HEADER PHOTOSYNTHESIS 13-DEC-07 2VJT TITLE THE STRUCTURE OF ALLOPHYCOCYANIN FROM GLOEOBACTER VIOLACEUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALLOPHYCOCYANIN ALPHA SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: ALLOPHYCOCYANIN BETA SUBUNIT; COMPND 6 CHAIN: B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GLOEOBACTER VIOLACEUS; SOURCE 3 ORGANISM_TAXID: 33072; SOURCE 4 STRAIN: PCC7421; SOURCE 5 OTHER_DETAILS: PASTEUR CULTURE COLLECTION; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: GLOEOBACTER VIOLACEUS; SOURCE 8 ORGANISM_TAXID: 33072; SOURCE 9 STRAIN: PCC7421; SOURCE 10 OTHER_DETAILS: PASTEUR CULTURE COLLECTION KEYWDS PHOTOSYNTHESIS, LIGHT HARVESTING EXPDTA X-RAY DIFFRACTION AUTHOR J.W.MURRAY,S.BENSON,J.NIELD,J.BARBER REVDAT 4 13-DEC-23 2VJT 1 LINK REVDAT 3 13-JUL-11 2VJT 1 VERSN REVDAT 2 24-FEB-09 2VJT 1 VERSN REVDAT 1 25-MAR-08 2VJT 0 JRNL AUTH J.W.MURRAY,S.BENSON,J.NIELD,J.BARBER JRNL TITL THE STRUCTURES OF THE PHYCOBILIPROTEINS OF GLOEOBACTER JRNL TITL 2 VIOLACEUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 11691 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 553 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 10.48 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 29.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 155 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1520 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2432 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 40.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.19900 REMARK 3 B22 (A**2) : -3.19900 REMARK 3 B33 (A**2) : 4.79800 REMARK 3 B12 (A**2) : -1.59900 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.795 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.336 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.257 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.199 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.885 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2561 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3477 ; 1.910 ; 2.024 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 319 ; 5.773 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 101 ;38.332 ;23.564 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 412 ;16.946 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;20.672 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 392 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2878 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 623 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1259 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 58 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.190 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.212 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2061 ; 0.714 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2534 ; 0.816 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1203 ; 1.407 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 943 ; 2.042 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 161 REMARK 3 RESIDUE RANGE : A 1081 A 1081 REMARK 3 ORIGIN FOR THE GROUP (A): 33.0970 18.9880 25.4840 REMARK 3 T TENSOR REMARK 3 T11: 0.1608 T22: 0.1000 REMARK 3 T33: 0.0107 T12: 0.0210 REMARK 3 T13: -0.0126 T23: -0.0125 REMARK 3 L TENSOR REMARK 3 L11: 3.5497 L22: 1.9039 REMARK 3 L33: 0.8829 L12: -0.5956 REMARK 3 L13: -0.4104 L23: -0.0939 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: -0.2041 S13: -0.2325 REMARK 3 S21: 0.2188 S22: -0.0129 S23: -0.3691 REMARK 3 S31: 0.0725 S32: 0.1885 S33: 0.0048 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 161 REMARK 3 RESIDUE RANGE : B 1081 B 1081 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5940 27.3830 13.5670 REMARK 3 T TENSOR REMARK 3 T11: 0.1114 T22: 0.0878 REMARK 3 T33: 0.0600 T12: -0.0383 REMARK 3 T13: -0.0159 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 4.6437 L22: 0.1621 REMARK 3 L33: 0.2957 L12: -0.1694 REMARK 3 L13: -0.0410 L23: -0.1614 REMARK 3 S TENSOR REMARK 3 S11: -0.1166 S12: 0.2869 S13: -0.1387 REMARK 3 S21: -0.1007 S22: 0.0729 S23: 0.0424 REMARK 3 S31: 0.0492 S32: -0.0482 S33: 0.0436 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VJT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1290034746. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97550 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11694 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 29.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.980 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.07 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.990 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1KN1 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% W/V PEG 1500 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 82.35600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.54826 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 21.56167 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 82.35600 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 47.54826 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 21.56167 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 82.35600 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 47.54826 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 21.56167 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 82.35600 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 47.54826 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 