data_2VF0 # _entry.id 2VF0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VF0 pdb_00002vf0 10.2210/pdb2vf0/pdb PDBE EBI-34239 ? ? WWPDB D_1290034239 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1JG0 unspecified ;CRYSTAL STRUCTURE OF ESCHERICHIA COLI THYMIDYLATE SYNTHASECOMPLEXED WITH 2'- DEOXYURIDINE-5'-MONOPHOSPHATE AND N,O- DIDANSYL-L-TYROSINE ; PDB 1BID unspecified 'E. COLI THYMIDYLATE SYNTHASE COMPLEXED WITH DUMP' PDB 1JTU unspecified 'E. COLI THYMIDYLATE SYNTHASE IN A COMPLEX WITH DUMP ANDLY338913, A POLYGLUTAMYLATED PYRROLO(2,3-D)PYRIMIDINE-BASED ANTIFOLATE' PDB 1DDU unspecified ;E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH CB3717 AND 2',5'-DIDEOXYURIDINE (DDURD) ; PDB 1BJG unspecified 'D221(169)N MUTANT DOES NOT PROMOTE OPENING OF THE COFACTOR IMIDAZOLIDINE RING' PDB 1AXW unspecified ;E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH METHOTREXATE (MTX) AND 2'-DEOXYURIDINE 5'- MONOPHOSPHATE (DUMP) ; PDB 2FTQ unspecified 'E. COLI THYMIDYLATE SYNTHASE AT 1.8 A RESOLUTION' PDB 1SYN unspecified ;E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH BW1843U89 AND 2'-DEOXYURIDINE 5'- MONOPHOSPHATE (DUMP) ; PDB 1TSD unspecified ;THYMIDYLATE SYNTHASE COMPLEX WITH 2'- DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP) AND FOLATE ANALOG 1843U89 ; PDB 1FFL unspecified 'CRYSTAL STRUCTURE OF THE APO-THYMIDYLATE SYNTHASE R166QMUTANT' PDB 1BQ1 unspecified ;E. COLI THYMIDYLATE SYNTHASE MUTANT N177A IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5 '-MONOPHOSPHATE (DUMP) ; PDB 2KCE unspecified 'BINDING OF THE ANTICANCER DRUG ZD1694 TO E . COLI THYMIDYLATE SYNTHASE: ASSESSING SPECIFICITY AND AFFINITY' PDB 1EVF unspecified 'CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI' PDB 2FTN unspecified 'E. COLI THYMIDYLATE SYNTHASE Y94F MUTANT' PDB 1DNA unspecified 'D221(169)N MUTANT DOES NOT PROMOTE OPENING OF THE COFACTOR IMIDAZOLIDINE RING' PDB 1KCE unspecified ;E. COLI THYMIDYLATE SYNTHASE MUTANT E58Q IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5 '-MONOPHOSPHATE (DUMP) ; PDB 1JTQ unspecified 'E. COLI TS COMPLEX WITH DUMP AND THE PYRROLO(2,3-D)PYRIMIDINE-BASED ANTIFOLATE LY341770' PDB 1F4G unspecified 'CRYSTAL STRUCTURE OF E. COLI THYMIDYLATE SYNTHASE COMPLEXEDWITH SP-876' PDB 1F4F unspecified 'CRYSTAL STRUCTURE OF E. COLI THYMIDYLATE SYNTHASE COMPLEXEDWITH SP-722' PDB 1TJS unspecified 'E. COLI THYMIDYLATE SYNTHASE' PDB 1FWM unspecified 'CRYSTAL STRUCTURE OF THE THYMIDYLATE SYNTHASE R166Q MUTANT' PDB 1AN5 unspecified 'E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH CB3717' PDB 1F4C unspecified 'CRYSTAL STRUCTURE OF E. COLI THYMIDYLATE SYNTHASECOVALENTLY MODIFIED AT C146 WITH N-[ TOSYL-D-PROLINYL]AMINO-ETHANETHIOL' PDB 1KZJ unspecified 'CRYSTAL STRUCTURE OF ECTS W80G/DUMP/CB3717 COMPLEX' PDB 1TRG unspecified ;E. COLI THYMIDYLATE SYNTHASE IN SYMMETRIC COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5'- MONOPHOSPHATE (DUMP) ; PDB 2BBQ unspecified 'THYMIDYLATE SYNTHASE COMPLEX WITH D-UMP AND POLYGLUTAMYL CB3717' PDB 2G8O unspecified 'HIGH RESOLUTION STRUCTURE OF ESCHERICHIA COLI THYMIDYLATESYNTHASE TERNARY COMPLEX WITH DUMP AND A COFACTOR ANALOG,CB3717' PDB 1TYS unspecified 'THYMIDYLATE SYNTHASE MUTANT WITH CYS 146 REPLACED BY SER (C146S)' PDB 1NCE unspecified 'CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF E. COLITHYMIDYLATE SYNTHASE D169C WITH DUMP AND THE ANTIFOLATECB3717' PDB 1JUT unspecified 'E. COLI THYMIDYLATE SYNTHASE BOUND TO DUMP AND LY338529, APYRROLO(2,3-D)PYRIMIDINE- BASED ANTIFOLATE' PDB 1TLC unspecified 'THYMIDYLATE SYNTHASE COMPLEXED WITH DGMP AND FOLATE ANALOG 1843U89' PDB 2G8X unspecified 'ESCHERICHIA COLI Y209W APOPROTEIN' PDB 1EVG unspecified 'CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI WITH UNMODIFIED CATALYTIC CYSTEINE' PDB 1QQQ unspecified 'CRYSTAL STRUCTURE ANALYSIS OF SER254 MUTANT OF ESCHERICHIA COLI THYMIDYLATE SYNTHASE' PDB 1EV8 unspecified 'CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI' PDB 1TLS unspecified 'THYMIDYLATE SYNTHASE TERNARY COMPLEX WITH FDUMP AND METHYLENETETRAHYDROFOLATE' PDB 1F4B unspecified 'CRYSTAL STRUCTURE OF ESCHERICHIA COLI THYMIDYLATE SYNTHASE' PDB 1ZPR unspecified ;E. COLI THYMIDYLATE SYNTHASE MUTANT E58Q IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5 '-MONOPHOSPHATE (DUMP) ; PDB 2FTO unspecified ;Y94F MUTANT OF THYMIDYLATE SYNTHASE BOUND TO THYMIDINE-5'-PHOSPHATE AND 10-PROPARGYL-5 ,8-DIDEAZAFOLID ACID ; PDB 1KZI unspecified 'CRYSTAL STRUCTURE OF ECTS/DUMP/THF COMPLEX' PDB 1F4E unspecified 'CRYSTAL STRUCTURE OF E. COLI THYMIDYLATE SYNTHASE COMPLEXEDWITH TOSYL-D-PROLINE' PDB 1BDU unspecified 'E. COLI THYMIDYLATE SYNTHASE COMPLEXED WITH DURD' PDB 3TMS unspecified 'THYMIDYLATE SYNTHASE' PDB 2A9W unspecified 'E. COLI TS COMPLEXED WITH DUMP AND INHIBITOR GA9' PDB 1TDU unspecified ;E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE (DURD) ; PDB 2G8M unspecified 'ESCHERICHIA COLI THYMIDYLATE SYNTHASE Y209W IN COMPLEX WITHSUBSTRATE, DUMP, AND A COFACTOR ANALOG, CB3717' PDB 1AOB unspecified 'E. COLI THYMIDYLATE SYNTHASE COMPLEXED WITH DDURD' PDB 1BQ2 unspecified 'E. COLI THYMIDYLATE SYNTHASE MUTANT N177A' PDB 1AIQ unspecified 'CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE R126E MUTANT' PDB 1F4D unspecified ;CRYSTAL STRUCTURE OF E. COLI THYMIDYLATE SYNTHASE C146S,L143C COVALENTLY MODIFIED AT C143 WITH N-[TOSYL-D-PROLINYL]AMINO- ETHANETHIOL ; PDB 1EV5 unspecified 'CRYSTAL STRUCTURE ANALYSIS OF ALA167 MUTANT OF ESCHERICHIA COLI' PDB 1AJM unspecified 'CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE R126E MUTANT' PDB 2TSC unspecified 'THYMIDYLATE SYNTHASE COMPLEX WITH DUMP AND AN ANTI-FOLATE (CB3717)' PDB 1TSN unspecified 'THYMIDYLATE SYNTHASE TERNARY COMPLEX WITH FDUMP AND METHYLENETETRAHYDROFOLATE' PDB 3B5B unspecified 'CRYSTAL STRUCTURE OF THE THYMIDYLATE SYNTHASE K48Q MUTANT K48Q COMPLEXED WITH 5NO2DUMP' PDB 2VET unspecified 'CRYSTAL STRUCTURE OF THE THYMIDYLATE SYNTHASE K48Q COMPLEXED WITH DUMP' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VF0 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-10-27 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sotelo-Mundo, R.R.' 1 'Arreola, R.' 2 'Maley, F.' 3 'Montfort, W.R.' 4 # _citation.id primary _citation.title ;Role of an Invariant Lysine Residue in Folate Binding on Escherichia Coli Thymidylate Synthase: Calorimetric and Crystallographic Analysis of the K48Q Mutant. ; _citation.journal_abbrev 'Int.J.Biochem.Cell Biol.' _citation.journal_volume 40 _citation.page_first 2206 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1357-2725 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18403248 _citation.pdbx_database_id_DOI 10.1016/J.BIOCEL.2008.02.025 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arvizu-Flores, A.A.' 1 ? primary 'Sugich-Miranda, R.' 2 ? primary 'Arreola, R.' 3 ? primary 'Garcia-Orozco, K.D.' 4 ? primary 'Velazquez-Contreras, E.F.' 5 ? primary 'Montfort, W.R.' 6 ? primary 'Maley, F.' 7 ? primary 'Sotelo-Mundo, R.R.' 8 ? # _cell.entry_id 2VF0 _cell.length_a 127.160 _cell.length_b 127.160 _cell.length_c 67.950 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VF0 _symmetry.space_group_name_H-M 'P 63' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'THYMIDYLATE SYNTHASE' 30558.615 2 2.1.1.45 YES ? 