 1 115 ILE n 1 116 ILE n 1 117 VAL n 1 118 PHE n 1 119 ASP n 1 120 PHE n 1 121 GLN n 1 122 HIS n 1 123 PRO n 1 124 ARG n 1 125 GLU n 1 126 LYS n 1 127 TYR n 1 128 LEU n 1 129 PHE n 1 130 SER n 1 131 VAL n 1 132 ASP n 1 133 GLY n 1 134 LEU n 1 135 PRO n 1 136 GLU n 1 137 ASP n 1 138 ASP n 1 139 GLY n 1 140 LYS n 1 141 TYR n 1 142 ARG n 1 143 PHE n 1 144 PHE n 1 145 GLU n 1 146 MSE n 1 147 GLY n 1 148 ASN n 1 149 HIS n 1 150 PHE n 1 151 SER n 1 152 LYS n 1 153 ASN n 1 154 ILE n 1 155 PHE n 1 156 VAL n 1 157 ARG n 1 158 TYR n 1 159 CYS n 1 160 LYS n 1 161 PRO n 1 162 ASP n 1 163 GLU n 1 164 VAL n 1 165 ASP n 1 166 GLN n 1 167 TYR n 1 168 LEU n 1 169 ASP n 1 170 THR n 1 171 PHE n 1 172 LYS n 1 173 LEU n 1 174 TYR n 1 175 LEU n 1 176 THR n 1 177 LYS n 1 178 TYR n 1 179 LYS n 1 180 GLU n 1 181 MSE n 1 182 ILE n 1 183 ASP n 1 184 ASN n 1 185 ASN n 1 186 LYS n 1 187 PRO n 1 188 VAL n 1 189 GLY n 1 190 GLU n 1 191 ASP n 1 192 THR n 1 193 THR n 1 194 VAL n 1 195 TYR n 1 196 SER n 1 197 ASP n 1 198 PHE n 1 199 ASP n 1 200 THR n 1 201 TYR n 1 202 MSE n 1 203 THR n 1 204 GLU n 1 205 LEU n 1 206 ASP n 1 207 PRO n 1 208 VAL n 1 209 ARG n 1 210 GLY n 1 211 TYR n 1 212 MSE n 1 213 LYS n 1 214 ASN n 1 215 LYS n 1 216 PHE n 1 217 GLY n 1 218 GLU n 1 219 GLY n 1 220 ARG n 1 221 SER n 1 222 GLU n 1 223 ALA n 1 224 PHE n 1 225 VAL n 1 226 ASN n 1 227 ASP n 1 228 PHE n 1 229 LEU n 1 230 PHE n 1 231 SER n 1 232 TYR n 1 233 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PROCHLOROCOCCUS PHAGE P-SSM2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 268746 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX-6P-3 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q58MU6_9CAUD _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q58MU6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2VCL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 233 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q58MU6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 233 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 233 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VCL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.7 _exptl_crystal.density_percent_sol 54 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;SITTING DROP VAPOUR DIFFUSION PROTEIN:RESERVOIR 1:1 PROTEIN: 10.5MG/ML PROTEIN, 0.025MM TES/KOH PH 8.0 RESERVOIR: 17% PEG4000, 8.5% ISOPROPANOL, 15% GLYCEROL, 0.085M HEPES PH 8.5 ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2007-06-30 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9826 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 0.9826 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VCL _reflns.observed_criterion_sigma_I 4.9 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.00 _reflns.d_resolution_high 1.55 _reflns.number_obs 41020 _reflns.number_all ? _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 34.10 _reflns.B_iso_Wilson_estimate 23.20 _reflns.pdbx_redundancy 26.3 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.60 _reflns_shell.percent_possible_all 90.2 _reflns_shell.Rmerge_I_obs 0.64 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.90 _reflns_shell.pdbx_redundancy 14.