data_2VEJ # _entry.id 2VEJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2VEJ PDBE EBI-34212 WWPDB D_1290034212 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2008-03-18 _pdbx_database_PDB_obs_spr.pdb_id 2VNQ _pdbx_database_PDB_obs_spr.replace_pdb_id 2VEJ _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1NFS unspecified 'STRUCTURE AND MECHANISM OF ACTION OFISOPENTENYLPYROPHOSPHATE- DIMETHYLALLYLPYROPHOSPHATEISOMERASE: COMPLEX WITH NIPP' PDB 1Q54 unspecified ;STRUCTURE AND MECHANISM OF ACTION OFISOPENTENYLPYROPHOSPHATE- DIMETHYLALLYLPYROPHOSPHATEISOMERASE: COMPLEX WITH THE BROMOHYDRINE OF IPP ; PDB 1PPV unspecified 'ISOPENTENYLPYROPHOSPHATE- DIMETHYLALLYLPYROPHOSPHATEISOMERASE IN COMPLEX WITH THE BROMOHYDRINE OF IPP' PDB 1OW2 unspecified 'STRUCTURE AND MECHANISM OF ACTION OFISOPENTENYLPYROPHOSPHATE- DIMETHYLALLYLPYROPHOSPHATEISOMERASE: COMPLEX OF C67A MUTANT WITH EIPP' PDB 1PPW unspecified 'ISOPENTENYLPYROPHOSPHATE- DIMETHYLALLYLPYROPHOSPHATEISOMERASE IN COMPLEX WITH THE BROMOHYDRINE OF IPP' PDB 1X84 unspecified 'IPP ISOMERASE (WT) REACTED WITH (S)- BROMOHYDRINE OF IPP' PDB 1R67 unspecified 'Y104A MUTANT OF E.COLI IPP ISOMERASE' PDB 1I9A unspecified 'STRUCTURAL STUDIES OF CHOLESTEROL BIOSYNTHESIS : MEVALONATE5-DIPHOSPHATE DECARBOXYLASE AND ISOPENTENYL DIPHOSPHATEISOMERASE' PDB 1NFZ unspecified 'STRUCTURE AND MECHANISM OF ACTION OFISOPENTENYLPYROPHOSPHATE- DIMETHYLALLYLPYROPHOSPHATEISOMERASE: COMPLEX WITH EIPP' PDB 1HX3 unspecified 'CRYSTAL STRUCTURE OF E.COLI ISOPENTENYLDIPHOSPHATE:DIMETHYLALLYL DIPHOSPHATE ISOMERASE' PDB 1X83 unspecified 'Y104F IPP ISOMERASE REACTED WITH (S)- BROMOHYDRINE OF IPP' PDB 1HZT unspecified 'CRYSTAL STRUCTURE OF METAL-FREE ISOPENTENYLDIPHOSPHATE:DIMETHYLALLYL DIPHOSPHATE ISOMERASE' PDB 1PVF unspecified 'E.COLI IPP ISOMERASE IN COMPLEX WITH DIPHOSPHATE' PDB 2VEH unspecified 'MONOCLINIC FORM OF IDI-1' # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 2VEJ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-10-24 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'de Ruyck, J.' 1 'Oudjama, Y.' 2 'Wouters, J.' 3 # _citation.id primary _citation.title 'Monoclinic Form Isopentenyldisphosphate Isomerase' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'De Ruyck, J.' 1 primary 'Oudjama, Y.' 2 primary 'Wouters, J.' 3 # _cell.entry_id 2VEJ _cell.length_a 43.200 _cell.length_b 69.100 _cell.length_c 62.400 _cell.angle_alpha 90.00 _cell.angle_beta 100.30 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VEJ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE' 20644.391 2 5.3.3.2 ? ? ? 2 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 3 water nat water 18.015 74 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ISOPENTENYL DIPHOSPHATE ISOMERASE, IPP ISOMERASE, ISOPENTENYL PYROPHOSPHATE ISOMERASE, IPP DMAPP ISOMERASE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAV IRRCRYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP WMVMQATNREARKRLSAFTQLKL ; _entity_poly.pdbx_seq_one_letter_code_can ;MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAV IRRCRYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP WMVMQATNREARKRLSAFTQLKL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 THR n 1 4 GLU n 1 5 HIS n 1 6 VAL n 1 7 ILE n 1 8 LEU n 1 9 LEU n 1 10 ASN n 1 11 ALA n 1 12 GLN n 1 13 GLY n 1 14 VAL n 1 15 PRO n 1 16 THR n 1 17 GLY n 1 18 THR n 1 19 LEU n 1 20 GLU n 1 21 LYS n 1 22 TYR n 1 23 ALA n 1 24 ALA n 1 25 HIS n 1 26 THR n 1 27 ALA n 1 28 ASP n 1 29 THR n 1 30 ARG n 1 31 LEU n 1 32 HIS n 1 33 LEU n 1 34 ALA n 1 35 PHE n 1 36 SER n 1 37 SER n 1 38 TRP n 1 39 LEU n 1 40 PHE n 1 41 ASN n 1 42 ALA n 1 