'MUTANT K48Q COMPLEXED WITH 5-NO2DUMP AND BW1843U89' 2 non-polymer syn ;2'-DEOXY-5-NITROURIDINE 5'-MONOPHOSPHATE ; 355.195 2 ? ? ? ? 3 non-polymer syn 'S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN-9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID' 500.503 2 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 5 water nat water 18.015 29 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TS, TSASE,' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(CXM)KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELLWFLQGDTNIAYLHENN VTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVAD GKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKP ESIFDYRFEDFEIEGYDPHPGIKAPVAI ; _entity_poly.pdbx_seq_one_letter_code_can ;MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTQRCHLRSIIHELLWFLQGDTNIAYLHENNVTIW DEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIF DYRFEDFEIEGYDPHPGIKAPVAI ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CXM n 1 2 LYS n 1 3 GLN n 1 4 TYR n 1 5 LEU n 1 6 GLU n 1 7 LEU n 1 8 MET n 1 9 GLN n 1 10 LYS n 1 11 VAL n 1 12 LEU n 1 13 ASP n 1 14 GLU n 1 15 GLY n 1 16 THR n 1 17 GLN n 1 18 LYS n 1 19 ASN n 1 20 ASP n 1 21 ARG n 1 22 THR n 1 23 GLY n 1 24 THR n 1 25 GLY n 1 26 THR n 1 27 LEU n 1 28 SER n 1 29 ILE n 1 30 PHE n 1 31 GLY n 1 32 HIS n 1 33 GLN n 1 34 MET n 1 35 ARG n 1 36 PHE n 1 37 ASN n 1 38 LEU n 1 39 GLN n 1 40 ASP n 1 41 GLY n 1 42 PHE n 1 43 PRO n 1 44 LEU n 1 45 VAL n 1 46 THR n 1 47 THR n 1 48 GLN n 1 49 ARG n 1 50 CYS n 1 51 HIS n 1 52 LEU n 1 53 ARG n 1 54 SER n 1 55 ILE n 1 56 ILE n 1 57 HIS n 1 58 GLU n 1 59 LEU n 1 60 LEU n 1 61 TRP n 1 62 PHE n 1 63 LEU n 1 64 GLN n 1 65 GLY n 1 66 ASP n 1 67 THR n 1 68 ASN n 1 69 ILE n 1 70 ALA n 1 71 TYR n 1 72 LEU n 1 73 HIS n 1 74 GLU n 1 75 ASN n 1 76 ASN n 1 77 VAL n 1 78 THR n 1 79 ILE n 1 80 TRP n 1 81 ASP n 1 82 GLU n 1 83 TRP n 1 84 ALA n 1 85 ASP n 1 86 GLU n 1 87 ASN n 1 88 GLY n 1 89 ASP n 1 90 LEU n 1 91 GLY n 1 92 PRO n 1 93 VAL n 1 94 TYR n 1 95 GLY n 1 96 LYS n 1 97 GLN n 1 98 TRP n 1 99 ARG n 1 100 ALA n 1 101 TRP n 1 102 PRO n 1 103 THR n 1 104 PRO n 1 105 ASP n 1 106 GLY n 1 107 ARG n 1 108 HIS n 1 109 ILE n 1 110 ASP n 1 111 GLN n 1 112 ILE n 1 113 THR n 1 114 THR n 1 115 VAL n 1 116 LEU n 1 117 ASN n 1 118 GLN n 1 119 LEU n 1 120 LYS n 1 121 ASN n 1 122 ASP n 1 123 PRO n 1 124 ASP n 1 125 SER n 1 126 ARG n 1 127 ARG n 1 128 ILE n 1 129 ILE n 1 130 VAL n 1 131 SER n 1 132 ALA n 1 133 TRP n 1 134 ASN n 1 135 VAL n 1 136 GLY n 1 137 GLU n 1 138 LEU n 1 139 ASP n 1 140 LYS n 1 141 MET n 1 142 ALA n 1 143 LEU n 1 144 ALA n 1 145 PRO n 1 146 CYS n 1 147 HIS n 1 148 ALA n 1 149 PHE n 1 150 PHE n 1 151 GLN n 1 152 PHE n 1 153 TYR n 1 154 VAL n 1 155 ALA n 1 156 ASP n 1 157 GLY n 1 158 LYS n 1 159 LEU n 1 160 SER n 1 161 CYS n 1 162 GLN n 1 163 LEU n 1 164 TYR n 1 165 GLN n 1 166 ARG n 1 167 SER n 1 168 CYS n 1 169 ASP n 1 170 VAL n 1 171 PHE n 1 172 LEU n 1 173 GLY n 1 174 LEU n 1 175 PRO n 1 176 PHE n 1 177 ASN n 1 178 ILE n 1 179 ALA n 1 180 SER n 1 181 TYR n 1 182 ALA n 1 183 LEU n 1 184 LEU n 1 185 VAL n 1 186 HIS n 1 187 MET n 1 188 MET n 1 189 ALA n 1 190 GLN n 1 191 GLN n 1 192 CYS n 1 193 ASP n 1 194 LEU n 1 195 GLU n 1 196 VAL n 1 197 GLY n 1 198 ASP n 1 199 PHE n 1 200 VAL n 1 201 TRP n 1 202 THR n 1 203 GLY n 1 204 GLY n 1 205 ASP n 1 206 THR n 1 207 HIS n 1 208 LEU n 1 209 TYR n 1 210 SER n 1 211 ASN n 1 212 HIS n 1 213 MET n 1 214 ASP n 1 215 GLN n 1 216 THR n 1 217 HIS n 1 218 LEU n 1 219 GLN n 1 220 LEU n 1 221 SER n 1 222 ARG n 1 223 GLU n 1 224 PRO n 1 225 ARG n 1 226 PRO n 1 227 LEU n 1 228 PRO n 1 229 LYS n 1 230 LEU n 1 231 ILE n 1 232 ILE n 1 233 LYS n 1 234 ARG n 1 235 LYS n 1 236 PRO n 1 237 GLU n 1 238 SER n 1 239 ILE n 1 240 PHE n 1 241 ASP n 1 242 TYR n 1 243 ARG n 1 244 PHE n 1 245 GLU n 1 246 ASP n 1 247 PHE n 1 248 GLU n 1 249 ILE n 1 250 GLU n 1 251 GLY n 1 252 TYR n 1 253 ASP n 1 254 PRO n 1 255 HIS n 1 256 PRO n 1 257 GLY n 1 258 ILE n 1 259 LYS n 1 260 ALA n 1 261 PRO n 1 262 VAL n 1 263 ALA n 1 264 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain BL21 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 511693 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET17B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TYSY_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P0A884 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VF0 A 1 ? 264 ? P0A884 1 ? 264 ? 1 264 2 1 2VF0 B 1 ? 264 ? P0A884 1 ? 264 ? 1 264 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2VF0 GLN A 48 ? UNP P0A884 LYS 48 'engineered mutation' 48 1 2 2VF0 GLN B 48 ? UNP P0A884 LYS 48 'engineered mutation' 48 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CXM 'L-peptide linking' n N-CARBOXYMETHIONINE ? 'C6 H11 N O4 S' 193.221 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 F89 non-polymer . 'S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN-9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID' 'FOLATE ANALOG 1843U89' 'C27 H24 N4 O6' 500.503 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NDU 'DNA linking' n ;2'-DEOXY-5-NITROURIDINE 5'-MONOPHOSPHATE ; ? 'C9 H14 N3 O10 P' 355.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VF0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_percent_sol 54 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20 MM POTASSIUM PHOSPHATE BUFFER, 4 MM DTT AND INCREMENTS IN AMMONIUM SULFATE FROM 2.05 TO 2.6 M, PH 7.5 TO 8' # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type ENRAF-NONIUS _diffrn_detector.pdbx_collection_date 1999-11-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ENRAF-NONIUS FR571' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VF0 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.58 _reflns.d_resolution_high 2.70 _reflns.number_obs 15793 _reflns.number_all ? _reflns.percent_possible_obs 95.1 _reflns.pdbx_Rmerge_I_obs 0.17 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 3.70 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VF0 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12094 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2316773.83 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.98 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 95.1 _refine.ls_R_factor_obs 0.180 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.180 _refine.ls_R_factor_R_free 0.239 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 611 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 20.1 _refine.aniso_B[1][1] -3.18 _refine.aniso_B[2][2] -3.18 _refine.aniso_B[3][3] 6.37 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 28.1663 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRIES 1FFL AND 1FWM' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD TARGET USING AMPLITUDES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2VF0 _refine_analyze.Luzzati_coordinate_error_obs 0.29 _refine_analyze.Luzzati_sigma_a_obs 0.47 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.40 _refine_analyze.Luzzati_sigma_a_free 0.58 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4306 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 125 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 4460 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 33.98 