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VCL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 38986 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.52 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 98.7 _refine.ls_R_factor_obs 0.174 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.173 _refine.ls_R_factor_R_free 0.194 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 2052 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.952 _refine.B_iso_mean 17.00 _refine.aniso_B[1][1] 0.86000 _refine.aniso_B[2][2] -0.48000 _refine.aniso_B[3][3] -0.38000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.069 _refine.pdbx_overall_ESU_R_Free 0.069 _refine.overall_SU_ML 0.042 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.136 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1703 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 225 _refine_hist.number_atoms_total 1946 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 38.52 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.022 ? 1798 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.726 1.949 ? 2429 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.477 5.000 ? 212 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.251 24.479 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.268 15.000 ? 304 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.464 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.113 0.200 ? 246 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.020 ? 1397 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.200 ? 797 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.319 0.200 ? 1235 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.135 0.200 ? 201 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.199 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.151 0.200 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.433 1.500 ? 1063 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.938 2.000 ? 1685 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.313 3.000 ? 841 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.338 4.500 ? 741 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.59 _refine_ls_shell.number_reflns_R_work 2557 _refine_ls_shell.R_factor_R_work 0.2130 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2330 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 134 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VCL _struct.title 'Structure of Phycoerythrobilin Synthase PebS from the Cyanophage P-SSM2 in the substrate free form' _struct.pdbx_descriptor 'CYANOBACTERIAL PHYCOERYTHROBILIN (E.C.1.3.7.6)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VCL _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;CYANOPHAGES, BILIVERDIN IXA, OXIDOREDUCTASE, PHYCOBILIN REDUCTASE, PHYCOBILIN SYNTHESIS, PROCHLOROCOCCUS, PHYCOERYTHROBILIN, BILIVERDIN REDUCTASE, FERREDOXIN DEPENDENT ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 24 ? PHE A 35 ? TRP A 24 PHE A 35 1 ? 12 HELX_P HELX_P2 2 LYS A 160 ? GLN A 166 ? LYS A 160 GLN A 166 5 ? 7 HELX_P HELX_P3 3 TYR A 167 ? LYS A 186 ? TYR A 167 LYS A 186 1 ? 20 HELX_P HELX_P4 4 ASP A 191 ? VAL A 194 ? ASP A 191 VAL A 194 5 ? 4 HELX_P HELX_P5 5 TYR A 195 ? LEU A 205 ? TYR A 195 LEU A 205 1 ? 