HEADER VIRAL PROTEIN 04-JAN-08 2VKY TITLE HEADBINDING DOMAIN OF PHAGE P22 TAILSPIKE C-TERMINALLY FUSED TO TITLE 2 ISOLEUCINE ZIPPER PIIGCN4 (CHIMERA I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAIL PROTEIN, PIIGCN4; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: HEAD-BINDING DOMAIN, RESIDUES 2-124; COMPND 5 SYNONYM: TAILSPIKE-PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: AMINO ACIDS 2-124 OF PHAGE P22 TAILSPIKE HAVE BEEN COMPND 9 LINKED TO THE ISOLEUCINE ZIPPER PIIGCN4 125-155 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P22, SACCHAROMYCES SOURCE 3 CEREVISIAE; SOURCE 4 ORGANISM_COMMON: SALMONELLA PHAGE P22, BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 10754, 4932; SOURCE 6 STRAIN: SALMONELLA ENTERICA TYPHIMURIUM; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET17B; SOURCE 11 OTHER_DETAILS: PIIGCN4, MODIFIED SEQUENCE NCBI GI\:5542583 KEYWDS HEAD-BINDING DOMAIN, PHAGE P22 TAILSPIKE, CHIMERA, HYDROLASE, LATE KEYWDS 2 PROTEIN, ISOLEUCINE ZIPPER PIIGCN4, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SEUL,J.J.MUELLER,G.MUELLER,U.HEINEMANN,R.SECKLER REVDAT 7 13-DEC-23 2VKY 1 REMARK REVDAT 6 30-JAN-19 2VKY 1 REMARK REVDAT 5 13-JUN-18 2VKY 1 TITLE JRNL REVDAT 4 15-MAR-17 2VKY 1 SOURCE REVDAT 3 21-MAY-14 2VKY 1 JRNL REVDAT 2 14-MAY-14 2VKY 1 JRNL REMARK VERSN FORMUL REVDAT 1 10-FEB-09 2VKY 0 JRNL AUTH A.SEUL,J.J.MUELLER,D.ANDRES,E.STETTNER,U.HEINEMANN,R.SECKLER JRNL TITL BACTERIOPHAGE P22 TAILSPIKE: STRUCTURE OF THE COMPLETE JRNL TITL 2 PROTEIN AND FUNCTION OF THE INTERDOMAIN LINKER JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 1336 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24816102 JRNL DOI 10.1107/S1399004714002685 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12111 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 622 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1748 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1340 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.1990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1197 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 173 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.86 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.73000 REMARK 3 B22 (A**2) : -0.73000 REMARK 3 B33 (A**2) : 1.10000 REMARK 3 B12 (A**2) : -0.37000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.137 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.750 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1217 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1118 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1651 ; 1.450 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2623 ; 0.771 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 151 ; 5.599 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;28.184 ;26.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 221 ;13.980 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 4.875 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 192 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1338 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 209 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 241 ; 0.214 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1100 ; 0.168 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 613 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 690 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 92 ; 0.137 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 13 ; 0.166 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 60 ; 0.218 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.192 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 996 ; 2.511 