43 LYS n 1 44 GLY n 1 45 GLN n 1 46 LEU n 1 47 LEU n 1 48 VAL n 1 49 THR n 1 50 ARG n 1 51 ARG n 1 52 ALA n 1 53 LEU n 1 54 SER n 1 55 LYS n 1 56 LYS n 1 57 ALA n 1 58 TRP n 1 59 PRO n 1 60 GLY n 1 61 VAL n 1 62 TRP n 1 63 THR n 1 64 ASN n 1 65 SER n 1 66 VAL n 1 67 CYS n 1 68 GLY n 1 69 HIS n 1 70 PRO n 1 71 GLN n 1 72 LEU n 1 73 GLY n 1 74 GLU n 1 75 SER n 1 76 ASN n 1 77 GLU n 1 78 ASP n 1 79 ALA n 1 80 VAL n 1 81 ILE n 1 82 ARG n 1 83 ARG n 1 84 CYS n 1 85 ARG n 1 86 TYR n 1 87 GLU n 1 88 LEU n 1 89 GLY n 1 90 VAL n 1 91 GLU n 1 92 ILE n 1 93 THR n 1 94 PRO n 1 95 PRO n 1 96 GLU n 1 97 SER n 1 98 ILE n 1 99 TYR n 1 100 PRO n 1 101 ASP n 1 102 PHE n 1 103 ARG n 1 104 TYR n 1 105 ARG n 1 106 ALA n 1 107 THR n 1 108 ASP n 1 109 PRO n 1 110 SER n 1 111 GLY n 1 112 ILE n 1 113 VAL n 1 114 GLU n 1 115 ASN n 1 116 GLU n 1 117 VAL n 1 118 CYS n 1 119 PRO n 1 120 VAL n 1 121 PHE n 1 122 ALA n 1 123 ALA n 1 124 ARG n 1 125 THR n 1 126 THR n 1 127 SER n 1 128 ALA n 1 129 LEU n 1 130 GLN n 1 131 ILE n 1 132 ASN n 1 133 ASP n 1 134 ASP n 1 135 GLU n 1 136 VAL n 1 137 MET n 1 138 ASP n 1 139 TYR n 1 140 GLN n 1 141 TRP n 1 142 CYS n 1 143 ASP n 1 144 LEU n 1 145 ALA n 1 146 ASP n 1 147 VAL n 1 148 LEU n 1 149 HIS n 1 150 GLY n 1 151 ILE n 1 152 ASP n 1 153 ALA n 1 154 THR n 1 155 PRO n 1 156 TRP n 1 157 ALA n 1 158 PHE n 1 159 SER n 1 160 PRO n 1 161 TRP n 1 162 MET n 1 163 VAL n 1 164 MET n 1 165 GLN n 1 166 ALA n 1 167 THR n 1 168 ASN n 1 169 ARG n 1 170 GLU n 1 171 ALA n 1 172 ARG n 1 173 LYS n 1 174 ARG n 1 175 LEU n 1 176 SER n 1 177 ALA n 1 178 PHE n 1 179 THR n 1 180 GLN n 1 181 LEU n 1 182 LYS n 1 183 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP IDI_ECOLI 1 ? ? Q46822 ? 2 PDB 2VEJ 1 ? ? 2VEJ ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VEJ A 1 ? 182 ? Q46822 1 ? 182 ? 1 182 2 2 2VEJ A 183 ? 183 ? 2VEJ 183 ? 183 ? 183 183 3 1 2VEJ B 1 ? 182 ? Q46822 1 ? 182 ? 1 182 4 2 2VEJ B 183 ? 183 ? 2VEJ 183 ? 183 ? 183 183 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VEJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_percent_sol 45.13 _exptl_crystal.description NONE # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9797 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength 0.9797 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VEJ _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 60.00 _reflns.d_resolution_high 2.20 _reflns.number_obs 17775 _reflns.number_all ? _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VEJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17234 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.49 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 98.23 _refine.ls_R_factor_obs 0.20064 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19717 _refine.ls_R_factor_R_free 0.26659 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 937 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.889 _refine.B_iso_mean 21.449 _refine.aniso_B[1][1] 0.15 _refine.aniso_B[2][2] 0.02 _refine.aniso_B[3][3] -0.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.08 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.318 _refine.pdbx_overall_ESU_R_Free 0.246 _refine.overall_SU_ML 0.162 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.240 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2821 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 2897 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 42.49 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.028 0.022 ? 2895 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.195 1.935 ? 3951 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.768 5.000 ? 