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.90 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.99 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.73 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.45 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.36 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 1802 _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.percent_reflns_obs 89.3 _refine_ls_shell.R_factor_R_free 0.350 _refine_ls_shell.R_factor_R_free_error 0.037 _refine_ls_shell.percent_reflns_R_free 4.8 _refine_ls_shell.number_reflns_R_free 91 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 U89.PAR U89.TOP 'X-RAY DIFFRACTION' 4 LIGAND.PAR LIGAND2.TOP 'X-RAY DIFFRACTION' 5 ION.PARAM ION.TOP # _struct.entry_id 2VF0 _struct.title 'CRYSTAL STRUCTURE OF THE THYMIDYLATE SYNTHASE K48Q COMPLEXED WITH 5NO2DUMP AND BW1843U89' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VF0 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;NUCLEOTIDE BIOSYNTHESIS, SUBSTRATE ANOLOGUE, ANTIFOLATE BINDING, RNA-BINDING, TRANSFERASE, METHYLTRANSFERASE, REPRESSOR, BW1843U89, CYTOPLASM, 5-NO2-DUMP, THYMIDYLATE SYNTHASE, TRANSLATION REGULATION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CXM A 1 ? GLY A 15 ? CXM A 1 GLY A 15 1 ? 15 HELX_P HELX_P2 2 HIS A 51 ? GLY A 65 ? HIS A 51 GLY A 65 1 ? 15 HELX_P HELX_P3 3 ILE A 69 ? GLU A 74 ? ILE A 69 GLU A 74 1 ? 6 HELX_P HELX_P4 4 TRP A 80 ? ALA A 84 ? TRP A 80 ALA A 84 5 ? 5 HELX_P HELX_P5 5 VAL A 93 ? ALA A 100 ? VAL A 93 ALA A 100 1 ? 8 HELX_P HELX_P6 6 ASP A 110 ? ASP A 122 ? ASP A 110 ASP A 122 1 ? 13 HELX_P HELX_P7 7 GLU A 137 ? MET A 141 ? GLU A 137 MET A 141 5 ? 5 HELX_P HELX_P8 8 LEU A 172 ? ASP A 193 ? LEU A 172 ASP A 193 1 ? 22 HELX_P HELX_P9 9 HIS A 212 ? SER A 221 ? HIS A 212 SER A 221 1 ? 10 HELX_P HELX_P10 10 SER A 238 ? TYR A 242 ? SER A 238 TYR A 242 5 ? 5 HELX_P HELX_P11 11 ARG A 243 ? GLU A 245 ? ARG A 243 GLU A 245 5 ? 3 HELX_P HELX_P12 12 CXM B 1 ? GLY B 15 ? CXM B 1 GLY B 15 1 ? 15 HELX_P HELX_P13 13 GLN B 39 ? GLY B 41 ? GLN B 39 GLY B 41 5 ? 3 HELX_P HELX_P14 14 HIS B 51 ? GLN B 64 ? HIS B 51 GLN B 64 1 ? 14 HELX_P HELX_P15 15 ILE B 69 ? GLU B 74 ? ILE B 69 GLU B 74 1 ? 6 HELX_P HELX_P16 16 VAL B 93 ? ALA B 100 ? VAL B 93 ALA B 100 1 ? 8 HELX_P HELX_P17 17 ASP B 110 ? ASP B 122 ? ASP B 110 ASP B 122 1 ? 13 HELX_P HELX_P18 18 ASN B 134 ? MET B 141 ? ASN B 134 MET B 141 5 ? 8 HELX_P HELX_P19 19 GLY B 173 ? CYS B 192 ? GLY B 173 CYS B 192 1 ? 20 HELX_P HELX_P20 20 HIS B 212 ? SER B 221 ? HIS B 212 SER B 221 1 ? 10 HELX_P HELX_P21 21 ARG B 243 ? GLU B 245 ? ARG B 243 GLU B 245 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A CXM 1 C ? ? ? 1_555 A LYS 2 N ? ? A CXM 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale2 covale none ? A CYS 146 SG ? ? ? 1_555 C NDU . C6 ? ? A CYS 146 A NDU 1265 1_555 ? ? ? ? ? ? ? 1.929 ? ? covale3 covale both ? B CXM 1 C ? ? ? 1_555 B LYS 2 N ? ? B CXM 1 B LYS 2 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale4 covale none ? B CYS 146 SG ? ? ? 1_555 E NDU . C6 ? ? B CYS 146 B NDU 1265 1_555 ? ? ? ? ? ? ? 1.874 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 2 ? AC ? 2 ? BA ? 6 ? BB ? 2 ? BC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? parallel BA 4 5 ? anti-parallel BA 5 6 ? anti-parallel BB 1 2 ? anti-parallel BC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 16 ? LYS A 18 ? THR A 16 LYS A 18 AA 2 THR A 26 ? ASN A 37 ? THR A 26 ASN A 37 AA 3 GLU A 195 ? TYR A 209 ? GLU A 195 TYR A 209 AA 4 LYS A 158 ? ASP A 169 ? LYS A 158 ASP A 169 AA 5 HIS A 147 ? ALA A 155 ? HIS A 147 ALA A 155 AA 6 ILE A 129 ? SER A 131 ? ILE A 129 SER A 131 AB 1 TRP A 101 ? PRO A 102 ? TRP A 101 PRO A 102 AB 2 HIS A 108 ? ILE A 109 ? HIS A 108 ILE A 109 AC 1 LYS A 229 ? ILE A 232 ? LYS A 229 ILE A 232 AC 2 PHE A 247 ? GLU A 250 ? PHE A 247 GLU A 250 BA 1 THR B 16 ? LYS B 18 ? THR B 16 LYS B 18 BA 2 THR B 26 ? ASN B 37 ? THR B 26 ASN B 37 BA 3 GLU B 195 ? TYR B 209 ? GLU B 195 TYR B 209 BA 4 LYS B 158 ? ASP B 169 ? LYS B 158 ASP B 169 BA 5 HIS B 147 ? ALA B 155 ? HIS B 147 ALA B 155 BA 6 ILE B 129 ? SER B 131 ? ILE B 129 SER B 131 BB 1 TRP B 101 ? PRO B 102 ? TRP B 101 PRO B 102 BB 2 HIS B 108 ? ILE B 109 ? HIS B 108 ILE B 109 BC 1 LYS B 229 ? ILE B 232 ? LYS B 229 ILE B 232 BC 2 PHE B 247 ? GLU B 250 ? PHE B 247 GLU B 250 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LYS A 18 ? N LYS A 18 O THR A 26 ? O THR A 26 AA 2 3 N PHE A 36 ? N PHE A 36 O PHE A 199 ? O PHE A 199 AA 3 4 N GLY A 197 ? N GLY A 197 O LEU A 159 ? O LEU A 159 AA 4 5 N TYR A 164 ? N TYR A 164 O PHE A 149 ? O PHE A 149 AA 5 6 N PHE A 150 ? N PHE A 150 O VAL A 130 ? O VAL A 130 AB 1 2 N TRP A 101 ? N TRP A 101 O ILE A 109 ? O ILE A 109 AC 1 2 N ILE A 231 ? N ILE A 231 O GLU A 248 ? O GLU A 248 BA 1 2 N LYS B 18 ? N LYS B 18 O THR B 26 ? O THR B 26 BA 2 3 N PHE B 36 ? N PHE B 36 O PHE B 199 ? O PHE B 199 BA 3 4 N GLY B 197 ? N GLY B 197 O LEU B 159 ? O LEU B 159 BA 4 5 O TYR B 164 ? O TYR B 164 N ALA B 148 ? N ALA B 148 BA 5 6 N PHE B 150 ? N PHE B 150 O VAL B 130 ? O VAL B 130 BB 1 2 N TRP B 101 ? N TRP B 101 O ILE B 109 ? O ILE B 109 BC 1 2 N ILE B 231 ? N ILE B 231 O GLU B 248 ? O GLU B 248 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE NDU A1265' AC2 Software ? ? ? ? 14 'BINDING SITE FOR RESIDUE F89 A1266' AC3 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE NDU B1265' AC4 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE F89 B1266' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 B1268' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 ARG A 21 ? ARG A 21 . ? 1_555 ? 2 AC1 17 TRP A 80 ? TRP A 80 . ? 1_555 ? 3 AC1 17 TYR A 94 ? TYR A 94 . ? 1_555 ? 4 AC1 17 CYS A 146 ? CYS A 146 . ? 1_555 ? 5 AC1 17 HIS A 147 ? HIS A 147 . ? 1_555 ? 6 AC1 17 GLN A 165 ? GLN A 165 . ? 1_555 ? 7 AC1 17 ARG A 166 ? ARG A 166 . ? 1_555 ? 8 AC1 17 SER A 167 ? SER A 167 . ? 1_555 ? 9 AC1 17 CYS A 168 ? CYS A 168 . ? 1_555 ? 10 AC1 17 ASP A 169 ? ASP A 169 . ? 1_555 ? 11 AC1 17 ASN A 177 ? ASN A 177 . ? 1_555 ? 12 AC1 17 HIS A 207 ? HIS A 207 . ? 1_555 ? 13 AC1 17 TYR A 209 ? TYR A 209 . ? 1_555 ? 14 AC1 17 F89 D . ? F89 A 1266 . ? 1_555 ? 15 AC1 17 HOH H . ? HOH A 2013 . ? 1_555 ? 16 AC1 17 ARG B 126 ? ARG B 126 . ? 1_555 ? 17 AC1 17 ARG B 127 ? ARG B 127 . ? 1_555 ? 18 AC2 14 SER A 54 ? SER A 54 . ? 1_555 ? 19 AC2 14 GLU A 58 ? GLU A 58 . ? 1_555 ? 20 AC2 14 THR A 78 ? THR A 78 . ? 1_555 ? 21 AC2 14 ILE A 79 ? ILE A 79 . ? 1_555 ? 22 AC2 14 TRP A 80 ? TRP A 80 . ? 1_555 ? 23 AC2 14 TRP A 83 ? TRP A 83 . ? 1_555 ? 24 AC2 14 ASP A 169 ? ASP A 169 . ? 1_555 ? 25 AC2 14 LEU A 172 ? LEU A 172 . ? 1_555 ? 26 AC2 14 GLY A 173 ? GLY A 173 . ? 1_555 ? 27 AC2 14 PHE A 176 ? PHE A 176 . ? 1_555 ? 28 AC2 14 TYR A 209 ? TYR A 209 . ? 1_555 ? 29 AC2 14 ALA A 263 ? ALA A 263 . ? 1_555 ? 30 AC2 14 NDU C . ? NDU A 1265 . ? 1_555 ? 31 AC2 14 HOH H . ? HOH A 2004 . ? 1_555 ? 32 AC3 16 ARG A 126 ? ARG A 126 . ? 1_555 ? 33 AC3 16 ARG A 127 ? ARG A 127 . ? 1_555 ? 34 AC3 16 ARG B 21 ? ARG B 21 . ? 1_555 ? 35 AC3 16 TRP B 80 ? TRP B 80 . ? 1_555 ? 36 AC3 16 TYR B 94 ? TYR B 94 . ? 1_555 ? 37 AC3 16 CYS B 146 ? CYS B 146 . ? 1_555 ? 38 AC3 16 HIS B 147 ? HIS B 147 . ? 1_555 ? 39 AC3 16 GLN B 165 ? GLN B 165 . ? 1_555 ? 40 AC3 16 ARG B 166 ? ARG B 166 . ? 1_555 ? 