11 HELX_P HELX_P6 6 ARG A 209 ? GLY A 217 ? ARG A 209 GLY A 217 1 ? 9 HELX_P HELX_P7 7 GLY A 217 ? PHE A 228 ? GLY A 217 PHE A 228 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A GLY 103 C ? ? ? 1_555 A MSE 104 N ? ? A GLY 103 A MSE 104 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale both ? A MSE 104 C ? ? ? 1_555 A ASP 105 N ? ? A MSE 104 A ASP 105 1_555 ? ? ? ? ? ? ? 1.313 ? covale3 covale both ? A LEU 106 C ? ? ? 1_555 A MSE 107 N ? ? A LEU 106 A MSE 107 1_555 ? ? ? ? ? ? ? 1.350 ? covale4 covale both ? A MSE 107 C ? ? ? 1_555 A LYS 108 N ? ? A MSE 107 A LYS 108 1_555 ? ? ? ? ? ? ? 1.317 ? covale5 covale both ? A GLU 145 C ? ? ? 1_555 A MSE 146 N ? ? A GLU 145 A MSE 146 1_555 ? ? ? ? ? ? ? 1.320 ? covale6 covale both ? A MSE 146 C ? ? ? 1_555 A GLY 147 N ? ? A MSE 146 A GLY 147 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale both ? A GLU 180 C ? ? ? 1_555 A MSE 181 N ? ? A GLU 180 A MSE 181 1_555 ? ? ? ? ? ? ? 1.338 ? covale8 covale both ? A MSE 181 C ? ? ? 1_555 A ILE 182 N ? ? A MSE 181 A ILE 182 1_555 ? ? ? ? ? ? ? 1.322 ? covale9 covale both ? A TYR 201 C ? ? ? 1_555 A MSE 202 N ? ? A TYR 201 A MSE 202 1_555 ? ? ? ? ? ? ? 1.325 ? covale10 covale both ? A MSE 202 C ? ? ? 1_555 A THR 203 N ? ? A MSE 202 A THR 203 1_555 ? ? ? ? ? ? ? 1.323 ? covale11 covale both ? A TYR 211 C ? ? ? 1_555 A MSE 212 N ? ? A TYR 211 A MSE 212 1_555 ? ? ? ? ? ? ? 1.334 ? covale12 covale both ? A MSE 212 C ? ? ? 1_555 A LYS 213 N ? ? A MSE 212 A LYS 213 1_555 ? ? ? ? ? ? ? 1.333 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLU A 39 ? GLY A 49 ? GLU A 39 GLY A 49 AA 2 ALA A 59 ? GLY A 68 ? ALA A 59 GLY A 68 AA 3 PHE A 71 ? ASP A 81 ? PHE A 71 ASP A 81 AA 4 SER A 84 ? PRO A 93 ? SER A 84 PRO A 93 AA 5 CYS A 101 ? SER A 110 ? CYS A 101 SER A 110 AA 6 LYS A 113 ? GLN A 121 ? LYS A 113 GLN A 121 AA 7 PHE A 155 ? CYS A 159 ? PHE A 155 CYS A 159 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLY A 49 ? N GLY A 49 O ALA A 59 ? O ALA A 59 AA 2 3 N GLY A 68 ? N GLY A 68 O PHE A 71 ? O PHE A 71 AA 3 4 N ASP A 81 ? N ASP A 81 O SER A 84 ? O SER A 84 AA 4 5 N LEU A 91 ? N LEU A 91 O PHE A 102 ? O PHE A 102 AA 5 6 N PHE A 109 ? N PHE A 109 O LYS A 113 ? O LYS A 113 AA 6 7 N PHE A 118 ? N PHE A 118 O PHE A 155 ? O PHE A 155 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE GOL A1234' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A1235' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A1236' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 LYS A 113 ? LYS A 113 . ? 1_555 ? 2 AC1 10 PHE A 143 ? PHE A 143 . ? 1_555 ? 3 AC1 10 TYR A 158 ? TYR A 158 . ? 1_555 ? 4 AC1 10 LEU A 168 ? LEU A 168 . ? 1_555 ? 5 AC1 10 ASP A 169 ? ASP A 169 . ? 1_555 ? 6 AC1 10 LYS A 172 ? LYS A 172 . ? 1_555 ? 7 AC1 10 HOH E . ? HOH A 2140 . ? 1_555 ? 8 AC1 10 HOH E . ? HOH A 2162 . ? 1_555 ? 9 AC1 10 HOH E . ? HOH A 2223 . ? 1_555 ? 10 AC1 10 HOH E . ? HOH A 2224 . ? 1_555 ? 11 AC2 4 ILE A 86 ? ILE A 86 . ? 1_555 ? 12 AC2 4 ASN A 88 ? ASN A 88 . ? 1_555 ? 13 AC2 4 ASP A 105 ? ASP A 105 . ? 1_555 ? 14 AC2 4 PHE A 224 ? PHE A 224 . ? 1_555 ? 15 AC3 5 GLY A 103 ? GLY A 103 . ? 1_555 ? 16 AC3 5 MSE A 104 ? MSE A 104 . ? 1_555 ? 17 AC3 5 GLN A 121 ? GLN A 121 . ? 1_555 ? 18 AC3 5 MSE A 202 ? MSE A 202 . ? 1_555 ? 