354 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.510 23.285 ? 137 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.322 15.000 ? 454 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.849 15.000 ? 24 'X-RAY DIFFRACTION' ? r_chiral_restr 0.134 0.200 ? 436 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 2240 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.226 0.200 ? 1288 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.300 0.200 ? 1911 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.206 0.200 ? 114 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.190 0.200 ? 39 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.237 0.200 ? 6 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.218 1.500 ? 1838 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.036 2.000 ? 2878 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.469 3.000 ? 1253 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.883 4.500 ? 1073 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.199 _refine_ls_shell.d_res_low 2.256 _refine_ls_shell.number_reflns_R_work 1235 _refine_ls_shell.R_factor_R_work 0.231 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.350 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VEJ _struct.title 'Monoclinic form of IDI-1' _struct.pdbx_descriptor 'ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE (E.C.5.3.3.2)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VEJ _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'ISOPRENE BIOSYNTHESIS, POLYMORPHISM, METAL-BINDING, IPP ISOMERASE, MANGANESE, CYTOPLASM, ISOMERASE, MAGNESIUM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 21 ? HIS A 25 ? LYS A 21 HIS A 25 1 ? 5 HELX_P HELX_P2 2 SER A 75 ? GLY A 89 ? SER A 75 GLY A 89 1 ? 15 HELX_P HELX_P3 3 ASP A 143 ? THR A 154 ? ASP A 143 THR A 154 1 ? 12 HELX_P HELX_P4 4 PRO A 155 ? ALA A 157 ? PRO A 155 ALA A 157 5 ? 3 HELX_P HELX_P5 5 SER A 159 ? THR A 167 ? SER A 159 THR A 167 1 ? 9 HELX_P HELX_P6 6 ASN A 168 ? THR A 179 ? ASN A 168 THR A 179 1 ? 12 HELX_P HELX_P7 7 LYS B 21 ? HIS B 25 ? LYS B 21 HIS B 25 1 ? 5 HELX_P HELX_P8 8 SER B 75 ? GLY B 89 ? SER B 75 GLY B 89 1 ? 15 HELX_P HELX_P9 9 ASP B 143 ? THR B 154 ? ASP B 143 THR B 154 1 ? 12 HELX_P HELX_P10 10 PRO B 155 ? ALA B 157 ? PRO B 155 ALA B 157 5 ? 3 HELX_P HELX_P11 11 SER B 159 ? ASN B 168 ? SER B 159 ASN B 168 1 ? 10 HELX_P HELX_P12 12 ASN B 168 ? PHE B 178 ? ASN B 168 PHE B 178 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C MN . MN ? ? ? 1_555 A GLU 114 OE2 ? ? A MN 1180 A GLU 114 1_555 ? ? ? ? ? ? ? 1.993 ? metalc2 metalc ? ? C MN . MN ? ? ? 1_555 A HIS 25 NE2 ? ? A MN 1180 A HIS 25 1_555 ? ? ? ? ? ? ? 2.250 ? metalc3 metalc ? ? C MN . MN ? ? ? 1_555 A GLU 114 OE1 ? ? A MN 1180 A GLU 114 1_555 ? ? ? ? ? ? ? 2.507 ? metalc4 metalc ? ? C MN . MN ? ? ? 1_555 A HIS 32 NE2 ? ? A MN 1180 A HIS 32 1_555 ? ? ? ? ? ? ? 2.156 ? metalc5 metalc ? ? C MN . MN ? ? ? 1_555 A HIS 69 NE2 ? ? A MN 1180 A HIS 69 1_555 ? ? ? ? ? ? ? 2.167 ? metalc6 metalc ? ? C MN . MN ? ? ? 1_555 A GLU 116 OE2 ? ? A MN 1180 A GLU 116 1_555 ? ? ? ? ? ? ? 2.005 ? metalc7 metalc ? ? D MN . MN ? ? ? 1_555 B GLU 114 OE2 ? ? B MN 1184 B GLU 114 1_555 ? ? ? ? ? ? ? 2.166 ? metalc8 metalc ? ? D MN . MN ? ? ? 1_555 B GLU 116 OE2 ? ? B MN 1184 B GLU 116 1_555 ? ? ? ? ? ? ? 1.911 ? metalc9 metalc ? ? D MN . MN ? ? ? 1_555 B HIS 25 NE2 ? ? B MN 1184 B HIS 25 1_555 ? ? ? ? ? ? ? 2.152 ? metalc10 metalc ? ? D MN . MN ? ? ? 1_555 B HIS 69 NE2 ? ? B MN 1184 B HIS 69 1_555 ? ? ? ? ? ? ? 2.148 ? metalc11 metalc ? ? D MN . MN ? ? ? 1_555 B GLU 114 OE1 ? ? B MN 1184 B GLU 114 1_555 ? ? ? ? ? ? ? 