21.56167 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 82.35600 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 47.54826 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 21.56167 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 82.35600 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 47.54826 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 21.56167 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 95.09652 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 43.12333 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 95.09652 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 43.12333 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 95.09652 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 43.12333 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 95.09652 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 43.12333 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 95.09652 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 43.12333 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 95.09652 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 43.12333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 41180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 89760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -331.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 64.68500 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 64.68500 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 64.68500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 66 53.59 -101.04 REMARK 500 PRO A 68 -59.22 -25.80 REMARK 500 ALA B 48 -65.74 -23.40 REMARK 500 LEU B 60 -66.28 -127.91 REMARK 500 THR B 74 139.33 88.20 REMARK 500 VAL B 108 -57.30 -129.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYC A1081 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CYC B1081 DBREF 2VJT A 1 161 UNP Q7NL80 Q7NL80_GLOVI 1 161 DBREF 2VJT B 1 161 UNP Q7NL79 Q7NL79_GLOVI 1 161 SEQADV 2VJT ILE A 61 UNP Q7NL80 LYS 61 CONFLICT SEQRES 1 A 161 MET SER VAL LEU THR LYS ALA ILE VAL ASN ALA ASP ALA SEQRES 2 A 161 GLU ALA ARG TYR LEU SER PRO GLY GLU LEU ASP ARG ILE SEQRES 3 A 161 LYS SER PHE VAL ALA SER GLY GLU ARG ARG LEU ARG ILE SEQRES 4 A 161 ALA GLN THR LEU THR GLU ALA ARG GLU ARG ILE VAL LYS SEQRES 5 A 161 GLN ALA GLY ASP GLN LEU PHE GLN ILE ARG PRO ASP VAL SEQRES 6 A 161 VAL SER PRO GLY GLY ASN ALA TYR GLY GLU LYS MET THR SEQRES 7 A 161 ALA LEU CYS LEU ARG ASP LEU ASP TYR TYR LEU ARG LEU SEQRES 8 A 161 VAL THR TYR GLY ILE VAL ALA GLY ASP VAL THR PRO ILE SEQRES 9 A 161 GLU GLU ILE GLY ILE ILE GLY VAL LYS GLU MET TYR ASN SEQRES 10 A 161 SER LEU GLN THR PRO ILE PRO ALA VAL ALA GLU GLY VAL SEQRES 11 A 161 ARG ALA MET LYS ASN VAL ALA THR SER LEU LEU SER GLY SEQRES 12 A 161 ASP ASP ALA ALA GLU ALA GLY PHE TYR PHE ASP TYR LEU SEQRES 13 A 161 VAL GLY ALA MET GLN SEQRES 1 B 161 MET GLN ASP ALA ILE THR ALA VAL ILE ASN ASN TYR ASP SEQRES 2 B 161 VAL GLN GLY LYS TYR LEU ASP GLY ALA ALA LEU ASP LYS SEQRES 3 B 161 LEU LYS ALA TYR PHE THR THR GLY ALA VAL ARG VAL ARG SEQRES 4 B 161 ALA ALA ALA VAL ILE SER SER ASN ALA THR THR ILE ILE SEQRES 5 B 161 LYS GLU ALA ALA ALA LYS ALA LEU ILE TYR SER ASP LEU SEQRES 6 B 161 THR ARG PRO GLY GLY MEN MET TYR THR THR ARG ARG TYR SEQRES 7 B 161 ALA ALA CYS ILE ARG ASP MET ASP TYR PHE LEU ARG TYR SEQRES 8 B 161 ALA THR TYR ALA MET LEU ALA GLY ASP PRO SER ILE LEU SEQRES 9 B 161 ASP GLU ARG VAL LEU ASN GLY LEU LYS GLU THR TYR ASN SEQRES 10 B 161 SER LEU GLY VAL PRO ILE ALA ALA THR VAL GLY GLY ILE SEQRES 11 B 161 GLN ALA MET LYS GLU VAL VAL GLY GLY LEU VAL GLY PRO SEQRES 12 B 161 ASP ALA ALA LYS GLU ALA SER ILE TYR PHE ASP TYR LEU SEQRES 13 B 161 SER SER GLY LEU SER MODRES 2VJT MEN B 71 ASN N-METHYL ASPARAGINE HET MEN B 71 9 HET CYC A1081 43 HET CYC B1081 43 HETNAM MEN N-METHYL ASPARAGINE HETNAM CYC PHYCOCYANOBILIN FORMUL 2 MEN C5 H10 N2 O3 FORMUL 3 CYC 2(C33 H40 N4 O6) FORMUL 5 HOH *17(H2 O) HELIX 1 1 SER A 2 GLU A 14 1 13 HELIX 2 2 SER A 19 SER A 32 1 14 HELIX 3 3 SER A 32 ALA A 46 1 15 HELIX 4 4 ALA A 46 ARG A 62 1 17 HELIX 5 5 PRO A 63 SER A 67 5 5 HELIX 6 6 GLY A 74 GLY A 99 1 26 HELIX 7 7 VAL A 101 ILE A 109 1 9 HELIX 8 8 GLY A 111 GLN A 120 1 10 HELIX 9 9 PRO A 122 SER A 139 1 18 HELIX 10 10 SER A 142 MET A 160 1 19 HELIX 11 11 ASP B 3 VAL B 14 1 12 HELIX 12 12 ASP B 20 THR B 32 1 13 HELIX 13 13 THR B 33 LEU B 60 1 28 HELIX 14 14 SER B 63 ARG B 67 5 5 HELIX 15 15 THR B 74 GLY B 99 1 26 HELIX 16 16 PRO B 101 VAL B 108 1 8 HELIX 17 17 GLY B 111 GLY B 120 1 10 HELIX 18 18 PRO B 122 GLY B 142 1 21 HELIX 19 19 ALA B 145 SER B 161 1 17 LINK SG CYS A 81 CAC CYC A1081 1555 1555 1.83 LINK C GLY B 70 N MEN B 71 1555 1555 1.33 LINK C MEN B 71 N MET B 72 1555 1555 1.33 LINK SG CYS B 81 CAC CYC B1081 1555 1555 1.81 SITE 1 AC1 23 VAL A 65 ASN A 71 ALA A 72 MET A 77 SITE 2 AC1 23 CYS A 81 ARG A 83 ASP A 84 TYR A 87 SITE 3 AC1 23 TYR A 88 ILE A 107 MET A 115 TYR A 116 SITE 4 AC1 23 LEU A 119 THR A 121 PRO A 122 VAL A 126 SITE 5 AC1 23 HOH A2009 ILE B 61 TYR B 62 THR B 66 SITE 6 AC1 23 TYR B 73 THR B 74 TYR B 78 SITE 1 AC2 13 LEU B 60 MEN B 71 MET B 72 ARG B 76 SITE 2 AC2 13 ARG B 77 CYS B 81 ARG B 83 ASP B 84 SITE 3 AC2 13 TYR B 87 ARG B 107 LEU B 119 PRO B 122 SITE 4 AC2 13 THR B 126 CRYST1 164.712 164.712 64.685 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006071 0.003505 0.000000 0.00000 SCALE2 0.000000 0.007010 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015460 0.00000