data_2VKJ # _entry.id 2VKJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VKJ pdb_00002vkj 10.2210/pdb2vkj/pdb PDBE EBI-34839 ? ? WWPDB D_1290034839 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-04-08 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VKJ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-12-19 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2VKO _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'STRUCTURE OF THE SOLUBLE DOMAIN OF THE MEMBRANE PROTEIN TM1634 FROM THERMOTOGA MARITIMA' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'McCleverty, C.J.' 1 'Columbus, L.' 2 'Kreusch, A.' 3 'Lesley, S.A.' 4 'Joint Center for Structural Genomics (JCSG)' 5 # _citation.id primary _citation.title 'Structure and Ligand Binding of the Soluble Domain of a Thermotoga Maritima Membrane Protein of Unknown Function Tm1634.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 17 _citation.page_first 869 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18369189 _citation.pdbx_database_id_DOI 10.1110/PS.083432208 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mccleverty, C.J.' 1 ? primary 'Columbus, L.' 2 ? primary 'Kreusch, A.' 3 ? primary 'Lesley, S.A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man TM1634 12303.146 2 ? ? 'SOLUBLE DOMAIN, RESIDUES 27-128' 'ADDITIONAL RESIDUES GSHM AT N-TERMINUS' 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 water nat water 18.015 215 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMNLAVKLTRMEKTLKAYELYIFSDYENFENYVKKEGLKIEGMELLKEKKARSLIAEGKDLFETANYGEALVFFEKAL NLSDNEEIKKIASFYLEECRKKLAGD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMNLAVKLTRMEKTLKAYELYIFSDYENFENYVKKEGLKIEGMELLKEKKARSLIAEGKDLFETANYGEALVFFEKAL NLSDNEEIKKIASFYLEECRKKLAGD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ASN n 1 6 LEU n 1 7 ALA n 1 8 VAL n 1 9 LYS n 1 10 LEU n 1 11 THR n 1 12 ARG n 1 13 MET n 1 14 GLU n 1 15 LYS n 1 16 THR n 1 17 LEU n 1 18 LYS n 1 19 ALA n 1 20 TYR n 1 21 GLU n 1 22 LEU n 1 23 TYR n 1 24 ILE n 1 25 PHE n 1 26 SER n 1 27 ASP n 1 28 TYR n 1 29 GLU n 1 30 ASN n 1 31 PHE n 1 32 GLU n 1 33 ASN n 1 34 TYR n 1 35 VAL n 1 36 LYS n 1 37 LYS n 1 38 GLU n 1 39 GLY n 1 40 LEU n 1 41 LYS n 1 42 ILE n 1 43 GLU n 1 44 GLY n 1 45 MET n 1 46 GLU n 1 47 LEU n 1 48 LEU n 1 49 LYS n 1 50 GLU n 1 51 LYS n 1 52 LYS n 1 53 ALA n 1 54 ARG n 1 55 SER n 1 56 LEU n 1 57 ILE n 1 58 ALA n 1 59 GLU n 1 60 GLY n 1 61 LYS n 1 62 ASP n 1 63 LEU n 1 64 PHE n 1 65 GLU n 1 66 THR n 1 67 ALA n 1 68 ASN n 1 69 TYR n 1 70 GLY n 1 71 GLU n 1 72 ALA n 1 73 LEU n 1 74 VAL n 1 75 PHE n 1 76 PHE n 1 77 GLU n 1 78 LYS n 1 79 ALA n 1 80 LEU n 1 81 ASN n 1 82 LEU n 1 83 SER n 1 84 ASP n 1 85 ASN n 1 86 GLU n 1 87 GLU n 1 88 ILE n 1 89 LYS n 1 90 LYS n 1 91 ILE n 1 92 ALA n 1 93 SER n 1 94 PHE n 1 95 TYR n 1 96 LEU n 1 97 GLU n 1 98 GLU n 1 99 CYS n 1 100 ARG n 1 101 LYS n 1 102 LYS n 1 103 LEU n 1 104 ALA n 1 105 GLY n 1 106 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'THERMOTOGA MARITIMA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 24 24 GLY GLY A . n A 1 2 SER 2 25 25 SER SER A . n A 1 3 HIS 3 26 26 HIS HIS A . n A 1 4 MET 4 27 27 MET MET A . n A 1 5 ASN 5 28 28 ASN ASN A . n A 1 6 LEU 6 29 29 LEU LEU A . n A 1 7 ALA 7 30 30 ALA ALA A . n A 1 8 VAL 8 31 31 VAL VAL A . n A 1 9 LYS 9 32 32 LYS LYS A . n A 1 10 LEU 10 33 33 LEU LEU A . n A 1 11 THR 11 34 34 THR THR A . n A 1 12 ARG 12 35 35 ARG ARG A . n A 1 13 MET 13 36 36 MET MET A . n A 1 14 GLU 14 37 37 GLU GLU A . n A 1 15 LYS 15 38 38 LYS LYS A . n A 1 16 THR 16 39 39 THR THR A . n A 1 17 LEU 17 40 40 LEU LEU A . n A 1 18 LYS 18 41 41 LYS LYS A . n A 1 19 ALA 19 42 42 ALA ALA A . n A 1 20 TYR 20 43 43 TYR TYR A . n A 1 21 GLU 21 44 44 GLU GLU A . n A 1 22 LEU 22 45 45 LEU LEU A . n A 1 23 TYR 23 46 46 TYR TYR A . n A 1 24 ILE 24 47 47 ILE ILE A . n A 1 25 PHE 25 48 48 PHE PHE A . n A 1 26 SER 26 49 49 SER SER A . n A 1 27 ASP 27 50 50 ASP ASP A . n A 1 28 TYR 28 51 51 TYR TYR A . n A 1 29 GLU 29 52 52 GLU GLU A . n A 1 30 ASN 30 53 53 ASN ASN A . n A 1 31 PHE 31 54 54 PHE PHE A . n A 1 32 GLU 32 55 55 GLU GLU A . n A 1 33 ASN 33 56 56 ASN ASN A . n A 1 34 TYR 34 57 57 TYR TYR A . n A 1 35 VAL 35 58 58 VAL VAL A . n A 1 36 LYS 36 59 59 LYS LYS A . n A 1 37 LYS 37 60 60 LYS LYS A . n A 1 38 GLU 38 61 61 GLU GLU A . n A 1 39 GLY 39 62 62 GLY GLY A . n A 1 40 LEU 40 63 63 LEU LEU A . n A 1 41 LYS 41 64 64 LYS LYS A . n A 1 42 ILE 42 65 65 ILE ILE A . n A 1 43 GLU 43 66 66 GLU GLU A . n A 