data_2VKP # _entry.id 2VKP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2VKP PDBE EBI-34850 WWPDB D_1290034850 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VKP _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-12-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cooper, C.D.O.' 1 ? 'Pike, A.C.W.' 2 ? 'Salah, E.' 3 ? 'Filippakopoulos, P.' 4 ? 'Bunkoczi, G.' 5 ? 'Elkins, J.M.' 6 ? 'von Delft, F.' 7 ? 'Gileadi, O.' 8 ? 'Edwards, A.' 9 ? 'Weigelt, J.' 10 ? 'Arrowsmith, C.H.' 11 ? 'Knapp, S.' 12 ? # _citation.id primary _citation.title 'Crystal Structure of Btb Domain from Btbd6' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cooper, C.D.O.' 1 primary 'Pike, A.C.W.' 2 primary 'Salah, E.' 3 primary 'Filippakopoulos, P.' 4 primary 'Bunkoczi, G.' 5 primary 'Elkins, J.M.' 6 primary 'von Delft, F.' 7 primary 'Gileadi, O.' 8 primary 'Edwards, A.' 9 primary 'Weigelt, J.' 10 primary 'Arrowsmith, C.H.' 11 primary 'Knapp, S.' 12 # _cell.entry_id 2VKP _cell.length_a 58.135 _cell.length_b 58.135 _cell.length_c 332.456 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VKP _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BTB/POZ DOMAIN-CONTAINING PROTEIN 6' 12160.424 2 ? ? 'BTB DOMAIN, RESIDUES 2-108' ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 174 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LENS BTB DOMAIN PROTEIN, BTB DOMAIN PROTEIN BTBD6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;S(MSE)FNNEL(MSE)ADVHFVVGPPGATRTVPAHKYVLAVGSSVFYA(MSE)FYGDLAEVKSEIHIPDVEPAAFLILLK Y(MSE)YSDEIDLEADTVLATLYAAKKYIVPALAKACVNFLETSL ; _entity_poly.pdbx_seq_one_letter_code_can ;SMFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEAD TVLATLYAAKKYIVPALAKACVNFLETSL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MSE n 1 3 PHE n 1 4 ASN n 1 5 ASN n 1 6 GLU n 1 7 LEU n 1 8 MSE n 1 9 ALA n 1 10 ASP n 1 11 VAL n 1 12 HIS n 1 13 PHE n 1 14 VAL n 1 15 VAL n 1 16 GLY n 1 17 PRO n 1 18 PRO n 1 19 GLY n 1 20 ALA n 1 21 THR n 1 22 ARG n 1 23 THR n 1 24 VAL n 1 25 PRO n 1 26 ALA n 1 27 HIS n 1 28 LYS n 1 29 TYR n 1 30 VAL n 1 31 LEU n 1 32 ALA n 1 33 VAL n 1 34 GLY n 1 35 SER n 1 36 SER n 1 37 VAL n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 MSE n 1 42 PHE n 1 43 TYR n 1 44 GLY n 1 45 ASP n 1 46 LEU n 1 47 ALA n 1 48 GLU n 1 49 VAL n 1 50 LYS n 1 51 SER n 1 52 GLU n 1 53 ILE n 1 54 HIS n 1 55 ILE n 1 56 PRO n 1 57 ASP n 1 58 VAL n 1 59 GLU n 1 60 PRO n 1 61 ALA n 1 62 ALA n 1 63 PHE n 1 64 LEU n 1 65 ILE n 1 66 LEU n 1 67 LEU n 1 68 LYS n 1 69 TYR n 1 70 MSE n 1 71 TYR n 1 72 SER n 1 73 ASP n 1 74 GLU n 1 75 ILE n 1 76 ASP n 1 77 LEU n 1 78 GLU n 1 79 ALA n 1 80 ASP n 1 81 THR n 1 82 VAL n 1 83 LEU n 1 84 ALA n 1 85 THR n 1 86 LEU n 1 87 TYR n 1 88 ALA n 1 89 ALA n 1 90 LYS n 1 91 LYS n 1 92 TYR n 1 93 ILE n 1 94 VAL n 1 95 PRO n 1 96 ALA n 1 97 LEU n 1 98 ALA n 1 99 LYS n 1 100 ALA n 1 101 CYS n 1 102 VAL n 1 103 ASN n 1 104 PHE n 1 105 LEU n 1 106 GLU n 1 107 THR n 1 108 SER n 1 109 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant R3-PRARE2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PNIC28-BSA4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BTBD6_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q96KE9 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VKP A 2 ? 109 ? Q96KE9 1 ? 108 ? 1 108 2 1 2VKP B 2 ? 109 ? Q96KE9 1 ? 108 ? 1 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2VKP SER A 1 ? UNP Q96KE9 ? ? 'expression tag' 0 1 2 2VKP SER B 1 ? UNP Q96KE9 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VKP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.38 _exptl_crystal.density_percent_sol 64 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.8M POTASSIUM CITRATE, 0.1M SODIUM CACODYLATE PH6.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2007-10-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.98248 1.0 2 0.97874 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.98248, 0.97874' # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VKP _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.90 _reflns.number_obs 27754 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.80 _reflns.B_iso_Wilson_estimate 27.91 _reflns.pdbx_redundancy 6.