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1241 ; 2.846 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 534 ; 5.756 ; 4.500 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 410 ; 7.579 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 21 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5679 35.4362 -3.6945 REMARK 3 T TENSOR REMARK 3 T11: 0.0607 T22: 0.0418 REMARK 3 T33: 0.0438 T12: -0.0353 REMARK 3 T13: -0.0140 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 4.5121 L22: 0.8208 REMARK 3 L33: 4.5907 L12: -0.7040 REMARK 3 L13: -3.0819 L23: 1.4503 REMARK 3 S TENSOR REMARK 3 S11: 0.2178 S12: -0.5033 S13: 0.3111 REMARK 3 S21: 0.0372 S22: 0.0771 S23: -0.0990 REMARK 3 S31: -0.1495 S32: 0.3846 S33: -0.2949 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 29 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2900 29.8403 -20.5545 REMARK 3 T TENSOR REMARK 3 T11: 0.0221 T22: 0.0575 REMARK 3 T33: -0.0248 T12: -0.0268 REMARK 3 T13: -0.0154 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 2.7015 L22: 26.8096 REMARK 3 L33: 1.5429 L12: -0.4497 REMARK 3 L13: -0.1913 L23: -1.4893 REMARK 3 S TENSOR REMARK 3 S11: 0.0803 S12: 0.1751 S13: 0.1025 REMARK 3 S21: 0.2000 S22: -0.1465 S23: 0.4361 REMARK 3 S31: 0.0027 S32: 0.1660 S33: 0.0662 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 30 B 36 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2682 19.0208 -8.4557 REMARK 3 T TENSOR REMARK 3 T11: -0.0570 T22: -0.0693 REMARK 3 T33: 0.0231 T12: 0.0081 REMARK 3 T13: -0.0047 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 10.2184 L22: 5.4584 REMARK 3 L33: 12.9721 L12: 0.2743 REMARK 3 L13: 8.2532 L23: 1.4552 REMARK 3 S TENSOR REMARK 3 S11: -0.1255 S12: 0.1120 S13: -0.1585 REMARK 3 S21: -0.0922 S22: 0.0880 S23: 0.0809 REMARK 3 S31: -0.0568 S32: -0.0246 S33: 0.0375 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 37 B 42 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4185 16.1914 -4.3740 REMARK 3 T TENSOR REMARK 3 T11: -0.0262 T22: -0.0227 REMARK 3 T33: 0.0179 T12: 0.0195 REMARK 3 T13: -0.0171 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 9.2951 L22: 5.9075 REMARK 3 L33: 2.2745 L12: 0.1039 REMARK 3 L13: 2.4270 L23: -3.0858 REMARK 3 S TENSOR REMARK 3 S11: -0.0465 S12: -0.2708 S13: -0.1442 REMARK 3 S21: -0.0122 S22: -0.1523 S23: 0.0468 REMARK 3 S31: -0.1974 S32: -0.3875 S33: 0.1988 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 43 B 50 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3282 15.2743 -0.5897 REMARK 3 T TENSOR REMARK 3 T11: 0.0051 T22: 0.0995 REMARK 3 T33: 0.0429 T12: 0.0146 REMARK 3 T13: -0.0038 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 12.3841 L22: 2.1638 REMARK 3 L33: 0.3353 L12: -0.2404 REMARK 3 L13: 0.4243 L23: -0.8404 REMARK 3 S TENSOR REMARK 3 S11: -0.0885 S12: -0.9369 S13: 0.1370 REMARK 3 S21: 0.1815 S22: 0.0559 S23: 0.1422 REMARK 3 S31: 0.0301 S32: -0.0214 S33: 0.0326 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 51 B 65 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3813 13.5936 -8.8904 REMARK 3 T TENSOR REMARK 3 T11: 0.0331 T22: 0.0299 REMARK 3 T33: 0.0149 T12: 0.0250 REMARK 3 T13: -0.0501 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 9.7512 L22: 1.1434 REMARK 3 L33: 5.9080 L12: -0.9036 REMARK 3 L13: -4.4410 L23: -0.0086 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: -0.2391 S13: -0.2311 REMARK 3 S21: -0.0450 S22: -0.0786 S23: 0.1329 REMARK 3 S31: 0.1504 S32: 0.4164 S33: 0.0703 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 66 B 74 REMARK 3 ORIGIN FOR THE GROUP (A): -3.4069 22.1467 -16.9932 REMARK 3 T TENSOR REMARK 3 T11: 0.0359 T22: 0.0117 REMARK 3 T33: 0.0036 T12: -0.0078 REMARK 3 T13: -0.0289 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 