41 AC3 16 SER B 167 ? SER B 167 . ? 1_555 ? 42 AC3 16 CYS B 168 ? CYS B 168 . ? 1_555 ? 43 AC3 16 ASP B 169 ? ASP B 169 . ? 1_555 ? 44 AC3 16 ASN B 177 ? ASN B 177 . ? 1_555 ? 45 AC3 16 HIS B 207 ? HIS B 207 . ? 1_555 ? 46 AC3 16 TYR B 209 ? TYR B 209 . ? 1_555 ? 47 AC3 16 F89 F . ? F89 B 1266 . ? 1_555 ? 48 AC4 13 CYS B 50 ? CYS B 50 . ? 1_555 ? 49 AC4 13 HIS B 51 ? HIS B 51 . ? 1_555 ? 50 AC4 13 SER B 54 ? SER B 54 . ? 1_555 ? 51 AC4 13 GLU B 58 ? GLU B 58 . ? 1_555 ? 52 AC4 13 TRP B 80 ? TRP B 80 . ? 1_555 ? 53 AC4 13 TRP B 83 ? TRP B 83 . ? 1_555 ? 54 AC4 13 ASP B 169 ? ASP B 169 . ? 1_555 ? 55 AC4 13 LEU B 172 ? LEU B 172 . ? 1_555 ? 56 AC4 13 GLY B 173 ? GLY B 173 . ? 1_555 ? 57 AC4 13 PHE B 176 ? PHE B 176 . ? 1_555 ? 58 AC4 13 TYR B 209 ? TYR B 209 . ? 1_555 ? 59 AC4 13 ALA B 263 ? ALA B 263 . ? 1_555 ? 60 AC4 13 NDU E . ? NDU B 1265 . ? 1_555 ? 61 AC5 4 ARG A 234 ? ARG A 234 . ? 1_555 ? 62 AC5 4 ARG A 243 ? ARG A 243 . ? 1_555 ? 63 AC5 4 ARG B 107 ? ARG B 107 . ? 1_555 ? 64 AC5 4 HIS B 108 ? HIS B 108 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VF0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VF0 _atom_sites.fract_transf_matrix[1][1] 0.007864 _atom_sites.fract_transf_matrix[1][2] 0.004540 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009081 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014717 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CXM 1 1 1 CXM CXM A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 MET 34 34 34 MET MET A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 GLN 39 39 39 GLN GLN A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 TRP 61 61 61 TRP TRP A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 ASN 76 76 76 ASN ASN A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 TRP 80 80 80 TRP TRP A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 TRP 83 83 83 TRP TRP A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 TRP 98 98 98 TRP TRP A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 TRP 101 101 101 TRP TRP A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 HIS 108 108 108 HIS HIS A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 ASN 121 121 121 ASN ASN A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 ASN 134 134 134 ASN ASN A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 MET 141 141 141 MET MET A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 CYS 146 146 146 CYS CYS A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 PHE 149 149 149 PHE PHE A . n A 1 150 PHE 150 150 150 PHE PHE A . n A 1 151 GLN 151 151 151 GLN GLN A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 TYR 153 153 153 TYR TYR A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 GLY 157 157 157 GLY GLY A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 CYS 161 161 161 CYS CYS A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 TYR 164 164 164 TYR TYR A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 CYS 168 168 168 CYS CYS A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 TYR 181 181 181 TYR TYR A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 HIS 186 186 186 HIS HIS A . n A 1 187 MET 187 187 187 MET MET A . n A 1 188 MET 188 188 188 MET MET A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 GLN 191 191 191 GLN GLN A . n A 1 192 CYS 192 192 192 CYS CYS A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 PHE 199 199 199 PHE PHE A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 TRP 201 201 201 TRP TRP A . n A 1 202 THR 202 202 202 THR THR A . n A 1 203 GLY 203 203 203 GLY GLY A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 ASP 205 205 205 ASP ASP A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 HIS 207 207 207 HIS HIS A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 ASN 211 211 211 ASN ASN A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 MET 213 213 213 MET MET A . n A 1 214 ASP 214 214 214 ASP ASP A . n A 1 215 GLN 215 215 215 GLN GLN A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 HIS 217 217 217 HIS HIS A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LEU 220 220 220 LEU LEU A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 PRO 224 224 224 PRO PRO A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 PRO 226 226 226 PRO PRO A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 PRO 228 228 228 PRO PRO A . n A 1 229 LYS 229 229 229 LYS LYS A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 ILE 231 231 231 ILE ILE A . n A 1 232 ILE 232 232 232 ILE ILE A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 LYS 235 235 235 LYS LYS A . n A 1 236 PRO 236 236 236 PRO PRO A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 SER 238 238 238 SER SER A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 PHE 240 240 240 PHE PHE A . n A 1 241 ASP 241 241 241 ASP ASP A . n A 1 242 TYR 242 242 242 TYR TYR A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 PHE 244 244 244 PHE PHE A . n A 1 245 GLU 245 245 245 GLU GLU A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 PHE 247 247 247 PHE PHE A . n A 1 248 GLU 248 248 248 GLU GLU A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 GLU 250 250 250 GLU GLU A . n A 1 251 GLY 251 251 251 GLY GLY A . n A 1 252 TYR 252 252 252 TYR TYR A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 PRO 254 254 254 PRO PRO A . n A 1 255 HIS 255 255 255 HIS HIS A . n A 1 256 PRO 256 256 256 PRO PRO A . n A 1 257 GLY 257 257 257 GLY GLY A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 LYS 259 259 259 LYS LYS A . n A 1 260 ALA 260 260 260 ALA ALA A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 VAL 262 262 262 VAL VAL A . n A 1 263 ALA 263 263 263 ALA ALA A . n A 1 264 ILE 264 264 264 ILE ILE A . n B 1 1 CXM 1 1 1 CXM CXM B . n B 1 2 LYS 2 2 2 LYS LYS B . n B 1 3 GLN 3 3 3 GLN GLN B . n B 1 4 TYR 4 4 4 TYR TYR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 MET 8 8 8 MET MET B . n B 1 9 GLN 9 9 9 GLN GLN B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 ASP 13 13 13 ASP ASP B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 GLN 17 17 17 GLN GLN B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 ASN 19 19 19 ASN ASN B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 THR 24 24 24 THR THR B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 ILE 29 29 29 ILE ILE B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 HIS 32 32 32 HIS HIS B . n B 1 33 GLN 33 33 33 GLN GLN B . n B 1 34 MET 34 34 34 MET MET B . n B 1 35 ARG 35 35 35 ARG ARG B . n B 1 36 PHE 36 36 36 PHE PHE B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 GLN 39 39 39 GLN GLN B . n B 1 40 ASP 40 40 40 ASP ASP B . n B 1 41 GLY 41 41 41 GLY GLY B . n B 1 42 PHE 42 42 42 PHE PHE B . n B 1 43 PRO 43 43 43 PRO PRO B . n B 1 44 LEU 44 44 44 LEU LEU B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 THR 46 46 46 THR THR B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 GLN 48 48 48 GLN GLN B . n B 1 49 ARG 49 49 49 ARG ARG B . n B 1 50 CYS 50 50 50 CYS CYS B . n B 1 51 HIS 51 51 51 HIS HIS B . n B 1 52 LEU 52 52 52 LEU LEU B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 SER 54 54 54 SER SER B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 ILE 56 56 56 ILE ILE B . n B 1 57 HIS 57 57 57 HIS HIS