19 AC3 5 HOH E . ? HOH A 2225 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VCL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VCL _atom_sites.fract_transf_matrix[1][1] 0.023529 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013799 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010996 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ASN 4 4 ? ? ? A . n A 1 5 PRO 5 5 ? ? ? A . n A 1 6 ARG 6 6 ? ? ? A . n A 1 7 ASN 7 7 ? ? ? A . n A 1 8 ASN 8 8 ? ? ? A . n A 1 9 LYS 9 9 ? ? ? A . n A 1 10 PRO 10 10 ? ? ? A . n A 1 11 LYS 11 11 ? ? ? A . n A 1 12 LYS 12 12 ? ? ? A . n A 1 13 ILE 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 ASP 15 15 ? ? ? A . n A 1 16 SER 16 16 ? ? ? A . n A 1 17 SER 17 17 ? ? ? A . n A 1 18 TYR 18 18 ? ? ? A . n A 1 19 LYS 19 19 ? ? ? A . n A 1 20 SER 20 20 ? ? ? A . n A 1 21 LYS 21 21 ? ? ? A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 TRP 24 24 24 TRP TRP A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 TRP 44 44 44 TRP TRP A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 TRP 47 47 47 TRP TRP A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 VAL 52 52 ? ? ? A . n A 1 53 THR 53 53 ? ? ? A . n A 1 54 LYS 54 54 ? ? ? A . n A 1 55 ASP 55 55 ? ? ? A . n A 1 56 GLY 56 56 ? ? ? A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 CYS 101 101 101 CYS CYS A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 MSE 104 104 104 MSE MSE A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 MSE 107 107 107 MSE MSE A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 PHE 118 118 118 PHE PHE A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 HIS 122 122 122 HIS HIS A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 PRO 135 135 135 PRO PRO A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 MSE 146 146 146 MSE MSE A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 SER 151 151 151 SER SER A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 ILE 154 154 154 ILE ILE A . n A 1 155 PHE 155 155 155 PHE PHE A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 CYS 159 159 159 CYS CYS A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 GLN 166 166 166 GLN GLN A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 TYR 174 174 174 TYR TYR A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 LYS 177 177 177 LYS LYS A . n A 1 178 TYR 178 178 178 TYR TYR A . n A 1 179 LYS 179 179 179 LYS LYS A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 MSE 181 181 181 MSE MSE A . n A 1 182 ILE 182 182 182 ILE ILE A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 ASN 184 184 184 ASN ASN A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 LYS 186 186 186 LYS LYS A . n A 1 187 PRO 187 187 187 PRO PRO A . n A 1 188 VAL 188 188 188 VAL VAL A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 THR 193 193 193 THR THR A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 TYR 195 195 195 TYR TYR A . n A 1 196 SER 196 196 196 SER SER A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 PHE 198 198 198 PHE PHE A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 TYR 201 201 201 TYR TYR A . n A 1 202 MSE 202 202 202 MSE MSE A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ASP 206 206 ? ? ? A . n A 1 207 PRO 207 207 ? ? ? A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 ARG 209 209 209 ARG ARG A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 TYR 211 211 211 TYR TYR A . n A 1 212 MSE 212 212 212 MSE MSE A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 ASN 214 214 214 ASN ASN A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 PHE 216 216 216 PHE PHE A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 GLU 222 222 222 GLU GLU A . n A 1 223 ALA 223 223 223 ALA ALA A . n A 1 224 PHE 224 224 224 PHE PHE A . n A 1 225 VAL 225 225 225 VAL VAL A . n A 1 226 ASN 226 226 226 ASN ASN A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 PHE 228 228 228 PHE PHE A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 SER 231 231 231 SER SER A . n A 1 232 TYR 232 232 232 TYR TYR A . n A 1 233 LYS 233 233 233 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 1234 1234 GOL GOL A . C 2 GOL 1 1235 1235 GOL GOL A . D 2 GOL 1 1236 1236 GOL GOL A . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . E 3 HOH 33 2033 2033 HOH HOH A . E 3 HOH 34 2034 2034 HOH HOH A . E 3 HOH 35 2035 2035 HOH HOH A . E 3 HOH 36 2036 2036 HOH HOH A . E 3 HOH 37 2037 2037 HOH HOH A . E 3 HOH 38 2038 2038 HOH HOH A . E 3 HOH 39 2039 2039 HOH HOH A . E 3 HOH 40 2040 2040 HOH HOH A . E 3 HOH 41 2041 2041 HOH HOH A . E 3 HOH 42 2042 2042 HOH HOH A . E 3 HOH 43 2043 2043 HOH HOH A . E 3 HOH 44 2044 2044 HOH HOH A . E 3 HOH 45 2045 2045 HOH HOH A . E 3 HOH 46 2046 2046 HOH HOH A . E 3 HOH 47 2047 2047 HOH HOH A . E 3 HOH 48 2048 2048 HOH HOH A . E 3 HOH 49 2049 2049 HOH HOH A . E 3 HOH 50 2050 2050 HOH HOH A . E 3 HOH 51 2051 2051 HOH HOH A . E 3 HOH 52 2052 2052 HOH HOH A . E 3 HOH 53 2053 2053 HOH HOH A . E 3 HOH 54 2054 2054 HOH HOH A . E 3 HOH 55 2055 2055 HOH HOH A . E 3 HOH 56 2056 2056 HOH HOH A . E 3 HOH 57 2057 2057 HOH HOH A . E 3 HOH 58 2058 2058 HOH HOH A . E 3 HOH 59 2059 2059 HOH HOH A . E 3 HOH 60 2060 2060 HOH HOH A . E 3 HOH 61 2061 2061 HOH HOH A . E 3 HOH 62 2062 2062 HOH HOH A . E 3 HOH 63 2063 2063 HOH HOH A . E 3 HOH 64 2064 2064 HOH HOH A . E 3 HOH 65 2065 2065 HOH HOH A . E 3 HOH 66 2066 2066 HOH HOH A . E 3 HOH 67 2067 2067 HOH HOH A . E 3 HOH 68 2068 2068 HOH HOH A . E 3 HOH 69 2069 2069 HOH HOH A . E 3 HOH 70 2070 2070 HOH HOH A . E 3 HOH 71 2071 2071 HOH HOH A . E 3 HOH 72 2072 2072 HOH HOH A . E 3 HOH 73 2073 2073 HOH HOH A . E 3 HOH 74 2074 2074 HOH HOH A . E 3 HOH 75 2075 2075 HOH HOH A . E 3 HOH 76 2076 2076 HOH HOH A . E 3 HOH 77 2077 2077 HOH HOH A . E 3 HOH 78 2078 2078 HOH HOH A . E 3 HOH 79 2079 2079 HOH HOH A . E 3 HOH 80 2080 2080 HOH HOH A . E 3 HOH 81 2081 2081 HOH HOH A . E 3 HOH 82 2082 2082 HOH HOH A . E 3 HOH 83 2083 2083 HOH HOH A . E 3 HOH 84 2084 2084 HOH HOH A . E 3 HOH 85 2085 2085 HOH HOH A . E 3 HOH 86 2086 2086 HOH HOH A . E 3 HOH 87 2087 2087 HOH HOH A . E 3 HOH 88 2088 2088 HOH HOH A . E 3 HOH 89 2089 2089 HOH HOH A . E 3 HOH 90 2090 2090 HOH HOH A . E 3 HOH 91 2091 2091 HOH HOH A . E 3 HOH 92 2092 2092 HOH HOH A . E 3 HOH 93 2093 2093 HOH HOH A . E 3 HOH 94 2094 2094 HOH HOH A . E 3 HOH 95 2095 2095 HOH HOH A . E 3 HOH 96 2096 2096 HOH HOH A . E 3 HOH 97 2097 2097 HOH HOH A . E 3 HOH 98 2098 2098 HOH HOH A . E 3 HOH 99 2099 2099 HOH HOH A . E 3 HOH 100 2100 