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.86 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.80 _reflns_shell.pdbx_redundancy 6.6 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VKP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 26222 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.07 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.196 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.234 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1403 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 18.30 _refine.aniso_B[1][1] 1.60000 _refine.aniso_B[2][2] 1.60000 _refine.aniso_B[3][3] -2.39000 _refine.aniso_B[1][2] 0.80000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.116 _refine.pdbx_overall_ESU_R_Free 0.119 _refine.overall_SU_ML 0.098 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1625 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 174 _refine_hist.number_atoms_total 1804 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 43.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 1673 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1060 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.361 1.975 ? 2284 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.889 3.000 ? 2610 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.220 5.000 ? 209 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 28.405 24.098 ? 61 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.727 15.000 ? 254 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.891 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.079 0.200 ? 273 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 1833 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 333 'X-RAY DIFFRACTION' ? r_nbd_refined 0.214 0.200 ? 354 'X-RAY DIFFRACTION' ? r_nbd_other 0.237 0.200 ? 923 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.190 0.200 ? 869 'X-RAY DIFFRACTION' ? r_nbtor_other 0.116 0.200 ? 718 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.185 0.200 ? 134 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.230 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.216 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.205 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 3.662 3.000 ? 1066 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 4.796 5.000 ? 1725 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 6.877 8.000 ? 607 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 8.732 11.000 ? 559 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.95 _refine_ls_shell.number_reflns_R_work 1907 _refine_ls_shell.R_factor_R_work 0.2520 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2460 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 83 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.874000 _struct_ncs_oper.matrix[1][2] -0.486000 _struct_ncs_oper.matrix[1][3] 0.027000 _struct_ncs_oper.matrix[2][1] -0.486000 _struct_ncs_oper.matrix[2][2] 0.873000 _struct_ncs_oper.matrix[2][3] -0.023000 _struct_ncs_oper.matrix[3][1] -0.012000 _struct_ncs_oper.matrix[3][2] -0.033000 _struct_ncs_oper.matrix[3][3] -0.999000 _struct_ncs_oper.vector[1] 77.49804 _struct_ncs_oper.vector[2] 20.90195 _struct_ncs_oper.vector[3] 41.86135 # _struct.entry_id 2VKP _struct.title 'Crystal structure of BTB domain from BTBD6' _struct.pdbx_descriptor 'BTB/POZ DOMAIN-CONTAINING PROTEIN 6' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VKP _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'PROTEIN-BINDING, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 27 ? SER A 35 ? HIS A 26 SER A 34 1 ? 9 HELX_P HELX_P2 2 SER A 35 ? TYR A 43 ? SER A 34 TYR A 42 1 ? 9 HELX_P HELX_P3 3 GLU A 59 ? ASP A 73 ? GLU A 58 ASP A 72 1 ? 15 HELX_P HELX_P4 4 THR A 81 ? TYR A 92 ? THR A 80 TYR A 91 1 ? 12 HELX_P HELX_P5 5 VAL A 94 ? LEU A 109 ? VAL A 93 LEU A 108 1 ? 16 HELX_P HELX_P6 6 HIS B 27 ? SER B 35 ? HIS B 26 SER B 34 1 ? 9 HELX_P HELX_P7 7 SER B 35 ? TYR B 43 ? SER B 34 TYR B 42 1 ? 