HEADER TRANSFERASE 07-NOV-07 2VG0 TITLE RV1086 CITRONELLYL PYROPHOSPHATE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHORT-CHAIN Z-ISOPRENYL DIPHOSPHATE SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 30-256; COMPND 5 SYNONYM: RV1086, Z-FPP SYNTHETASE, Z-ISOPRENYL DIPHOSPHATE SYNTHASE, COMPND 6 Z-FPPS; COMPND 7 EC: 2.5.1.68; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PEPTIDOGLYCAN SYNTHESIS, CELL WALL BIOGENESIS/DEGRADATION, SECRETED, KEYWDS 2 CELL SHAPE, TRANSFERASE, PRENYLTRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.H.NAISMITH,W.WANG,C.DONG REVDAT 6 08-MAY-24 2VG0 1 REMARK REVDAT 5 07-FEB-18 2VG0 1 JRNL REVDAT 4 13-DEC-17 2VG0 1 TITLE SOURCE REVDAT 3 24-FEB-09 2VG0 1 VERSN REVDAT 2 22-JUL-08 2VG0 1 JRNL REMARK ATOM ANISOU REVDAT 1 13-NOV-07 2VG0 0 JRNL AUTH W.WANG,C.DONG,M.MCNEIL,D.KAUR,S.MAHAPATRA,D.C.CRICK, JRNL AUTH 2 J.H.NAISMITH JRNL TITL THE STRUCTURAL BASIS OF CHAIN LENGTH CONTROL IN RV1086. JRNL REF J. MOL. BIOL. V. 381 129 2008 JRNL REFN ESSN 1089-8638 JRNL PMID 18597781 JRNL DOI 10.1016/J.JMB.2008.05.060 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46921 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2505 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3414 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1620 REMARK 3 BIN FREE R VALUE SET COUNT : 197 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3556 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 483 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.191 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.391 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3683 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2474 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5007 ; 1.245 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5922 ; 0.857 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 452 ; 4.929 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;34.233 ;22.778 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 572 ;12.795 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;16.752 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 552 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4140 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 794 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 913 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2978 ; 0.207 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1866 ; 0.183 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1986 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 345 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.361 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 78 ; 0.323 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 51 ; 0.214 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2911 ; 1.356 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3598 ; 1.576 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1661 ; 2.435 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1409 ; 3.614 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 256 REMARK 3 ORIGIN FOR THE GROUP (A): 31.3750 0.1110 -3.0650 REMARK 3 T TENSOR REMARK 3 T11: -0.1074 T22: -0.1603 REMARK 3 T33: -0.1708 T12: 0.0073 REMARK 3 T13: -0.0158 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 0.9570 L22: 0.7343 REMARK 3 L33: 0.8605 L12: 0.0394 REMARK 3 L13: -0.4462 L23: 0.0955 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: 0.0188 S13: -0.1099 REMARK 3 S21: 0.1150 S22: -0.0168 S23: -0.0568 REMARK 3 S31: 0.0463 S32: 0.0254 S33: -0.0007 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 30 B 256 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3610 -1.0030 -31.9230 REMARK 3 T TENSOR REMARK 3 T11: -0.1017 T22: -0.1707 REMARK 3 T33: -0.1730 T12: -0.0023 REMARK 3 T13: 0.0200 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.0735 L22: 0.3390 REMARK 3 L33: 0.9189 L12: -0.0840 REMARK 3 L13: 0.2419 L23: 0.1271 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: -0.0588 S13: 0.0200 REMARK 3 S21: -0.0364 S22: -0.0123 S23: -0.0133 REMARK 3 S31: 0.0171 S32: -0.0317 S33: 0.0261 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VG0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1290034366. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALA REMARK 200 DATA SCALING SOFTWARE : MOSFLM REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46922 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 27.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.25850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.28050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.77050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.28050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.25850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.77050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2009 O HOH B 2258 2.08 REMARK 500 O HOH A 2031 O HOH A 2082 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2011 O HOH B 2192 3644 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 93 123.68 -39.72 REMARK 500 ARG A 217 -158.03 -76.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2015 DISTANCE = 6.20 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GPP A1257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GPP B1257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1259 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VFW RELATED DB: PDB REMARK 900 RV1086 NATIVE REMARK 900 RELATED ID: 2VG1 RELATED DB: PDB REMARK 900 RV1086 E,E-FARNESYL DIPHOSPHATE COMPLEX DBREF 2VG0 A 30 256 UNP O53434 ZFPP_MYCTU 30 256 DBREF 2VG0 B 30 256 UNP O53434 ZFPP_MYCTU 30 256 SEQRES 1 A 227 ASP LEU PRO ARG HIS ILE ALA VAL LEU CYS ASP GLY ASN SEQRES 2 A 227 ARG ARG TRP ALA ARG SER ALA GLY TYR ASP ASP VAL SER SEQRES 3 A 227 TYR GLY TYR ARG MET GLY ALA ALA LYS ILE ALA GLU MET SEQRES 4 A 227 LEU ARG TRP CYS HIS GLU ALA GLY ILE GLU LEU ALA THR SEQRES 5 A 227 VAL TYR LEU LEU SER THR GLU ASN LEU GLN ARG ASP PRO SEQRES 6 A 227 ASP GLU LEU ALA ALA LEU ILE GLU ILE ILE THR ASP VAL SEQRES 7 A 227 VAL GLU GLU ILE CYS ALA PRO ALA ASN HIS TRP SER VAL SEQRES 8 A 227 ARG THR VAL GLY ASP LEU GLY LEU ILE GLY GLU GLU PRO SEQRES 9 A 227 ALA ARG ARG LEU ARG GLY ALA VAL GLU SER THR PRO GLU SEQRES 10 A 227 VAL ALA SER PHE HIS VAL ASN VAL ALA VAL GLY TYR GLY SEQRES 11 A 227 GLY ARG ARG GLU ILE VAL ASP ALA VAL ARG ALA LEU LEU SEQRES 12 A 227 SER LYS GLU LEU ALA ASN GLY ALA THR ALA GLU GLU LEU SEQRES 13 A 227 VAL ASP ALA VAL THR VAL GLU GLY ILE SER GLU ASN LEU SEQRES 14 A 227 TYR THR SER GLY GLN PRO ASP PRO ASP LEU VAL ILE ARG SEQRES 15 A 227 THR SER GLY GLU GLN ARG LEU SER GLY PHE LEU LEU TRP SEQRES 16 A 227 GLN SER ALA TYR SER GLU MET TRP PHE THR GLU ALA HIS SEQRES 17 A 227 TRP PRO ALA PHE ARG HIS VAL ASP PHE LEU ARG ALA LEU SEQRES 18 A 227 ARG ASP TYR SER ALA ARG SEQRES 1 B 227 ASP LEU PRO ARG HIS ILE ALA VAL LEU CYS ASP GLY ASN SEQRES 2 B 227 ARG ARG TRP ALA ARG SER ALA GLY TYR ASP ASP VAL SER SEQRES 3 B 227 TYR GLY TYR ARG MET GLY ALA ALA LYS ILE ALA GLU MET SEQRES 4 B 227 LEU ARG TRP CYS HIS GLU ALA GLY ILE GLU LEU ALA THR SEQRES 5 B 227 VAL TYR LEU LEU SER THR GLU ASN LEU GLN ARG ASP PRO SEQRES 6 B 227 ASP GLU LEU ALA ALA LEU ILE GLU ILE ILE THR ASP VAL SEQRES 7 B 227 VAL GLU GLU ILE CYS ALA PRO ALA ASN HIS TRP SER VAL SEQRES 8 B 227 ARG THR VAL GLY ASP LEU GLY LEU ILE GLY GLU GLU PRO SEQRES 9 B 227 ALA ARG ARG LEU ARG GLY ALA VAL GLU SER THR PRO GLU SEQRES 10 B 227 VAL ALA SER PHE HIS VAL ASN VAL ALA VAL GLY TYR GLY SEQRES 11 B 227 GLY ARG ARG GLU ILE VAL ASP ALA VAL ARG ALA LEU LEU SEQRES 12 B 227 SER LYS GLU LEU ALA ASN GLY ALA THR ALA GLU GLU LEU SEQRES 13 B 227 VAL ASP ALA VAL THR VAL GLU GLY ILE SER GLU ASN LEU SEQRES 14 B 227 TYR THR SER GLY GLN PRO ASP PRO ASP LEU VAL ILE ARG SEQRES 15 B 227 THR SER GLY GLU GLN ARG LEU SER GLY PHE LEU LEU TRP SEQRES 16 B 227 GLN SER ALA TYR SER GLU MET TRP PHE THR GLU ALA HIS SEQRES 17 B 227 TRP PRO ALA PHE ARG HIS VAL ASP PHE LEU ARG ALA LEU SEQRES 18 B 227 ARG ASP TYR SER ALA ARG HET GPP A1257 19 HET GOL A1258 6 HET GPP B1257 19 HET GOL B1258 6 HET GOL B1259 6 HETNAM GPP GERANYL DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GPP 2(C10 H20 O7 P2) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 8 HOH *483(H2 O) HELIX 1 1 GLY A 41 ALA A 49 1 9 HELIX 2 2 VAL A 54 GLY A 76 1 23 HELIX 3 3 GLU A 88 ARG A 92 5 5 HELIX 4 4 ASP A 93 CYS A 112 1 20 HELIX 5 5 ASP A 125 ILE A 129 5 5 HELIX 6 6 GLY A 130 SER A 143 1 14 HELIX 7 7 GLY A 159 ASN A 178 1 20 HELIX 8 8 THR A 181 VAL A 189 1 9 HELIX 9 9 THR A 190 LEU A 198 1 9 HELIX 10 10 HIS A 237 PHE A 241 5 5 HELIX 11 11 ARG A 242 ARG A 256 1 15 HELIX 12 12 GLY B 41 ALA B 49 1 9 HELIX 13 13 VAL B 54 GLY B 76 1 23 HELIX 14 14 GLU B 88 ARG B 92 5 5 HELIX 15 15 ASP B 93 CYS B 112 1 20 HELIX 16 16 ALA B 113 HIS B 117 5 5 HELIX 17 17 ASP B 125 ILE B 129 5 5 HELIX 18 18 GLY B 130 SER B 143 1 14 HELIX 19 19 GLY B 159 ASN B 178 1 20 HELIX 20 20 THR B 181 ASP B 187 1 7 HELIX 21 21 THR B 190 LEU B 198 1 9 HELIX 22 22 HIS B 237 PHE B 241 5 5 HELIX 23 23 ARG B 242 ARG B 256 1 15 SHEET 1 AA 6 SER A 119 VAL A 123 0 SHEET 2 AA 6 HIS A 151 TYR A 158 1 O VAL A 152 N ARG A 121 SHEET 3 AA 6 LEU A 79 SER A 86 1 O ALA A 80 N ASN A 153 SHEET 4 AA 6 HIS A 34 LEU A 38 1 O ILE A 35 N THR A 81 SHEET 5 AA 6 LEU A 208 ARG A 211 1 O LEU A 208 N ALA A 36 SHEET 6 AA 6 GLU A 230 PHE A 233 1 O GLU A 230 N VAL A 209 SHEET 1 BA 6 SER B 119 VAL B 123 0 SHEET 2 BA 6 HIS B 151 TYR B 158 1 O VAL B 152 N ARG B 121 SHEET 3 BA 6 LEU B 79 SER B 86 1 O ALA B 80 N ASN B 153 SHEET 4 BA 6 HIS B 34 LEU B 38 1 O ILE B 35 N THR B 81 SHEET 5 BA 6 LEU B 208 ARG B 211 1 O LEU B 208 N ALA B 36 SHEET 6 BA 6 GLU B 230 PHE B 233 1 O GLU B 230 N VAL B 209 SITE 1 AC1 14 CYS A 39 ASP A 40 GLY A 41 ASN A 42 SITE 2 AC1 14 ARG A 43 ARG A 44 TYR A 58 GLY A 61 SITE 3 AC1 14 ALA A 62 ILE A 65 LEU A 84 ASN A 89 SITE 4 AC1 14 ARG A 92 HOH A2222 SITE 1 AC2 12 CYS B 39 ASP B 40 GLY B 41 ASN B 42 SITE 2 AC2 12 ARG B 43 ARG B 44 TYR B 58 GLY B 61 SITE 3 AC2 12 LEU B 84 ASN B 89 ARG B 92 HOH B2256 SITE 1 AC3 7 GLU A 163 ASP A 166 ALA A 167 ASN A 197 SITE 2 AC3 7 LEU A 198 TYR A 199 HOH A2223 SITE 1 AC4 8 GLU B 163 ASP B 166 ALA B 167 ALA B 170 SITE 2 AC4 8 ASN B 197 LEU B 198 TYR B 199 HOH B2257 SITE 1 AC5 7 ARG A 70 ARG B 242 HIS B 243 VAL B 244 SITE 2 AC5 7 HOH B2258 HOH B2259 HOH B2260 CRYST1 58.517 73.541 102.561 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017089 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013598 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009750 0.00000