B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 LEU 60 60 60 LEU LEU B . n B 1 61 TRP 61 61 61 TRP TRP B . n B 1 62 PHE 62 62 62 PHE PHE B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 GLN 64 64 64 GLN GLN B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 THR 67 67 67 THR THR B . n B 1 68 ASN 68 68 68 ASN ASN B . n B 1 69 ILE 69 69 69 ILE ILE B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 TYR 71 71 71 TYR TYR B . n B 1 72 LEU 72 72 72 LEU LEU B . n B 1 73 HIS 73 73 73 HIS HIS B . n B 1 74 GLU 74 74 74 GLU GLU B . n B 1 75 ASN 75 75 75 ASN ASN B . n B 1 76 ASN 76 76 76 ASN ASN B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 THR 78 78 78 THR THR B . n B 1 79 ILE 79 79 79 ILE ILE B . n B 1 80 TRP 80 80 80 TRP TRP B . n B 1 81 ASP 81 81 81 ASP ASP B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 TRP 83 83 83 TRP TRP B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 GLU 86 86 86 GLU GLU B . n B 1 87 ASN 87 87 87 ASN ASN B . n B 1 88 GLY 88 88 88 GLY GLY B . n B 1 89 ASP 89 89 89 ASP ASP B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 GLY 91 91 91 GLY GLY B . n B 1 92 PRO 92 92 92 PRO PRO B . n B 1 93 VAL 93 93 93 VAL VAL B . n B 1 94 TYR 94 94 94 TYR TYR B . n B 1 95 GLY 95 95 95 GLY GLY B . n B 1 96 LYS 96 96 96 LYS LYS B . n B 1 97 GLN 97 97 97 GLN GLN B . n B 1 98 TRP 98 98 98 TRP TRP B . n B 1 99 ARG 99 99 99 ARG ARG B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 TRP 101 101 101 TRP TRP B . n B 1 102 PRO 102 102 102 PRO PRO B . n B 1 103 THR 103 103 103 THR THR B . n B 1 104 PRO 104 104 104 PRO PRO B . n B 1 105 ASP 105 105 105 ASP ASP B . n B 1 106 GLY 106 106 106 GLY GLY B . n B 1 107 ARG 107 107 107 ARG ARG B . n B 1 108 HIS 108 108 108 HIS HIS B . n B 1 109 ILE 109 109 109 ILE ILE B . n B 1 110 ASP 110 110 110 ASP ASP B . n B 1 111 GLN 111 111 111 GLN GLN B . n B 1 112 ILE 112 112 112 ILE ILE B . n B 1 113 THR 113 113 113 THR THR B . n B 1 114 THR 114 114 114 THR THR B . n B 1 115 VAL 115 115 115 VAL VAL B . n B 1 116 LEU 116 116 116 LEU LEU B . n B 1 117 ASN 117 117 117 ASN ASN B . n B 1 118 GLN 118 118 118 GLN GLN B . n B 1 119 LEU 119 119 119 LEU LEU B . n B 1 120 LYS 120 120 120 LYS LYS B . n B 1 121 ASN 121 121 121 ASN ASN B . n B 1 122 ASP 122 122 122 ASP ASP B . n B 1 123 PRO 123 123 123 PRO PRO B . n B 1 124 ASP 124 124 124 ASP ASP B . n B 1 125 SER 125 125 125 SER SER B . n B 1 126 ARG 126 126 126 ARG ARG B . n B 1 127 ARG 127 127 127 ARG ARG B . n B 1 128 ILE 128 128 128 ILE ILE B . n B 1 129 ILE 129 129 129 ILE ILE B . n B 1 130 VAL 130 130 130 VAL VAL B . n B 1 131 SER 131 131 131 SER SER B . n B 1 132 ALA 132 132 132 ALA ALA B . n B 1 133 TRP 133 133 133 TRP TRP B . n B 1 134 ASN 134 134 134 ASN ASN B . n B 1 135 VAL 135 135 135 VAL VAL B . n B 1 136 GLY 136 136 136 GLY GLY B . n B 1 137 GLU 137 137 137 GLU GLU B . n B 1 138 LEU 138 138 138 LEU LEU B . n B 1 139 ASP 139 139 139 ASP ASP B . n B 1 140 LYS 140 140 140 LYS LYS B . n B 1 141 MET 141 141 141 MET MET B . n B 1 142 ALA 142 142 142 ALA ALA B . n B 1 143 LEU 143 143 143 LEU LEU B . n B 1 144 ALA 144 144 144 ALA ALA B . n B 1 145 PRO 145 145 145 PRO PRO B . n B 1 146 CYS 146 146 146 CYS CYS B . n B 1 147 HIS 147 147 147 HIS HIS B . n B 1 148 ALA 148 148 148 ALA ALA B . n B 1 149 PHE 149 149 149 PHE PHE B . n B 1 150 PHE 150 150 150 PHE PHE B . n B 1 151 GLN 151 151 151 GLN GLN B . n B 1 152 PHE 152 152 152 PHE PHE B . n B 1 153 TYR 153 153 153 TYR TYR B . n B 1 154 VAL 154 154 154 VAL VAL B . n B 1 155 ALA 155 155 155 ALA ALA B . n B 1 156 ASP 156 156 156 ASP ASP B . n B 1 157 GLY 157 157 157 GLY GLY B . n B 1 158 LYS 158 158 158 LYS LYS B . n B 1 159 LEU 159 159 159 LEU LEU B . n B 1 160 SER 160 160 160 SER SER B . n B 1 161 CYS 161 161 161 CYS CYS B . n B 1 162 GLN 162 162 162 GLN GLN B . n B 1 163 LEU 163 163 163 LEU LEU B . n B 1 164 TYR 164 164 164 TYR TYR B . n B 1 165 GLN 165 165 165 GLN GLN B . n B 1 166 ARG 166 166 166 ARG ARG B . n B 1 167 SER 167 167 167 SER SER B . n B 1 168 CYS 168 168 168 CYS CYS B . n B 1 169 ASP 169 169 169 ASP ASP B . n B 1 170 VAL 170 170 170 VAL VAL B . n B 1 171 PHE 171 171 171 PHE PHE B . n B 1 172 LEU 172 172 172 LEU LEU B . n B 1 173 GLY 173 173 173 GLY GLY B . n B 1 174 LEU 174 174 174 LEU LEU B . n B 1 175 PRO 175 175 175 PRO PRO B . n B 1 176 PHE 176 176 176 PHE PHE B . n B 1 177 ASN 177 177 177 ASN ASN B . n B 1 178 ILE 178 178 178 ILE ILE B . n B 1 179 ALA 179 179 179 ALA ALA B . n B 1 180 SER 180 180 180 SER SER B . n B 1 181 TYR 181 181 181 TYR TYR B . n B 1 182 ALA 182 182 182 ALA ALA B . n B 1 183 LEU 183 183 183 LEU LEU B . n B 1 184 LEU 184 184 184 LEU LEU B . n B 1 185 VAL 185 185 185 VAL VAL B . n B 1 186 HIS 186 186 186 HIS HIS B . n B 1 187 MET 187 187 187 MET MET B . n B 1 188 MET 188 188 188 MET MET B . n B 1 189 ALA 189 189 189 ALA ALA B . n B 1 190 GLN 190 190 190 GLN GLN B . n B 1 191 GLN 191 191 191 GLN GLN B . n B 1 192 CYS 192 192 192 CYS CYS B . n B 1 193 ASP 193 193 193 ASP ASP B . n B 1 194 LEU 194 194 194 LEU LEU B . n B 1 195 GLU 195 195 195 GLU GLU B . n B 1 196 VAL 196 196 196 VAL VAL B . n B 1 197 GLY 197 197 197 GLY GLY B . n B 1 198 ASP 198 198 198 ASP ASP B . n B 1 199 PHE 199 199 199 PHE PHE B . n B 1 200 VAL 200 200 200 VAL VAL B . n B 1 201 TRP 201 201 201 TRP TRP B . n B 1 202 THR 202 202 202 THR THR B . n B 1 203 GLY 203 203 203 GLY GLY B . n B 1 204 GLY 204 204 204 GLY GLY B . n B 1 205 ASP 205 205 205 ASP ASP B . n B 1 206 THR 206 206 206 THR THR B . n B 1 207 HIS 207 207 207 HIS HIS B . n B 1 208 LEU 208 208 208 LEU LEU B . n B 1 209 TYR 209 209 209 TYR TYR B . n B 1 210 SER 210 210 210 SER SER B . n B 1 211 ASN 211 211 211 ASN ASN B . n B 1 212 HIS 212 212 212 HIS HIS B . n B 1 213 MET 213 213 213 MET MET B . n B 1 214 ASP 214 214 214 ASP ASP B . n B 1 215 GLN 215 215 215 GLN GLN B . n B 1 216 THR 216 216 216 THR THR B . n B 1 217 HIS 217 217 217 HIS HIS B . n B 1 218 LEU 218 218 218 LEU LEU B . n B 1 219 GLN 219 219 219 GLN GLN B . n B 1 220 LEU 220 220 220 LEU LEU B . n B 1 221 SER 221 221 221 SER SER B . n B 1 222 ARG 222 222 222 ARG ARG B . n B 1 223 GLU 223 223 223 GLU GLU B . n B 1 224 PRO 224 224 224 PRO PRO B . n B 1 225 ARG 225 225 225 ARG ARG B . n B 1 226 PRO 226 226 226 PRO PRO B . n B 1 227 LEU 227 227 227 LEU LEU B . n B 1 228 PRO 228 228 228 PRO PRO B . n B 1 229 LYS 229 229 229 LYS LYS B . n B 1 230 LEU 230 230 230 LEU LEU B . n B 1 231 ILE 231 231 231 ILE ILE B . n B 1 232 ILE 232 232 232 ILE ILE B . n B 1 233 LYS 233 233 233 LYS LYS B . n B 1 234 ARG 234 234 234 ARG ARG B . n B 1 235 LYS 235 235 235 LYS LYS B . n B 1 236 PRO 236 236 236 PRO PRO B . n B 1 237 GLU 237 237 237 GLU GLU B . n B 1 238 SER 238 238 238 SER SER B . n B 1 239 ILE 239 239 239 ILE ILE B . n B 1 240 PHE 240 240 240 PHE PHE B . n B 1 241 ASP 241 241 241 ASP ASP B . n B 1 242 TYR 242 242 242 TYR TYR B . n B 1 243 ARG 243 243 243 ARG ARG B . n B 1 244 PHE 244 244 244 PHE PHE B . n B 1 245 GLU 245 245 245 GLU GLU B . n B 1 246 ASP 246 246 246 ASP ASP B . n B 1 247 PHE 247 247 247 PHE PHE B . n B 1 248 GLU 248 248 248 GLU GLU B . n B 1 249 ILE 249 249 249 ILE ILE B . n B 1 250 GLU 250 250 250 GLU GLU B . n B 1 251 GLY 251 251 251 GLY GLY B . n B 1 252 TYR 252 252 252 TYR TYR B . n B 1 253 ASP 253 253 253 ASP ASP B . n B 1 254 PRO 254 254 254 PRO PRO B . n B 1 255 