2100 HOH HOH A . E 3 HOH 101 2101 2101 HOH HOH A . E 3 HOH 102 2102 2102 HOH HOH A . E 3 HOH 103 2103 2103 HOH HOH A . E 3 HOH 104 2104 2104 HOH HOH A . E 3 HOH 105 2105 2105 HOH HOH A . E 3 HOH 106 2106 2106 HOH HOH A . E 3 HOH 107 2107 2107 HOH HOH A . E 3 HOH 108 2108 2108 HOH HOH A . E 3 HOH 109 2109 2109 HOH HOH A . E 3 HOH 110 2110 2110 HOH HOH A . E 3 HOH 111 2111 2111 HOH HOH A . E 3 HOH 112 2112 2112 HOH HOH A . E 3 HOH 113 2113 2113 HOH HOH A . E 3 HOH 114 2114 2114 HOH HOH A . E 3 HOH 115 2115 2115 HOH HOH A . E 3 HOH 116 2116 2116 HOH HOH A . E 3 HOH 117 2117 2117 HOH HOH A . E 3 HOH 118 2118 2118 HOH HOH A . E 3 HOH 119 2119 2119 HOH HOH A . E 3 HOH 120 2120 2120 HOH HOH A . E 3 HOH 121 2121 2121 HOH HOH A . E 3 HOH 122 2122 2122 HOH HOH A . E 3 HOH 123 2123 2123 HOH HOH A . E 3 HOH 124 2124 2124 HOH HOH A . E 3 HOH 125 2125 2125 HOH HOH A . E 3 HOH 126 2126 2126 HOH HOH A . E 3 HOH 127 2127 2127 HOH HOH A . E 3 HOH 128 2128 2128 HOH HOH A . E 3 HOH 129 2129 2129 HOH HOH A . E 3 HOH 130 2130 2130 HOH HOH A . E 3 HOH 131 2131 2131 HOH HOH A . E 3 HOH 132 2132 2132 HOH HOH A . E 3 HOH 133 2133 2133 HOH HOH A . E 3 HOH 134 2134 2134 HOH HOH A . E 3 HOH 135 2135 2135 HOH HOH A . E 3 HOH 136 2136 2136 HOH HOH A . E 3 HOH 137 2137 2137 HOH HOH A . E 3 HOH 138 2138 2138 HOH HOH A . E 3 HOH 139 2139 2139 HOH HOH A . E 3 HOH 140 2140 2140 HOH HOH A . E 3 HOH 141 2141 2141 HOH HOH A . E 3 HOH 142 2142 2142 HOH HOH A . E 3 HOH 143 2143 2143 HOH HOH A . E 3 HOH 144 2144 2144 HOH HOH A . E 3 HOH 145 2145 2145 HOH HOH A . E 3 HOH 146 2146 2146 HOH HOH A . E 3 HOH 147 2147 2147 HOH HOH A . E 3 HOH 148 2148 2148 HOH HOH A . E 3 HOH 149 2149 2149 HOH HOH A . E 3 HOH 150 2150 2150 HOH HOH A . E 3 HOH 151 2151 2151 HOH HOH A . E 3 HOH 152 2152 2152 HOH HOH A . E 3 HOH 153 2153 2153 HOH HOH A . E 3 HOH 154 2154 2154 HOH HOH A . E 3 HOH 155 2155 2155 HOH HOH A . E 3 HOH 156 2156 2156 HOH HOH A . E 3 HOH 157 2157 2157 HOH HOH A . E 3 HOH 158 2158 2158 HOH HOH A . E 3 HOH 159 2159 2159 HOH HOH A . E 3 HOH 160 2160 2160 HOH HOH A . E 3 HOH 161 2161 2161 HOH HOH A . E 3 HOH 162 2162 2162 HOH HOH A . E 3 HOH 163 2163 2163 HOH HOH A . E 3 HOH 164 2164 2164 HOH HOH A . E 3 HOH 165 2165 2165 HOH HOH A . E 3 HOH 166 2166 2166 HOH HOH A . E 3 HOH 167 2167 2167 HOH HOH A . E 3 HOH 168 2168 2168 HOH HOH A . E 3 HOH 169 2169 2169 HOH HOH A . E 3 HOH 170 2170 2170 HOH HOH A . E 3 HOH 171 2171 2171 HOH HOH A . E 3 HOH 172 2172 2172 HOH HOH A . E 3 HOH 173 2173 2173 HOH HOH A . E 3 HOH 174 2174 2174 HOH HOH A . E 3 HOH 175 2175 2175 HOH HOH A . E 3 HOH 176 2176 2176 HOH HOH A . E 3 HOH 177 2177 2177 HOH HOH A . E 3 HOH 178 2178 2178 HOH HOH A . E 3 HOH 179 2179 2179 HOH HOH A . E 3 HOH 180 2180 2180 HOH HOH A . E 3 HOH 181 2181 2181 HOH HOH A . E 3 HOH 182 2182 2182 HOH HOH A . E 3 HOH 183 2183 2183 HOH HOH A . E 3 HOH 184 2184 2184 HOH HOH A . E 3 HOH 185 2185 2185 HOH HOH A . E 3 HOH 186 2186 2186 HOH HOH A . E 3 HOH 187 2187 2187 HOH HOH A . E 3 HOH 188 2188 2188 HOH HOH A . E 3 HOH 189 2189 2189 HOH HOH A . E 3 HOH 190 2190 2190 HOH HOH A . E 3 HOH 191 2191 2191 HOH HOH A . E 3 HOH 192 2192 2192 HOH HOH A . E 3 HOH 193 2193 2193 HOH HOH A . E 3 HOH 194 2194 2194 HOH HOH A . E 3 HOH 195 2195 2195 HOH HOH