2.431 ? metalc12 metalc ? ? D MN . MN ? ? ? 1_555 B HIS 32 NE2 ? ? B MN 1184 B HIS 32 1_555 ? ? ? ? ? ? ? 2.119 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 3 ? AC ? 4 ? AD ? 3 ? BA ? 2 ? BB ? 3 ? BC ? 4 ? BD ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? parallel AC 3 4 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel BA 1 2 ? anti-parallel BB 1 2 ? parallel BB 2 3 ? anti-parallel BC 1 2 ? anti-parallel BC 2 3 ? parallel BC 3 4 ? anti-parallel BD 1 2 ? anti-parallel BD 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 HIS A 5 ? LEU A 9 ? HIS A 5 LEU A 9 AA 2 PRO A 15 ? GLU A 20 ? PRO A 15 GLU A 20 AB 1 HIS A 32 ? LEU A 33 ? HIS A 32 LEU A 33 AB 2 VAL A 113 ? VAL A 117 ? VAL A 113 VAL A 117 AB 3 ARG A 103 ? THR A 107 ? ARG A 103 THR A 107 AC 1 VAL A 66 ? GLY A 68 ? VAL A 66 GLY A 68 AC 2 PHE A 35 ? PHE A 40 ? PHE A 35 PHE A 40 AC 3 VAL A 120 ? ARG A 124 ? VAL A 120 ARG A 124 AC 4 GLU A 96 ? TYR A 99 ? GLU A 96 TYR A 99 AD 1 TRP A 62 ? THR A 63 ? TRP A 62 THR A 63 AD 2 LEU A 46 ? ARG A 51 ? LEU A 46 ARG A 51 AD 3 VAL A 136 ? CYS A 142 ? VAL A 136 CYS A 142 BA 1 HIS B 5 ? LEU B 9 ? HIS B 5 LEU B 9 BA 2 PRO B 15 ? GLU B 20 ? PRO B 15 GLU B 20 BB 1 HIS B 32 ? LEU B 33 ? HIS B 32 LEU B 33 BB 2 VAL B 113 ? VAL B 117 ? VAL B 113 VAL B 117 BB 3 ARG B 103 ? THR B 107 ? ARG B 103 THR B 107 BC 1 VAL B 66 ? GLY B 68 ? VAL B 66 GLY B 68 BC 2 PHE B 35 ? PHE B 40 ? PHE B 35 PHE B 40 BC 3 VAL B 120 ? ARG B 124 ? VAL B 120 ARG B 124 BC 4 GLU B 96 ? TYR B 99 ? GLU B 96 TYR B 99 BD 1 TRP B 62 ? THR B 63 ? TRP B 62 THR B 63 BD 2 LEU B 46 ? ARG B 51 ? LEU B 46 ARG B 51 BD 3 VAL B 136 ? CYS B 142 ? VAL B 136 CYS B 142 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 O LEU A 8 ? O LEU A 8 N THR A 16 ? N THR A 16 AB 1 2 N HIS A 32 ? N HIS A 32 O ASN A 115 ? O ASN A 115 AB 2 3 N GLU A 116 ? N GLU A 116 O TYR A 104 ? O TYR A 104 AC 1 2 N GLY A 68 ? N GLY A 68 O PHE A 35 ? O PHE A 35 AC 2 3 N TRP A 38 ? N TRP A 38 O PHE A 121 ? O PHE A 121 AC 3 4 N ALA A 122 ? N ALA A 122 O GLU A 96 ? O GLU A 96 AD 1 2 N THR A 63 ? N THR A 63 O THR A 49 ? O THR A 49 AD 2 3 O ARG A 50 ? O ARG A 50 N MET A 137 ? N MET A 137 BA 1 2 O LEU B 8 ? O LEU B 8 N THR B 16 ? N THR B 16 BB 1 2 N HIS B 32 ? N HIS B 32 O ASN B 115 ? O ASN B 115 BB 2 3 N GLU B 116 ? N GLU B 116 O TYR B 104 ? O TYR B 104 BC 1 2 N GLY B 68 ? N GLY B 68 O PHE B 35 ? O PHE B 35 BC 2 3 N TRP B 38 ? N TRP B 38 O PHE B 121 ? O PHE B 121 BC 3 4 N ALA B 122 ? N ALA B 122 O GLU B 96 ? O GLU B 96 BD 1 2 N THR B 63 ? N THR B 63 O THR B 49 ? O THR B 49 BD 2 3 O ARG B 50 ? O ARG B 50 N MET B 137 ? N MET B 137 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 ? ? ? ? ? 5 'MN BINDING SITE FOR CHAIN A' AC2 ? ? ? ? ? 5 'MN BINDING SITE FOR CHAIN B' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 25 ? HIS A 25 . ? 1_555 ? 2 AC1 5 HIS A 32 ? HIS A 32 . ? 1_555 ? 3 AC1 5 HIS A 69 ? HIS A 69 . ? 1_555 ? 4 AC1 5 GLU A 114 ? GLU A 114 . ? 1_555 ? 5 AC1 5 GLU A 116 ? GLU A 116 . ? 1_555 ? 6 AC2 5 HIS B 25 ? HIS B 25 . ? 1_555 ? 7 AC2 5 HIS B 32 ? HIS B 32 . ? 1_555 ? 8 AC2 5 HIS B 69 ? HIS B 69 . ? 1_555 ? 9 AC2 5 GLU B 114 ? GLU B 114 . ? 1_555 ? 