5.7806 L22: 7.0094 REMARK 3 L33: 3.6347 L12: -0.2519 REMARK 3 L13: 0.6559 L23: -5.0202 REMARK 3 S TENSOR REMARK 3 S11: 0.0899 S12: 0.0631 S13: -0.1408 REMARK 3 S21: -0.2508 S22: 0.3246 S23: 0.3759 REMARK 3 S31: 0.0777 S32: -0.0214 S33: -0.4144 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 75 B 86 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5847 18.9682 -9.1448 REMARK 3 T TENSOR REMARK 3 T11: 0.0448 T22: 0.0590 REMARK 3 T33: 0.0808 T12: -0.0034 REMARK 3 T13: -0.0408 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 6.7645 L22: 3.0731 REMARK 3 L33: 15.6461 L12: 0.3820 REMARK 3 L13: 7.2169 L23: 2.1605 REMARK 3 S TENSOR REMARK 3 S11: -0.2221 S12: -0.1821 S13: -0.0125 REMARK 3 S21: -0.2829 S22: -0.0786 S23: 0.4249 REMARK 3 S31: -0.4639 S32: -0.8085 S33: 0.3007 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 87 B 95 REMARK 3 ORIGIN FOR THE GROUP (A): 10.0683 21.6473 -5.9352 REMARK 3 T TENSOR REMARK 3 T11: -0.0058 T22: -0.0194 REMARK 3 T33: 0.0314 T12: 0.0031 REMARK 3 T13: -0.0120 T23: -0.0258 REMARK 3 L TENSOR REMARK 3 L11: 3.1295 L22: 1.7019 REMARK 3 L33: 15.3672 L12: -0.6847 REMARK 3 L13: 2.1418 L23: -0.7385 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: -0.1013 S13: -0.0679 REMARK 3 S21: -0.0143 S22: 0.0722 S23: -0.0298 REMARK 3 S31: -0.2756 S32: -0.3283 S33: -0.0525 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 96 B 105 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9929 25.6177 -5.7150 REMARK 3 T TENSOR REMARK 3 T11: 0.0306 T22: 0.0010 REMARK 3 T33: 0.0316 T12: -0.0174 REMARK 3 T13: 0.0058 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 3.9895 L22: 1.6632 REMARK 3 L33: 11.0473 L12: 0.8487 REMARK 3 L13: 2.7314 L23: -1.2981 REMARK 3 S TENSOR REMARK 3 S11: -0.1376 S12: 0.0858 S13: 0.0242 REMARK 3 S21: 0.0088 S22: -0.0670 S23: 0.0974 REMARK 3 S31: -0.3864 S32: 0.6941 S33: 0.2046 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 106 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): 2.6232 26.3950 -0.4932 REMARK 3 T TENSOR REMARK 3 T11: 0.0842 T22: -0.0182 REMARK 3 T33: 0.0578 T12: 0.0661 REMARK 3 T13: -0.0026 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 44.5819 L22: 3.0398 REMARK 3 L33: 3.7992 L12: 0.5660 REMARK 3 L13: -4.5487 L23: 2.8583 REMARK 3 S TENSOR REMARK 3 S11: 0.1902 S12: 0.4911 S13: 0.6236 REMARK 3 S21: -0.0118 S22: -0.2091 S23: 0.2923 REMARK 3 S31: -0.1544 S32: -0.1833 S33: 0.0189 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 111 B 115 REMARK 3 ORIGIN FOR THE GROUP (A): -6.7523 27.6816 6.7875 REMARK 3 T TENSOR REMARK 3 T11: 0.0810 T22: 0.1092 REMARK 3 T33: 0.0897 T12: 0.0370 REMARK 3 T13: -0.0135 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 8.7847 L22: 5.2816 REMARK 3 L33: 41.5889 L12: 0.0863 REMARK 3 L13: -7.2908 L23: 13.6275 REMARK 3 S TENSOR REMARK 3 S11: 0.1604 S12: 0.0096 S13: -0.0529 REMARK 3 S21: -0.4706 S22: -0.2139 S23: 0.0546 REMARK 3 S31: -0.7707 S32: -0.0882 S33: 0.0535 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 116 B 123 REMARK 3 ORIGIN FOR THE GROUP (A): -6.6422 28.2481 17.7353 REMARK 3 T TENSOR REMARK 3 T11: 0.0876 T22: 0.1560 REMARK 3 T33: 0.0702 T12: 0.0172 REMARK 3 T13: -0.0454 T23: -0.0464 REMARK 3 L TENSOR REMARK 3 L11: 9.3803 L22: 13.3562 REMARK 3 L33: 72.3209 L12: -1.2471 REMARK 3 L13: -6.1271 L23: 16.1769 REMARK 3 S TENSOR REMARK 3 S11: -0.2219 S12: -0.3226 S13: 0.0546 REMARK 3 S21: 0.1759 S22: -0.1945 S23: 0.0812 REMARK 3 S31: 0.0658 S32: -0.2989 S33: 0.4164 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 124 B 128 REMARK 3 ORIGIN FOR THE GROUP (A): -5.3383 32.0932 25.3210 REMARK 3 T TENSOR REMARK 3 T11: 0.1778 T22: 0.1842 REMARK 3 T33: 0.0290 T12: -0.0599 REMARK 3 T13: -0.0245 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 11.8212 L22: 9.6182 REMARK 3 L33: 44.0491 L12: -1.3076 REMARK 3 L13: 7.3715 L23: 14.0964 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.8716 S13: -0.3776 REMARK 3 S21: -0.8173 S22: -0.0179 S23: 0.0396 REMARK 3 S31: -1.6058 S32: 0.7410 S33: 0.0017 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 129 B 133 REMARK 3 ORIGIN FOR THE GROUP (A): -6.3342 30.5818 33.2769 REMARK 3 T TENSOR REMARK 3 T11: 0.0458 T22: 0.0349 REMARK 3 T33: 0.0338 T12: -0.0301 REMARK 3 T13: -0.0195 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 14.6884 L22: 9.1362 REMARK 3 L33: 57.7191 L12: 2.9170 REMARK 3 L13: -4.5896 L23: 11.1138 REMARK 3 S TENSOR REMARK 3 S11: -0.0541 S12: 0.1466 S13: -0.6388 REMARK 3 S21: -0.3425 S22: -0.0362 S23: -0.0327 REMARK 3 S31: 0.0084 S32: -0.7446 S33: 0.0903 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 134 B 141 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8388 27.4969 46.2437 REMARK 3 T TENSOR REMARK 3 T11: 0.1128 T22: 0.0132 REMARK 3 T33: 0.0068 T12: 0.1037 REMARK 3 T13: 0.0170 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 4.8048 L22: 2.1753 REMARK 3 L33: 13.4915 L12: -0.3521 REMARK 3 L13: 2.5853 L23: 1.0858 REMARK 3 S TENSOR REMARK 3 S11: 0.1571 S12: 0.3418 S13: -0.4921 REMARK 3 S21: 0.0436 S22: 0.0735 S23: 0.2219 REMARK 3 S31: 1.3686 S32: 1.1273 S33: -0.2306 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 142 B 154 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5071 36.0489 50.6177 REMARK 3 T TENSOR REMARK 3 T11: -0.0326 T22: -0.0524 REMARK 3 T33: 0.0244 T12: 0.0179 REMARK 3 T13: 0.0123 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 6.5796 L22: 5.3639 REMARK 3 L33: 26.3430 L12: -1.3944 REMARK 3 L13: 3.9810 L23: 0.3788 REMARK 3 S TENSOR REMARK 3 S11: -0.0925 S12: -0.1916 S13: 0.1091 REMARK 3 S21: 0.2604 S22: -0.0362 S23: 0.2313 REMARK 3 S31: -0.0439 S32: 0.2422 S33: 0.1287 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE HEAD-BINDING DOMAIN IS FUSED TO THE ISOLEUCINE REMARK 3 ZIPPER PIIGCN4. THE BIOLOGICALLY ACTIVE HEAD- BINDING DOMAIN IS REMARK 3 A CRYSTALLOGRAPHIC TRIMER. REMARK 4 REMARK 4 2VKY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1290034706. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU H2B REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRROR REMARK 200 OPTICS : SLITS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12716 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 19.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03000 REMARK 200 FOR THE DATA SET : 31.6600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.10000 REMARK 200 FOR SHELL : 13.60 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRIES 1LKT, 1EBO REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP. REMARK 280 PROTEIN: CONC. 8.2 MG/ML,BUFFER 50MM HEPES, PH6.5; RESERVOIR: 20% REMARK 280 ISOPROPANOL, 0.1M NA-ACETATE, PH4.6, 0.2M CACL2; DROPLET 2 REMARK 280 MICROL: 2 MICROL.CRYO:30% GLYCEROL. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 53.56000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.56000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 53.56000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 -28.90500 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 50.06493 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 28.90500 REMARK 350 BIOMT2 3 0.866025 -0.500000 0.000000 50.06493 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2009 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2015 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN B, TYR 124 TO LEU REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR B 2 REMARK 465 GLU B 155 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LKT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HEAD-BINDING DOMAIN OF PHAGE P22TAILSPIKE REMARK 900 PROTEIN REMARK 900 RELATED ID: 1QA1 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT V331G REMARK 900 RELATED ID: 1QA2 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT A334V REMARK 900 RELATED ID: 1QA3 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT A334I REMARK 900 RELATED ID: 1QRB RELATED DB: PDB REMARK 900 PLASTICITY AND STERIC STRAIN IN A PARALLEL BETA-HELIX:RATIONAL REMARK 900 MUTATIONS IN P22 TAILSPIKE PROTEIN REMARK 900 RELATED ID: 1TYV RELATED DB: PDB REMARK 900 STRUCTURE OF TAILSPIKE-PROTEIN REMARK 900 RELATED ID: 2VFM RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666) REMARK 900 RELATED ID: 1CLW RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN FROM PHAGE P22, V331A MUTANT REMARK 900 RELATED ID: 1QQ1 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT E359G REMARK 900 RELATED ID: 1QRC RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT W391A REMARK 900 RELATED ID: 1TSP RELATED DB: PDB REMARK 900 RELATED ID: 2VFN RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V125A REMARK 900 RELATED ID: 2VFO RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V125L REMARK 900 RELATED ID: 2VFP RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V349L REMARK 900 RELATED ID: 2VFQ RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V450A REMARK 900 RELATED ID: 2VNL RELATED DB: PDB REMARK 900 MUTANT Y108WDEL OF THE HEADBINDING DOMAIN OF PHAGE P22 TAILSPIKE C- REMARK 900 TERMINALLY FUSED TO ISOLEUCINE ZIPPER PIIGCN4 (CHIMERA II) REMARK 900 RELATED ID: 2XC1 RELATED DB: PDB REMARK 900 FULL-LENGTH TAILSPIKE PROTEIN MUTANT Y108W OF BACTERIOPHAGE P22 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 125 TO 155 ARE NOT FOUND IN UNIPROT ENTRY REMARK 999 P12528 BUT ARE PART OF GENBANK ENTRY GI:5542583. REMARK 999 M1 OF GI5542583 IS MUTATED TO I125 IN THIS ENTRY. DBREF 2VKY B 2 124 UNP P12528 TSPE_BPP22 2 124 DBREF 2VKY B 125 155 PDB 2VKY 2VKY 125 155 SEQADV 2VKY LEU B 124 UNP P12528 TYR 124 ENGINEERED MUTATION SEQRES 1 B 154 THR ASP ILE THR ALA ASN VAL VAL VAL SER ASN PRO ARG SEQRES 2 B 154 PRO ILE PHE THR GLU SER ARG SER PHE LYS ALA VAL ALA SEQRES 3 B 154 ASN GLY LYS ILE TYR ILE GLY GLN ILE ASP THR ASP PRO SEQRES 4 B 154 VAL ASN PRO ALA ASN GLN ILE PRO VAL TYR ILE GLU ASN SEQRES 5 B 154 GLU ASP GLY SER HIS VAL GLN ILE THR GLN PRO LEU ILE SEQRES 6 B 154 ILE ASN ALA ALA GLY LYS ILE VAL TYR ASN GLY GLN LEU SEQRES 7 B 154 VAL LYS ILE VAL THR VAL GLN GLY HIS SER MET ALA ILE SEQRES 8 B 154 TYR ASP ALA ASN GLY SER GLN VAL ASP TYR ILE ALA ASN SEQRES 9 B 154 VAL LEU LYS TYR ASP PRO ASP GLN TYR SER ILE GLU ALA SEQRES 10 B 154 ASP LYS LYS PHE LYS LEU ILE LYS GLN ILE GLU ASP LYS SEQRES 11 B 154 ILE GLU GLU ILE LEU SER LYS ILE TYR HIS ILE GLU ASN SEQRES 12 B 154 GLU ILE ALA ARG ILE LYS LYS LEU ILE GLY GLU FORMUL 2 HOH *173(H2 O) HELIX 1 1 ASN B 42 ASN B 45 5 4 HELIX 2 2 ASP B 110 GLY B 154 1 45 SHEET 1 BA 6 GLN B 78 LEU B 79 0 SHEET 2 BA 6 ILE B 73 TYR B 75 -1 O TYR B 75 N GLN B 78 SHEET 3 BA 6 LEU B 65 ILE B 67 -1 O ILE B 66 N VAL B 74 SHEET 4 BA 6 LYS B 30 GLY B 34 -1 O ILE B 31 N LEU B 65 SHEET 5 BA 6 HIS B 88 TYR B 93 -1 O SER B 89 N GLY B 34 SHEET 6 BA 6 GLN B 99 VAL B 106 -1 N VAL B 100 O ILE B 92 SHEET 1 BB 3 HIS B 58 ILE B 61 0 SHEET 2 BB 3 VAL B 49 GLU B 52 -1 O VAL B 49 N ILE B 61 SHEET 3 BB 3 ILE B 82 VAL B 83 -1 O VAL B 83 N TYR B 50 CISPEP 1 GLN B 63 PRO B 64 0 -0.15 CRYST1 57.810 57.810 107.120 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017298 0.009987 0.000000 0.00000 SCALE2 0.000000 0.019974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009335 0.00000