1 44 GLY 44 67 67 GLY GLY A . n A 1 45 MET 45 68 68 MET MET A . n A 1 46 GLU 46 69 69 GLU GLU A . n A 1 47 LEU 47 70 70 LEU LEU A . n A 1 48 LEU 48 71 71 LEU LEU A . n A 1 49 LYS 49 72 72 LYS LYS A . n A 1 50 GLU 50 73 73 GLU GLU A . n A 1 51 LYS 51 74 74 LYS LYS A . n A 1 52 LYS 52 75 75 LYS LYS A . n A 1 53 ALA 53 76 76 ALA ALA A . n A 1 54 ARG 54 77 77 ARG ARG A . n A 1 55 SER 55 78 78 SER SER A . n A 1 56 LEU 56 79 79 LEU LEU A . n A 1 57 ILE 57 80 80 ILE ILE A . n A 1 58 ALA 58 81 81 ALA ALA A . n A 1 59 GLU 59 82 82 GLU GLU A . n A 1 60 GLY 60 83 83 GLY GLY A . n A 1 61 LYS 61 84 84 LYS LYS A . n A 1 62 ASP 62 85 85 ASP ASP A . n A 1 63 LEU 63 86 86 LEU LEU A . n A 1 64 PHE 64 87 87 PHE PHE A . n A 1 65 GLU 65 88 88 GLU GLU A . n A 1 66 THR 66 89 89 THR THR A . n A 1 67 ALA 67 90 90 ALA ALA A . n A 1 68 ASN 68 91 91 ASN ASN A . n A 1 69 TYR 69 92 92 TYR TYR A . n A 1 70 GLY 70 93 93 GLY GLY A . n A 1 71 GLU 71 94 94 GLU GLU A . n A 1 72 ALA 72 95 95 ALA ALA A . n A 1 73 LEU 73 96 96 LEU LEU A . n A 1 74 VAL 74 97 97 VAL VAL A . n A 1 75 PHE 75 98 98 PHE PHE A . n A 1 76 PHE 76 99 99 PHE PHE A . n A 1 77 GLU 77 100 100 GLU GLU A . n A 1 78 LYS 78 101 101 LYS LYS A . n A 1 79 ALA 79 102 102 ALA ALA A . n A 1 80 LEU 80 103 103 LEU LEU A . n A 1 81 ASN 81 104 104 ASN ASN A . n A 1 82 LEU 82 105 105 LEU LEU A . n A 1 83 SER 83 106 106 SER SER A . n A 1 84 ASP 84 107 107 ASP ASP A . n A 1 85 ASN 85 108 108 ASN ASN A . n A 1 86 GLU 86 109 109 GLU GLU A . n A 1 87 GLU 87 110 110 GLU GLU A . n A 1 88 ILE 88 111 111 ILE ILE A . n A 1 89 LYS 89 112 112 LYS LYS A . n A 1 90 LYS 90 113 113 LYS LYS A . n A 1 91 ILE 91 114 114 ILE ILE A . n A 1 92 ALA 92 115 115 ALA ALA A . n A 1 93 SER 93 116 116 SER SER A . n A 1 94 PHE 94 117 117 PHE PHE A . n A 1 95 TYR 95 118 118 TYR TYR A . n A 1 96 LEU 96 119 119 LEU LEU A . n A 1 97 GLU 97 120 120 GLU GLU A . n A 1 98 GLU 98 121 121 GLU GLU A . n A 1 99 CYS 99 122 122 CYS CYS A . n A 1 100 ARG 100 123 123 ARG ARG A . n A 1 101 LYS 101 124 124 LYS LYS A . n A 1 102 LYS 102 125 125 LYS LYS A . n A 1 103 LEU 103 126 126 LEU LEU A . n A 1 104 ALA 104 127 127 ALA ALA A . n A 1 105 GLY 105 128 128 GLY GLY A . n A 1 106 ASP 106 129 129 ASP ASP A . n B 1 1 GLY 1 24 24 GLY GLY B . n B 1 2 SER 2 25 25 SER SER B . n B 1 3 HIS 3 26 26 HIS HIS B . n B 1 4 MET 4 27 27 MET MET B . n B 1 5 ASN 5 28 28 ASN ASN B . n B 1 6 LEU 6 29 29 LEU LEU B . n B 1 7 ALA 7 30 30 ALA ALA B . n B 1 8 VAL 8 31 31 VAL VAL B . n B 1 9 LYS 9 32 32 LYS LYS B . n B 1 10 LEU 10 33 33 LEU LEU B . n B 1 11 THR 11 34 34 THR THR B . n B 1 12 ARG 12 35 35 ARG ARG B . n B 1 13 MET 13 36 36 MET MET B . n B 1 14 GLU 14 37 37 GLU GLU B . n B 1 15 LYS 15 38 38 LYS LYS B . n B 1 16 THR 16 39 39 THR THR B . n B 1 17 LEU 17 40 40 LEU LEU B . n B 1 18 LYS 18 41 41 LYS LYS B . n B 1 19 ALA 19 42 42 ALA ALA B . n B 1 20 TYR 20 43 43 TYR TYR B . n B 1 21 GLU 21 44 44 GLU GLU B . n B 1 22 LEU 22 45 45 LEU LEU B . n B 1 23 TYR 23 46 46 TYR TYR B . n B 1 24 ILE 24 47 47 ILE ILE B . n B 1 25 PHE 25 48 48 PHE PHE B . n B 1 26 SER 26 49 49 SER SER B . n B 1 27 ASP 27 50 50 ASP ASP B . n B 1 28 TYR 28 51 51 TYR TYR B . n B 1 29 GLU 29 52 52 GLU GLU B . n B 1 30 ASN 30 53 53 ASN ASN B . n B 1 31 PHE 31 54 54 PHE PHE B . n B 1 32 GLU 32 55 55 GLU GLU B . n B 1 33 ASN 33 56 56 ASN ASN B . n B 1 34 TYR 34 57 57 TYR TYR B . n B 1 35 VAL 35 58 58 VAL VAL B . n B 1 36 LYS 36 59 59 LYS LYS B . n B 1 37 LYS 37 60 60 LYS LYS B . n B 1 38 GLU 38 61 61 GLU GLU B . n B 1 39 GLY 39 62 62 GLY GLY B . n B 1 40 LEU 40 63 63 LEU LEU B . n B 1 41 LYS 41 64 64 LYS LYS B . n B 1 42 ILE 42 65 65 ILE ILE B . n B 1 43 GLU 43 66 66 GLU GLU B . n B 1 44 GLY 44 67 67 GLY GLY B . n B 1 45 MET 45 68 68 MET MET B . n B 1 46 GLU 46 69 69 GLU GLU B . n B 1 47 LEU 47 70 70 LEU LEU B . n B 1 48 LEU 48 71 71 LEU LEU B . n B 1 49 LYS 49 72 72 LYS LYS B . n B 1 50 GLU 50 73 73 GLU GLU B . n B 1 51 LYS 51 74 74 LYS LYS B . n B 1 52 LYS 52 75 75 LYS LYS B . n B 1 53 ALA 53 76 76 ALA ALA B . n B 1 54 ARG 54 77 77 ARG ARG B . n B 1 55 SER 55 78 78 SER SER B . n B 1 56 LEU 56 79 79 LEU LEU B . n B 1 57 ILE 57 80 80 ILE ILE B . n B 1 58 ALA 58 81 81 ALA ALA B . n B 1 59 GLU 59 82 82 GLU GLU B . n B 1 60 GLY 60 83 83 GLY GLY B . n B 1 61 LYS 61 84 84 LYS LYS B . n B 1 62 ASP 62 85 85 ASP ASP B . n B 1 63 LEU 63 86 86 LEU LEU B . n B 1 64 PHE 64 87 87 PHE PHE B . n B 1 65 GLU 65 88 88 GLU GLU B . n B 1 66 THR 66 89 89 THR THR B . n B 1 67 ALA 67 90 90 ALA ALA B . n B 1 68 ASN 