10 AC2 5 GLU B 116 ? GLU B 116 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VEJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VEJ _atom_sites.fract_transf_matrix[1][1] 0.023148 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004207 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014472 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016288 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLN 2 2 ? ? ? A . n A 1 3 THR 3 3 ? ? ? A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 TRP 38 38 38 TRP TRP A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 THR 49 49 49 THR THR A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 TRP 58 58 58 TRP TRP A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 ARG 85 85 85 ARG ARG A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 CYS 118 118 118 CYS CYS A . n A 1 119 PRO 119 119 119 PRO PRO A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 SER 127 127 127 SER SER A . n A 1 128 ALA 128 128 128 ALA ALA A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 MET 137 137 137 MET MET A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 GLN 140 140 140 GLN GLN A . n A 1 141 TRP 141 141 141 TRP TRP A . n A 1 142 CYS 142 142 142 CYS CYS A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 TRP 156 156 156 TRP TRP A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 SER 159 159 159 SER SER A . n A 1 160 PRO 160 160 160 PRO PRO A . n A 1 161 TRP 161 161 161 TRP TRP A . n A 1 162 MET 162 162 162 MET MET A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 MET 164 164 164 MET MET A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 ASN 168 168 168 ASN ASN A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 ALA 171 171 171 ALA ALA A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 GLN 180 180 ? ? ? A . n A 1 181 LEU 181 181 ? ? ? A . n A 1 182 LYS 182 182 ? ? ? A . n A 1 183 LEU 183 183 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 GLN 2 2 ? ? ? B . n B 1 3 THR 3 3 ? ? ? B . n B 1 4 GLU 4 4 4 GLU GLU B . n B 1 5 HIS 5 5 5 HIS HIS B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 ASN 10 10 10 ASN ASN B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 GLN 12 12 12 GLN GLN B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 PRO 15 15 15 PRO PRO B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 GLU 20 20 20 GLU GLU B . n B 1 21 LYS 21 21 21 LYS LYS B . n B 1 22 TYR 22 22 22 TYR TYR B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 HIS 25 25 25 HIS HIS B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 ASP 28 28 28 ASP ASP B . n B 1 29 THR 29 29 29 THR THR B . n B 1 30 ARG 30 30 30 ARG ARG B . n B 1 31 LEU 31 31 31 LEU LEU B . n B 1 32 HIS 32 32 32 HIS HIS B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 PHE 35 35 35 PHE PHE B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 TRP 38 38 38 TRP TRP B . n B 1 39 LEU 39 39 39 LEU LEU B . n B 1 40 PHE 40 40 40 PHE PHE B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 GLY 44 44 44 GLY GLY B . n B 1 45 GLN 45 45 45 GLN GLN B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 LEU 47 47 47 LEU LEU B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 THR 49 49 49 THR THR B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 ARG 51 51 51 ARG ARG B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 SER 54 54 54 SER SER B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 LYS 56 56 56 LYS LYS B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 TRP 58 58 58 TRP TRP B . n B 1 59 PRO 59 59 59 PRO PRO B . n B 1 60 GLY 60 60 60 GLY GLY B . n B 1 61 VAL 61 61 61 VAL VAL B . n B 1 62 TRP 62 62 62 TRP TRP B . n B 1 63 THR 63 63 63 THR THR B . n B 1 64 ASN 64 64 64 ASN ASN B . n B 1 65 SER 65 65 65 SER SER B . n B 1 66 VAL 66 66 66 VAL VAL B . n B 1 67 CYS 67 67 67 CYS CYS B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 PRO 70 70 70 PRO PRO B . n B 1 71 GLN 71 71 71 GLN GLN B . n B 1 72 LEU 72 72 72 LEU LEU B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 SER 75 75 75 SER SER B . n B 1 76 ASN 76 76 76 ASN ASN B . n B 1 77 GLU 77 77 77 GLU GLU B . n B 1 