HIS 255 255 255 HIS HIS B . n B 1 256 PRO 256 256 256 PRO PRO B . n B 1 257 GLY 257 257 257 GLY GLY B . n B 1 258 ILE 258 258 258 ILE ILE B . n B 1 259 LYS 259 259 259 LYS LYS B . n B 1 260 ALA 260 260 260 ALA ALA B . n B 1 261 PRO 261 261 261 PRO PRO B . n B 1 262 VAL 262 262 262 VAL VAL B . n B 1 263 ALA 263 263 263 ALA ALA B . n B 1 264 ILE 264 264 264 ILE ILE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDU 1 1265 1265 NDU NDU A . D 3 F89 1 1266 1266 F89 F89 A . E 2 NDU 1 1265 1265 NDU NDU B . F 3 F89 1 1266 1266 F89 F89 B . G 4 SO4 1 1268 1268 SO4 SO4 B . H 5 HOH 1 2001 2001 HOH HOH A . H 5 HOH 2 2002 2002 HOH HOH A . H 5 HOH 3 2003 2003 HOH HOH A . H 5 HOH 4 2004 2004 HOH HOH A . H 5 HOH 5 2005 2005 HOH HOH A . H 5 HOH 6 2006 2006 HOH HOH A . H 5 HOH 7 2007 2007 HOH HOH A . H 5 HOH 8 2008 2008 HOH HOH A . H 5 HOH 9 2009 2009 HOH HOH A . H 5 HOH 10 2010 2010 HOH HOH A . H 5 HOH 11 2011 2011 HOH HOH A . H 5 HOH 12 2012 2012 HOH HOH A . H 5 HOH 13 2013 2013 HOH HOH A . I 5 HOH 1 2001 2001 HOH HOH B . I 5 HOH 2 2002 2002 HOH HOH B . I 5 HOH 3 2003 2003 HOH HOH B . I 5 HOH 4 2004 2004 HOH HOH B . I 5 HOH 5 2005 2005 HOH HOH B . I 5 HOH 6 2006 2006 HOH HOH B . I 5 HOH 7 2007 2007 HOH HOH B . I 5 HOH 8 2008 2008 HOH HOH B . I 5 HOH 9 2009 2009 HOH HOH B . I 5 HOH 10 2010 2010 HOH HOH B . I 5 HOH 11 2011 2011 HOH HOH B . I 5 HOH 12 2012 2012 HOH HOH B . I 5 HOH 13 2013 2013 HOH HOH B . I 5 HOH 14 2014 2014 HOH HOH B . I 5 HOH 15 2015 2015 HOH HOH B . I 5 HOH 16 2016 2016 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CXM 1 A CXM 1 ? MET N-CARBOXYMETHIONINE 2 B CXM 1 B CXM 1 ? MET N-CARBOXYMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4930 ? 1 MORE -26.7 ? 1 'SSA (A^2)' 24690 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-04 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-07-12 5 'Structure model' 1 4 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.2 ? 1 MADNESS 'data reduction' . ? 2 PROCOR 'data reduction' . ? 3 Agrovata 'data scaling' . ? 4 ROTAVATA 'data scaling' . ? 5 SCALA 'data scaling' . ? 6 TRUNCATE 'data scaling' . ? 7 X-PLOR phasing . ? 8 # _pdbx_entry_details.entry_id 2VF0 _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, LYS 48 TO GLN ENGINEERED RESIDUE IN CHAIN B, LYS 48 TO GLN ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;5-DIHYDROXYAMINO,2'-DEOXYURIDINE 5'-MONOPHOSPHATE (NDU): COVALENT LINK BETWEEN CYS 146 AND NDU 1265 BETWEEN ATOMS SG AND C6. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 43 ? ? -68.75 62.24 2 1 GLN A 48 ? ? -174.19 131.06 3 1 GLU A 74 ? ? -54.65 1.01 4 1 TYR A 94 ? ? -10.68 -87.56 5 1 ALA A 100 ? ? -156.83 72.60 6 1 ASP A 105 ? ? -94.20 40.00 7 1 ASP A 122 ? ? -147.71 59.50 8 1 PRO A 145 ? ? -36.07 125.35 9 1 ASP A 253 ? ? -117.82 79.81 10 1 HIS B 32 ? ? -170.07 146.24 11 1 ILE B 69 ? ? -56.43 -1.94 12 1 GLU B 74 ? ? -57.35 3.96 13 1 ILE B 79 ? ? -46.47 -18.99 14 1 ASP B 85 ? ? -78.65 -166.96 15 1 TYR B 94 ? ? -5.20 -74.65 16 1 ALA B 100 ? ? -158.46 62.54 17 1 ASP B 122 ? ? -151.56 67.49 18 1 LEU B 143 ? ? -177.45 143.51 19 1 ASN B 211 ? ? -90.65 38.26 20 1 ARG B 234 ? ? -178.99 139.89 21 1 PRO B 236 ? ? -58.80 176.48 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C5 ? A NDU 1265 ? PLANAR . 2 1 C5 ? B NDU 1265 ? PLANAR . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CXM N N N N 74 CXM CA C N S 75 CXM CB C N N 76 CXM CG C N N 77 CXM SD S N N 78 CXM CE C N N 79 CXM C C N N 80 CXM O O N N 81 CXM CN C N N 82 CXM ON1 O N N 83 CXM ON2 O N N 84 CXM OXT O N N 85 CXM H H N N 86 CXM HA H N N 87 CXM HB2 H N N 88 CXM HB3 H N N 89 CXM HG2 H N N 90 CXM HG3 H N N 91 CXM HE1 H N N 92 CXM HE2 H N N 93 CXM HE3 H N N 94 CXM HO2 H N N 95 CXM HXT H N N 96 CYS N N N N 97 CYS CA C N R 98 CYS C C N N 99 CYS O O N N 100 CYS CB C N N 101 CYS SG S N N 102 CYS OXT O N N 103 CYS H H N N 104 CYS H2 H N N 105 CYS HA H N N 106 CYS HB2 H N N 107 CYS HB3 H N N 108 CYS HG H N N 109 CYS HXT H N N 110 F89 C1 C Y N 111 F89 O1A O N N 112 F89 N2 N Y N 113 F89 C3 C Y N 114 F89 C3M C N N 115 F89 N4 N Y N 116 F89 C4A C Y N 117 F89 C5 C Y N 118 F89 C6 C Y N 119 F89 C6A C Y N 120 F89 C7 C Y N 121 F89 C8 C Y N 122 F89 C9 C Y N 123 F89 C10 C Y N 124 F89 C1B C Y N 125 F89 C1A C Y N 126 F89 C11 C N N 127 F89 N12 N N N 128 F89 C13 C Y N 129 F89 C14 C Y N 130 F89 C15 C Y N 131 F89 C16 C Y N 132 F89 C17 C Y N 133 F89 C18 C Y N 134 F89 C19 C N N 135 F89 C C N N 136 F89 O O N N 137 F89 N N N N 138 F89 CA C N S 139 F89 CT C N N 140 F89 O1 O N N 141 F89 O2 O N N 142 F89 CB C N N 143 F89 CG C N N 144 F89 CD C N N 145 F89 OE1 O N N 146 F89 OE2 O N N 147 F89 HN2 H N N 148 F89 H3M1 H N N 149 F89 H3M2 H N N 150 F89 H3M3 H N N 151 F89 H5 H N N 152 F89 H6 H N N 153 F89 H7 H N N 154 F89 H8 H N N 155 F89 H10 H N N 156 F89 H111 H N N 157 F89 H112 H N N 158 F89 HN12 H N N 159 F89 H14 H N N 160 F89 H17 H N N 161 F89 H18 H N N 162 F89 H191 H N N 163 F89 H192 H N N 164 F89 HA H N N 165 F89 HO2 H N N 166 F89 HB1 H N N 167 F89 HB2 H N N 168 F89 HG1 H N N 169 F89 HG2 H N N 170 F89 HOE2 H N N 171 GLN N N N N 172 GLN CA C N S 173 GLN C C N N 174 GLN O O N N 175 GLN CB C N N 176 GLN CG C N N 177 GLN CD C N N 178 GLN OE1 O N N 179 GLN NE2 N N N 180 GLN OXT O N N 181 GLN H H N N 182 GLN H2 H N N 183 GLN HA H N N 184 GLN HB2 H N N 185 GLN HB3 H N N 186 GLN HG2 H N N 187 GLN HG3 H N N 188 GLN HE21 H N N 189 GLN HE22 H N N 190 GLN HXT H N N 191 GLU N N N N 192 GLU CA C N S 193 GLU C C N N 194 GLU O O N N 195 GLU CB C N N 196 GLU CG C N N 197 GLU CD C N N 198 GLU OE1 O N N 199 GLU OE2 O N N 200 GLU OXT O N N 201 GLU H H N N 202 GLU H2 H N N 203 GLU HA H N N 204 GLU HB2 H N N 205 GLU HB3 H N N 206 GLU HG2 H N N 207 GLU HG3 H N N 208 GLU HE2 H N N 209 GLU HXT H N N 210 GLY N N N N 211 GLY CA C N N 212 GLY C C N N 213 GLY O O N N 214 GLY OXT O N N 215 GLY H H N N 216 GLY H2 H N N 217 GLY HA2 H N N 218 GLY HA3 H N N 219 GLY HXT H N N 220 HIS N N N N 221 HIS CA C N S 222 HIS C C N N 223 HIS O O N N 224 HIS CB C N N 225 HIS CG C Y N 226 HIS ND1 N Y N 227 HIS CD2 C Y N 228 HIS CE1 C Y N 229 HIS NE2 N Y N 230 HIS OXT O N N 231 HIS H H N N 232 HIS H2 H N N 233 HIS HA H N N 234 HIS HB2 H N N 235 HIS HB3 H N N 236 HIS HD1 H N N 237 HIS HD2 H N N 238 HIS HE1 H N N 239 HIS HE2 H N N 240 HIS HXT H N N 241 HOH O O N N 242 HOH H1 H N N 243 HOH H2 H N N 244 ILE N N N N 245 ILE CA C N S 246 ILE C C N N 247 ILE O O N N 248 ILE CB C N S 249 ILE CG1 C N N 250 ILE CG2 C N N 251 ILE CD1 C N N 252 ILE OXT O N N 253 ILE H H N N 254 ILE H2 H N N 255 ILE HA H N N 256 ILE HB H N N 257 ILE HG12 H N N 258 ILE HG13 H N N 259 ILE HG21 H N N 260 ILE HG22 H N N 261 ILE HG23 H N N 262 ILE HD11 H N N 263 ILE HD12 H N N 264 ILE HD13 H N N 265 ILE HXT H N N 266 LEU N N N N 267 LEU CA C N S 268 LEU C C N N 269 LEU O O N N 270 LEU CB C N N 271 LEU CG C N N 272 LEU CD1 C N N 273 LEU CD2 C N N 274 LEU OXT O N N 275 LEU H H N N 276 LEU H2 H N N 277 LEU HA H N N 278 LEU HB2 H N N 279 LEU HB3 H N N 280 LEU HG H N N 281 LEU HD11 H N N 282 LEU HD12 H N N 283 LEU HD13 H N N 284 LEU HD21 H N N 285 LEU HD22 H N N 286 LEU HD23 H N N 287 LEU HXT H N N 288 LYS N N N N 289 LYS CA C N S 290 LYS C C N N 291 LYS O O N N 292 LYS CB C N N 293 LYS CG C N N 294 LYS CD C N N 295 LYS CE C N N 296 LYS NZ N N N 297 LYS OXT O N N 298 LYS H H N N 299 LYS H2 H N N 300 LYS HA