68 91 91 ASN ASN B . n B 1 69 TYR 69 92 92 TYR TYR B . n B 1 70 GLY 70 93 93 GLY GLY B . n B 1 71 GLU 71 94 94 GLU GLU B . n B 1 72 ALA 72 95 95 ALA ALA B . n B 1 73 LEU 73 96 96 LEU LEU B . n B 1 74 VAL 74 97 97 VAL VAL B . n B 1 75 PHE 75 98 98 PHE PHE B . n B 1 76 PHE 76 99 99 PHE PHE B . n B 1 77 GLU 77 100 100 GLU GLU B . n B 1 78 LYS 78 101 101 LYS LYS B . n B 1 79 ALA 79 102 102 ALA ALA B . n B 1 80 LEU 80 103 103 LEU LEU B . n B 1 81 ASN 81 104 104 ASN ASN B . n B 1 82 LEU 82 105 105 LEU LEU B . n B 1 83 SER 83 106 106 SER SER B . n B 1 84 ASP 84 107 107 ASP ASP B . n B 1 85 ASN 85 108 108 ASN ASN B . n B 1 86 GLU 86 109 109 GLU GLU B . n B 1 87 GLU 87 110 110 GLU GLU B . n B 1 88 ILE 88 111 111 ILE ILE B . n B 1 89 LYS 89 112 112 LYS LYS B . n B 1 90 LYS 90 113 113 LYS LYS B . n B 1 91 ILE 91 114 114 ILE ILE B . n B 1 92 ALA 92 115 115 ALA ALA B . n B 1 93 SER 93 116 116 SER SER B . n B 1 94 PHE 94 117 117 PHE PHE B . n B 1 95 TYR 95 118 118 TYR TYR B . n B 1 96 LEU 96 119 119 LEU LEU B . n B 1 97 GLU 97 120 120 GLU GLU B . n B 1 98 GLU 98 121 121 GLU GLU B . n B 1 99 CYS 99 122 122 CYS CYS B . n B 1 100 ARG 100 123 123 ARG ARG B . n B 1 101 LYS 101 124 124 LYS LYS B . n B 1 102 LYS 102 125 125 LYS LYS B . n B 1 103 LEU 103 126 126 LEU LEU B . n B 1 104 ALA 104 127 127 ALA ALA B . n B 1 105 GLY 105 128 128 GLY GLY B . n B 1 106 ASP 106 129 129 ASP ASP B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 1130 1130 SO4 SO4 A . D 2 SO4 1 1130 1130 SO4 SO4 B . E 2 SO4 1 1131 1131 SO4 SO4 B . F 3 HOH 1 2001 2001 HOH HOH A . F 3 HOH 2 2002 2002 HOH HOH A . F 3 HOH 3 2003 2003 HOH HOH A . F 3 HOH 4 2004 2004 HOH HOH A . F 3 HOH 5 2005 2005 HOH HOH A . F 3 HOH 6 2006 2006 HOH HOH A . F 3 HOH 7 2007 2007 HOH HOH A . F 3 HOH 8 2008 2008 HOH HOH A . F 3 HOH 9 2009 2009 HOH HOH A . F 3 HOH 10 2010 2010 HOH HOH A . F 3 HOH 11 2011 2011 HOH HOH A . F 3 HOH 12 2012 2012 HOH HOH A . F 3 HOH 13 2013 2013 HOH HOH A . F 3 HOH 14 2014 2014 HOH HOH A . F 3 HOH 15 2015 2015 HOH HOH A . F 3 HOH 16 2016 2016 HOH HOH A . F 3 HOH 17 2017 2017 HOH HOH A . F 3 HOH 18 2018 2018 HOH HOH A . F 3 HOH 19 2019 2019 HOH HOH A . F 3 HOH 20 2020 2020 HOH HOH A . F 3 HOH 21 2021 2021 HOH HOH A . F 3 HOH 22 2022 2022 HOH HOH A . F 3 HOH 23 2023 2023 HOH HOH A . F 3 HOH 24 2024 2024 HOH HOH A . F 3 HOH 25 2025 2025 HOH HOH A . F 3 HOH 26 2026 2026 HOH HOH A . F 3 HOH 27 2027 2027 HOH HOH A . F 3 HOH 28 2028 2028 HOH HOH A . F 3 HOH 29 2029 2029 HOH HOH A . F 3 HOH 30 2030 2030 HOH HOH A . F 3 HOH 31 2031 2031 HOH HOH A . F 3 HOH 32 2032 2032 HOH HOH A . F 3 HOH 33 2033 2033 HOH HOH A . F 3 HOH 34 2034 2034 HOH HOH A . F 3 HOH 35 2035 2035 HOH HOH A . F 3 HOH 36 2036 2036 HOH HOH A . F 3 HOH 37 2037 2037 HOH HOH A . F 3 HOH 38 2038 2038 HOH HOH A . F 3 HOH 39 2039 2039 HOH HOH A . F 3 HOH 40 2040 2040 HOH HOH A . F 3 HOH 41 2041 2041 HOH HOH A . F 3 HOH 42 2042 2042 HOH HOH A . F 3 HOH 43 2043 2043 HOH HOH A . F 3 HOH 44 2044 2044 HOH HOH A . F 3 HOH 45 2045 2045 HOH HOH A . F 3 HOH 46 2046 2046 HOH HOH A . F 3 HOH 47 2047 2047 HOH HOH A . F 3 HOH 48 2048 2048 HOH HOH A . F 3 HOH 49 2049 2049 HOH HOH A . F 3 HOH 50 2050 2050 HOH HOH A . F 3 HOH 51 2051 2051 HOH HOH A . F 3 HOH 52 2052 2052 HOH HOH A . F 3 HOH 53 2053 2053 HOH HOH A . F 3 HOH 54 2054 2054 HOH HOH A . F 3 HOH 55 2055 2055 HOH HOH A . F 3 HOH 56 2056 2056 HOH HOH A . F 3 HOH 57 2057 2057 HOH HOH A . F 3 HOH 58 2058 2058 HOH HOH A . F 3 HOH 59 2059 2059 HOH HOH A . F 3 HOH 60 2060 2060 HOH HOH A . F 3 HOH 61 2061 2061 HOH HOH A . F 3 HOH 62 2062 2062 HOH HOH A . F 3 HOH 63 2063 2063 HOH HOH A . F 3 HOH 64 2064 2064 HOH HOH A . F 3 HOH 65 2065 2065 HOH HOH A . F 3 HOH 66 2066 2066 HOH HOH A . F 3 HOH 67 2067 2067 HOH HOH A . F 3 HOH 68 2068 2068 HOH HOH A . F 3 HOH 69 2069 2069 HOH HOH A . F 3 HOH 70 2070 2070 HOH HOH A . F 3 HOH 71 2071 2071 HOH HOH A . F 3 HOH 72 2072 2072 HOH HOH A . F 3 HOH 73 2073 2073 HOH HOH A . F 3 HOH 74 2074 2074 HOH HOH A . F 3 HOH 75 2075 2075 HOH HOH A . F 3 HOH 76 2076 2076 HOH HOH A . F 3 HOH 77 2077 2077 HOH HOH A . F 3 HOH 78 2078 2078 HOH HOH A . F 3 HOH 79 2079 2079 HOH HOH A . F 3 HOH 80 2080 2080 HOH HOH A . F 3 HOH 81 2081 2081 HOH HOH A . F 3 HOH 82 2082 2082 HOH HOH A . F 3 HOH 83 2083 2083 HOH HOH A . F 3 HOH 84 2084 2084 HOH HOH A . F 3 HOH 85 2085 2085 HOH HOH A . F 3 HOH 86 2086 2086 HOH HOH A . F 3 HOH 87 2087 2087 HOH HOH A . F 3 HOH 88 2088 2088 HOH HOH A . F 3 HOH 89 2089 2089 HOH HOH A . F 3 HOH 90 2090 2090 HOH HOH A . F 3 HOH 91 2091 2091 HOH HOH A . F 3 HOH 92 2092 2092 HOH HOH A . F 3 HOH 93 2093 2093 HOH HOH A . F 3 HOH 94 2094 2094 HOH HOH A . F 3 HOH 95 2095 2095 HOH HOH A . F 3 HOH 96 2096 2096 HOH HOH A . F 3 HOH 97 2097 2097 HOH HOH A . F 3 HOH 98 2098 2098 HOH HOH A . F 3 HOH 99 2099 2099 HOH HOH A . F 3 HOH 100 2100 2100 HOH HOH A . G 3 HOH 1 2001 2001 HOH HOH B . G 3 HOH 2 2002 2002 HOH HOH B . G 3 HOH 3 2003 2003 HOH HOH B . G 3 HOH 4 2004 2004 HOH HOH B . G 3 HOH 5 2005 2005 HOH HOH B . G 3 HOH 6 2006 2006 HOH HOH B . G 3 HOH 7 2007 2007 HOH HOH B . G 3 HOH 8 2008 2008 HOH HOH B . G 3 HOH 9 2009 2009 HOH HOH B . G 3 HOH 10 2010 2010 HOH HOH B . G 3 HOH 11 2011 2011 HOH HOH B . G 3 HOH 12 2012 2012 HOH HOH B . G 3 HOH 13 2013 2013 HOH HOH B . G 3 HOH 14 2014 2014 HOH HOH B . G 3 HOH 15 2015 2015 HOH HOH B . G 3 HOH 16 2016 2016 HOH HOH B . G 3 HOH 17 2017 2017 HOH HOH B . G 3 HOH 18 2018 2018 HOH HOH B . G 3 HOH 19 2019 2019 HOH HOH B . G 3 HOH 20 2020 2020 HOH HOH B . G 3 HOH 21 2021 2021 HOH HOH B . G 3 HOH 22 2022 2022 HOH HOH B . G 3 HOH 23 2023 2023 HOH HOH B . G 3 HOH 24 2024 2024 HOH HOH B . G 3 HOH 25 2025 2025 HOH HOH B . G 3 HOH 26 2026 2026 HOH HOH B . G 3 HOH 27 2027 2027 HOH HOH B . G 3 HOH 28 2028 2028 HOH HOH B . G 3 HOH 29 2029 2029 HOH HOH B . G 3 HOH 30 2030 2030 HOH HOH B . G 3 HOH 31 2031 2031 HOH HOH B . G 3 HOH 32 2032 2032 HOH HOH B . G 3 HOH 33 2033 2033 HOH HOH B . G 3 HOH 34 2034 2034 HOH HOH B . G 3 HOH 35 2035 2035 HOH HOH B . G 3 HOH 36 2036 2036 HOH HOH B . G 3 HOH 37 2037 2037 HOH HOH B . G 3 HOH 38 2038 2038 HOH HOH B . G 3 HOH 39 2039 2039 HOH HOH B . G 3 HOH 40 2040 2040 HOH HOH B . G 3 HOH 41 2041 2041 HOH HOH B . G 3 HOH 42 2042 2042 HOH HOH B . G 3 HOH 43 2043 2043 HOH HOH B . G 3 HOH 44 2044 2044 HOH HOH B . G 3 HOH 45 2045 2045 HOH HOH B . G 3 HOH 46 2046 2046 HOH HOH B . G 3 HOH 47 2047 2047 HOH HOH B . G 3 HOH 48 2048 2048 HOH HOH B . G 3 HOH 49 2049 2049 HOH HOH B . G 3 HOH 50 2050 2050 HOH HOH B . G 3 HOH 51 2051 2051 HOH HOH B . G 3 HOH 52 2052 2052 HOH HOH B . G 3 HOH 53 2053 2053 HOH HOH B . G 3 HOH 54 2054 2054 HOH HOH B . G 3 HOH 55 2055 2055 HOH HOH B . G 3 HOH 56 2056 2056 HOH HOH B . G 3 HOH 57 2057 2057 HOH HOH B . G 3 HOH 58 2058 2058 HOH HOH B . G 3 HOH 59 2059 2059 HOH HOH B . G 3 HOH 60 2060 2060 HOH HOH B . G 3 HOH 61 2061 2061 HOH HOH B . G 3 HOH 62 2062 2062 HOH HOH B . G 3 HOH 63 2063 2063 HOH HOH B . G 3 HOH 64 2064 2064 HOH HOH B . G 3 HOH 65 2065 2065 HOH HOH B . G 3 HOH 66 2066 2066 HOH HOH B . G 3 HOH 67 2067 2067 HOH HOH B . G 3 HOH 68 2068 2068 HOH HOH B . G 3 HOH 69 2069 2069 HOH HOH B . G 3 HOH 70 2070 2070 HOH HOH B . G 3 HOH 71 2071 2071 HOH HOH B . G 3 HOH 72 2072 2072 HOH HOH B . G 3 HOH 73 2073 2073 HOH HOH B . G 3 HOH 74 2074 2074 HOH HOH B . G 3 HOH 75 2075 2075 HOH HOH B . G 3 HOH 76 2076 2076 HOH HOH B . G 3 HOH 77 2077 2077 HOH HOH B . G 3 HOH 78 2078 2078 HOH HOH B . G 3 HOH 79 2079 2079 HOH HOH B . G 3 HOH 80 2080 2080 HOH HOH B . G 3 HOH 81 2081 2081 HOH HOH B . G 3 HOH 82 2082 2082 HOH HOH B . G 3 HOH 83 2083 2083 HOH HOH B . G 3 HOH 84 2084 2084 HOH HOH B . G 3 HOH 85 2085 2085 HOH HOH B . G 3 HOH 86 2086 2086 HOH HOH B . G 3 HOH 87 2087 2087 HOH HOH B . G 3 HOH 88 2088 2088 HOH HOH B . G 3 HOH 89 2089 2089 HOH HOH B . G 3 HOH 90 2090 2090 HOH HOH B . G 3 HOH 91 2091 2091 HOH HOH B . G 3 HOH 92 2092 2092 HOH HOH B . G 3 HOH 93 2093 2093 HOH HOH B . G 3 HOH 94 2094 2094 HOH HOH B . G 3 HOH 95 2095 2095 HOH HOH B . G 3 HOH 96 2096 2096 HOH HOH B . G 3 HOH 97 2097 2097 HOH HOH B . G 3 HOH 98 2098 2098 HOH HOH B . G 3 HOH 99 2099 2099 HOH HOH B . G 3 HOH 100 2100 2100 HOH HOH B . G 3 HOH 101 2101 2101 HOH HOH B . G 3 HOH 102 2102 2102 HOH HOH B . G 3 HOH 103 2103 2103 HOH HOH B . G 3 HOH 104 2104 2104 HOH HOH B . G 3 HOH 105 2105 2105 HOH HOH B . G 3 HOH 106 2106 2106 HOH HOH B . G 3 HOH 107 2107 2107 HOH HOH B . G 3 HOH 108 2108 2108 HOH HOH B . G 3 HOH 109 2109 2109 HOH HOH B . G 3 HOH 110 2110 2110 HOH HOH B . G 3 HOH 111 2111 2111 HOH HOH B . G 3 HOH 112 2112 2112 HOH HOH B . G 3 HOH 113 2113 2113 HOH HOH B . G 3 HOH 114 2114 2114 HOH HOH B . G 3 HOH 115 2115 2115 HOH HOH B . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 0 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id LEU _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 40 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id CD1 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id LEU _pdbx_unobs_or_zero_occ_atoms.label_seq_id 17 _pdbx_unobs_or_zero_occ_atoms.label_atom_id CD1 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2VKJ _cell.length_a 68.229 _cell.length_b 76.199 _cell.length_c 46.230 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VKJ _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 # _exptl.entry_id 2VKJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 47 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '30% PEG400, 0.2 M LI2SO4, 0.1 M NACACODYLATE, PH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2006-04-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.1 _diffrn_source.pdbx_wavelength 1 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VKJ _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.65 _reflns.number_obs 27259 _reflns.number_all ? _reflns.percent_possible_obs 96.6 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 29.00 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 88.0 _reflns_shell.Rmerge_I_obs 0.35 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.90 _reflns_shell.pdbx_redundancy ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VKJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 27259 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.83 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 96.7 _refine.ls_R_factor_obs 0.205 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.203 _refine.ls_R_factor_R_free 0.229 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1453 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.949 _refine.B_iso_mean 27.70 _refine.aniso_B[1][1] 2.06000 _refine.aniso_B[2][2] -0.75000 _refine.aniso_B[3][3] -1.31000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. CHAIN A AND CHAIN B SHOW DIFFERENT CONFORMATIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.110 _refine.pdbx_overall_ESU_R_Free 0.104 _refine.overall_SU_ML 0.075 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.208 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1726 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 215 _refine_hist.number_atoms_total 1956 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 50.83 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 1761 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.379 2.001 ? 2346 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.070 5.000 ? 210 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.344 25.476 ? 84 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.714 15.000 ? 366 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.488 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.106 0.200 ? 249 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1270 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.214 0.200 ? 936 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.313 0.200 ? 1243 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.137 0.200 ? 186 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.221 0.200 ? 70 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.190 0.200 ? 24 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.025 1.500 ? 1056 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.480 2.000 ? 1658 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.902 3.000 ? 769 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 4.592 4.500 ? 688 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.65 _refine_ls_shell.d_res_low 1.69 _refine_ls_shell.number_reflns_R_work 1708 _refine_ls_shell.R_factor_R_work 0.2570 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2VKJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2VKJ _struct.title 'Structure of the soluble domain of the membrane protein TM1634 from Thermotoga maritima' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VKJ _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'MEMBRANE PROTEIN, TPR MOTIF JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, STRUCTURAL GENOMICS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9X1W9_THEMA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9X1W9 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VKJ A 5 ? 106 ? Q9X1W9 27 ? 128 ? 28 129 2 1 2VKJ B 5 ? 106 ? Q9X1W9 27 ? 128 ? 28 129 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2VKJ GLY A 1 ? UNP Q9X1W9 ? ? 'expression tag' 24 1 1 2VKJ SER A 2 ? UNP Q9X1W9 ? ? 'expression tag' 25 2 1 2VKJ HIS A 3 ? UNP Q9X1W9 ? ? 'expression tag' 26 3 1 2VKJ MET A 4 ? UNP Q9X1W9 ? ? 'expression tag' 27 4 2 2VKJ GLY B 1 ? UNP Q9X1W9 ? ? 'expression tag' 24 5 2 2VKJ SER B 2 ? UNP Q9X1W9 ? ? 