78 ASP 78 78 78 ASP ASP B . n B 1 79 ALA 79 79 79 ALA ALA B . n B 1 80 VAL 80 80 80 VAL VAL B . n B 1 81 ILE 81 81 81 ILE ILE B . n B 1 82 ARG 82 82 82 ARG ARG B . n B 1 83 ARG 83 83 83 ARG ARG B . n B 1 84 CYS 84 84 84 CYS CYS B . n B 1 85 ARG 85 85 85 ARG ARG B . n B 1 86 TYR 86 86 86 TYR TYR B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 LEU 88 88 88 LEU LEU B . n B 1 89 GLY 89 89 89 GLY GLY B . n B 1 90 VAL 90 90 90 VAL VAL B . n B 1 91 GLU 91 91 91 GLU GLU B . n B 1 92 ILE 92 92 92 ILE ILE B . n B 1 93 THR 93 93 93 THR THR B . n B 1 94 PRO 94 94 94 PRO PRO B . n B 1 95 PRO 95 95 95 PRO PRO B . n B 1 96 GLU 96 96 96 GLU GLU B . n B 1 97 SER 97 97 97 SER SER B . n B 1 98 ILE 98 98 98 ILE ILE B . n B 1 99 TYR 99 99 99 TYR TYR B . n B 1 100 PRO 100 100 100 PRO PRO B . n B 1 101 ASP 101 101 101 ASP ASP B . n B 1 102 PHE 102 102 102 PHE PHE B . n B 1 103 ARG 103 103 103 ARG ARG B . n B 1 104 TYR 104 104 104 TYR TYR B . n B 1 105 ARG 105 105 105 ARG ARG B . n B 1 106 ALA 106 106 106 ALA ALA B . n B 1 107 THR 107 107 107 THR THR B . n B 1 108 ASP 108 108 108 ASP ASP B . n B 1 109 PRO 109 109 109 PRO PRO B . n B 1 110 SER 110 110 110 SER SER B . n B 1 111 GLY 111 111 111 GLY GLY B . n B 1 112 ILE 112 112 112 ILE ILE B . n B 1 113 VAL 113 113 113 VAL VAL B . n B 1 114 GLU 114 114 114 GLU GLU B . n B 1 115 ASN 115 115 115 ASN ASN B . n B 1 116 GLU 116 116 116 GLU GLU B . n B 1 117 VAL 117 117 117 VAL VAL B . n B 1 118 CYS 118 118 118 CYS CYS B . n B 1 119 PRO 119 119 119 PRO PRO B . n B 1 120 VAL 120 120 120 VAL VAL B . n B 1 121 PHE 121 121 121 PHE PHE B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 ALA 123 123 123 ALA ALA B . n B 1 124 ARG 124 124 124 ARG ARG B . n B 1 125 THR 125 125 125 THR THR B . n B 1 126 THR 126 126 126 THR THR B . n B 1 127 SER 127 127 127 SER SER B . n B 1 128 ALA 128 128 128 ALA ALA B . n B 1 129 LEU 129 129 129 LEU LEU B . n B 1 130 GLN 130 130 130 GLN GLN B . n B 1 131 ILE 131 131 131 ILE ILE B . n B 1 132 ASN 132 132 132 ASN ASN B . n B 1 133 ASP 133 133 133 ASP ASP B . n B 1 134 ASP 134 134 134 ASP ASP B . n B 1 135 GLU 135 135 135 GLU GLU B . n B 1 136 VAL 136 136 136 VAL VAL B . n B 1 137 MET 137 137 137 MET MET B . n B 1 138 ASP 138 138 138 ASP ASP B . n B 1 139 TYR 139 139 139 TYR TYR B . n B 1 140 GLN 140 140 140 GLN GLN B . n B 1 141 TRP 141 141 141 TRP TRP B . n B 1 142 CYS 142 142 142 CYS CYS B . n B 1 143 ASP 143 143 143 ASP ASP B . n B 1 144 LEU 144 144 144 LEU LEU B . n B 1 145 ALA 145 145 145 ALA ALA B . n B 1 146 ASP 146 146 146 ASP ASP B . n B 1 147 VAL 147 147 147 VAL VAL B . n B 1 148 LEU 148 148 148 LEU LEU B . n B 1 149 HIS 149 149 149 HIS HIS B . n B 1 150 GLY 150 150 150 GLY GLY B . n B 1 151 ILE 151 151 151 ILE ILE B . n B 1 152 ASP 152 152 152 ASP ASP B . n B 1 153 ALA 153 153 153 ALA ALA B . n B 1 154 THR 154 154 154 THR THR B . n B 1 155 PRO 155 155 155 PRO PRO B . n B 1 156 TRP 156 156 156 TRP TRP B . n B 1 157 ALA 157 157 157 ALA ALA B . n B 1 158 PHE 158 158 158 PHE PHE B . n B 1 159 SER 159 159 159 SER SER B . n B 1 160 PRO 160 160 160 PRO PRO B . n B 1 161 TRP 161 161 161 TRP TRP B . n B 1 162 MET 162 162 162 MET MET B . n B 1 163 VAL 163 163 163 VAL VAL B . n B 1 164 MET 164 164 164 MET MET B . n B 1 165 GLN 165 165 165 GLN GLN B . n B 1 166 ALA 166 166 166 ALA ALA B . n B 1 167 THR 167 167 167 THR THR B . n B 1 168 ASN 168 168 168 ASN ASN B . n B 1 169 ARG 169 169 169 ARG ARG B . n B 1 170 GLU 170 170 170 GLU GLU B . n B 1 171 ALA 171 171 171 ALA ALA B . n B 1 172 ARG 172 172 172 ARG ARG B . n B 1 173 LYS 173 173 173 LYS LYS B . n B 1 174 ARG 174 174 174 ARG ARG B . n B 1 175 LEU 175 175 175 LEU