H N N 301 LYS HB2 H N N 302 LYS HB3 H N N 303 LYS HG2 H N N 304 LYS HG3 H N N 305 LYS HD2 H N N 306 LYS HD3 H N N 307 LYS HE2 H N N 308 LYS HE3 H N N 309 LYS HZ1 H N N 310 LYS HZ2 H N N 311 LYS HZ3 H N N 312 LYS HXT H N N 313 MET N N N N 314 MET CA C N S 315 MET C C N N 316 MET O O N N 317 MET CB C N N 318 MET CG C N N 319 MET SD S N N 320 MET CE C N N 321 MET OXT O N N 322 MET H H N N 323 MET H2 H N N 324 MET HA H N N 325 MET HB2 H N N 326 MET HB3 H N N 327 MET HG2 H N N 328 MET HG3 H N N 329 MET HE1 H N N 330 MET HE2 H N N 331 MET HE3 H N N 332 MET HXT H N N 333 NDU P P N N 334 NDU OP1 O N N 335 NDU OP2 O N N 336 NDU OP3 O N N 337 NDU "O5'" O N N 338 NDU "C5'" C N N 339 NDU "C4'" C N R 340 NDU "C3'" C N S 341 NDU "O3'" O N N 342 NDU "C2'" C N N 343 NDU "C1'" C N R 344 NDU "O4'" O N N 345 NDU N1 N N N 346 NDU C2 C N N 347 NDU O2 O N N 348 NDU N3 N N N 349 NDU C4 C N N 350 NDU O4 O N N 351 NDU C5 C N R 352 NDU C6 C N N 353 NDU N5 N N N 354 NDU O51 O N N 355 NDU O52 O N N 356 NDU HP2 H N N 357 NDU HP3 H N N 358 NDU "H51'" H N N 359 NDU "H52'" H N N 360 NDU "H4'" H N N 361 NDU "H3'" H N N 362 NDU HA H N N 363 NDU "H21'" H N N 364 NDU "H22'" H N N 365 NDU "H1'" H N N 366 NDU H611 H N N 367 NDU H612 H N N 368 NDU H3 H N N 369 NDU H5 H N N 370 PHE N N N N 371 PHE CA C N S 372 PHE C C N N 373 PHE O O N N 374 PHE CB C N N 375 PHE CG C Y N 376 PHE CD1 C Y N 377 PHE CD2 C Y N 378 PHE CE1 C Y N 379 PHE CE2 C Y N 380 PHE CZ C Y N 381 PHE OXT O N N 382 PHE H H N N 383 PHE H2 H N N 384 PHE HA H N N 385 PHE HB2 H N N 386 PHE HB3 H N N 387 PHE HD1 H N N 388 PHE HD2 H N N 389 PHE HE1 H N N 390 PHE HE2 H N N 391 PHE HZ H N N 392 PHE HXT H N N 393 PRO N N N N 394 PRO CA C N S 395 PRO C C N N 396 PRO O O N N 397 PRO CB C N N 398 PRO CG C N N 399 PRO CD C N N 400 PRO OXT O N N 401 PRO H H N N 402 PRO HA H N N 403 PRO HB2 H N N 404 PRO HB3 H N N 405 PRO HG2 H N N 406 PRO HG3 H N N 407 PRO HD2 H N N 408 PRO HD3 H N N 409 PRO HXT H N N 410 SER N N N N 411 SER CA C N S 412 SER C C N N 413 SER O O N N 414 SER CB C N N 415 SER OG O N N 416 SER OXT O N N 417 SER H H N N 418 SER H2 H N N 419 SER HA H N N 420 SER HB2 H N N 421 SER HB3 H N N 422 SER HG H N N 423 SER HXT H N N 424 SO4 S S N N 425 SO4 O1 O N N 426 SO4 O2 O N N 427 SO4 O3 O N N 428 SO4 O4 O N N 429 THR N N N N 430 THR CA C N S 431 THR C C N N 432 THR O O N N 433 THR CB C N R 434 THR OG1 O N N 435 THR CG2 C N N 436 THR OXT O N N 437 THR H H N N 438 THR H2 H N N 439 THR HA H N N 440 THR HB H N N 441 THR HG1 H N N 442 THR HG21 H N N 443 THR HG22 H N N 444 THR HG23 H N N 445 THR HXT H N N 446 TRP N N N N 447 TRP CA C N S 448 TRP C C N N 449 TRP O O N N 450 TRP CB C N N 451 TRP CG C Y N 452 TRP CD1 C Y N 453 TRP CD2 C Y N 454 TRP NE1 N Y N 455 TRP CE2 C Y N 456 TRP CE3 C Y N 457 TRP CZ2 C Y N 458 TRP CZ3 C Y N 459 TRP CH2 C Y N 460 TRP OXT O N N 461 TRP H H N N 462 TRP H2 H N N 463 TRP HA H N N 464 TRP HB2 H N N 465 TRP HB3 H N N 466 TRP HD1 H N N 467 TRP HE1 H N N 468 TRP HE3 H N N 469 TRP HZ2 H N N 470 TRP HZ3 H N N 471 TRP HH2 H N N 472 TRP HXT H N N 473 TYR N N N N 474 TYR CA C N S 475 TYR C C N N 476 TYR O O N N 477 TYR CB C N N 478 TYR CG C Y N 479 TYR CD1 C Y N 480 TYR CD2 C Y N 481 TYR CE1 C Y N 482 TYR CE2 C Y N 483 TYR CZ C Y N 484 TYR OH O N N 485 TYR OXT O N N 486 TYR H H N N 487 TYR H2 H N N 488 TYR HA H N N 489 TYR HB2 H N N 490 TYR HB3 H N N 491 TYR HD1 H N N 492 TYR HD2 H N N 493 TYR HE1 H N N 494 TYR HE2 H N N 495 TYR HH H N N 496 TYR HXT H N N 497 VAL N N N N 498 VAL CA C N S 499 VAL C C N N 500 VAL O O N N 501 VAL CB C N N 502 VAL CG1 C N N 503 VAL CG2 C N N 504 VAL OXT O N N 505 VAL H H N N 506 VAL H2 H N N 507 VAL HA H N N 508 VAL HB H N N 509 VAL HG11 H N N 510 VAL HG12 H N N 511 VAL HG13 H N N 512 VAL HG21 H N N 513 VAL HG22 H N N 514 VAL HG23 H N N 515 VAL HXT H N N 516 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CXM N CA sing N N 70 CXM N CN sing N N 71 CXM N H sing N N 72 CXM CA CB sing N N 73 CXM CA C sing N N 74 CXM CA HA sing N N 75 CXM CB CG sing N N 76 CXM CB HB2 sing N N 77 CXM CB HB3 sing N N 78 CXM CG SD sing N N 79 CXM CG HG2 sing N N 80 CXM CG HG3 sing N N 81 CXM SD CE sing N N 82 CXM CE HE1 sing N N 83 CXM CE HE2 sing N N 84 CXM CE HE3 sing N N 85 CXM C O doub N N 86 CXM C OXT sing N N 87 CXM CN ON1 doub N N 88 CXM CN ON2 sing N N 89 CXM ON2 HO2 sing N N 90 CXM OXT HXT sing N N 91 CYS N CA sing N N 92 CYS N H sing N N 93 CYS N H2 sing N N 94 CYS CA C sing N N 95 CYS CA CB sing N N 96 CYS CA HA sing N N 97 CYS C O doub N N 98 CYS C OXT sing N N 99 CYS CB SG sing N N 100 CYS CB HB2 sing N N 101 CYS CB HB3 sing N N 102 CYS SG HG sing N N 103 CYS OXT HXT sing N N 104 F89 C1 O1A doub N N 105 F89 C1 N2 sing Y N 106 F89 C1 C1A sing Y N 107 F89 N2 C3 sing Y N 108 F89 N2 HN2 sing N N 109 F89 C3 C3M sing N N 110 F89 C3 N4 doub Y N 111 F89 C3M H3M1 sing N N 112 F89 C3M H3M2 sing N N 113 F89 C3M H3M3 sing N N 114 F89 N4 C4A sing Y N 115 F89 C4A C5 doub Y N 116 F89 C4A C1A sing Y N 117 F89 C5 C6 sing Y N 118 F89 C5 H5 sing N N 119 F89 C6 C6A doub Y N 120 F89 C6 H6 sing N N 121 F89 C6A C7 sing Y N 122 F89 C6A C1B sing Y N 123 F89 C7 C8 doub Y N 124 F89 C7 H7 sing N N 125 F89 C8 C9 sing Y N 126 F89 C8 H8 sing N N 127 F89 C9 C10 doub Y N 128 F89 C9 C11 sing N N 129 F89 C10 C1B sing Y N 130 F89 C10 H10 sing N N 131 F89 C1B C1A doub Y N 132 F89 C11 N12 sing N N 133 F89 C11 H111 sing N N 134 F89 C11 H112 sing N N 135 F89 N12 C13 sing N N 136 F89 N12 HN12 sing N N 137 F89 C13 C14 doub Y N 138 F89 C13 C18 sing Y N 139 F89 C14 C15 sing Y N 140 F89 C14 H14 sing N N 141 F89 C15 C16 doub Y N 142 F89 C15 C19 sing N N 143 F89 C16 C17 sing Y N 144 F89 C16 C sing N N 145 F89 C17 C18 doub Y N 146 F89 C17 H17 sing N N 147 F89 C18 H18 sing N N 148 F89 C19 N sing N N 149 F89 C19 H191 sing N N 150 F89 C19 H192 sing N N 151 F89 C O doub N N 152 F89 C N sing N N 153 F89 N CA sing N N 154 F89 CA CT sing N N 155 F89 CA CB sing N N 156 F89 CA HA sing N N 157 F89 CT O1 doub N N 158 F89 CT O2 sing N N 159 F89 O2 HO2 sing N N 160 F89 CB CG sing N N 161 F89 CB HB1 sing N N 162 F89 CB HB2 sing N N 163 F89 CG CD sing N N 164 F89 CG HG1 sing N N 165 F89 CG HG2 sing N N 166 F89 CD OE1 doub N N 167 F89 CD OE2 sing N N 168 F89 OE2 HOE2 sing N N 169 GLN N CA sing N N 170 GLN N H sing N N 171 GLN N H2 sing N N 172 GLN CA C sing N N 173 GLN CA CB sing N N 174 GLN CA HA sing N N 175 GLN C O doub N N 176 GLN C OXT sing N N 177 GLN CB CG sing N N 178 GLN CB HB2 sing N N 179 GLN CB HB3 sing N N 180 GLN CG CD sing N N 181 GLN CG HG2 sing N N 182 GLN CG HG3 sing N N 183 GLN CD OE1 doub N N 184 GLN CD NE2 sing N N 185 GLN NE2 HE21 sing N N 186 GLN NE2 HE22 sing N N 187 GLN OXT HXT sing N N 188 GLU N CA sing N N 189 GLU N H sing N N 190 GLU N H2 sing N N 191 GLU CA C sing N N 192 GLU CA CB sing N N 193 GLU CA HA sing N N 194 GLU C O doub N N 195 GLU C OXT sing N N 196 GLU CB CG sing N N 197 GLU CB HB2 sing N N 198 GLU CB HB3 sing N N 199 GLU CG CD sing N N 200 GLU CG HG2 sing N N 201 GLU CG HG3 sing N N 202 GLU CD OE1 doub N N 203 GLU CD OE2 sing N N 204 GLU OE2 HE2 sing N N 205 GLU OXT HXT sing N N 206 GLY N CA sing N N 207 GLY N H sing N N 208 GLY N H2 sing N N 209 GLY CA C sing N N 210 GLY CA HA2 sing N N 211 GLY CA HA3 sing N N 212 GLY C O doub N N 213 GLY C OXT sing N N 214 GLY OXT HXT sing N N 215 HIS N CA sing