'expression tag' 25 6 2 2VKJ HIS B 3 ? UNP Q9X1W9 ? ? 'expression tag' 26 7 2 2VKJ MET B 4 ? UNP Q9X1W9 ? ? 'expression tag' 27 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3060 ? 1 MORE -64.4 ? 1 'SSA (A^2)' 12320 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 3 ? SER A 26 ? HIS A 26 SER A 49 1 ? 24 HELX_P HELX_P2 2 ASP A 27 ? GLY A 39 ? ASP A 50 GLY A 62 1 ? 13 HELX_P HELX_P3 3 GLY A 44 ? THR A 66 ? GLY A 67 THR A 89 1 ? 23 HELX_P HELX_P4 4 ASN A 68 ? SER A 83 ? ASN A 91 SER A 106 1 ? 16 HELX_P HELX_P5 5 ASN A 85 ? GLY A 105 ? ASN A 108 GLY A 128 1 ? 21 HELX_P HELX_P6 6 LEU B 6 ? SER B 26 ? LEU B 29 SER B 49 1 ? 21 HELX_P HELX_P7 7 ASP B 27 ? GLY B 39 ? ASP B 50 GLY B 62 1 ? 13 HELX_P HELX_P8 8 GLY B 44 ? THR B 66 ? GLY B 67 THR B 89 1 ? 23 HELX_P HELX_P9 9 ASN B 68 ? SER B 83 ? ASN B 91 SER B 106 1 ? 16 HELX_P HELX_P10 10 ASN B 85 ? ALA B 104 ? ASN B 108 ALA B 127 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 1 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 24 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 2 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 25 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 28.73 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE SO4 B1130' AC2 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE SO4 B1131' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A1130' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 SER A 2 ? SER A 25 . ? 1_555 ? 2 AC1 9 HIS A 3 ? HIS A 26 . ? 1_555 ? 3 AC1 9 HIS B 3 ? HIS B 26 . ? 1_555 ? 4 AC1 9 MET B 4 ? MET B 27 . ? 1_555 ? 5 AC1 9 ASN B 5 ? ASN B 28 . ? 1_555 ? 6 AC1 9 HOH G . ? HOH B 2110 . ? 1_555 ? 7 AC1 9 HOH G . ? HOH B 2111 . ? 1_555 ? 8 AC1 9 HOH G . ? HOH B 2112 . ? 1_555 ? 9 AC1 9 HOH G . ? HOH B 2113 . ? 1_555 ? 10 AC2 11 GLY B 1 ? GLY B 24 . ? 1_555 ? 11 AC2 11 SER B 2 ? SER B 25 . ? 1_555 ? 12 AC2 11 HIS B 3 ? HIS B 26 . ? 1_555 ? 13 AC2 11 ASP B 27 ? ASP B 50 . ? 1_555 ? 14 AC2 11 TYR B 28 ? TYR B 51 . ? 1_555 ? 15 AC2 11 GLU B 29 ? GLU B 52 . ? 1_555 ? 16 AC2 11 LYS B 52 ? LYS B 75 . ? 1_555 ? 17 AC2 11 HOH G . ? HOH B 2002 . ? 1_555 ? 18 AC2 11 HOH G . ? HOH B 2007 . ? 1_555 ? 19 AC2 11 HOH G . ? HOH B 2114 . ? 1_555 ? 20 AC2 11 HOH G . ? HOH B 2115 . ? 1_555 ? 21 AC3 6 SER A 2 ? SER A 25 . ? 1_555 ? 22 AC3 6 LYS A 51 ? LYS A 74 . ? 1_555 ? 23 AC3 6 ARG A 54 ? ARG A 77 . ? 1_555 ? 24 AC3 6 HOH F . ? HOH A 2099 . ? 1_555 ? 25 AC3 6 HOH F . ? HOH A 2100 . ? 1_555 ? 26 AC3 6 SER B 2 ? SER B 25 . ? 1_555 ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 17.4743 3.2998 5.8121 -0.0899 0.0115 -0.0102 0.0083 0.0062 0.0051 0.0016 0.9408 2.2844 0.0385 -0.0380 -0.9268 0.0056 0.0745 -0.0307 -0.0142 0.0257 0.0684 0.0160 -0.1917 -0.0313 'X-RAY DIFFRACTION' 2 ? refined 30.7139 15.9003 4.5457 -0.0811 -0.0246 -0.0074 0.0211 0.0216 0.0027 0.1941 0.4615 1.6019 -0.1002 0.2168 -0.0037 0.0182 0.0164 0.0482 -0.0115 -0.0001 -0.0495 -0.1324 0.0651 -0.0181 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 B 24 ? ? B 49 ? ? ? ? 'X-RAY DIFFRACTION' 2 1 B 50 ? ? B 64 ? ? ? ? 'X-RAY DIFFRACTION' 3 1 B 65 ? ? B 90 ? ? ? ? 'X-RAY DIFFRACTION' 4 1 B 91 ? ? B 106 ? ? ? ? 'X-RAY DIFFRACTION' 5 1 B 107 ? ? B 129 ? ? ? ? 'X-RAY DIFFRACTION' 6 2 A 24 ? ? A 49 ? ? ? ? 'X-RAY DIFFRACTION' 7 2 A 50 ? ? A 64 ? ? ? ? 'X-RAY DIFFRACTION' 8 2 A 65 ? ? A 90 ? ? ? ? 'X-RAY DIFFRACTION' 9 2 A 91 ? ? A 106 ? ? ? ? 'X-RAY DIFFRACTION' 10 2 A 107 ? ? A 129 ? ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLU N N N N 88 GLU CA C N S 89 GLU C C N N 90 GLU O O N N 91 GLU CB C N N 92 GLU CG C N N 93 GLU CD C N N 94 GLU OE1 O N N 95 GLU OE2 O N N 96 GLU OXT O N N 97 GLU H H N N 98 GLU H2 H N N 99 GLU HA H N N 100 GLU HB2 H N N 101 GLU HB3 H N N 102 GLU HG2 H N N 103 GLU HG3 H N N 104 GLU HE2 H N N 105 GLU HXT H N N 106 GLY N N N N 107 GLY CA C N N 108 GLY C C N N 109 GLY O O N N 110 GLY OXT O N N 111 GLY H H N N 112 GLY H2 H N N 113 GLY HA2 H N N 114 GLY HA3 H N N 115 GLY HXT H N N 116 HIS N N N N 117 HIS CA C N S 118 HIS C C N N 119 HIS O O N N 120 HIS CB C N N 121 HIS CG C Y N 122 HIS ND1 N Y N 123 HIS CD2 C Y N 124 HIS CE1 C Y N 125 HIS NE2 N Y N 126 HIS OXT O N N 127 HIS H H N N 128 HIS H2 H N N 129 HIS HA H N N 130 HIS HB2 H N N 131 HIS HB3 H N N 132 HIS HD1 H N N 133 HIS HD2 H N N 134 HIS HE1 H N N 135 HIS HE2 H N N 136 HIS HXT H N N 137 HOH O O N N 138 HOH H1 H N N 139 HOH H2 H N N 140 ILE N N N N 141 ILE CA C N S 142 ILE C C N N 143 ILE O O N N 144 ILE CB C N S 145 ILE CG1 C N N 146 ILE CG2 C N N 147 ILE CD1 C N N 148 ILE OXT O N N 149 ILE H H N N 150 ILE H2 H N N 151 ILE HA H N N 152 ILE HB H N N 153 ILE HG12 H N N 154 ILE HG13 H N N 155 ILE HG21 H N N 156 ILE HG22 H N N 157 ILE HG23 H N N 158 ILE HD11 H N N 159 ILE HD12 H N N 160 ILE HD13 H N N 161 ILE HXT H N N 162 LEU N N N N 163 LEU CA C N S 164 LEU C C N N 165 LEU O O N N 166 LEU CB C N N 167 LEU CG C N N 168 LEU CD1 C N N 169 LEU CD2 C N N 170 LEU OXT O N N 171 LEU H H N N 172 LEU H2 H N N 173 LEU HA H N N 174 LEU HB2 H N N 175 LEU HB3 H N N 176 LEU HG H N N 177 LEU HD11 H N N 178 LEU HD12 H N N 179 LEU HD13 H N N 180 LEU HD21 H N N 181 LEU HD22 H N N 182 LEU HD23 H N N 183 LEU HXT H N N 184 LYS N N N N 185 LYS CA C N S 186 LYS C C N N 187 LYS O O N N 188 LYS CB C N N 189 LYS CG C N N 190 LYS CD C N N 191 LYS CE C N N 192 LYS NZ N N N 193 LYS OXT O N N 194 LYS H H N N 195 LYS H2 H N N 196 LYS HA H N N 197 LYS HB2 H N N 198 LYS HB3 H N N 199 LYS HG2 H N N 200 LYS HG3 H N N 201 LYS HD2 H N N 202 LYS HD3 H N N 203 LYS HE2 H N N 204 LYS HE3 H N N 205 LYS HZ1 H N N 206 LYS HZ2 H N N 207 LYS HZ3 H N N 208 LYS HXT H N N 209 MET N N N N 210 MET CA C N S 211 MET C C N N 212 MET O O N N 213 MET CB C N N 214 MET CG C N N 215 MET SD S N N 216 MET CE C N N 217 MET OXT O N N 218 MET H H N N 219 MET H2 H N N 220 MET HA H N N 221 MET HB2 H N N 222 MET HB3 H N N 223 MET HG2 H N N 224 MET HG3 H N N 225 MET HE1 H N N 226 MET HE2 H N N 227 MET HE3 H N N 228 MET HXT H N N 229 PHE N N N N 230 PHE CA C N S 231 PHE C C N N 232 PHE O O N N 233 PHE CB C N N 234 PHE CG C Y N 235 PHE CD1 C Y N 236 PHE CD2 C Y N 237 PHE CE1 C Y N 238 PHE CE2 C Y N 239 PHE CZ C Y N 240 PHE OXT O N N 241 PHE H H N N 242 PHE H2 H N N 243 PHE HA H N N 244 PHE HB2 H N N 245 PHE HB3 H N N 246 PHE HD1 H N N 247 PHE HD2 H N N 248 PHE HE1 H N N 249 PHE HE2 H N N 250 PHE HZ H N N 251 PHE HXT H N N 252 SER N N N N 253 SER CA C N S 254 SER C C N N 255 SER O O N N 256 SER CB C N N 257 SER OG O N N 258 SER OXT O N N 259 SER H H N N 260 SER H2 H N N 261 SER HA H N N 262 SER HB2 H N N 263 SER HB3 H N N 264 SER HG H N N 265 SER HXT H N N 266 SO4 S S N N 267 SO4 O1 O N N 268 SO4 O2 O N N 269 SO4 O3 O N N 270 SO4 O4 O N N 271 THR N N N N 272 THR CA C N S 273 THR C C N N 274 THR O O N N 275 THR CB C N R 276 THR OG1 O N N 277 THR CG2 C N N 278 THR OXT O N N 279 THR H H N N 280 THR H2 H N N 281 THR HA H N N 282 THR HB H N N 283 THR HG1 H N N 284 THR HG21 H N N 285 THR HG22 H N N 286 THR HG23 H N N 287 THR HXT H N N 288 TYR N N N N 289 TYR CA C N S 290 TYR C C N N 291 TYR O O N N 292 TYR CB C N N 293 TYR CG C Y N 294 TYR CD1 C Y N 295 TYR CD2 C Y N 296 TYR CE1 C Y N 297 TYR CE2 C Y N 298 TYR CZ C Y N 299 TYR OH O N N 300 TYR OXT O N N 301 TYR H H N N 302 TYR H2 H N N 303 TYR HA H N N 304 TYR HB2 H N N 305 TYR HB3 H N N 306 TYR HD1 H N N 307 TYR HD2 H N N 308 TYR HE1 H N N 309 TYR HE2 H N N 310 TYR HH H N N 311 TYR HXT H N N 312 VAL N N N N 313 VAL CA C N S 314 VAL C C N N 315 VAL O O N N 316 VAL CB C N N 317 VAL CG1 C N N 318 VAL CG2 C N N 319 VAL OXT O N N 320 VAL H H N N 321 VAL H2 H N N 322 VAL HA H N N 323 VAL HB H N N 324 VAL HG11 H N N 325 VAL HG12 H N N 326 VAL HG13 H N N 327 VAL HG21 H N N 328 VAL HG22 H N N 329 VAL HG23 H N N 330 VAL HXT H N N 331 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLU N CA sing N N 83 GLU N H sing N N 84 GLU N H2 sing N N 85 GLU CA C sing N N 86 GLU CA CB sing N N 87 GLU CA HA sing N N 88 GLU C O doub N N 89 GLU C OXT sing N N 90 GLU CB CG sing N N 91 GLU CB HB2 sing N N 92 GLU CB HB3 sing N N 93 GLU CG CD sing N N 94 GLU CG HG2 sing N N 95 GLU CG HG3 sing N N 96 GLU CD OE1 doub N N 97 GLU CD OE2 sing N N 98 GLU OE2 HE2 sing N N 99 GLU OXT HXT sing N N 100 GLY N CA sing N N 101 GLY N H sing N N 102 GLY N H2 sing N N 103 GLY CA C sing N N 104 GLY CA HA2 sing N N 105 GLY CA HA3 sing N N 106 GLY C O doub N N 107 GLY C OXT sing N N 108 GLY OXT HXT sing N N 109 HIS N CA sing N N 110 HIS N H sing N N 111 HIS N H2 sing N N 112 HIS CA C sing N N 113 HIS CA CB sing N N 114 HIS CA HA sing N N 115 HIS C O doub N N 116 HIS C OXT sing N N 117 HIS CB CG sing N N 118 HIS CB HB2 sing N N 119 HIS CB HB3 sing N N 120 HIS CG ND1 sing Y N 121 HIS CG CD2 doub Y N 122 HIS ND1 CE1 doub Y N 123 HIS ND1 HD1 sing N N 124 HIS CD2 NE2 sing Y N 125 HIS CD2 HD2 sing N N 126 HIS CE1 NE2 sing Y N 127 HIS CE1 HE1 sing N N 128 HIS NE2 HE2 sing N N 129 HIS OXT HXT sing N N 130 HOH O H1 sing N N 131 HOH O H2 sing N N 132 ILE N CA sing N N 133 ILE N H sing N N 134 ILE N H2 sing N N 135 ILE CA C sing N N 136 ILE CA CB sing N N 137 ILE CA HA sing N N 138 ILE C O doub N N 139 ILE C OXT sing N N 140 ILE CB CG1 sing N N 141 ILE CB CG2 sing N N 142 ILE CB HB sing N N 143 ILE CG1 CD1 sing N N 144 ILE CG1 HG12 sing N N 145 ILE CG1 HG13 sing N N 146 ILE CG2 HG21 sing N N 147 ILE CG2 HG22 sing N N 148 ILE CG2 HG23 sing N N 149 ILE CD1 HD11 sing N N 150 ILE CD1 HD12 sing N N 151 ILE CD1 HD13 sing N N 152 ILE OXT HXT sing N N 153 LEU N CA sing N N 154 LEU N H sing N N 155 LEU N H2 sing N N 156 LEU CA C sing N N 157 LEU CA CB sing N N 158 LEU CA HA sing N N 159 LEU C O doub N N 160 LEU C OXT sing N N 161 LEU CB CG sing N N 162 LEU CB HB2 sing N N 163 LEU CB HB3 sing N N 164 LEU CG CD1 sing N N 165 LEU CG CD2 sing N N 166 LEU CG HG sing N N 167 LEU CD1 HD11 sing N N 168 LEU CD1 HD12 sing N N 169 LEU CD1 HD13 sing N N 170 LEU CD2 HD21 sing N N 171 LEU CD2 HD22 sing N N 172 LEU CD2 HD23 sing N N 173 LEU OXT HXT sing N N 174 LYS N CA sing N N 175 LYS N H sing N N 176 LYS N H2 sing N N 177 LYS CA C sing N N 178 LYS CA CB sing N N 179 LYS CA HA sing N N 180 LYS C O doub N N 181 LYS C OXT sing N N 182 LYS CB CG sing N N 183 LYS CB HB2 sing N N 184 LYS CB HB3 sing N N 185 LYS CG CD sing N N 186 LYS CG HG2 sing N N 187 LYS CG HG3 sing N N 188 LYS CD CE sing N N 189 LYS CD HD2 sing N N 190 LYS CD HD3 sing N N 191 LYS CE NZ sing N N 192 LYS CE HE2 sing N N 193 LYS CE HE3 sing N N 194 LYS NZ HZ1 sing N N 195 LYS NZ HZ2 sing N N 196 LYS NZ HZ3 sing N N 197 LYS OXT HXT sing N N 198 MET N CA sing N N 199 MET N H sing N N 200 MET N H2 sing N N 201 MET CA C sing N N 202 MET CA CB sing N N 203 MET CA HA sing N N 204 MET C O doub N N 205 MET C OXT sing N N 206 MET CB CG sing N N 207 MET CB HB2 sing N N 208 MET CB HB3 sing N N 209 MET CG SD sing N N 210 MET CG HG2 sing N N 211 MET CG HG3 sing N N 212 MET SD CE sing N N 213 MET CE HE1 sing N N 214 MET CE HE2 sing N N 215 MET CE HE3 sing N N 216 MET OXT HXT sing N N 217 PHE N CA sing N N 218 PHE N H sing N N 219 PHE N H2 sing N N 220 PHE CA C sing N N 221 PHE CA CB sing N N 222 PHE CA HA sing N N 223 PHE C O doub N N 224 PHE C OXT sing N N 225 PHE CB CG sing N N 226 PHE CB HB2 sing N N 227 PHE CB HB3 sing N N 228 PHE CG CD1 doub Y N 229 PHE CG CD2 sing Y N 230 PHE CD1 CE1 sing Y N 231 PHE CD1 HD1 sing N N 232 PHE CD2 CE2 doub Y N 233 PHE CD2 HD2 sing N N 234 PHE CE1 CZ doub Y N 235 PHE CE1 HE1 sing N N 236 PHE CE2 CZ sing Y N 237 PHE CE2 HE2 sing N N 238 PHE CZ HZ sing N N 239 PHE OXT HXT sing N N 240 SER N CA sing N N 241 SER N H sing N N 242 SER N H2 sing N N 243 SER CA C sing N N 244 SER CA CB sing N N 245 SER CA HA sing N N 246 SER C O doub N N 247 SER C OXT sing N N 248 SER CB OG sing N N 249 SER CB HB2 sing N N 250 SER CB HB3 sing N N 251 SER OG HG sing N N 252 SER OXT HXT sing N N 253 SO4 S O1 doub N N 254 SO4 S O2 doub N N 255 SO4 S O3 sing N N 256 SO4 S O4 sing N N 257 THR N CA sing N N 258 THR N H sing N N 259 THR N H2 sing N N 260 THR CA C sing N N 261 THR CA CB sing N N 262 THR CA HA sing N N 263 THR C O doub N N 264 THR C OXT sing N N 265 THR CB OG1 sing N N 266 THR CB CG2 sing N N 267 THR CB HB sing N N 268 THR OG1 HG1 sing N N 269 THR CG2 HG21 sing N N 270 THR CG2 HG22 sing N N 271 THR CG2 HG23 sing N N 272 THR OXT HXT sing N N 273 TYR N CA sing N N 274 TYR N H sing N N 275 TYR N H2 sing N N 276 TYR CA C sing N N 277 TYR CA CB sing N N 278 TYR CA HA sing N N 279 TYR C O doub N N 280 TYR C OXT sing N N 281 TYR CB CG sing N N 282 TYR CB HB2 sing N N 283 TYR CB HB3 sing N N 284 TYR CG CD1 doub Y N 285 TYR CG CD2 sing Y N 286 TYR CD1 CE1 sing Y N 287 TYR CD1 HD1 sing N N 288 TYR CD2 CE2 doub Y N 289 TYR CD2 HD2 sing N N 290 TYR CE1 CZ doub Y N 291 TYR CE1 HE1 sing N N 292 TYR CE2 CZ sing Y N 293 TYR CE2 HE2 sing N N 294 TYR CZ OH sing N N 295 TYR OH HH sing N N 296 TYR OXT HXT sing N N 297 VAL N CA sing N N 298 VAL N H sing N N 299 VAL N H2 sing N N 300 VAL CA C sing N N 301 VAL CA CB sing N N 302 VAL CA HA sing N N 303 VAL C O doub N N 304 VAL C OXT sing N N 305 VAL CB CG1 sing N N 306 VAL CB CG2 sing N N 307 VAL CB HB sing N N 308 VAL CG1 HG11 sing N N 309 VAL CG1 HG12 sing N N 310 VAL CG1 HG13 sing N N 311 VAL CG2 HG21 sing N N 312 VAL CG2 HG22 sing N N 313 VAL CG2 HG23 sing N N 314 VAL OXT HXT sing N N 315 # _atom_sites.entry_id 2VKJ _atom_sites.fract_transf_matrix[1][1] 0.014657 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013124 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021631 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_