A . E 3 HOH 196 2196 2196 HOH HOH A . E 3 HOH 197 2197 2197 HOH HOH A . E 3 HOH 198 2198 2198 HOH HOH A . E 3 HOH 199 2199 2199 HOH HOH A . E 3 HOH 200 2200 2200 HOH HOH A . E 3 HOH 201 2201 2201 HOH HOH A . E 3 HOH 202 2202 2202 HOH HOH A . E 3 HOH 203 2203 2203 HOH HOH A . E 3 HOH 204 2204 2204 HOH HOH A . E 3 HOH 205 2205 2205 HOH HOH A . E 3 HOH 206 2206 2206 HOH HOH A . E 3 HOH 207 2207 2207 HOH HOH A . E 3 HOH 208 2208 2208 HOH HOH A . E 3 HOH 209 2209 2209 HOH HOH A . E 3 HOH 210 2210 2210 HOH HOH A . E 3 HOH 211 2211 2211 HOH HOH A . E 3 HOH 212 2212 2212 HOH HOH A . E 3 HOH 213 2213 2213 HOH HOH A . E 3 HOH 214 2214 2214 HOH HOH A . E 3 HOH 215 2215 2215 HOH HOH A . E 3 HOH 216 2216 2216 HOH HOH A . E 3 HOH 217 2217 2217 HOH HOH A . E 3 HOH 218 2218 2218 HOH HOH A . E 3 HOH 219 2219 2219 HOH HOH A . E 3 HOH 220 2220 2220 HOH HOH A . E 3 HOH 221 2221 2221 HOH HOH A . E 3 HOH 222 2222 2222 HOH HOH A . E 3 HOH 223 2223 2223 HOH HOH A . E 3 HOH 224 2224 2224 HOH HOH A . E 3 HOH 225 2225 2225 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 104 A MSE 104 ? MET SELENOMETHIONINE 2 A MSE 107 A MSE 107 ? MET SELENOMETHIONINE 3 A MSE 146 A MSE 146 ? MET SELENOMETHIONINE 4 A MSE 181 A MSE 181 ? MET SELENOMETHIONINE 5 A MSE 202 A MSE 202 ? MET SELENOMETHIONINE 6 A MSE 212 A MSE 212 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-05 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-06-28 5 'Structure model' 1 4 2019-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Experimental preparation' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' exptl_crystal_grow 3 5 'Structure model' pdbx_seq_map_depositor_info 4 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_exptl_crystal_grow.method' 3 5 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data reduction' . ? 1 XSCALE 'data scaling' . ? 2 HKL2MAP phasing . ? 3 ARP/wARP phasing . ? 4 REFMAC refinement 5.2.0019 ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2086 ? ? O A HOH 2197 ? ? 2.18 2 1 OE1 A GLU 204 ? ? O A HOH 2200 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 48 ? ? CG A ASP 48 ? ? OD2 A ASP 48 ? ? 112.75 118.30 -5.55 0.90 N 2 1 NE A ARG 66 ? ? CZ A ARG 66 ? ? NH2 A ARG 66 ? ? 117.20 120.30 -3.10 0.50 N 3 1 CB A MSE 146 ? ? CG A MSE 146 ? ? SE A MSE 146 ? ? 93.26 112.70 -19.44 3.00 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 70 ? ? 82.71 -7.63 2 1 PHE A 228 ? ? -126.62 -54.89 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ASN 4 ? A ASN 4 5 1 Y 1 A PRO 5 ? A PRO 5 6 1 Y 1 A ARG 6 ? A ARG 6 7 1 Y 1 A ASN 7 ? A ASN 7 8 1 Y 1 A ASN 8 ? A ASN 8 9 1 Y 1 A LYS 9 ? A LYS 9 10 1 Y 1 A PRO 10 ? A PRO 10 11 1 Y 1 A LYS 11 ? A LYS 11 12 1 Y 1 A LYS 12 ? A LYS 12 13 1 Y 1 A ILE 13 ? A ILE 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A ASP 15 ? A ASP 15 16 1 Y 1 A SER 16 ? A SER 16 17 1 Y 1 A SER 17 ? A SER 17 18 1 Y 1 A TYR 18 ? A TYR 18 19 1 Y 1 A LYS 19 ? A LYS 19 20 1 Y 1 A SER 20 ? A SER 20 21 1 Y 1 A LYS 21 ? A LYS 21 22 1 Y 1 A VAL 52 ? A VAL 52 23 1 Y 1 A THR 53 ? A THR 53 24 1 Y 1 A LYS 54 ? A LYS 54 25 1 Y 1 A ASP 55 ? A ASP 55 26 1 Y 1 A GLY 56 ? A GLY 56 27 1 Y 1 A ASP 206 ? A ASP 206 28 1 Y 1 A PRO 207 ? A PRO 207 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #