data_2VGD # _entry.id 2VGD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VGD pdb_00002vgd 10.2210/pdb2vgd/pdb PDBE EBI-34397 ? ? WWPDB D_1290034397 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-25 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2024-05-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Data collection' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Derived calculations' 12 5 'Structure model' 'Refinement description' 13 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_database_status 8 4 'Structure model' pdbx_entity_branch 9 4 'Structure model' pdbx_entity_branch_descriptor 10 4 'Structure model' pdbx_entity_branch_link 11 4 'Structure model' pdbx_entity_branch_list 12 4 'Structure model' pdbx_entity_nonpoly 13 4 'Structure model' pdbx_molecule_features 14 4 'Structure model' pdbx_nonpoly_scheme 15 4 'Structure model' pdbx_struct_assembly_gen 16 4 'Structure model' pdbx_validate_close_contact 17 4 'Structure model' struct_asym 18 4 'Structure model' struct_conn 19 4 'Structure model' struct_site 20 4 'Structure model' struct_site_gen 21 5 'Structure model' chem_comp 22 5 'Structure model' chem_comp_atom 23 5 'Structure model' chem_comp_bond 24 5 'Structure model' database_2 25 5 'Structure model' pdbx_initial_refinement_model 26 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_chem_comp.name' 15 4 'Structure model' '_chem_comp.type' 16 4 'Structure model' '_pdbx_database_status.status_code_sf' 17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 4 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_1' 19 4 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1' 20 4 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_1' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 23 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 5 'Structure model' '_chem_comp.pdbx_synonyms' 36 5 'Structure model' '_database_2.pdbx_DOI' 37 5 'Structure model' '_database_2.pdbx_database_accession' 38 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VGD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-11-12 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vardakou, M.' 1 'Dumon, C.' 2 'Flint, J.E.' 3 'Murray, J.W.' 4 'Christakopoulos, P.' 5 'Weiner, D.P.' 6 'Juge, N.' 7 'Lewis, R.J.' 8 'Gilbert, H.J.' 9 # _citation.id primary _citation.title 'Understanding the Structural Basis for Substrate and Inhibitor Recognition in Eukaryotic Gh11 Xylanases.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 375 _citation.page_first 1293 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18078955 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2007.11.007 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vardakou, M.' 1 ? primary 'Dumon, C.' 2 ? primary 'Murray, J.W.' 3 ? primary 'Christakopoulos, P.' 4 ? primary 'Weiner, D.P.' 5 ? primary 'Juge, N.' 6 ? primary 'Lewis, R.J.' 7 ? primary 'Gilbert, H.J.' 8 ? primary 'Flint, J.E.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ENXYN11A 23488.682 1 3.2.1.8 ? ? 'GH11 CATALYTIC DOMAIN' 2 branched man 'beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose' 414.360 1 ? ? ? ? 3 branched man 'beta-D-xylopyranose-(1-4)-beta-D-xylopyranose' 282.245 1 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 5 non-polymer syn '5-O-[(2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyl]-alpha-L-ribofuranose' 326.299 1 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 7 water nat water 18.015 274 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 4beta-beta-xylotriose 3 4beta-beta-xylobiose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MISLKRVAALLCVAGLGMSAANAQTCLTSSQTGTNNGFYYSFWKDSPGTVNFCLQSGGRYTSNWSGINNWVGGKGWQTGS RRNITYSGSFNSPGNGYLALYGWTTNPLVEYYVVDSWGSWRPPGSDGTFLGTVNSDGGTYDIYRAQRVNAPSIIGNATFY QYWSVRQSKRVGGTITTGNHFDAWASVGLNLGTHNYQIMATEGYQSSGSSDITVSEGG ; _entity_poly.pdbx_seq_one_letter_code_can ;MISLKRVAALLCVAGLGMSAANAQTCLTSSQTGTNNGFYYSFWKDSPGTVNFCLQSGGRYTSNWSGINNWVGGKGWQTGS RRNITYSGSFNSPGNGYLALYGWTTNPLVEYYVVDSWGSWRPPGSDGTFLGTVNSDGGTYDIYRAQRVNAPSIIGNATFY QYWSVRQSKRVGGTITTGNHFDAWASVGLNLGTHNYQIMATEGYQSSGSSDITVSEGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SODIUM ION' NA 5 '5-O-[(2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyl]-alpha-L-ribofuranose' FX3 6 GLYCEROL GOL 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 SER n 1 4 LEU n 1 5 LYS n 1 6 ARG n 1 7 VAL n 1 8 ALA n 1 9 ALA n 1 10 LEU n 1 11 LEU n 1 12 CYS n 1 13 VAL n 1 14 ALA n 1 15 GLY n 1 16 LEU n 1 17 GLY n 1 18 MET n 1 19 SER n 1 20 ALA n 1 21 ALA n 1 22 ASN n 1 23 ALA n 1 24 GLN n 1 25 THR n 1 26 CYS n 1 27 LEU n 1 28 THR n 1 29 SER n 1 30 SER n 1 31 GLN n 1 32 THR n 1 33 GLY n 1 34 THR n 1 35 ASN n 1 36 ASN n 1 37 GLY n 1 38 PHE n 1 39 TYR n 1 40 TYR n 1 41 SER n 1 42 PHE n 1 43 TRP n 1 44 LYS n 1 45 ASP n 1 46 SER n 1 47 PRO n 1 48 GLY n 1 49 THR n 1 50 VAL n 1 51 ASN n 1 52 PHE n 1 53 CYS n 1 54 LEU n 1 55 GLN n 1 56 SER n 1 57 GLY n 1 58 GLY n 1 59 ARG n 1 60 TYR n 1 61 THR n 1 62 SER n 1 63 ASN n 1 64 TRP n 1 65 SER n 1 66 GLY n 1 67 ILE n 1 68 ASN n 1 69 ASN n 1 70 TRP n 1 71 VAL n 1 72 GLY n 1 73 GLY n 1 74 LYS n 1 75 GLY n 1 76 TRP n 1 77 GLN n 1 78 THR n 1 79 GLY n 1 80 SER n 1 81 ARG n 1 82 ARG n 1 83 ASN n 1 84 ILE n 1 85 THR n 1 86 TYR n 1 87 SER n 1 88 GLY n 1 89 SER n 1 90 PHE n 1 91 ASN n 1 92 SER n 1 93 PRO n 1 94 GLY n 1 95 ASN n 1 96 GLY n 1 97 TYR n 1 98 LEU n 1 99 ALA n 1 100 LEU n 1 101 TYR n 1 102 GLY n 1 103 TRP n 1 104 THR n 1 105 THR n 1 106 ASN n 1 107 PRO n 1 108 LEU n 1 109 VAL n 1 110 GLU n 1 111 TYR n 1 112 TYR n 1 113 VAL n 1 114 VAL n 1 115 ASP n 1 116 SER n 1 117 TRP n 1 118 GLY n 1 119 SER n 1 120 TRP n 1 121 ARG n 1 122 PRO n 1 123 PRO n 1 124 GLY n 1 125 SER n 1 126 ASP n 1 127 GLY n 1 128 THR n 1 129 PHE n 1 130 LEU n 1 131 GLY n 1 132 THR n 1 133 VAL n 1 134 ASN n 1 135 SER n 1 136 ASP n 1 137 GLY n 1 138 GLY n 1 139 THR n 1 140 TYR n 1 141 ASP n 1 142 ILE n 1 143 TYR n 1 144 ARG n 1 145 ALA n 1 146 GLN n 1 147 ARG n 1 148 VAL n 1 149 ASN n 1 150 ALA n 1 151 PRO n 1 152 SER n 1 153 ILE n 1 154 ILE n 1 155 GLY n 1 156 ASN n 1 157 ALA n 1 158 THR n 1 159 PHE n 1 160 TYR n 1 161 GLN n 1 162 TYR n 1 163 TRP n 1 164 SER n 1 165 VAL n 1 166 ARG n 1 167 GLN n 1 168 SER n 1 169 LYS n 1 170 ARG n 1 171 VAL n 1 172 GLY n 1 173 GLY n 1 174 THR n 1 175 ILE n 1 176 THR n 1 177 THR n 1 178 GLY n 1 179 ASN n 1 180 HIS n 1 181 PHE n 1 182 ASP n 1 183 ALA n 1 184 TRP n 1 185 ALA n 1 186 SER n 1 187 VAL n 1 188 GLY n 1 189 LEU n 1 190 ASN n 1 191 LEU n 1 192 GLY n 1 193 THR n 1 194 HIS n 1 195 ASN n 1 196 TYR n 1 197 GLN n 1 198 ILE n 1 199 MET n 1 200 ALA n 1 201 THR n 1 202 GLU n 1 203 GLY n 1 204 TYR n 1 205 GLN n 1 206 SER n 1 207 SER n 1 208 GLY n 1 209 SER n 1 210 SER n 1 211 ASP n 1 212 ILE n 1 213 THR n 1 214 VAL n 1 215 SER n 1 216 GLU n 1 217 GLY n 1 218 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PSE420-CHIS _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DXylpb1-4DXylpb1-4DXylpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,3,2/[a212h-1b_1-5]/1-1-1/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Xylp]{[(4+1)][b-D-Xylp]{[(4+1)][b-D-Xylp]{}}}' LINUCS PDB-CARE ? 4 3 DXylpb1-4DXylpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/1,2,1/[a212h-1b_1-5]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 3 '[][b-D-Xylp]{[(4+1)][b-D-Xylp]{}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 XYP C1 O1 1 XYP O4 HO4 sing ? 2 2 3 XYP C1 O1 2 XYP O4 HO4 sing ? 3 3 2 XYP C1 O1 1 XYP O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FX3 non-polymer . '5-O-[(2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyl]-alpha-L-ribofuranose' ? 'C15 H18 O8' 326.299 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYP 'D-saccharide, beta linking' . beta-D-xylopyranose 'beta-D-xylose; D-xylose; xylose' 'C5 H10 O5' 150.130 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XYP 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DXylpb XYP 'COMMON NAME' GMML 1.0 b-D-xylopyranose XYP 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Xylp XYP 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Xyl # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -20 ? ? ? A . n A 1 2 ILE 2 -19 ? ? ? A . n A 1 3 SER 3 -18 ? ? ? A . n A 1 4 LEU 4 -17 ? ? ? A . n A 1 5 LYS 5 -16 ? ? ? A . n A 1 6 ARG 6 -15 ? ? ? A . n A 1 7 VAL 7 -14 ? ? ? A . n A 1 8 ALA 8 -13 ? ? ? A . n A 1 9 ALA 9 -12 ? ? ? A . n A 1 10 LEU 10 -11 ? ? ? A . n A 1 11 LEU 11 -10 ? ? ? A . n A 1 12 CYS 12 -9 ? ? ? A . n A 1 13 VAL 13 -8 ? ? ? A . n A 1 14 ALA 14 -7 ? ? ? A . n A 1 15 GLY 15 -6 ? ? ? A . n A 1 16 LEU 16 -5 ? ? ? A . n A 1 17 GLY 17 -4 ? ? ? A . n A 1 18 MET 18 -3 ? ? ? A . n A 1 19 SER 19 -2 ? ? ? A . n A 1 20 ALA 20 -1 ? ? ? A . n A 1 21 ALA 21 0 ? ? ? A . n A 1 22 ASN 22 1 ? ? ? A . n A 1 23 ALA 23 2 2 ALA ALA A . n A 1 24 GLN 24 3 3 GLN GLN A . n A 1 25 THR 25 4 4 THR THR A . n A 1 26 CYS 26 5 5 CYS CYS A . n A 1 27 LEU 27 6 6 LEU LEU A . n A 1 28 THR 28 7 7 THR THR A . n A 1 29 SER 29 8 8 SER SER A . n A 1 30 SER 30 9 9 SER SER A . n A 1 31 GLN 31 10 10 GLN GLN A . n A 1 32 THR 32 11 11 THR THR A . n A 1 33 GLY 33 12 12 GLY GLY A . n A 1 34 THR 34 13 13 THR THR A . n A 1 35 ASN 35 14 14 ASN ASN A . n A 1 36 ASN 36 15 15 ASN ASN A . n A 1 37 GLY 37 16 16 GLY GLY A . n A 1 38 PHE 38 17 17 PHE PHE A . n A 1 39 TYR 39 18 18 TYR TYR A . n A 1 40 TYR 40 19 19 TYR TYR A . n A 1 41 SER 41 20 20 SER SER A . n A 1 42 PHE 42 21 21 PHE PHE A . n A 1 43 TRP 43 22 22 TRP TRP A . n A 1 44 LYS 44 23 23 LYS LYS A . n A 1 45 ASP 45 24 24 ASP ASP A . n A 1 46 SER 46 25 25 SER SER A . n A 1 47 PRO 47 26 26 PRO PRO A . n A 1 48 GLY 48 27 27 GLY GLY A . n A 1 49 THR 49 28 28 THR THR A . n A 1 50 VAL 50 29 29 VAL VAL A . n A 1 51 ASN 51 30 30 ASN ASN A . n A 1 52 PHE 52 31 31 PHE PHE A . n A 1 53 CYS 53 32 32 CYS CYS A . n A 1 54 LEU 54 33 33 LEU LEU A . n A 1 55 GLN 55 34 34 GLN GLN A . n A 1 56 SER 56 35 35 SER SER A . n A 1 57 GLY 57 36 36 GLY GLY A . n A 1 58 GLY 58 37 37 GLY GLY A . n A 1 59 ARG 59 38 38 ARG ARG A . n A 1 60 TYR 60 39 39 TYR TYR A . n A 1 61 THR 61 40 40 THR THR A . n A 1 62 SER 62 41 41 SER SER A . n A 1 63 ASN 63 42 42 ASN ASN A . n A 1 64 TRP 64 43 43 TRP TRP A . n A 1 65 SER 65 44 44 SER SER A . n A 1 66 GLY 66 45 45 GLY GLY A . n A 1 67 ILE 67 46 46 ILE ILE A . n A 1 68 ASN 68 47 47 ASN ASN A . n A 1 69 ASN 69 48 48 ASN ASN A . n A 1 70 TRP 70 49 49 TRP TRP A . n A 1 71 VAL 71 50 50 VAL VAL A . n A 1 72 GLY 72 51 51 GLY GLY A . n A 1 73 GLY 73 52 52 GLY GLY A . n A 1 74 LYS 74 53 53 LYS LYS A . n A 1 75 GLY 75 54 54 GLY GLY A . n A 1 76 TRP 76 55 55 TRP TRP A . n A 1 77 GLN 77 56 56 GLN GLN A . n A 1 78 THR 78 57 57 THR THR A . n A 1 79 GLY 79 58 58 GLY GLY A . n A 1 80 SER 80 59 59 SER SER A . n A 1 81 ARG 81 60 60 ARG ARG A . n A 1 82 ARG 82 61 61 ARG ARG A . n A 1 83 ASN 83 62 62 ASN ASN A . n A 1 84 ILE 84 63 63 ILE ILE A . n A 1 85 THR 85 64 64 THR THR A . n A 1 86 TYR 86 65 65 TYR TYR A . n A 1 87 SER 87 66 66 SER SER A . n A 1 88 GLY 88 67 67 GLY GLY A . n A 1 89 SER 89 68 68 SER SER A . n A 1 90 PHE 90 69 69 PHE PHE A . n A 1 91 ASN 91 70 70 ASN ASN A . n A 1 92 SER 92 71 71 SER SER A . n A 1 93 PRO 93 72 72 PRO PRO A . n A 1 94 GLY 94 73 73 GLY GLY A . n A 1 95 ASN 95 74 74 ASN ASN A . n A 1 96 GLY 96 75 75 GLY GLY A . n A 1 97 TYR 97 76 76 TYR TYR A . n A 1 98 LEU 98 77 77 LEU LEU A . n A 1 99 ALA 99 78 78 ALA ALA A . n A 1 100 LEU 100 79 79 LEU LEU A . n A 1 101 TYR 101 80 80 TYR TYR A . n A 1 102 GLY 102 81 81 GLY GLY A . n A 1 103 TRP 103 82 82 TRP TRP A . n A 1 104 THR 104 83 83 THR THR A . n A 1 105 THR 105 84 84 THR THR A . n A 1 106 ASN 106 85 85 ASN ASN A . n A 1 107 PRO 107 86 86 PRO PRO A . n A 1 108 LEU 108 87 87 LEU LEU A . n A 1 109 VAL 109 88 88 VAL VAL A . n A 1 110 GLU 110 89 89 GLU GLU A . n A 1 111 TYR 111 90 90 TYR TYR A . n A 1 112 TYR 112 91 91 TYR TYR A . n A 1 113 VAL 113 92 92 VAL VAL A . n A 1 114 VAL 114 93 93 VAL VAL A . n A 1 115 ASP 115 94 94 ASP ASP A . n A 1 116 SER 116 95 95 SER SER A . n A 1 117 TRP 117 96 96 TRP TRP A . n A 1 118 GLY 118 97 97 GLY GLY A . n A 1 119 SER 119 98 98 SER SER A . n A 1 120 TRP 120 99 99 TRP TRP A . n A 1 121 ARG 121 100 100 ARG ARG A . n A 1 122 PRO 122 101 101 PRO PRO A . n A 1 123 PRO 123 102 102 PRO PRO A . n A 1 124 GLY 124 103 103 GLY GLY A . n A 1 125 SER 125 104 104 SER SER A . n A 1 126 ASP 126 105 105 ASP ASP A . n A 1 127 GLY 127 106 106 GLY GLY A . n A 1 128 THR 128 107 107 THR THR A . n A 1 129 PHE 129 108 108 PHE PHE A . n A 1 130 LEU 130 109 109 LEU LEU A . n A 1 131 GLY 131 110 110 GLY GLY A . n A 1 132 THR 132 111 111 THR THR A . n A 1 133 VAL 133 112 112 VAL VAL A . n A 1 134 ASN 134 113 113 ASN ASN A . n A 1 135 SER 135 114 114 SER SER A . n A 1 136 ASP 136 115 115 ASP ASP A . n A 1 137 GLY 137 116 116 GLY GLY A . n A 1 138 GLY 138 117 117 GLY GLY A . n A 1 139 THR 139 118 118 THR THR A . n A 1 140 TYR 140 119 119 TYR TYR A . n A 1 141 ASP 141 120 120 ASP ASP A . n A 1 142 ILE 142 121 121 ILE ILE A . n A 1 143 TYR 143 122 122 TYR TYR A . n A 1 144 ARG 144 123 123 ARG ARG A . n A 1 145 ALA 145 124 124 ALA ALA A . n A 1 146 GLN 146 125 125 GLN GLN A . n A 1 147 ARG 147 126 126 ARG ARG A . n A 1 148 VAL 148 127 127 VAL VAL A . n A 1 149 ASN 149 128 128 ASN ASN A . n A 1 150 ALA 150 129 129 ALA ALA A . n A 1 151 PRO 151 130 130 PRO PRO A . n A 1 152 SER 152 131 131 SER SER A . n A 1 153 ILE 153 132 132 ILE ILE A . n A 1 154 ILE 154 133 133 ILE ILE A . n A 1 155 GLY 155 134 134 GLY GLY A . n A 1 156 ASN 156 135 135 ASN ASN A . n A 1 157 ALA 157 136 136 ALA ALA A . n A 1 158 THR 158 137 137 THR THR A . n A 1 159 PHE 159 138 138 PHE PHE A . n A 1 160 TYR 160 139 139 TYR TYR A . n A 1 161 GLN 161 140 140 GLN GLN A . n A 1 162 TYR 162 141 141 TYR TYR A . n A 1 163 TRP 163 142 142 TRP TRP A . n A 1 164 SER 164 143 143 SER SER A . n A 1 165 VAL 165 144 144 VAL VAL A . n A 1 166 ARG 166 145 145 ARG ARG A . n A 1 167 GLN 167 146 146 GLN GLN A . n A 1 168 SER 168 147 147 SER SER A . n A 1 169 LYS 169 148 148 LYS LYS A . n A 1 170 ARG 170 149 149 ARG ARG A . n A 1 171 VAL 171 150 150 VAL VAL A . n A 1 172 GLY 172 151 151 GLY GLY A . n A 1 173 GLY 173 152 152 GLY GLY A . n A 1 174 THR 174 153 153 THR THR A . n A 1 175 ILE 175 154 154 ILE ILE A . n A 1 176 THR 176 155 155 THR THR A . n A 1 177 THR 177 156 156 THR THR A . n A 1 178 GLY 178 157 157 GLY GLY A . n A 1 179 ASN 179 158 158 ASN ASN A . n A 1 180 HIS 180 159 159 HIS HIS A . n A 1 181 PHE 181 160 160 PHE PHE A . n A 1 182 ASP 182 161 161 ASP ASP A . n A 1 183 ALA 183 162 162 ALA ALA A . n A 1 184 TRP 184 163 163 TRP TRP A . n A 1 185 ALA 185 164 164 ALA ALA A . n A 1 186 SER 186 165 165 SER SER A . n A 1 187 VAL 187 166 166 VAL VAL A . n A 1 188 GLY 188 167 167 GLY GLY A . n A 1 189 LEU 189 168 168 LEU LEU A . n A 1 190 ASN 190 169 169 ASN ASN A . n A 1 191 LEU 191 170 170 LEU LEU A . n A 1 192 GLY 192 171 171 GLY GLY A . n A 1 193 THR 193 172 172 THR THR A . n A 1 194 HIS 194 173 173 HIS HIS A . n A 1 195 ASN 195 174 174 ASN ASN A . n A 1 196 TYR 196 175 175 TYR TYR A . n A 1 197 GLN 197 176 176 GLN GLN A . n A 1 198 ILE 198 177 177 ILE ILE A . n A 1 199 MET 199 178 178 MET MET A . n A 1 200 ALA 200 179 179 ALA ALA A . n A 1 201 THR 201 180 180 THR THR A . n A 1 202 GLU 202 181 181 GLU GLU A . n A 1 203 GLY 203 182 182 GLY GLY A . n A 1 204 TYR 204 183 183 TYR TYR A . n A 1 205 GLN 205 184 184 GLN GLN A . n A 1 206 SER 206 185 185 SER SER A . n A 1 207 SER 207 186 186 SER SER A . n A 1 208 GLY 208 187 187 GLY GLY A . n A 1 209 SER 209 188 188 SER SER A . n A 1 210 SER 210 189 189 SER SER A . n A 1 211 ASP 211 190 190 ASP ASP A . n A 1 212 ILE 212 191 191 ILE ILE A . n A 1 213 THR 213 192 192 THR THR A . n A 1 214 VAL 214 193 193 VAL VAL A . n A 1 215 SER 215 194 194 SER SER A . n A 1 216 GLU 216 195 195 GLU GLU A . n A 1 217 GLY 217 196 196 GLY GLY A . n A 1 218 GLY 218 197 ? ? ? A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 XYP 1 B XYP 1 A XYP 1198 n B 2 XYP 2 B XYP 2 A XYP 1199 n B 2 XYP 3 B XYP 3 A XYP 1197 n C 3 XYP 1 C XYP 1 A XYP 1205 n C 3 XYP 2 C XYP 2 A XYP 1206 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA 1 1196 1196 NA NA A . E 5 FX3 1 1200 1200 FX3 FX3 A . F 6 GOL 1 1201 1201 GOL GOL A . G 6 GOL 1 1202 1202 GOL GOL A . H 6 GOL 1 1203 1203 GOL GOL A . I 6 GOL 1 1204 1204 GOL GOL A . J 7 HOH 1 2001 2001 HOH HOH A . J 7 HOH 2 2002 2002 HOH HOH A . J 7 HOH 3 2003 2003 HOH HOH A . J 7 HOH 4 2004 2004 HOH HOH A . J 7 HOH 5 2005 2005 HOH HOH A . J 7 HOH 6 2006 2006 HOH HOH A . J 7 HOH 7 2007 2007 HOH HOH A . J 7 HOH 8 2008 2008 HOH HOH A . J 7 HOH 9 2009 2009 HOH HOH A . J 7 HOH 10 2010 2010 HOH HOH A . J 7 HOH 11 2011 2011 HOH HOH A . J 7 HOH 12 2012 2012 HOH HOH A . J 7 HOH 13 2013 2013 HOH HOH A . J 7 HOH 14 2014 2014 HOH HOH A . J 7 HOH 15 2015 2015 HOH HOH A . J 7 HOH 16 2016 2016 HOH HOH A . J 7 HOH 17 2017 2017 HOH HOH A . J 7 HOH 18 2018 2018 HOH HOH A . J 7 HOH 19 2019 2019 HOH HOH A . J 7 HOH 20 2020 2020 HOH HOH A . J 7 HOH 21 2021 2021 HOH HOH A . J 7 HOH 22 2022 2022 HOH HOH A . J 7 HOH 23 2023 2023 HOH HOH A . J 7 HOH 24 2024 2024 HOH HOH A . J 7 HOH 25 2025 2025 HOH HOH A . J 7 HOH 26 2026 2026 HOH HOH A . J 7 HOH 27 2027 2027 HOH HOH A . J 7 HOH 28 2028 2028 HOH HOH A . J 7 HOH 29 2029 2029 HOH HOH A . J 7 HOH 30 2030 2030 HOH HOH A . J 7 HOH 31 2031 2031 HOH HOH A . J 7 HOH 32 2032 2032 HOH HOH A . J 7 HOH 33 2033 2033 HOH HOH A . J 7 HOH 34 2034 2034 HOH HOH A . J 7 HOH 35 2035 2035 HOH HOH A . J 7 HOH 36 2036 2036 HOH HOH A . J 7 HOH 37 2037 2037 HOH HOH A . J 7 HOH 38 2038 2038 HOH HOH A . J 7 HOH 39 2039 2039 HOH HOH A . J 7 HOH 40 2040 2040 HOH HOH A . J 7 HOH 41 2041 2041 HOH HOH A . J 7 HOH 42 2042 2042 HOH HOH A . J 7 HOH 43 2043 2043 HOH HOH A . J 7 HOH 44 2044 2044 HOH HOH A . J 7 HOH 45 2045 2045 HOH HOH A . J 7 HOH 46 2046 2046 HOH HOH A . J 7 HOH 47 2047 2047 HOH HOH A . J 7 HOH 48 2048 2048 HOH HOH A . J 7 HOH 49 2049 2049 HOH HOH A . J 7 HOH 50 2050 2050 HOH HOH A . J 7 HOH 51 2051 2051 HOH HOH A . J 7 HOH 52 2052 2052 HOH HOH A . J 7 HOH 53 2053 2053 HOH HOH A . J 7 HOH 54 2054 2054 HOH HOH A . J 7 HOH 55 2055 2055 HOH HOH A . J 7 HOH 56 2056 2056 HOH HOH A . J 7 HOH 57 2057 2057 HOH HOH A . J 7 HOH 58 2058 2058 HOH HOH A . J 7 HOH 59 2059 2059 HOH HOH A . J 7 HOH 60 2060 2060 HOH HOH A . J 7 HOH 61 2061 2061 HOH HOH A . J 7 HOH 62 2062 2062 HOH HOH A . J 7 HOH 63 2063 2063 HOH HOH A . J 7 HOH 64 2064 2064 HOH HOH A . J 7 HOH 65 2065 2065 HOH HOH A . J 7 HOH 66 2066 2066 HOH HOH A . J 7 HOH 67 2067 2067 HOH HOH A . J 7 HOH 68 2068 2068 HOH HOH A . J 7 HOH 69 2069 2069 HOH HOH A . J 7 HOH 70 2070 2070 HOH HOH A . J 7 HOH 71 2071 2071 HOH HOH A . J 7 HOH 72 2072 2072 HOH HOH A . J 7 HOH 73 2073 2073 HOH HOH A . J 7 HOH 74 2074 2074 HOH HOH A . J 7 HOH 75 2075 2075 HOH HOH A . J 7 HOH 76 2076 2076 HOH HOH A . J 7 HOH 77 2077 2077 HOH HOH A . J 7 HOH 78 2078 2078 HOH HOH A . J 7 HOH 79 2079 2079 HOH HOH A . J 7 HOH 80 2080 2080 HOH HOH A . J 7 HOH 81 2081 2081 HOH HOH A . J 7 HOH 82 2082 2082 HOH HOH A . J 7 HOH 83 2083 2083 HOH HOH A . J 7 HOH 84 2084 2084 HOH HOH A . J 7 HOH 85 2085 2085 HOH HOH A . J 7 HOH 86 2086 2086 HOH HOH A . J 7 HOH 87 2087 2087 HOH HOH A . J 7 HOH 88 2088 2088 HOH HOH A . J 7 HOH 89 2089 2089 HOH HOH A . J 7 HOH 90 2090 2090 HOH HOH A . J 7 HOH 91 2091 2091 HOH HOH A . J 7 HOH 92 2092 2092 HOH HOH A . J 7 HOH 93 2093 2093 HOH HOH A . J 7 HOH 94 2094 2094 HOH HOH A . J 7 HOH 95 2095 2095 HOH HOH A . J 7 HOH 96 2096 2096 HOH HOH A . J 7 HOH 97 2097 2097 HOH HOH A . J 7 HOH 98 2098 2098 HOH HOH A . J 7 HOH 99 2099 2099 HOH HOH A . J 7 HOH 100 2100 2100 HOH HOH A . J 7 HOH 101 2101 2101 HOH HOH A . J 7 HOH 102 2102 2102 HOH HOH A . J 7 HOH 103 2103 2103 HOH HOH A . J 7 HOH 104 2104 2104 HOH HOH A . J 7 HOH 105 2105 2105 HOH HOH A . J 7 HOH 106 2106 2106 HOH HOH A . J 7 HOH 107 2107 2107 HOH HOH A . J 7 HOH 108 2108 2108 HOH HOH A . J 7 HOH 109 2109 2109 HOH HOH A . J 7 HOH 110 2110 2110 HOH HOH A . J 7 HOH 111 2111 2111 HOH HOH A . J 7 HOH 112 2112 2112 HOH HOH A . J 7 HOH 113 2113 2113 HOH HOH A . J 7 HOH 114 2114 2114 HOH HOH A . J 7 HOH 115 2115 2115 HOH HOH A . J 7 HOH 116 2116 2116 HOH HOH A . J 7 HOH 117 2117 2117 HOH HOH A . J 7 HOH 118 2118 2118 HOH HOH A . J 7 HOH 119 2119 2119 HOH HOH A . J 7 HOH 120 2120 2120 HOH HOH A . J 7 HOH 121 2121 2121 HOH HOH A . J 7 HOH 122 2122 2122 HOH HOH A . J 7 HOH 123 2123 2123 HOH HOH A . J 7 HOH 124 2124 2124 HOH HOH A . J 7 HOH 125 2125 2125 HOH HOH A . J 7 HOH 126 2126 2126 HOH HOH A . J 7 HOH 127 2127 2127 HOH HOH A . J 7 HOH 128 2128 2128 HOH HOH A . J 7 HOH 129 2129 2129 HOH HOH A . J 7 HOH 130 2130 2130 HOH HOH A . J 7 HOH 131 2131 2131 HOH HOH A . J 7 HOH 132 2132 2132 HOH HOH A . J 7 HOH 133 2133 2133 HOH HOH A . J 7 HOH 134 2134 2134 HOH HOH A . J 7 HOH 135 2135 2135 HOH HOH A . J 7 HOH 136 2136 2136 HOH HOH A . J 7 HOH 137 2137 2137 HOH HOH A . J 7 HOH 138 2138 2138 HOH HOH A . J 7 HOH 139 2139 2139 HOH HOH A . J 7 HOH 140 2140 2140 HOH HOH A . J 7 HOH 141 2141 2141 HOH HOH A . J 7 HOH 142 2142 2142 HOH HOH A . J 7 HOH 143 2143 2143 HOH HOH A . J 7 HOH 144 2144 2144 HOH HOH A . J 7 HOH 145 2145 2145 HOH HOH A . J 7 HOH 146 2146 2146 HOH HOH A . J 7 HOH 147 2147 2147 HOH HOH A . J 7 HOH 148 2148 2148 HOH HOH A . J 7 HOH 149 2149 2149 HOH HOH A . J 7 HOH 150 2150 2150 HOH HOH A . J 7 HOH 151 2151 2151 HOH HOH A . J 7 HOH 152 2152 2152 HOH HOH A . J 7 HOH 153 2153 2153 HOH HOH A . J 7 HOH 154 2154 2154 HOH HOH A . J 7 HOH 155 2155 2155 HOH HOH A . J 7 HOH 156 2156 2156 HOH HOH A . J 7 HOH 157 2157 2157 HOH HOH A . J 7 HOH 158 2158 2158 HOH HOH A . J 7 HOH 159 2159 2159 HOH HOH A . J 7 HOH 160 2160 2160 HOH HOH A . J 7 HOH 161 2161 2161 HOH HOH A . J 7 HOH 162 2162 2162 HOH HOH A . J 7 HOH 163 2163 2163 HOH HOH A . J 7 HOH 164 2164 2164 HOH HOH A . J 7 HOH 165 2165 2165 HOH HOH A . J 7 HOH 166 2166 2166 HOH HOH A . J 7 HOH 167 2167 2167 HOH HOH A . J 7 HOH 168 2168 2168 HOH HOH A . J 7 HOH 169 2169 2169 HOH HOH A . J 7 HOH 170 2170 2170 HOH HOH A . J 7 HOH 171 2171 2171 HOH HOH A . J 7 HOH 172 2172 2172 HOH HOH A . J 7 HOH 173 2173 2173 HOH HOH A . J 7 HOH 174 2174 2174 HOH HOH A . J 7 HOH 175 2175 2175 HOH HOH A . J 7 HOH 176 2176 2176 HOH HOH A . J 7 HOH 177 2177 2177 HOH HOH A . J 7 HOH 178 2178 2178 HOH HOH A . J 7 HOH 179 2179 2179 HOH HOH A . J 7 HOH 180 2180 2180 HOH HOH A . J 7 HOH 181 2181 2181 HOH HOH A . J 7 HOH 182 2182 2182 HOH HOH A . J 7 HOH 183 2183 2183 HOH HOH A . J 7 HOH 184 2184 2184 HOH HOH A . J 7 HOH 185 2185 2185 HOH HOH A . J 7 HOH 186 2186 2186 HOH HOH A . J 7 HOH 187 2187 2187 HOH HOH A . J 7 HOH 188 2188 2188 HOH HOH A . J 7 HOH 189 2189 2189 HOH HOH A . J 7 HOH 190 2190 2190 HOH HOH A . J 7 HOH 191 2191 2191 HOH HOH A . J 7 HOH 192 2192 2192 HOH HOH A . J 7 HOH 193 2193 2193 HOH HOH A . J 7 HOH 194 2194 2194 HOH HOH A . J 7 HOH 195 2195 2195 HOH HOH A . J 7 HOH 196 2196 2196 HOH HOH A . J 7 HOH 197 2197 2197 HOH HOH A . J 7 HOH 198 2198 2198 HOH HOH A . J 7 HOH 199 2199 2199 HOH HOH A . J 7 HOH 200 2200 2200 HOH HOH A . J 7 HOH 201 2201 2201 HOH HOH A . J 7 HOH 202 2202 2202 HOH HOH A . J 7 HOH 203 2203 2203 HOH HOH A . J 7 HOH 204 2204 2204 HOH HOH A . J 7 HOH 205 2205 2205 HOH HOH A . J 7 HOH 206 2206 2206 HOH HOH A . J 7 HOH 207 2207 2207 HOH HOH A . J 7 HOH 208 2208 2208 HOH HOH A . J 7 HOH 209 2209 2209 HOH HOH A . J 7 HOH 210 2210 2210 HOH HOH A . J 7 HOH 211 2211 2211 HOH HOH A . J 7 HOH 212 2212 2212 HOH HOH A . J 7 HOH 213 2213 2213 HOH HOH A . J 7 HOH 214 2214 2214 HOH HOH A . J 7 HOH 215 2215 2215 HOH HOH A . J 7 HOH 216 2216 2216 HOH HOH A . J 7 HOH 217 2217 2217 HOH HOH A . J 7 HOH 218 2218 2218 HOH HOH A . J 7 HOH 219 2219 2219 HOH HOH A . J 7 HOH 220 2220 2220 HOH HOH A . J 7 HOH 221 2221 2221 HOH HOH A . J 7 HOH 222 2222 2222 HOH HOH A . J 7 HOH 223 2223 2223 HOH HOH A . J 7 HOH 224 2224 2224 HOH HOH A . J 7 HOH 225 2225 2225 HOH HOH A . J 7 HOH 226 2226 2226 HOH HOH A . J 7 HOH 227 2227 2227 HOH HOH A . J 7 HOH 228 2228 2228 HOH HOH A . J 7 HOH 229 2229 2229 HOH HOH A . J 7 HOH 230 2230 2230 HOH HOH A . J 7 HOH 231 2231 2231 HOH HOH A . J 7 HOH 232 2232 2232 HOH HOH A . J 7 HOH 233 2233 2233 HOH HOH A . J 7 HOH 234 2234 2234 HOH HOH A . J 7 HOH 235 2235 2235 HOH HOH A . J 7 HOH 236 2236 2236 HOH HOH A . J 7 HOH 237 2237 2237 HOH HOH A . J 7 HOH 238 2238 2238 HOH HOH A . J 7 HOH 239 2239 2239 HOH HOH A . J 7 HOH 240 2240 2240 HOH HOH A . J 7 HOH 241 2241 2241 HOH HOH A . J 7 HOH 242 2242 2242 HOH HOH A . J 7 HOH 243 2243 2243 HOH HOH A . J 7 HOH 244 2244 2244 HOH HOH A . J 7 HOH 245 2245 2245 HOH HOH A . J 7 HOH 246 2246 2246 HOH HOH A . J 7 HOH 247 2247 2247 HOH HOH A . J 7 HOH 248 2248 2248 HOH HOH A . J 7 HOH 249 2249 2249 HOH HOH A . J 7 HOH 250 2250 2250 HOH HOH A . J 7 HOH 251 2251 2251 HOH HOH A . J 7 HOH 252 2252 2252 HOH HOH A . J 7 HOH 253 2253 2253 HOH HOH A . J 7 HOH 254 2254 2254 HOH HOH A . J 7 HOH 255 2255 2255 HOH HOH A . J 7 HOH 256 2256 2256 HOH HOH A . J 7 HOH 257 2257 2257 HOH HOH A . J 7 HOH 258 2258 2258 HOH HOH A . J 7 HOH 259 2259 2259 HOH HOH A . J 7 HOH 260 2260 2260 HOH HOH A . J 7 HOH 261 2261 2261 HOH HOH A . J 7 HOH 262 2262 2262 HOH HOH A . J 7 HOH 263 2263 2263 HOH HOH A . J 7 HOH 264 2264 2264 HOH HOH A . J 7 HOH 265 2265 2265 HOH HOH A . J 7 HOH 266 2266 2266 HOH HOH A . J 7 HOH 267 2267 2267 HOH HOH A . J 7 HOH 268 2268 2268 HOH HOH A . J 7 HOH 269 2269 2269 HOH HOH A . J 7 HOH 270 2270 2270 HOH HOH A . J 7 HOH 271 2272 2272 HOH HOH A . J 7 HOH 272 2273 2273 HOH HOH A . J 7 HOH 273 2274 2274 HOH HOH A . J 7 HOH 274 2275 2275 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # _cell.entry_id 2VGD _cell.length_a 76.470 _cell.length_b 76.470 _cell.length_c 102.600 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VGD _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # _exptl.entry_id 2VGD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.2 _exptl_crystal.density_percent_sol 62 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '3.75 MM FAX3 0.2 M AMMONIUM FORMATE, PH 6.6 AND 17% (W/V) POLYETHYLENE GLYCOL 3350' # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU IMAGE PLATE' _diffrn_detector.pdbx_collection_date 2005-04-01 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VGD _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 31.00 _reflns.d_resolution_high 1.80 _reflns.number_obs 27316 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.80 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.79 _reflns_shell.d_res_low 1.89 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.75 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.00 _reflns_shell.pdbx_redundancy 6.8 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VGD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27316 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.66 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.177 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.175 _refine.ls_R_factor_R_free 0.203 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1460 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.B_iso_mean 18.89 _refine.aniso_B[1][1] 0.01000 _refine.aniso_B[2][2] 0.01000 _refine.aniso_B[3][3] -0.02000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'APO FORM OF ENXYN11A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.099 _refine.pdbx_overall_ESU_R_Free 0.098 _refine.overall_SU_ML 0.064 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.046 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1505 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 94 _refine_hist.number_atoms_solvent 274 _refine_hist.number_atoms_total 1873 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 30.66 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.021 ? 1656 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.431 1.950 ? 2256 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.630 5.000 ? 194 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.377 23.684 ? 76 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.227 15.000 ? 213 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.762 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.100 0.200 ? 238 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1264 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.202 0.200 ? 773 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.301 0.200 ? 1082 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.132 0.200 ? 207 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.277 0.200 ? 43 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.125 0.200 ? 22 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.662 1.500 ? 951 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.161 2.000 ? 1527 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.902 3.000 ? 766 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.845 4.500 ? 729 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.85 _refine_ls_shell.number_reflns_R_work 1944 _refine_ls_shell.R_factor_R_work 0.3320 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.4200 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 118 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2VGD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2VGD _struct.title 'Crystal structure of environmental isolated GH11 in complex with xylobiose and feruloyl-arabino-xylotriose' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VGD _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'GLYCOSIDE HYDROLASE, XYLANASE, BETA JELLY ROLL, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 7 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2VGD _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession 2VGD _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2VGD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 218 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2VGD _struct_ref_seq.db_align_beg -20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 197 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -20 _struct_ref_seq.pdbx_auth_seq_align_end 197 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 123 ? GLY A 127 ? PRO A 102 GLY A 106 5 ? 5 HELX_P HELX_P2 2 THR A 177 ? VAL A 187 ? THR A 156 VAL A 166 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 5 A CYS 32 1_555 ? ? ? ? ? ? ? 2.041 ? ? covale1 covale both ? E FX3 . "C1'" ? ? ? 1_555 B XYP . O3 ? ? A FX3 1200 B XYP 2 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale2 covale both ? B XYP . O4 ? ? ? 1_555 B XYP . C1 ? ? B XYP 1 B XYP 2 1_555 ? ? ? ? ? ? ? 1.445 ? ? covale3 covale both ? B XYP . O4 ? ? ? 1_555 B XYP . C1 ? ? B XYP 2 B XYP 3 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale4 covale both ? C XYP . O4 ? ? ? 1_555 C XYP . C1 ? ? C XYP 1 C XYP 2 1_555 ? ? ? ? ? ? ? 1.446 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 106 A . ? ASN 85 A PRO 107 A ? PRO 86 A 1 4.74 2 PRO 122 A . ? PRO 101 A PRO 123 A ? PRO 102 A 1 -3.60 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AB 6 7 ? parallel AB 7 8 ? anti-parallel AB 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 25 ? LEU A 27 ? THR A 4 LEU A 6 AA 2 THR A 49 ? LEU A 54 ? THR A 28 LEU A 33 AA 3 ARG A 59 ? SER A 65 ? ARG A 38 SER A 44 AA 4 GLY A 208 ? GLU A 216 ? GLY A 187 GLU A 195 AA 5 ASN A 83 ? ASN A 91 ? ASN A 62 ASN A 70 AA 6 GLY A 173 ? THR A 176 ? GLY A 152 THR A 155 AB 1 GLN A 31 ? ASN A 35 ? GLN A 10 ASN A 14 AB 2 PHE A 38 ? LYS A 44 ? PHE A 17 LYS A 23 AB 3 ASN A 69 ? TRP A 76 ? ASN A 48 TRP A 55 AB 4 THR A 193 ? TYR A 204 ? THR A 172 TYR A 183 AB 5 GLY A 96 ? THR A 105 ? GLY A 75 THR A 84 AB 6 VAL A 109 ? TRP A 117 ? VAL A 88 TRP A 96 AB 7 ALA A 157 ? ARG A 166 ? ALA A 136 ARG A 145 AB 8 GLY A 138 ? ALA A 150 ? GLY A 117 ALA A 129 AB 9 THR A 128 ? SER A 135 ? THR A 107 SER A 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 27 ? N LEU A 6 O PHE A 52 ? O PHE A 31 AA 2 3 N CYS A 53 ? N CYS A 32 O THR A 61 ? O THR A 40 AA 3 4 N TRP A 64 ? N TRP A 43 O GLY A 208 ? O GLY A 187 AA 4 5 N SER A 215 ? N SER A 194 O THR A 85 ? O THR A 64 AA 5 6 N TYR A 86 ? N TYR A 65 O GLY A 173 ? O GLY A 152 AB 1 2 N ASN A 35 ? N ASN A 14 O PHE A 38 ? O PHE A 17 AB 2 3 N TRP A 43 ? N TRP A 22 O VAL A 71 ? O VAL A 50 AB 3 4 N TRP A 76 ? N TRP A 55 O GLN A 197 ? O GLN A 176 AB 4 5 N GLU A 202 ? N GLU A 181 O TYR A 97 ? O TYR A 76 AB 5 6 N THR A 104 ? N THR A 83 O VAL A 109 ? O VAL A 88 AB 6 7 N GLU A 110 ? N GLU A 89 O TYR A 160 ? O TYR A 139 AB 7 8 N VAL A 165 ? N VAL A 144 O ASP A 141 ? O ASP A 120 AB 8 9 N ARG A 144 ? N ARG A 123 O THR A 128 ? O THR A 107 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O3 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 XYP _pdbx_validate_close_contact.auth_seq_id_1 2 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 "O4'" _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 FX3 _pdbx_validate_close_contact.auth_seq_id_2 1200 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 47 ? ? -94.94 -62.54 2 1 ASN A 174 ? ? -102.29 -147.99 # loop_ _pdbx_molecule_features.prd_id _pdbx_molecule_features.name _pdbx_molecule_features.type _pdbx_molecule_features.class _pdbx_molecule_features.details PRD_900116 4beta-beta-xylobiose Oligosaccharide Metabolism oligosaccharide PRD_900117 4beta-beta-xylotriose Oligosaccharide Metabolism oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900117 B 2 PRD_900116 C # _pdbx_entry_details.entry_id 2VGD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'NO DATABASE REFERENCE SINCE GENE ISOLATED FROM SOIL SAMPLE.' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -20 ? A MET 1 2 1 Y 1 A ILE -19 ? A ILE 2 3 1 Y 1 A SER -18 ? A SER 3 4 1 Y 1 A LEU -17 ? A LEU 4 5 1 Y 1 A LYS -16 ? A LYS 5 6 1 Y 1 A ARG -15 ? A ARG 6 7 1 Y 1 A VAL -14 ? A VAL 7 8 1 Y 1 A ALA -13 ? A ALA 8 9 1 Y 1 A ALA -12 ? A ALA 9 10 1 Y 1 A LEU -11 ? A LEU 10 11 1 Y 1 A LEU -10 ? A LEU 11 12 1 Y 1 A CYS -9 ? A CYS 12 13 1 Y 1 A VAL -8 ? A VAL 13 14 1 Y 1 A ALA -7 ? A ALA 14 15 1 Y 1 A GLY -6 ? A GLY 15 16 1 Y 1 A LEU -5 ? A LEU 16 17 1 Y 1 A GLY -4 ? A GLY 17 18 1 Y 1 A MET -3 ? A MET 18 19 1 Y 1 A SER -2 ? A SER 19 20 1 Y 1 A ALA -1 ? A ALA 20 21 1 Y 1 A ALA 0 ? A ALA 21 22 1 Y 1 A ASN 1 ? A ASN 22 23 1 Y 1 A GLY 197 ? A GLY 218 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FX3 O2 O N N 88 FX3 C9 C N N 89 FX3 C8 C N N 90 FX3 C7 C N N 91 FX3 C1 C Y N 92 FX3 C6 C Y N 93 FX3 C5 C Y N 94 FX3 C4 C Y N 95 FX3 O4 O N N 96 FX3 C3 C Y N 97 FX3 O3 O N N 98 FX3 C10 C N N 99 FX3 C2 C Y N 100 FX3 "O5'" O N N 101 FX3 "C5'" C N N 102 FX3 "C4'" C N S 103 FX3 "O4'" O N N 104 FX3 "C3'" C N R 105 FX3 "O3'" O N N 106 FX3 "C2'" C N S 107 FX3 "O2'" O N N 108 FX3 "C1'" C N R 109 FX3 OXT O N N 110 FX3 H8 H N N 111 FX3 H7 H N N 112 FX3 H6 H N N 113 FX3 H2 H N N 114 FX3 H5 H N N 115 FX3 H4 H N N 116 FX3 H101 H N N 117 FX3 H102 H N N 118 FX3 H103 H N N 119 FX3 "H5'1" H N N 120 FX3 "H5'2" H N N 121 FX3 "H4'" H N N 122 FX3 "H3'" H N N 123 FX3 "H1'" H N N 124 FX3 HA H N N 125 FX3 "H2'" H N N 126 FX3 HB H N N 127 FX3 HOT H N N 128 GLN N N N N 129 GLN CA C N S 130 GLN C C N N 131 GLN O O N N 132 GLN CB C N N 133 GLN CG C N N 134 GLN CD C N N 135 GLN OE1 O N N 136 GLN NE2 N N N 137 GLN OXT O N N 138 GLN H H N N 139 GLN H2 H N N 140 GLN HA H N N 141 GLN HB2 H N N 142 GLN HB3 H N N 143 GLN HG2 H N N 144 GLN HG3 H N N 145 GLN HE21 H N N 146 GLN HE22 H N N 147 GLN HXT H N N 148 GLU N N N N 149 GLU CA C N S 150 GLU C C N N 151 GLU O O N N 152 GLU CB C N N 153 GLU CG C N N 154 GLU CD C N N 155 GLU OE1 O N N 156 GLU OE2 O N N 157 GLU OXT O N N 158 GLU H H N N 159 GLU H2 H N N 160 GLU HA H N N 161 GLU HB2 H N N 162 GLU HB3 H N N 163 GLU HG2 H N N 164 GLU HG3 H N N 165 GLU HE2 H N N 166 GLU HXT H N N 167 GLY N N N N 168 GLY CA C N N 169 GLY C C N N 170 GLY O O N N 171 GLY OXT O N N 172 GLY H H N N 173 GLY H2 H N N 174 GLY HA2 H N N 175 GLY HA3 H N N 176 GLY HXT H N N 177 GOL C1 C N N 178 GOL O1 O N N 179 GOL C2 C N N 180 GOL O2 O N N 181 GOL C3 C N N 182 GOL O3 O N N 183 GOL H11 H N N 184 GOL H12 H N N 185 GOL HO1 H N N 186 GOL H2 H N N 187 GOL HO2 H N N 188 GOL H31 H N N 189 GOL H32 H N N 190 GOL HO3 H N N 191 HIS N N N N 192 HIS CA C N S 193 HIS C C N N 194 HIS O O N N 195 HIS CB C N N 196 HIS CG C Y N 197 HIS ND1 N Y N 198 HIS CD2 C Y N 199 HIS CE1 C Y N 200 HIS NE2 N Y N 201 HIS OXT O N N 202 HIS H H N N 203 HIS H2 H N N 204 HIS HA H N N 205 HIS HB2 H N N 206 HIS HB3 H N N 207 HIS HD1 H N N 208 HIS HD2 H N N 209 HIS HE1 H N N 210 HIS HE2 H N N 211 HIS HXT H N N 212 HOH O O N N 213 HOH H1 H N N 214 HOH H2 H N N 215 ILE N N N N 216 ILE CA C N S 217 ILE C C N N 218 ILE O O N N 219 ILE CB C N S 220 ILE CG1 C N N 221 ILE CG2 C N N 222 ILE CD1 C N N 223 ILE OXT O N N 224 ILE H H N N 225 ILE H2 H N N 226 ILE HA H N N 227 ILE HB H N N 228 ILE HG12 H N N 229 ILE HG13 H N N 230 ILE HG21 H N N 231 ILE HG22 H N N 232 ILE HG23 H N N 233 ILE HD11 H N N 234 ILE HD12 H N N 235 ILE HD13 H N N 236 ILE HXT H N N 237 LEU N N N N 238 LEU CA C N S 239 LEU C C N N 240 LEU O O N N 241 LEU CB C N N 242 LEU CG C N N 243 LEU CD1 C N N 244 LEU CD2 C N N 245 LEU OXT O N N 246 LEU H H N N 247 LEU H2 H N N 248 LEU HA H N N 249 LEU HB2 H N N 250 LEU HB3 H N N 251 LEU HG H N N 252 LEU HD11 H N N 253 LEU HD12 H N N 254 LEU HD13 H N N 255 LEU HD21 H N N 256 LEU HD22 H N N 257 LEU HD23 H N N 258 LEU HXT H N N 259 LYS N N N N 260 LYS CA C N S 261 LYS C C N N 262 LYS O O N N 263 LYS CB C N N 264 LYS CG C N N 265 LYS CD C N N 266 LYS CE C N N 267 LYS NZ N N N 268 LYS OXT O N N 269 LYS H H N N 270 LYS H2 H N N 271 LYS HA H N N 272 LYS HB2 H N N 273 LYS HB3 H N N 274 LYS HG2 H N N 275 LYS HG3 H N N 276 LYS HD2 H N N 277 LYS HD3 H N N 278 LYS HE2 H N N 279 LYS HE3 H N N 280 LYS HZ1 H N N 281 LYS HZ2 H N N 282 LYS HZ3 H N N 283 LYS HXT H N N 284 MET N N N N 285 MET CA C N S 286 MET C C N N 287 MET O O N N 288 MET CB C N N 289 MET CG C N N 290 MET SD S N N 291 MET CE C N N 292 MET OXT O N N 293 MET H H N N 294 MET H2 H N N 295 MET HA H N N 296 MET HB2 H N N 297 MET HB3 H N N 298 MET HG2 H N N 299 MET HG3 H N N 300 MET HE1 H N N 301 MET HE2 H N N 302 MET HE3 H N N 303 MET HXT H N N 304 NA NA NA N N 305 PHE N N N N 306 PHE CA C N S 307 PHE C C N N 308 PHE O O N N 309 PHE CB C N N 310 PHE CG C Y N 311 PHE CD1 C Y N 312 PHE CD2 C Y N 313 PHE CE1 C Y N 314 PHE CE2 C Y N 315 PHE CZ C Y N 316 PHE OXT O N N 317 PHE H H N N 318 PHE H2 H N N 319 PHE HA H N N 320 PHE HB2 H N N 321 PHE HB3 H N N 322 PHE HD1 H N N 323 PHE HD2 H N N 324 PHE HE1 H N N 325 PHE HE2 H N N 326 PHE HZ H N N 327 PHE HXT H N N 328 PRO N N N N 329 PRO CA C N S 330 PRO C C N N 331 PRO O O N N 332 PRO CB C N N 333 PRO CG C N N 334 PRO CD C N N 335 PRO OXT O N N 336 PRO H H N N 337 PRO HA H N N 338 PRO HB2 H N N 339 PRO HB3 H N N 340 PRO HG2 H N N 341 PRO HG3 H N N 342 PRO HD2 H N N 343 PRO HD3 H N N 344 PRO HXT H N N 345 SER N N N N 346 SER CA C N S 347 SER C C N N 348 SER O O N N 349 SER CB C N N 350 SER OG O N N 351 SER OXT O N N 352 SER H H N N 353 SER H2 H N N 354 SER HA H N N 355 SER HB2 H N N 356 SER HB3 H N N 357 SER HG H N N 358 SER HXT H N N 359 THR N N N N 360 THR CA C N S 361 THR C C N N 362 THR O O N N 363 THR CB C N R 364 THR OG1 O N N 365 THR CG2 C N N 366 THR OXT O N N 367 THR H H N N 368 THR H2 H N N 369 THR HA H N N 370 THR HB H N N 371 THR HG1 H N N 372 THR HG21 H N N 373 THR HG22 H N N 374 THR HG23 H N N 375 THR HXT H N N 376 TRP N N N N 377 TRP CA C N S 378 TRP C C N N 379 TRP O O N N 380 TRP CB C N N 381 TRP CG C Y N 382 TRP CD1 C Y N 383 TRP CD2 C Y N 384 TRP NE1 N Y N 385 TRP CE2 C Y N 386 TRP CE3 C Y N 387 TRP CZ2 C Y N 388 TRP CZ3 C Y N 389 TRP CH2 C Y N 390 TRP OXT O N N 391 TRP H H N N 392 TRP H2 H N N 393 TRP HA H N N 394 TRP HB2 H N N 395 TRP HB3 H N N 396 TRP HD1 H N N 397 TRP HE1 H N N 398 TRP HE3 H N N 399 TRP HZ2 H N N 400 TRP HZ3 H N N 401 TRP HH2 H N N 402 TRP HXT H N N 403 TYR N N N N 404 TYR CA C N S 405 TYR C C N N 406 TYR O O N N 407 TYR CB C N N 408 TYR CG C Y N 409 TYR CD1 C Y N 410 TYR CD2 C Y N 411 TYR CE1 C Y N 412 TYR CE2 C Y N 413 TYR CZ C Y N 414 TYR OH O N N 415 TYR OXT O N N 416 TYR H H N N 417 TYR H2 H N N 418 TYR HA H N N 419 TYR HB2 H N N 420 TYR HB3 H N N 421 TYR HD1 H N N 422 TYR HD2 H N N 423 TYR HE1 H N N 424 TYR HE2 H N N 425 TYR HH H N N 426 TYR HXT H N N 427 VAL N N N N 428 VAL CA C N S 429 VAL C C N N 430 VAL O O N N 431 VAL CB C N N 432 VAL CG1 C N N 433 VAL CG2 C N N 434 VAL OXT O N N 435 VAL H H N N 436 VAL H2 H N N 437 VAL HA H N N 438 VAL HB H N N 439 VAL HG11 H N N 440 VAL HG12 H N N 441 VAL HG13 H N N 442 VAL HG21 H N N 443 VAL HG22 H N N 444 VAL HG23 H N N 445 VAL HXT H N N 446 XYP O1 O N N 447 XYP C1 C N R 448 XYP C2 C N R 449 XYP C3 C N S 450 XYP C4 C N R 451 XYP C5 C N N 452 XYP O2 O N N 453 XYP O3 O N N 454 XYP O4 O N N 455 XYP O5 O N N 456 XYP HO1 H N N 457 XYP H1 H N N 458 XYP H2 H N N 459 XYP H3 H N N 460 XYP H4 H N N 461 XYP H51 H N N 462 XYP H52 H N N 463 XYP HO2 H N N 464 XYP HO3 H N N 465 XYP HO4 H N N 466 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FX3 O2 C9 doub N N 83 FX3 C9 C8 sing N N 84 FX3 C9 "O5'" sing N N 85 FX3 C8 C7 doub N E 86 FX3 C7 C1 sing N N 87 FX3 C1 C6 sing Y N 88 FX3 C1 C2 doub Y N 89 FX3 C6 C5 doub Y N 90 FX3 C5 C4 sing Y N 91 FX3 C4 O4 sing N N 92 FX3 C4 C3 doub Y N 93 FX3 C3 O3 sing N N 94 FX3 C3 C2 sing Y N 95 FX3 O3 C10 sing N N 96 FX3 "O5'" "C5'" sing N N 97 FX3 "C5'" "C4'" sing N N 98 FX3 "C4'" "O4'" sing N N 99 FX3 "C4'" "C3'" sing N N 100 FX3 "O4'" "C1'" sing N N 101 FX3 "C3'" "O3'" sing N N 102 FX3 "C3'" "C2'" sing N N 103 FX3 "C2'" "O2'" sing N N 104 FX3 "C2'" "C1'" sing N N 105 FX3 "C1'" OXT sing N N 106 FX3 C8 H8 sing N N 107 FX3 C7 H7 sing N N 108 FX3 C6 H6 sing N N 109 FX3 C2 H2 sing N N 110 FX3 C5 H5 sing N N 111 FX3 O4 H4 sing N N 112 FX3 C10 H101 sing N N 113 FX3 C10 H102 sing N N 114 FX3 C10 H103 sing N N 115 FX3 "C5'" "H5'1" sing N N 116 FX3 "C5'" "H5'2" sing N N 117 FX3 "C4'" "H4'" sing N N 118 FX3 "C3'" "H3'" sing N N 119 FX3 "C1'" "H1'" sing N N 120 FX3 "O3'" HA sing N N 121 FX3 "C2'" "H2'" sing N N 122 FX3 "O2'" HB sing N N 123 FX3 OXT HOT sing N N 124 GLN N CA sing N N 125 GLN N H sing N N 126 GLN N H2 sing N N 127 GLN CA C sing N N 128 GLN CA CB sing N N 129 GLN CA HA sing N N 130 GLN C O doub N N 131 GLN C OXT sing N N 132 GLN CB CG sing N N 133 GLN CB HB2 sing N N 134 GLN CB HB3 sing N N 135 GLN CG CD sing N N 136 GLN CG HG2 sing N N 137 GLN CG HG3 sing N N 138 GLN CD OE1 doub N N 139 GLN CD NE2 sing N N 140 GLN NE2 HE21 sing N N 141 GLN NE2 HE22 sing N N 142 GLN OXT HXT sing N N 143 GLU N CA sing N N 144 GLU N H sing N N 145 GLU N H2 sing N N 146 GLU CA C sing N N 147 GLU CA CB sing N N 148 GLU CA HA sing N N 149 GLU C O doub N N 150 GLU C OXT sing N N 151 GLU CB CG sing N N 152 GLU CB HB2 sing N N 153 GLU CB HB3 sing N N 154 GLU CG CD sing N N 155 GLU CG HG2 sing N N 156 GLU CG HG3 sing N N 157 GLU CD OE1 doub N N 158 GLU CD OE2 sing N N 159 GLU OE2 HE2 sing N N 160 GLU OXT HXT sing N N 161 GLY N CA sing N N 162 GLY N H sing N N 163 GLY N H2 sing N N 164 GLY CA C sing N N 165 GLY CA HA2 sing N N 166 GLY CA HA3 sing N N 167 GLY C O doub N N 168 GLY C OXT sing N N 169 GLY OXT HXT sing N N 170 GOL C1 O1 sing N N 171 GOL C1 C2 sing N N 172 GOL C1 H11 sing N N 173 GOL C1 H12 sing N N 174 GOL O1 HO1 sing N N 175 GOL C2 O2 sing N N 176 GOL C2 C3 sing N N 177 GOL C2 H2 sing N N 178 GOL O2 HO2 sing N N 179 GOL C3 O3 sing N N 180 GOL C3 H31 sing N N 181 GOL C3 H32 sing N N 182 GOL O3 HO3 sing N N 183 HIS N CA sing N N 184 HIS N H sing N N 185 HIS N H2 sing N N 186 HIS CA C sing N N 187 HIS CA CB sing N N 188 HIS CA HA sing N N 189 HIS C O doub N N 190 HIS C OXT sing N N 191 HIS CB CG sing N N 192 HIS CB HB2 sing N N 193 HIS CB HB3 sing N N 194 HIS CG ND1 sing Y N 195 HIS CG CD2 doub Y N 196 HIS ND1 CE1 doub Y N 197 HIS ND1 HD1 sing N N 198 HIS CD2 NE2 sing Y N 199 HIS CD2 HD2 sing N N 200 HIS CE1 NE2 sing Y N 201 HIS CE1 HE1 sing N N 202 HIS NE2 HE2 sing N N 203 HIS OXT HXT sing N N 204 HOH O H1 sing N N 205 HOH O H2 sing N N 206 ILE N CA sing N N 207 ILE N H sing N N 208 ILE N H2 sing N N 209 ILE CA C sing N N 210 ILE CA CB sing N N 211 ILE CA HA sing N N 212 ILE C O doub N N 213 ILE C OXT sing N N 214 ILE CB CG1 sing N N 215 ILE CB CG2 sing N N 216 ILE CB HB sing N N 217 ILE CG1 CD1 sing N N 218 ILE CG1 HG12 sing N N 219 ILE CG1 HG13 sing N N 220 ILE CG2 HG21 sing N N 221 ILE CG2 HG22 sing N N 222 ILE CG2 HG23 sing N N 223 ILE CD1 HD11 sing N N 224 ILE CD1 HD12 sing N N 225 ILE CD1 HD13 sing N N 226 ILE OXT HXT sing N N 227 LEU N CA sing N N 228 LEU N H sing N N 229 LEU N H2 sing N N 230 LEU CA C sing N N 231 LEU CA CB sing N N 232 LEU CA HA sing N N 233 LEU C O doub N N 234 LEU C OXT sing N N 235 LEU CB CG sing N N 236 LEU CB HB2 sing N N 237 LEU CB HB3 sing N N 238 LEU CG CD1 sing N N 239 LEU CG CD2 sing N N 240 LEU CG HG sing N N 241 LEU CD1 HD11 sing N N 242 LEU CD1 HD12 sing N N 243 LEU CD1 HD13 sing N N 244 LEU CD2 HD21 sing N N 245 LEU CD2 HD22 sing N N 246 LEU CD2 HD23 sing N N 247 LEU OXT HXT sing N N 248 LYS N CA sing N N 249 LYS N H sing N N 250 LYS N H2 sing N N 251 LYS CA C sing N N 252 LYS CA CB sing N N 253 LYS CA HA sing N N 254 LYS C O doub N N 255 LYS C OXT sing N N 256 LYS CB CG sing N N 257 LYS CB HB2 sing N N 258 LYS CB HB3 sing N N 259 LYS CG CD sing N N 260 LYS CG HG2 sing N N 261 LYS CG HG3 sing N N 262 LYS CD CE sing N N 263 LYS CD HD2 sing N N 264 LYS CD HD3 sing N N 265 LYS CE NZ sing N N 266 LYS CE HE2 sing N N 267 LYS CE HE3 sing N N 268 LYS NZ HZ1 sing N N 269 LYS NZ HZ2 sing N N 270 LYS NZ HZ3 sing N N 271 LYS OXT HXT sing N N 272 MET N CA sing N N 273 MET N H sing N N 274 MET N H2 sing N N 275 MET CA C sing N N 276 MET CA CB sing N N 277 MET CA HA sing N N 278 MET C O doub N N 279 MET C OXT sing N N 280 MET CB CG sing N N 281 MET CB HB2 sing N N 282 MET CB HB3 sing N N 283 MET CG SD sing N N 284 MET CG HG2 sing N N 285 MET CG HG3 sing N N 286 MET SD CE sing N N 287 MET CE HE1 sing N N 288 MET CE HE2 sing N N 289 MET CE HE3 sing N N 290 MET OXT HXT sing N N 291 PHE N CA sing N N 292 PHE N H sing N N 293 PHE N H2 sing N N 294 PHE CA C sing N N 295 PHE CA CB sing N N 296 PHE CA HA sing N N 297 PHE C O doub N N 298 PHE C OXT sing N N 299 PHE CB CG sing N N 300 PHE CB HB2 sing N N 301 PHE CB HB3 sing N N 302 PHE CG CD1 doub Y N 303 PHE CG CD2 sing Y N 304 PHE CD1 CE1 sing Y N 305 PHE CD1 HD1 sing N N 306 PHE CD2 CE2 doub Y N 307 PHE CD2 HD2 sing N N 308 PHE CE1 CZ doub Y N 309 PHE CE1 HE1 sing N N 310 PHE CE2 CZ sing Y N 311 PHE CE2 HE2 sing N N 312 PHE CZ HZ sing N N 313 PHE OXT HXT sing N N 314 PRO N CA sing N N 315 PRO N CD sing N N 316 PRO N H sing N N 317 PRO CA C sing N N 318 PRO CA CB sing N N 319 PRO CA HA sing N N 320 PRO C O doub N N 321 PRO C OXT sing N N 322 PRO CB CG sing N N 323 PRO CB HB2 sing N N 324 PRO CB HB3 sing N N 325 PRO CG CD sing N N 326 PRO CG HG2 sing N N 327 PRO CG HG3 sing N N 328 PRO CD HD2 sing N N 329 PRO CD HD3 sing N N 330 PRO OXT HXT sing N N 331 SER N CA sing N N 332 SER N H sing N N 333 SER N H2 sing N N 334 SER CA C sing N N 335 SER CA CB sing N N 336 SER CA HA sing N N 337 SER C O doub N N 338 SER C OXT sing N N 339 SER CB OG sing N N 340 SER CB HB2 sing N N 341 SER CB HB3 sing N N 342 SER OG HG sing N N 343 SER OXT HXT sing N N 344 THR N CA sing N N 345 THR N H sing N N 346 THR N H2 sing N N 347 THR CA C sing N N 348 THR CA CB sing N N 349 THR CA HA sing N N 350 THR C O doub N N 351 THR C OXT sing N N 352 THR CB OG1 sing N N 353 THR CB CG2 sing N N 354 THR CB HB sing N N 355 THR OG1 HG1 sing N N 356 THR CG2 HG21 sing N N 357 THR CG2 HG22 sing N N 358 THR CG2 HG23 sing N N 359 THR OXT HXT sing N N 360 TRP N CA sing N N 361 TRP N H sing N N 362 TRP N H2 sing N N 363 TRP CA C sing N N 364 TRP CA CB sing N N 365 TRP CA HA sing N N 366 TRP C O doub N N 367 TRP C OXT sing N N 368 TRP CB CG sing N N 369 TRP CB HB2 sing N N 370 TRP CB HB3 sing N N 371 TRP CG CD1 doub Y N 372 TRP CG CD2 sing Y N 373 TRP CD1 NE1 sing Y N 374 TRP CD1 HD1 sing N N 375 TRP CD2 CE2 doub Y N 376 TRP CD2 CE3 sing Y N 377 TRP NE1 CE2 sing Y N 378 TRP NE1 HE1 sing N N 379 TRP CE2 CZ2 sing Y N 380 TRP CE3 CZ3 doub Y N 381 TRP CE3 HE3 sing N N 382 TRP CZ2 CH2 doub Y N 383 TRP CZ2 HZ2 sing N N 384 TRP CZ3 CH2 sing Y N 385 TRP CZ3 HZ3 sing N N 386 TRP CH2 HH2 sing N N 387 TRP OXT HXT sing N N 388 TYR N CA sing N N 389 TYR N H sing N N 390 TYR N H2 sing N N 391 TYR CA C sing N N 392 TYR CA CB sing N N 393 TYR CA HA sing N N 394 TYR C O doub N N 395 TYR C OXT sing N N 396 TYR CB CG sing N N 397 TYR CB HB2 sing N N 398 TYR CB HB3 sing N N 399 TYR CG CD1 doub Y N 400 TYR CG CD2 sing Y N 401 TYR CD1 CE1 sing Y N 402 TYR CD1 HD1 sing N N 403 TYR CD2 CE2 doub Y N 404 TYR CD2 HD2 sing N N 405 TYR CE1 CZ doub Y N 406 TYR CE1 HE1 sing N N 407 TYR CE2 CZ sing Y N 408 TYR CE2 HE2 sing N N 409 TYR CZ OH sing N N 410 TYR OH HH sing N N 411 TYR OXT HXT sing N N 412 VAL N CA sing N N 413 VAL N H sing N N 414 VAL N H2 sing N N 415 VAL CA C sing N N 416 VAL CA CB sing N N 417 VAL CA HA sing N N 418 VAL C O doub N N 419 VAL C OXT sing N N 420 VAL CB CG1 sing N N 421 VAL CB CG2 sing N N 422 VAL CB HB sing N N 423 VAL CG1 HG11 sing N N 424 VAL CG1 HG12 sing N N 425 VAL CG1 HG13 sing N N 426 VAL CG2 HG21 sing N N 427 VAL CG2 HG22 sing N N 428 VAL CG2 HG23 sing N N 429 VAL OXT HXT sing N N 430 XYP O1 C1 sing N N 431 XYP O1 HO1 sing N N 432 XYP C1 C2 sing N N 433 XYP C1 O5 sing N N 434 XYP C1 H1 sing N N 435 XYP C2 C3 sing N N 436 XYP C2 O2 sing N N 437 XYP C2 H2 sing N N 438 XYP C3 C4 sing N N 439 XYP C3 O3 sing N N 440 XYP C3 H3 sing N N 441 XYP C4 C5 sing N N 442 XYP C4 O4 sing N N 443 XYP C4 H4 sing N N 444 XYP C5 O5 sing N N 445 XYP C5 H51 sing N N 446 XYP C5 H52 sing N N 447 XYP O2 HO2 sing N N 448 XYP O3 HO3 sing N N 449 XYP O4 HO4 sing N N 450 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 XYP 1 n 2 XYP 2 n 2 XYP 3 n 3 XYP 1 n 3 XYP 2 n # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'APO FORM OF ENXYN11A' # _atom_sites.entry_id 2VGD _atom_sites.fract_transf_matrix[1][1] 0.013077 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013077 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009747 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_