9 HELX_P HELX_P8 8 GLU B 59 ? ASP B 73 ? GLU B 58 ASP B 72 1 ? 15 HELX_P HELX_P9 9 THR B 81 ? TYR B 92 ? THR B 80 TYR B 91 1 ? 12 HELX_P HELX_P10 10 VAL B 94 ? SER B 108 ? VAL B 93 SER B 107 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A SER 1 C ? ? ? 1_555 A MSE 2 N ? ? A SER 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.338 ? covale2 covale ? ? A MSE 2 C ? ? ? 1_555 A PHE 3 N ? ? A MSE 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A LEU 7 C ? ? ? 1_555 A MSE 8 N ? ? A LEU 6 A MSE 7 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 8 C ? ? ? 1_555 A ALA 9 N ? ? A MSE 7 A ALA 8 1_555 ? ? ? ? ? ? ? 1.345 ? covale5 covale ? ? A ALA 40 C ? ? ? 1_555 A MSE 41 N ? ? A ALA 39 A MSE 40 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 41 C ? ? ? 1_555 A PHE 42 N ? ? A MSE 40 A PHE 41 1_555 ? ? ? ? ? ? ? 1.325 ? covale7 covale ? ? A TYR 69 C ? ? ? 1_555 A MSE 70 N ? ? A TYR 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.315 ? covale8 covale ? ? A MSE 70 C ? ? ? 1_555 A TYR 71 N ? ? A MSE 69 A TYR 70 1_555 ? ? ? ? ? ? ? 1.333 ? covale9 covale ? ? B SER 1 C ? ? ? 1_555 B MSE 2 N ? ? B SER 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.331 ? covale10 covale ? ? B MSE 2 C ? ? ? 1_555 B PHE 3 N ? ? B MSE 1 B PHE 2 1_555 ? ? ? ? ? ? ? 1.326 ? covale11 covale ? ? B LEU 7 C ? ? ? 1_555 B MSE 8 N ? ? B LEU 6 B MSE 7 1_555 ? ? ? ? ? ? ? 1.333 ? covale12 covale ? ? B MSE 8 C ? ? ? 1_555 B ALA 9 N ? ? B MSE 7 B ALA 8 1_555 ? ? ? ? ? ? ? 1.339 ? covale13 covale ? ? B ALA 40 C ? ? ? 1_555 B MSE 41 N ? ? B ALA 39 B MSE 40 1_555 ? ? ? ? ? ? ? 1.312 ? covale14 covale ? ? B MSE 41 C ? ? ? 1_555 B PHE 42 N ? ? B MSE 40 B PHE 41 1_555 ? ? ? ? ? ? ? 1.327 ? covale15 covale ? ? B TYR 69 C ? ? ? 1_555 B MSE 70 N ? ? B TYR 68 B MSE 69 1_555 ? ? ? ? ? ? ? 1.338 ? covale16 covale ? ? B MSE 70 C ? ? ? 1_555 B TYR 71 N ? ? B MSE 69 B TYR 70 1_555 ? ? ? ? ? ? ? 1.324 ? metalc1 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 1109 B HOH 2093 10_775 ? ? ? ? ? ? ? 2.695 ? metalc2 metalc ? ? C K . K ? ? ? 1_555 B SER 108 O ? ? B K 1109 B SER 107 10_775 ? ? ? ? ? ? ? 2.723 ? metalc3 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 1109 B HOH 2095 10_775 ? ? ? ? ? ? ? 3.110 ? metalc4 metalc ? ? C K . K ? ? ? 1_555 F HOH . O ? ? B K 1109 B HOH 2068 1_555 ? ? ? ? ? ? ? 2.732 ? metalc5 metalc ? ? C K . K ? ? ? 1_555 B ASP 76 OD1 ? ? B K 1109 B ASP 75 1_555 ? ? ? ? ? ? ? 2.706 ? metalc6 metalc ? ? C K . K ? ? ? 1_555 B GLU 106 O ? ? B K 1109 B GLU 105 10_775 ? ? ? ? ? ? ? 3.315 ? metalc7 metalc ? ? C K . K ? ? ? 1_555 B ILE 75 O ? ? B K 1109 B ILE 74 1_555 ? ? ? ? ? ? ? 2.695 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? BA ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel BA 1 2 ? anti-parallel BA 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ARG A 22 ? ALA A 26 ? ARG A 21 ALA A 25 AA 2 VAL A 11 ? VAL A 15 ? VAL A 10 VAL A 14 AA 3 GLU A 52 ? ILE A 55 ? GLU A 51 ILE A 54 BA 1 ARG B 22 ? ALA B 26 ? ARG B 21 ALA B 25 BA 2 VAL B 11 ? VAL B 15 ? VAL B 10 VAL B 14 BA 3 GLU B 52 ? ILE B 55 ? GLU B 51 ILE B 54 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ALA A 26 ? N ALA A 25 O VAL A 11 ? O VAL A 10 AA 2 3 N VAL A 14 ? N VAL A 13 O ILE A 53 ? O ILE A 52 BA 1 2 N ALA B 26 ? N ALA B 25 O VAL B 11 ? O VAL B 10 BA 2 3 N VAL B 14 ? N VAL B 13 O ILE B 53 ? O ILE B 52 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE K B 1109' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE EDO B 1110' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ILE B 75 ? ILE B 74 . ? 1_555 ? 2 AC1 6 ASP B 76 ? ASP B 75 . ? 1_555 ? 3 AC1 6 GLU B 106 ? GLU B 105 . ? 10_775 ? 4 AC1 6 SER B 108 ? SER B 107 . ? 10_775 ? 5 AC1 6 HOH F . ? HOH B 2068 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH B 2093 . ? 10_775 ? 7 AC2 2 LYS B 68 ? LYS B 67 . ? 1_555 ? 8 AC2 2 ASP B 76 ? ASP B 75 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VKP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VKP _atom_sites.fract_transf_matrix[1][1] 0.017201 _atom_sites.fract_transf_matrix[1][2] 0.009931 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019862 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003008 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 PHE 3 2 2 PHE PHE A . n A 1 4 ASN 4 3 3 ASN ASN A . n A 1 5 ASN 5 4 4 ASN ASN A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 MSE 8 7 7 MSE MSE A . n A 1 9 ALA 9 8 8 ALA ALA A . n A 1 10 ASP 10 9 9 ASP ASP A . n A 1 11 VAL 11 10 10 VAL VAL A . n A 1 12 HIS 12 11 11 HIS HIS A . n A 1 13 PHE 13 12 12 PHE PHE A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 PRO 17 16 16 PRO PRO A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 GLY 19 18 18 GLY GLY A . n A 1 20 ALA 20 19 19 ALA ALA A . n A 1 21 THR 21 20 20 THR THR A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 VAL 24 23 23 VAL VAL A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 HIS 27 26 26 HIS HIS A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 TYR 29 28 28 TYR TYR A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 LEU 31 30 30 LEU LEU A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 VAL 33 32 32 VAL VAL A . n A 1 34 GLY 34 33 33 GLY GLY A . n A 1 35 SER 35 34 34 SER SER A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 PHE 38 37 37 PHE PHE A . n A 1 39 TYR 39 38 38 TYR TYR A . n A 1 40 ALA 40 39 39 ALA ALA A . n A 1 41 MSE 41 40 40 MSE MSE A . n A 1 42 PHE 42 41 41 PHE PHE A . n A 1 43 TYR 43 42 42 TYR TYR A . n A 1 44 GLY 44 43 ? ? ? A . n A 1 45 ASP 45 44 ? ? ? A . n A 1 46 LEU 46 45 ? ? ? A . n A 1 47 ALA 47 46 ? ? ? A . n A 1 48 GLU 48 47 ? ? ? A . n A 1 49 VAL 49 48 ? ? ? A . n A 1 50 LYS 50 49 49 LYS LYS A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 HIS 54 53 53 HIS HIS A . n A 1 55 ILE 55 54 54 ILE ILE A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 ASP 57 56 56 ASP ASP A . n A 1 58 VAL 58 57 57 VAL VAL A . n A 1 59 GLU 59 58 58 GLU GLU A . n A 1 60 PRO 60 59 59 PRO PRO A . n A 1 61 ALA 61 60 60 ALA ALA A . n A 1 62 ALA 62 61 61 ALA ALA A . n A 1 63 PHE 63 62 62 PHE PHE A . n A 1 64 LEU 64 63 63 LEU LEU A . n A 1 65 ILE 65 64 64 ILE ILE A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 LEU 67 66 66 LEU LEU A . n A 1 68 LYS 68 67 67 LYS LYS A . n A 1 69 TYR 69 68 68 TYR TYR A . n A 1 70 MSE 70 69 69 MSE MSE A . n A 1 71 TYR 71 70 70 TYR TYR A . n A 1 72 SER 72 71 71 SER SER A . n A 1 73 ASP 73 72 72 ASP ASP A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 ILE 75 74 74 ILE ILE A . n A 1 76 ASP 76 75 75 ASP ASP A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 GLU 78 77 77 GLU GLU A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 LEU 83 82 82 LEU LEU A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 LEU 86 85 85 LEU LEU A . n A 1 87 TYR 87 86 86 TYR TYR A . n A 1 88 ALA 88 87 87 ALA ALA A . n A 1 89 ALA 89 88 88 ALA ALA A . n A 1 90 LYS 90 89 89 LYS LYS A . n A 1 91 LYS 91 90 90 LYS LYS A . n A 1 92 TYR 92 91 91 TYR TYR A . n A 1 93 ILE 93 92 92 ILE ILE A . n A 1 94 VAL 94 93 93 VAL VAL A . n A 1 95 PRO 95 94 94 PRO PRO A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 LYS 99 98 98 LYS LYS A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 CYS 101 100 100 CYS CYS A . n A 1 102 VAL 102 101 101 VAL VAL A . n A 1 103 ASN 103 102 102 ASN ASN A . n A 1 104 PHE 104 103 103 PHE PHE A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 GLU 106 105 105 GLU GLU A . n A 1 107 THR 107 106 106 THR THR A . n A 1 108 SER 108 107 107 SER SER A . n A 1 109 LEU 109 108 108 LEU LEU A . n B 1 1 SER 1 0 0 SER SER B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 PHE 3 2 2 PHE PHE B . n B 1 4 ASN 4 3 3 ASN ASN B . n B 1 5 ASN 5 4 4 ASN ASN B . n B 1 6 GLU 6 5 5 GLU GLU B . n B 1 7 LEU 7 6 6 LEU LEU B . n B 1 8 MSE 8 7 7 MSE MSE B . n B 1 9 ALA 9 8 8 ALA ALA B . n B 1 10 ASP 10 9 9 ASP ASP B . n B 1 11 VAL 11 10 10 VAL VAL B . n B 1 12 HIS 12 11 11 HIS HIS B . n B 1 13 PHE 13 12 12 PHE PHE B . n B 1 14 VAL 14 13 13 VAL VAL B . n B 1 15 VAL 15 14 14 VAL VAL B . n B 1 16 GLY 16 15 15 GLY GLY B . n B 1 17 PRO 17 16 16 PRO PRO B . n B 1 18 PRO 18 17 17 PRO PRO B . n B 1 19 GLY 19 18 18 GLY GLY B . n B 1 20 ALA 20 19 19 ALA ALA B . n B 1 21 THR 21 20 20 THR THR B . n B 1 22 ARG 22 21 21 ARG ARG B . n B 1 23 THR 23 22 22 THR THR B . n B 1 24 VAL 24 23 23 VAL VAL B . n B 1 25 PRO 25 24 24 PRO PRO B . n B 1 26 ALA 26 25 25 ALA ALA B . n B 1 27 HIS 27 26 26 HIS HIS B . n B 1 28 LYS 28 27 27 LYS LYS B . n B 1 29 TYR 29 28 28 TYR TYR B . n B 1 30 VAL 30 29 29 VAL VAL B . n B 1 31 LEU 31 30 30 LEU LEU B . n B 1 32 ALA 32 31 31 ALA ALA B . n B 1 33 VAL 33 32 32 VAL VAL B . n B 1 34 GLY 34 33 33 GLY GLY B . n B 1 35 SER 35 34 34 SER SER B . n B 1 36 SER 36 35 35 SER SER B . n B 1 37 VAL 37 36 36 VAL VAL B . n B 1 38 PHE 38 37 37 PHE PHE B . n B 1 39 TYR 39 38 38 TYR TYR B . n B 1 40 ALA 40 39 39 ALA ALA B . n B 1 41 MSE 41 40 40 MSE MSE B . n B 1 42 PHE 42 41 41 PHE PHE B . n B 1 43 TYR 43 42 42 TYR TYR B . n B 1 44 GLY 44 43 43 GLY GLY B . n B 1 45 ASP 45 44 44 ASP ASP B . n B 1 46 LEU 46 45 45 LEU LEU B . n B 1 47 ALA 47 46 46 ALA ALA B . n B 1 48 GLU 48 47 47 GLU GLU B . n B 1 49 VAL 49 48 48 VAL VAL B . n B 1 50 LYS 50 49 49 LYS LYS B . n B 1 51 SER 51 50 50 SER SER B . n B 1 52 GLU 52 51 51 GLU GLU B . n B 1 53 ILE 53 52 52 ILE ILE B . n B 1 54 HIS 54 53 53 HIS HIS B . n B 1 55 ILE 55 54 54 ILE ILE B . n B 1 56 PRO 56 55 55 PRO PRO B . n B 1 57 ASP 57 56 56 ASP ASP B . n B 1 58 VAL 58 57 57 VAL VAL B . n B 1 59 GLU 59 58 58 GLU GLU B . n B 1 60 PRO 60 59 59 PRO PRO B . n B 1 61 ALA 61 60 60 ALA ALA B . n B 1 62 ALA 62 61 61 ALA ALA B . n B 1 63 PHE 63 62 62 PHE PHE B . n B 1 64 LEU 64 63 63 LEU LEU B . n B 1 65 ILE 65 64 64 ILE ILE B . n B 1 66 LEU 66 65 65 LEU LEU B . n B 1 67 LEU 67 66 66 LEU LEU B . n B 1 68 LYS 68 67 67 LYS LYS B . n B 1 69 TYR 69 68 68 TYR TYR B . n B 1 70 MSE 70 69 69 MSE MSE B . n B 1 71 TYR 71 70 70 TYR TYR B . n B 1 72 SER 72 71 71 SER SER B . n B 1 73 ASP 73 72 72 ASP ASP B . n B 1 74 GLU 74 73 73 GLU GLU B . n B 1 75 ILE 75 74 74 ILE ILE B . n B 1 76 ASP 76 75 75 ASP ASP B . n B 1 77 LEU 77 76 76 LEU LEU B . n B 1 78 GLU 78 77 77 GLU GLU B . n B 1 79 ALA 79 78 78 ALA ALA B . n B 1 80 ASP 80 79 79 ASP ASP B . n B 1 81 THR 81 80 80 THR THR B . n B 1 82 VAL 82 81 81 VAL VAL B . n B 1 83 LEU 83 82 82 LEU LEU B . n B 1 84 ALA 84 83 83 ALA ALA B . n B 1 85 THR 85 84 84 THR THR B . n B 1 86 LEU 86 85 85 LEU LEU B . n B 1 87 TYR 87 86 86 TYR TYR B . n B 1 88 ALA 88 87 87 ALA ALA B . n B 1 89 ALA 89 88 88 ALA ALA B . n B 1 90 LYS 90 89 89 LYS LYS B . n B 1 91 LYS 91 90 90 LYS LYS B . n B 1 92 TYR 92 91 91 TYR TYR B . n B 1 93 ILE 93 92 92 ILE ILE B . n B 1 94 VAL 94 93 93 VAL VAL B . n B 1 95 PRO 95 94 94 PRO PRO B . n B 1 96 ALA 96 95 95 ALA ALA B . n B 1 97 LEU 97 96 96 LEU LEU B . n B 1 98 ALA 98 97 97 ALA ALA B . n B 1 99 LYS 99 98 98 LYS LYS B . n B 1 100 ALA 100 99 99 ALA ALA B . n B 1 101 CYS 101 100 100 CYS CYS B . n B 1 102 VAL 102 101 101 VAL VAL B . n B 1 103 ASN 103 102 102 ASN ASN B . n B 1 104 PHE 104 103 103 PHE PHE B . n B 1 105 LEU 105 104 104 LEU LEU B . n B 1 106 GLU 106 105 105 GLU GLU B . n B 1 107 THR 107 106 106 THR THR B . n B 1 108 SER 108 107 107 SER SER B . n B 1 109 LEU 109 108 108 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 1109 1109 K K B . D 3 EDO 1 1110 1110 EDO EDO B . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2013 2013 HOH HOH A . E 4 HOH 14 2014 2014 HOH HOH A . E 4 HOH 15 2015 2015 HOH HOH A . E 4 HOH 16 2016 2016 HOH HOH A . E 4 HOH 17 2017 2017 HOH HOH A . E 4 HOH 18 2018 2018 HOH HOH A . E 4 HOH 19 2019 2019 HOH HOH A . E 4 HOH 20 2020 2020 HOH HOH A . E 4 HOH 21 2021 2021 HOH HOH A . E 4 HOH 22 2022 2022 HOH HOH A . E 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 24 2024 2024 HOH HOH A . E 4 HOH 25 2025 2025 HOH HOH A . E 4 HOH 26 2026 2026 HOH HOH A . E 4 HOH 27 2027 2027 HOH HOH A . E 4 HOH 28 2028 2028 HOH HOH A . E 4 HOH 29 2029 2029 HOH HOH A . E 4 HOH 30 2030 2030 HOH HOH A . E 4 HOH 31 2031 2031 HOH HOH A . E 4 HOH 32 2032 2032 HOH HOH A . E 4 HOH 33 2033 2033 HOH HOH A . E 4 HOH 34 2034 2034 HOH HOH A . E 4 HOH 35 2035 2035 HOH HOH A . E 4 HOH 36 2036 2036 HOH HOH A . E 4 HOH 37 2037 2037 HOH HOH A . E 4 HOH 38 2038 2038 HOH HOH A . E 4 HOH 39 2039 2039 HOH HOH A . E 4 HOH 40 2040 2040 HOH HOH A . E 4 HOH 41 2041 2041 HOH HOH A . E 4 HOH 42 2042 2042 HOH HOH A . E 4 HOH 43 2043 2043 HOH HOH A . E 4 HOH 44 2044 2044 HOH HOH A . E 4 HOH 45 2045 2045 HOH HOH A . E 4 HOH 46 2046 2046 HOH HOH A . E 4 HOH 47 2047 2047 HOH HOH A . E 4 HOH 48 2048 2048 HOH HOH A . E 4 HOH 49 2049 2049 HOH HOH A . E 4 HOH 50 2050 2050 HOH HOH A . E 4 HOH 51 2051 2051 HOH HOH A . E 4 HOH 52 2052 2052 HOH HOH A . E 4 HOH 53 2053 2053 HOH HOH A . E 4 HOH 54 2054 2054 HOH HOH A . E 4 HOH 55 2055 2055 HOH HOH A . E 4 HOH 56 2056 2056 HOH HOH A . E 4 HOH 57 2057 2057 HOH HOH A . E 4 HOH 58 2058 2058 HOH HOH A . E 4 HOH 59 2059 2059 HOH HOH A . E 4 HOH 60 2060 2060 HOH HOH A . E 4 HOH 61 2061 2061 HOH HOH A . E 4 HOH 62 2062 2062 HOH HOH A . E 4 HOH 63 2063 2063 HOH HOH A . E 4 HOH 64 2064 2064 HOH HOH A . E 4 HOH 65 2065 2065 HOH HOH A . E 4 HOH 66 2066 2066 HOH HOH A . E 4 HOH 67 2067 2067 HOH HOH A . E 4 HOH 68 2068 2068 HOH HOH A . E 4 HOH 69 2069 2069 HOH HOH A . E 4 HOH 70 2070 2070 HOH HOH A . E 4 HOH 71 2071 2071 HOH HOH A . E 4 HOH 72 2072 2072 HOH HOH A . E 4 HOH 73 2073 2073 HOH HOH A . E 4 HOH 74 2074 2074 HOH HOH A . E 4 HOH 75 2075 2075 HOH HOH A . E 4 HOH 76 2076 2076 HOH HOH A . F 4 HOH 1 2001 2001 HOH HOH B . F 4 HOH 2 2002 2002 HOH HOH B . F 4 HOH 3 2003 2003 HOH HOH B . F 4 HOH 4 2004 2004 HOH HOH B . F 4 HOH 5 2005 2005 HOH HOH B . F 4 HOH 6 2006 2006 HOH HOH B . F 4 HOH 7 2007 2007 HOH HOH B . F 4 HOH 8 2008 2008 HOH HOH B . F 4 HOH 9 2009 2009 HOH HOH B . F 4 HOH 10 2010 2010 HOH HOH B . F 4 HOH 11 2011 2011 HOH HOH B . F 4 HOH 12 2012 2012 HOH HOH B . F 4 HOH 13 2013 2013 HOH HOH B . F 4 HOH 14 2014 2014 HOH HOH B . F 4 HOH 15 2015 2015 HOH HOH B . F 4 HOH 16 2016 2016 HOH HOH B . F 4 HOH 17 2017 2017 HOH HOH B . F 4 HOH 18 2018 2018 HOH HOH B . F 4 HOH 19 2019 2019 HOH HOH B . F 4 HOH 20 2020 2020 HOH HOH B . F 4 HOH 21 2021 2021 HOH HOH B . F 4 HOH 22 2022 2022 HOH HOH B . F 4 HOH 23 2023 2023 HOH HOH B . F 4 HOH 24 2024 2024 HOH HOH B . F 4 HOH 25 2025 2025 HOH HOH B . F 4 HOH 26 2026 2026 HOH HOH B . F 4 HOH 27 2027 2027 HOH HOH B . F 4 HOH 28 2028 2028 HOH HOH B . F 4 HOH 29 2029 2029 HOH HOH B . F 4 HOH 30 2030 2030 HOH HOH B . F 4 HOH 31 2031 2031 HOH HOH B . F 4 HOH 32 2032 2032 HOH HOH B . F 4 HOH 33 2033 2033 HOH HOH B . F 4 HOH 34 2034 2034 HOH HOH B . F 4 HOH 35 2035 2035 HOH HOH B . F 4 HOH 36 2036 2036 HOH HOH B . F 4 HOH 37 2037 2037 HOH HOH B . F 4 HOH 38 2038 2038 HOH HOH B . F 4 HOH 39 2039 2039 HOH HOH B . F 4 HOH 40 2040 2040 HOH HOH B . F 4 HOH 41 2041 2041 HOH HOH B . F 4 HOH 42 2042 2042 HOH HOH B . F 4 HOH 43 2043 2043 HOH HOH B . F 4 HOH 44 2044 2044 HOH HOH B . F 4 HOH 45 2045 2045 HOH HOH B . F 4 HOH 46 2046 2046 HOH HOH B . F 4 HOH 47 2047 2047 HOH HOH B . F 4 HOH 48 2048 2048 HOH HOH B . F 4 HOH 49 2049 2049 HOH HOH B . F 4 HOH 50 2050 2050 HOH HOH B . F 4 HOH 51 2051 2051 HOH HOH B . F 4 HOH 52 2052 2052 HOH HOH B . F 4 HOH 53 2053 2053 HOH HOH B . F 4 HOH 54 2054 2054 HOH HOH B . F 4 HOH 55 2055 2055 HOH HOH B . F 4 HOH 56 2056 2056 HOH HOH B . F 4 HOH 57 2057 2057 HOH HOH B . F 4 HOH 58 2058 2058 HOH HOH B . F 4 HOH 59 2059 2059 HOH HOH B . F 4 HOH 60 2060 2060 HOH HOH B . F 4 HOH 61 2061 2061 HOH HOH B . F 4 HOH 62 2062 2062 HOH HOH B . F 4 HOH 63 2063 2063 HOH HOH B . F 4 HOH 64 2064 2064 HOH HOH B . F 4 HOH 65 2065 2065 HOH HOH B . F 4 HOH 66 2066 2066 HOH HOH B . F 4 HOH 67 2067 2067 HOH HOH B . F 4 HOH 68 2068 2068 HOH HOH B . F 4 HOH 69 2069 2069 HOH HOH B . F 4 HOH 70 2070 2070 HOH HOH B . F 4 HOH 71 2071 2071 HOH HOH B . F 4 HOH 72 2072 2072 HOH HOH B . F 4 HOH 73 2073 2073 HOH HOH B . F 4 HOH 74 2074 2074 HOH HOH B . F 4 HOH 75 2075 2075 HOH HOH B . F 4 HOH 76 2076 2076 HOH HOH B . F 4 HOH 77 2077 2077 HOH HOH B . F 4 HOH 78 2078 2078 HOH HOH B . F 4 HOH 79 2079 2079 HOH HOH B . F 4 HOH 80 2080 2080 HOH HOH B . F 4 HOH 81 2081 2081 HOH HOH B . F 4 HOH 82 2082 2082 HOH HOH B . F 4 HOH 83 2083 2083 HOH HOH B . F 4 HOH 84 2084 2084 HOH HOH B . F 4 HOH 85 2085 2085 HOH HOH B . F 4 HOH 86 2086 2086 HOH HOH B . F 4 HOH 87 2087 2087 HOH HOH B . F 4 HOH 88 2088 2088 HOH HOH B . F 4 HOH 89 2089 2089 HOH HOH B . F 4 HOH 90 2090 2090 HOH HOH B . F 4 HOH 91 2091 2091 HOH HOH B . F 4 HOH 92 2092 2092 HOH HOH B . F 4 HOH 93 2093 2093 HOH HOH B . F 4 HOH 94 2094 2094 HOH HOH B . F 4 HOH 95 2095 2095 HOH HOH B . F 4 HOH 96 2096 2096 HOH HOH B . F 4 HOH 97 2097 2097 HOH HOH B . F 4 HOH 98 2098 2098 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 8 A MSE 7 ? MET SELENOMETHIONINE 3 A MSE 41 A MSE 40 ? MET SELENOMETHIONINE 4 A MSE 70 A MSE 69 ? MET SELENOMETHIONINE 5 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 6 B MSE 8 B MSE 7 ? MET SELENOMETHIONINE 7 B MSE 41 B MSE 40 ? MET SELENOMETHIONINE 8 B MSE 70 B MSE 69 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2920 ? 1 MORE -46.5 ? 1 'SSA (A^2)' 24860 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5000000000 -0.8660254038 0.0000000000 29.0675000000 -0.8660254038 -0.5000000000 0.0000000000 50.3463868490 0.0000000000 0.0000000000 -1.0000000000 55.4093333333 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? F HOH . ? B HOH 2093 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B SER 108 ? B SER 107 ? 10_775 83.6 ? 2 O ? F HOH . ? B HOH 2093 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? F HOH . ? B HOH 2095 ? 10_775 98.5 ? 3 O ? B SER 108 ? B SER 107 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? F HOH . ? B HOH 2095 ? 10_775 146.0 ? 4 O ? F HOH . ? B HOH 2093 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? F HOH . ? B HOH 2068 ? 1_555 83.8 ? 5 O ? B SER 108 ? B SER 107 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? F HOH . ? B HOH 2068 ? 1_555 131.3 ? 6 O ? F HOH . ? B HOH 2095 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? F HOH . ? B HOH 2068 ? 1_555 82.4 ? 7 O ? F HOH . ? B HOH 2093 ? 10_775 K ? C K . ? B K 1109 ? 1_555 OD1 ? B ASP 76 ? B ASP 75 ? 1_555 143.2 ? 8 O ? B SER 108 ? B SER 107 ? 10_775 K ? C K . ? B K 1109 ? 1_555 OD1 ? B ASP 76 ? B ASP 75 ? 1_555 88.0 ? 9 O ? F HOH . ? B HOH 2095 ? 10_775 K ? C K . ? B K 1109 ? 1_555 OD1 ? B ASP 76 ? B ASP 75 ? 1_555 108.0 ? 10 O ? F HOH . ? B HOH 2068 ? 1_555 K ? C K . ? B K 1109 ? 1_555 OD1 ? B ASP 76 ? B ASP 75 ? 1_555 75.2 ? 11 O ? F HOH . ? B HOH 2093 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B GLU 106 ? B GLU 105 ? 10_775 69.7 ? 12 O ? B SER 108 ? B SER 107 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B GLU 106 ? B GLU 105 ? 10_775 102.5 ? 13 O ? F HOH . ? B HOH 2095 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B GLU 106 ? B GLU 105 ? 10_775 48.7 ? 14 O ? F HOH . ? B HOH 2068 ? 1_555 K ? C K . ? B K 1109 ? 1_555 O ? B GLU 106 ? B GLU 105 ? 10_775 116.5 ? 15 OD1 ? B ASP 76 ? B ASP 75 ? 1_555 K ? C K . ? B K 1109 ? 1_555 O ? B GLU 106 ? B GLU 105 ? 10_775 146.9 ? 16 O ? F HOH . ? B HOH 2093 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B ILE 75 ? B ILE 74 ? 1_555 140.7 ? 17 O ? B SER 108 ? B SER 107 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B ILE 75 ? B ILE 74 ? 1_555 88.0 ? 18 O ? F HOH . ? B HOH 2095 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B ILE 75 ? B ILE 74 ? 1_555 68.8 ? 19 O ? F HOH . ? B HOH 2068 ? 1_555 K ? C K . ? B K 1109 ? 1_555 O ? B ILE 75 ? B ILE 74 ? 1_555 128.2 ? 20 OD1 ? B ASP 76 ? B ASP 75 ? 1_555 K ? C K . ? B K 1109 ? 1_555 O ? B ILE 75 ? B ILE 74 ? 1_555 74.3 ? 21 O ? B GLU 106 ? B GLU 105 ? 10_775 K ? C K . ? B K 1109 ? 1_555 O ? B ILE 75 ? B ILE 74 ? 1_555 74.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-03-06 4 'Structure model' 1 3 2017-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' Other 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation_author 2 4 'Structure model' entity_src_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation_author.name' 2 4 'Structure model' '_entity_src_gen.gene_src_common_name' 3 4 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 4 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 5 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 41.2846 27.3009 0.6468 0.2153 0.0307 0.0511 -0.0441 0.0678 -0.0430 1.4882 1.5728 2.5896 0.1963 -0.7416 0.1676 -0.1469 0.1373 -0.2094 -0.1850 0.0727 -0.0658 0.2356 -0.0339 0.0742 'X-RAY DIFFRACTION' 2 ? refined 38.0470 25.6666 7.3345 0.2150 0.0180 0.1007 -0.0504 0.0627 -0.0246 3.7510 4.0483 4.2659 -1.5218 0.7173 0.2738 -0.0879 0.1362 -0.3559 -0.0115 -0.0890 -0.0903 0.4830 0.2038 0.1769 'X-RAY DIFFRACTION' 3 ? refined 34.0348 37.5386 -0.1561 0.2035 0.1438 0.0975 -0.0319 -0.0028 0.0184 12.1811 15.7433 16.3144 -8.3971 -8.2479 8.0567 0.1114 0.2964 0.4379 -0.5013 -0.0619 0.3238 -0.9255 -0.5533 -0.0495 'X-RAY DIFFRACTION' 4 ? refined 33.4625 35.9551 12.0509 0.1602 0.0373 0.0865 -0.0393 0.0099 -0.0033 4.1874 2.7477 4.9692 -0.2381 -1.8813 1.4294 -0.0472 0.0723 0.0682 -0.1700 0.0094 0.0952 0.0042 -0.1848 0.0378 'X-RAY DIFFRACTION' 5 ? refined 25.1480 42.3726 17.7359 0.1601 0.0952 0.1366 0.0100 -0.0066 -0.0109 14.1767 6.7871 11.7528 -3.0468 0.8567 2.1061 0.0255 -0.1584 0.3835 0.1745 0.0215 0.6156 -0.4019 -0.6739 -0.0470 'X-RAY DIFFRACTION' 6 ? refined 31.2274 24.4153 40.7777 0.1619 0.1048 0.0471 -0.1445 0.0547 -0.0315 1.0774 1.7635 4.4062 0.3849 0.5329 -0.3525 -0.1454 -0.1632 -0.0365 -0.2894 0.1158 -0.2694 0.4730 -0.1209 0.0295 'X-RAY DIFFRACTION' 7 ? refined 18.1447 21.9852 36.9810 0.1723 0.1910 0.0119 -0.2201 -0.0164 0.0091 5.1576 4.2900 1.7547 -1.1212 0.7737 -2.2936 -0.0807 -0.2231 -0.2150 -0.5359 0.1955 0.1506 0.4264 -0.4137 -0.1148 'X-RAY DIFFRACTION' 8 ? refined 32.3012 26.8894 33.1384 0.1672 0.0886 0.0441 -0.1237 0.0351 -0.0304 1.3923 5.2510 3.4641 0.3312 -1.1811 -0.5144 -0.1443 0.0141 -0.0853 -0.3250 -0.0219 -0.1003 0.3859 -0.2775 0.1662 'X-RAY DIFFRACTION' 9 ? refined 30.2332 37.6276 40.2326 0.1043 0.1592 0.1309 -0.0093 -0.0022 -0.0404 3.6543 17.1829 13.4691 6.8515 -5.4867 -10.6959 0.1359 -0.2031 0.4060 0.3824 -0.1095 0.3106 -0.6832 -0.1190 -0.0264 'X-RAY DIFFRACTION' 10 ? refined 32.0903 37.8144 26.6047 0.1047 0.0867 0.0757 -0.0888 -0.0018 -0.0306 1.7983 2.9251 2.8259 1.1036 -0.0938 -0.9620 -0.1252 -0.0506 0.0640 -0.0703 -0.0054 -0.0816 0.1349 -0.2810 0.1306 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 0 ? ? A 42 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 49 ? ? A 67 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 68 ? ? A 73 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 74 ? ? A 100 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 101 ? ? A 108 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 0 ? ? B 33 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 34 ? ? B 50 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 51 ? ? B 68 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 69 ? ? B 74 ? ? ? ? 'X-RAY DIFFRACTION' 10 10 B 75 ? ? B 108 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0066 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SHELXDE phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 19 ? ? -148.42 47.05 2 1 ALA B 19 ? ? -149.67 46.43 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2015 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.39 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 0 ? OG ? A SER 1 OG 2 1 Y 1 A LYS 49 ? CD ? A LYS 50 CD 3 1 Y 1 A LYS 49 ? CE ? A LYS 50 CE 4 1 Y 1 A LYS 49 ? NZ ? A LYS 50 NZ 5 1 Y 1 A LYS 67 ? CD ? A LYS 68 CD 6 1 Y 1 A LYS 67 ? CE ? A LYS 68 CE 7 1 Y 1 A LYS 67 ? NZ ? A LYS 68 NZ 8 1 Y 1 A ASP 75 ? OD1 ? A ASP 76 OD1 9 1 Y 1 A ASP 75 ? OD2 ? A ASP 76 OD2 10 1 Y 1 A LYS 89 ? NZ ? A LYS 90 NZ 11 1 Y 1 A LYS 98 ? CD ? A LYS 99 CD 12 1 Y 1 A LYS 98 ? CE ? A LYS 99 CE 13 1 Y 1 A LYS 98 ? NZ ? A LYS 99 NZ 14 1 Y 1 A GLU 105 ? CD ? A GLU 106 CD 15 1 Y 1 A GLU 105 ? OE1 ? A GLU 106 OE1 16 1 Y 1 A GLU 105 ? OE2 ? A GLU 106 OE2 17 1 Y 1 B LYS 98 ? NZ ? B LYS 99 NZ 18 1 Y 1 B GLU 105 ? CD ? B GLU 106 CD 19 1 Y 1 B GLU 105 ? OE1 ? B GLU 106 OE1 20 1 Y 1 B GLU 105 ? OE2 ? B GLU 106 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 43 ? A GLY 44 2 1 Y 1 A ASP 44 ? A ASP 45 3 1 Y 1 A LEU 45 ? A LEU 46 4 1 Y 1 A ALA 46 ? A ALA 47 5 1 Y 1 A GLU 47 ? A GLU 48 6 1 Y 1 A VAL 48 ? A VAL 49 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 1,2-ETHANEDIOL EDO 4 water HOH #