LEU B . n B 1 176 SER 176 176 176 SER SER B . n B 1 177 ALA 177 177 177 ALA ALA B . n B 1 178 PHE 178 178 178 PHE PHE B . n B 1 179 THR 179 179 179 THR THR B . n B 1 180 GLN 180 180 180 GLN GLN B . n B 1 181 LEU 181 181 181 LEU LEU B . n B 1 182 LYS 182 182 182 LYS LYS B . n B 1 183 LEU 183 183 183 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN 1 1180 1180 MN MN A . D 2 MN 1 1184 1184 MN MN B . E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . F 3 HOH 1 2001 2001 HOH HOH B . F 3 HOH 2 2002 2002 HOH HOH B . F 3 HOH 3 2003 2003 HOH HOH B . F 3 HOH 4 2004 2004 HOH HOH B . F 3 HOH 5 2005 2005 HOH HOH B . F 3 HOH 6 2006 2006 HOH HOH B . F 3 HOH 7 2007 2007 HOH HOH B . F 3 HOH 8 2008 2008 HOH HOH B . F 3 HOH 9 2009 2009 HOH HOH B . F 3 HOH 10 2010 2010 HOH HOH B . F 3 HOH 11 2011 2011 HOH HOH B . F 3 HOH 12 2012 2012 HOH HOH B . F 3 HOH 13 2013 2013 HOH HOH B . F 3 HOH 14 2014 2014 HOH HOH B . F 3 HOH 15 2015 2015 HOH HOH B . F 3 HOH 16 2016 2016 HOH HOH B . F 3 HOH 17 2017 2017 HOH HOH B . F 3 HOH 18 2018 2018 HOH HOH B . F 3 HOH 19 2019 2019 HOH HOH B . F 3 HOH 20 2020 2020 HOH HOH B . F 3 HOH 21 2021 2021 HOH HOH B . F 3 HOH 22 2022 2022 HOH HOH B . F 3 HOH 23 2023 2023 HOH HOH B . F 3 HOH 24 2024 2024 HOH HOH B . F 3 HOH 25 2025 2025 HOH HOH B . F 3 HOH 26 2026 2026 HOH HOH B . F 3 HOH 27 2027 2027 HOH HOH B . F 3 HOH 28 2028 2028 HOH HOH B . F 3 HOH 29 2029 2029 HOH HOH B . F 3 HOH 30 2030 2030 HOH HOH B . F 3 HOH 31 2031 2031 HOH HOH B . F 3 HOH 32 2032 2032 HOH HOH B . F 3 HOH 33 2033 2033 HOH HOH B . F 3 HOH 34 2034 2034 HOH HOH B . F 3 HOH 35 2035 2035 HOH HOH B . F 3 HOH 36 2036 2036 HOH HOH B . F 3 HOH 37 2037 2037 HOH HOH B . F 3 HOH 38 2038 2038 HOH HOH B . F 3 HOH 39 2039 2039 HOH HOH B . F 3 HOH 40 2040 2040 HOH HOH B . F 3 HOH 41 2041 2041 HOH HOH B . F 3 HOH 42 2042 2042 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 97.2 ? 2 OE2 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 OE1 ? A GLU 114 ? A GLU 114 ? 1_555 57.0 ? 3 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 OE1 ? A GLU 114 ? A GLU 114 ? 1_555 91.6 ? 4 OE2 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 32 ? A HIS 32 ? 1_555 93.9 ? 5 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 32 ? A HIS 32 ? 1_555 87.9 ? 6 OE1 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 32 ? A HIS 32 ? 1_555 150.7 ? 7 OE2 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 161.1 ? 8 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 94.9 ? 9 OE1 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 108.3 ? 10 NE2 ? A HIS 32 ? A HIS 32 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 101.0 ? 11 OE2 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 OE2 ? A GLU 116 ? A GLU 116 ? 1_555 85.0 ? 12 NE2 ? A HIS 25 ? A HIS 25 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 OE2 ? A GLU 116 ? A GLU 116 ? 1_555 176.7 ? 13 OE1 ? A GLU 114 ? A GLU 114 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 OE2 ? A GLU 116 ? A GLU 116 ? 1_555 87.6 ? 14 NE2 ? A HIS 32 ? A HIS 32 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 OE2 ? A GLU 116 ? A GLU 116 ? 1_555 94.3 ? 15 NE2 ? A HIS 69 ? A HIS 69 ? 1_555 MN ? C MN . ? A MN 1180 ? 1_555 OE2 ? A GLU 116 ? A GLU 116 ? 1_555 82.4 ? 16 OE2 ? B GLU 114 ? B GLU 114 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 OE2 ? B GLU 116 ? B GLU 116 ? 1_555 84.3 ? 17 OE2 ? B GLU 114 ? B GLU 114 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 25 ? B HIS 25 ? 1_555 86.4 ? 18 OE2 ? B GLU 116 ? B GLU 116 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 25 ? B HIS 25 ? 1_555 170.0 ? 