N N 216 HIS N H sing N N 217 HIS N H2 sing N N 218 HIS CA C sing N N 219 HIS CA CB sing N N 220 HIS CA HA sing N N 221 HIS C O doub N N 222 HIS C OXT sing N N 223 HIS CB CG sing N N 224 HIS CB HB2 sing N N 225 HIS CB HB3 sing N N 226 HIS CG ND1 sing Y N 227 HIS CG CD2 doub Y N 228 HIS ND1 CE1 doub Y N 229 HIS ND1 HD1 sing N N 230 HIS CD2 NE2 sing Y N 231 HIS CD2 HD2 sing N N 232 HIS CE1 NE2 sing Y N 233 HIS CE1 HE1 sing N N 234 HIS NE2 HE2 sing N N 235 HIS OXT HXT sing N N 236 HOH O H1 sing N N 237 HOH O H2 sing N N 238 ILE N CA sing N N 239 ILE N H sing N N 240 ILE N H2 sing N N 241 ILE CA C sing N N 242 ILE CA CB sing N N 243 ILE CA HA sing N N 244 ILE C O doub N N 245 ILE C OXT sing N N 246 ILE CB CG1 sing N N 247 ILE CB CG2 sing N N 248 ILE CB HB sing N N 249 ILE CG1 CD1 sing N N 250 ILE CG1 HG12 sing N N 251 ILE CG1 HG13 sing N N 252 ILE CG2 HG21 sing N N 253 ILE CG2 HG22 sing N N 254 ILE CG2 HG23 sing N N 255 ILE CD1 HD11 sing N N 256 ILE CD1 HD12 sing N N 257 ILE CD1 HD13 sing N N 258 ILE OXT HXT sing N N 259 LEU N CA sing N N 260 LEU N H sing N N 261 LEU N H2 sing N N 262 LEU CA C sing N N 263 LEU CA CB sing N N 264 LEU CA HA sing N N 265 LEU C O doub N N 266 LEU C OXT sing N N 267 LEU CB CG sing N N 268 LEU CB HB2 sing N N 269 LEU CB HB3 sing N N 270 LEU CG CD1 sing N N 271 LEU CG CD2 sing N N 272 LEU CG HG sing N N 273 LEU CD1 HD11 sing N N 274 LEU CD1 HD12 sing N N 275 LEU CD1 HD13 sing N N 276 LEU CD2 HD21 sing N N 277 LEU CD2 HD22 sing N N 278 LEU CD2 HD23 sing N N 279 LEU OXT HXT sing N N 280 LYS N CA sing N N 281 LYS N H sing N N 282 LYS N H2 sing N N 283 LYS CA C sing N N 284 LYS CA CB sing N N 285 LYS CA HA sing N N 286 LYS C O doub N N 287 LYS C OXT sing N N 288 LYS CB CG sing N N 289 LYS CB HB2 sing N N 290 LYS CB HB3 sing N N 291 LYS CG CD sing N N 292 LYS CG HG2 sing N N 293 LYS CG HG3 sing N N 294 LYS CD CE sing N N 295 LYS CD HD2 sing N N 296 LYS CD HD3 sing N N 297 LYS CE NZ sing N N 298 LYS CE HE2 sing N N 299 LYS CE HE3 sing N N 300 LYS NZ HZ1 sing N N 301 LYS NZ HZ2 sing N N 302 LYS NZ HZ3 sing N N 303 LYS OXT HXT sing N N 304 MET N CA sing N N 305 MET N H sing N N 306 MET N H2 sing N N 307 MET CA C sing N N 308 MET CA CB sing N N 309 MET CA HA sing N N 310 MET C O doub N N 311 MET C OXT sing N N 312 MET CB CG sing N N 313 MET CB HB2 sing N N 314 MET CB HB3 sing N N 315 MET CG SD sing N N 316 MET CG HG2 sing N N 317 MET CG HG3 sing N N 318 MET SD CE sing N N 319 MET CE HE1 sing N N 320 MET CE HE2 sing N N 321 MET CE HE3 sing N N 322 MET OXT HXT sing N N 323 NDU P OP1 doub N N 324 NDU P OP2 sing N N 325 NDU P OP3 sing N N 326 NDU P "O5'" sing N N 327 NDU "O5'" "C5'" sing N N 328 NDU "C5'" "C4'" sing N N 329 NDU "C4'" "C3'" sing N N 330 NDU "C4'" "O4'" sing N N 331 NDU "C3'" "O3'" sing N N 332 NDU "C3'" "C2'" sing N N 333 NDU "C2'" "C1'" sing N N 334 NDU "C1'" "O4'" sing N N 335 NDU "C1'" N1 sing N N 336 NDU N1 C2 sing N N 337 NDU N1 C6 sing N N 338 NDU C2 O2 doub N N 339 NDU C2 N3 sing N N 340 NDU N3 C4 sing N N 341 NDU C4 O4 doub N N 342 NDU C4 C5 sing N N 343 NDU C5 C6 sing N N 344 NDU C5 N5 sing N N 345 NDU N5 O51 sing N N 346 NDU N5 O52 doub N N 347 NDU OP2 HP2 sing N N 348 NDU OP3 HP3 sing N N 349 NDU "C5'" "H51'" sing N N 350 NDU "C5'" "H52'" sing N N 351 NDU "C4'" "H4'" sing N N 352 NDU "C3'" "H3'" sing N N 353 NDU "O3'" HA sing N N 354 NDU "C2'" "H21'" sing N N 355 NDU "C2'" "H22'" sing N N 356 NDU "C1'" "H1'" sing N N 357 NDU C6 H611 sing N N 358 NDU C6 H612 sing N N 359 NDU N3 H3 sing N N 360 NDU C5 H5 sing N N 361 PHE N CA sing N N 362 PHE N H sing N N 363 PHE N H2 sing N N 364 PHE CA C sing N N 365 PHE CA CB sing N N 366 PHE CA HA sing N N 367 PHE C O doub N N 368 PHE C OXT sing N N 369 PHE CB CG sing N N 370 PHE CB HB2 sing N N 371 PHE CB HB3 sing N N 372 PHE CG CD1 doub Y N 373 PHE CG CD2 sing Y N 374 PHE CD1 CE1 sing Y N 375 PHE CD1 HD1 sing N N 376 PHE CD2 CE2 doub Y N 377 PHE CD2 HD2 sing N N 378 PHE CE1 CZ doub Y N 379 PHE CE1 HE1 sing N N 380 PHE CE2 CZ sing Y N 381 PHE CE2 HE2 sing N N 382 PHE CZ HZ sing N N 383 PHE OXT HXT sing N N 384 PRO N CA sing N N 385 PRO N CD sing N N 386 PRO N H sing N N 387 PRO CA C sing N N 388 PRO CA CB sing N N 389 PRO CA HA sing N N 390 PRO C O doub N N 391 PRO C OXT sing N N 392 PRO CB CG sing N N 393 PRO CB HB2 sing N N 394 PRO CB HB3 sing N N 395 PRO CG CD sing N N 396 PRO CG HG2 sing N N 397 PRO CG HG3 sing N N 398 PRO CD HD2 sing N N 399 PRO CD HD3 sing N N 400 PRO OXT HXT sing N N 401 SER N CA sing N N 402 SER N H sing N N 403 SER N H2 sing N N 404 SER CA C sing N N 405 SER CA CB sing N N 406 SER CA HA sing N N 407 SER C O doub N N 408 SER C OXT sing N N 409 SER CB OG sing N N 410 SER CB HB2 sing N N 411 SER CB HB3 sing N N 412 SER OG HG sing N N 413 SER OXT HXT sing N N 414 SO4 S O1 doub N N 415 SO4 S O2 doub N N 416 SO4 S O3 sing N N 417 SO4 S O4 sing N N 418 THR N CA sing N N 419 THR N H sing N N 420 THR N H2 sing N N 421 THR CA C sing N N 422 THR CA CB sing N N 423 THR CA HA sing N N 424 THR C O doub N N 425 THR C OXT sing N N 426 THR CB OG1 sing N N 427 THR CB CG2 sing N N 428 THR CB HB sing N N 429 THR OG1 HG1 sing N N 430 THR CG2 HG21 sing N N 431 THR CG2 HG22 sing N N 432 THR CG2 HG23 sing N N 433 THR OXT HXT sing N N 434 TRP N CA sing N N 435 TRP N H sing N N 436 TRP N H2 sing N N 437 TRP CA C sing N N 438 TRP CA CB sing N N 439 TRP CA HA sing N N 440 TRP C O doub N N 441 TRP C OXT sing N N 442 TRP CB CG sing N N 443 TRP CB HB2 sing N N 444 TRP CB HB3 sing N N 445 TRP CG CD1 doub Y N 446 TRP CG CD2 sing Y N 447 TRP CD1 NE1 sing Y N 448 TRP CD1 HD1 sing N N 449 TRP CD2 CE2 doub Y N 450 TRP CD2 CE3 sing Y N 451 TRP NE1 CE2 sing Y N 452 TRP NE1 HE1 sing N N 453 TRP CE2 CZ2 sing Y N 454 TRP CE3 CZ3 doub Y N 455 TRP CE3 HE3 sing N N 456 TRP CZ2 CH2 doub Y N 457 TRP CZ2 HZ2 sing N N 458 TRP CZ3 CH2 sing Y N 459 TRP CZ3 HZ3 sing N N 460 TRP CH2 HH2 sing N N 461 TRP OXT HXT sing N N 462 TYR N CA sing N N 463 TYR N H sing N N 464 TYR N H2 sing N N 465 TYR CA C sing N N 466 TYR CA CB sing N N 467 TYR CA HA sing N N 468 TYR C O doub N N 469 TYR C OXT sing N N 470 TYR CB CG sing N N 471 TYR CB HB2 sing N N 472 TYR CB HB3 sing N N 473 TYR CG CD1 doub Y N 474 TYR CG CD2 sing Y N 475 TYR CD1 CE1 sing Y N 476 TYR CD1 HD1 sing N N 477 TYR CD2 CE2 doub Y N 478 TYR CD2 HD2 sing N N 479 TYR CE1 CZ doub Y N 480 TYR CE1 HE1 sing N N 481 TYR CE2 CZ sing Y N 482 TYR CE2 HE2 sing N N 483 TYR CZ OH sing N N 484 TYR OH HH sing N N 485 TYR OXT HXT sing N N 486 VAL N CA sing N N 487 VAL N H sing N N 488 VAL N H2 sing N N 489 VAL CA C sing N N 490 VAL CA CB sing N N 491 VAL CA HA sing N N 492 VAL C O doub N N 493 VAL C OXT sing N N 494 VAL CB CG1 sing N N 495 VAL CB CG2 sing N N 496 VAL CB HB sing N N 497 VAL CG1 HG11 sing N N 498 VAL CG1 HG12 sing N N 499 VAL CG1 HG13 sing N N 500 VAL CG2 HG21 sing N N 501 VAL CG2 HG22 sing N N 502 VAL CG2 HG23 sing N N 503 VAL OXT HXT sing N N 504 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;2'-DEOXY-5-NITROURIDINE 5'-MONOPHOSPHATE ; NDU 3 'S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN-9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID' F89 4 'SULFATE ION' SO4 5 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1FFL 'PDB ENTRIES 1FFL AND 1FWM' 2 ? 'experimental model' PDB 1FWM 'PDB ENTRIES 1FFL AND 1FWM' #