19 OE2 ? B GLU 114 ? B GLU 114 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 69 ? B HIS 69 ? 1_555 157.9 ? 20 OE2 ? B GLU 116 ? B GLU 116 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 69 ? B HIS 69 ? 1_555 86.4 ? 21 NE2 ? B HIS 25 ? B HIS 25 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 69 ? B HIS 69 ? 1_555 101.0 ? 22 OE2 ? B GLU 114 ? B GLU 114 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 OE1 ? B GLU 114 ? B GLU 114 ? 1_555 57.0 ? 23 OE2 ? B GLU 116 ? B GLU 116 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 OE1 ? B GLU 114 ? B GLU 114 ? 1_555 86.2 ? 24 NE2 ? B HIS 25 ? B HIS 25 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 OE1 ? B GLU 114 ? B GLU 114 ? 1_555 85.6 ? 25 NE2 ? B HIS 69 ? B HIS 69 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 OE1 ? B GLU 114 ? B GLU 114 ? 1_555 102.4 ? 26 OE2 ? B GLU 114 ? B GLU 114 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 32 ? B HIS 32 ? 1_555 96.2 ? 27 OE2 ? B GLU 116 ? B GLU 116 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 32 ? B HIS 32 ? 1_555 99.9 ? 28 NE2 ? B HIS 25 ? B HIS 25 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 32 ? B HIS 32 ? 1_555 84.8 ? 29 NE2 ? B HIS 69 ? B HIS 69 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 32 ? B HIS 32 ? 1_555 105.1 ? 30 OE1 ? B GLU 114 ? B GLU 114 ? 1_555 MN ? D MN . ? B MN 1184 ? 1_555 NE2 ? B HIS 32 ? B HIS 32 ? 1_555 152.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-10-30 2 'Structure model' 1 1 2008-03-18 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _software.name REFMAC _software.classification refinement _software.version 5.2.0019 _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2008 ? ? O A HOH 2010 ? ? 1.74 2 1 O B THR 107 ? ? O B HOH 2029 ? ? 2.17 3 1 O B HOH 2014 ? ? O B HOH 2038 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A LYS 21 ? ? CE A LYS 21 ? ? 1.659 1.508 0.151 0.025 N 2 1 CE A LYS 21 ? ? NZ A LYS 21 ? ? 1.664 1.486 0.178 0.025 N 3 1 CB A CYS 142 ? ? SG A CYS 142 ? ? 1.696 1.812 -0.116 0.016 N 4 1 CB A GLU 170 ? ? CG A GLU 170 ? ? 1.649 1.517 0.132 0.019 N 5 1 CD B LYS 21 ? ? CE B LYS 21 ? ? 1.715 1.508 0.207 0.025 N 6 1 CB B CYS 142 ? ? SG B CYS 142 ? ? 1.689 1.812 -0.123 0.016 N 7 1 CZ B ARG 174 ? ? NH2 B ARG 174 ? ? 1.417 1.326 0.091 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 19 ? ? CB A LEU 19 ? ? CG A LEU 19 ? ? 129.84 115.30 14.54 2.30 N 2 1 CD A LYS 21 ? ? CE A LYS 21 ? ? NZ A LYS 21 ? ? 128.56 111.70 16.86 2.30 N 3 1 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH1 A ARG 30 ? ? 116.78 120.30 -3.52 0.50 N 4 1 NE A ARG 30 ? ? CZ A ARG 30 ? ? NH2 A ARG 30 ? ? 123.33 120.30 3.03 0.50 N 5 1 CD B LYS 21 ? ? CE B LYS 21 ? ? NZ B LYS 21 ? ? 130.94 111.70 19.24 2.30 N 6 1 NE B ARG 30 ? ? CZ B ARG 30 ? ? NH1 B ARG 30 ? ? 116.50 120.30 -3.80 0.50 N 7 1 NE B ARG 30 ? ? CZ B ARG 30 ? ? NH2 B ARG 30 ? ? 123.56 120.30 3.26 0.50 N 8 1 NE B ARG 174 ? ? CZ B ARG 174 ? ? NH1 B ARG 174 ? ? 112.57 120.30 -7.73 0.50 N 9 1 NE B ARG 174 ? ? CZ B ARG 174 ? ? NH2 B ARG 174 ? ? 123.30 120.30 3.00 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 28 ? ? -148.28 35.15 2 1 THR A 29 ? ? -39.53 125.60 3 1 TRP A 58 ? ? 37.24 48.89 4 1 TYR A 99 ? ? -159.75 80.30 5 1 TRP B 58 ? ? 38.14 50.61 6 1 TYR B 99 ? ? -153.27 78.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLN 2 ? A GLN 2 3 1 Y 1 A THR 3 ? A THR 3 4 1 Y 1 A GLN 180 ? A GLN 180 5 1 Y 1 A LEU 181 ? A LEU 181 6 1 Y 1 A LYS 182 ? A LYS 182 7 1 Y 1 A LEU 183 ? A LEU 183 8 1 Y 1 B MET 1 ? B MET 1 9 1 Y 1 B GLN 2 ? B GLN 2 10 1 Y 1 B THR 3 ? B THR 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MANGANESE (II) ION' MN 3 water HOH #