HEADER TRANSFERASE 14-JAN-08 2VLG TITLE KINA PAS-A DOMAIN, HOMODIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPORULATION KINASE A; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: PAS-A, RESIDUES 10-117; COMPND 5 SYNONYM: STAGE II SPORULATION PROTEIN J, KINA PAS-A; COMPND 6 EC: 2.7.13.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 STRAIN: STRAIN 1A40; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PHIS6GBETA1; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PHIS6GBETA1KINA; SOURCE 10 OTHER_DETAILS: BACILLUS GENETIC STOCK CENTER, COLUMBUS, OH, U.S.A. KEYWDS HISTIDINE KINASE, TWO-COMPONENT REGULATORY SYSTEM, TWO-COMPONENT KEYWDS 2 SIGNAL TRANSDUCTION, TRANSFERASE, SPORULATION, PHOSPHORYLATION, KEYWDS 3 SCOD, SCOB, GSIC, SPOIIJ, KINASE, SPOIIF, PAS DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LEE,D.R.TOMCHICK,C.A.BRAUTIGAM,M.MACHIUS,R.KORT,K.J.HELLINGWERF, AUTHOR 2 K.H.GARDNER REVDAT 5 15-MAY-19 2VLG 1 REMARK REVDAT 4 08-MAY-19 2VLG 1 REMARK REVDAT 3 24-FEB-09 2VLG 1 VERSN REVDAT 2 08-APR-08 2VLG 1 AUTHOR JRNL REMARK REVDAT 1 18-MAR-08 2VLG 0 JRNL AUTH J.LEE,D.R.TOMCHICK,C.A.BRAUTIGAM,M.MACHIUS,R.KORT, JRNL AUTH 2 K.J.HELLINGWERF,K.H.GARDNER JRNL TITL CHANGES AT THE KINA PAS-A DIMERIZATION INTERFACE INFLUENCE JRNL TITL 2 HISTIDINE KINASE FUNCTION. JRNL REF BIOCHEMISTRY V. 47 4051 2008 JRNL REFN ISSN 0006-2960 JRNL PMID 18324779 JRNL DOI 10.1021/BI7021156 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 87.9 REMARK 3 NUMBER OF REFLECTIONS : 40811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1499 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1758 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3207 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 301 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.51000 REMARK 3 B22 (A**2) : 2.99000 REMARK 3 B33 (A**2) : -1.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.07000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.130 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.938 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3320 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4478 ; 1.761 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 390 ; 6.719 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;30.568 ;23.631 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 613 ;13.795 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;13.490 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 509 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2440 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1388 ; 0.219 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2313 ; 0.319 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 297 ; 0.167 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 84 ; 0.201 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 20 ; 0.197 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2030 ; 1.222 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3175 ; 1.834 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1471 ; 2.527 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1303 ; 3.732 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 114 REMARK 3 ORIGIN FOR THE GROUP (A): 34.2803 9.4970 13.2805 REMARK 3 T TENSOR REMARK 3 T11: -0.0351 T22: -0.0820 REMARK 3 T33: -0.0474 T12: 0.0046 REMARK 3 T13: 0.0085 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 2.1222 L22: 1.0453 REMARK 3 L33: 3.7557 L12: 0.0009 REMARK 3 L13: -0.1451 L23: -0.2402 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.1277 S13: 0.0201 REMARK 3 S21: -0.0471 S22: 0.0003 S23: -0.0035 REMARK 3 S31: -0.0144 S32: 0.1207 S33: 0.0163 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 114 REMARK 3 ORIGIN FOR THE GROUP (A): 44.6858 9.7815 -9.8791 REMARK 3 T TENSOR REMARK 3 T11: -0.0422 T22: -0.0275 REMARK 3 T33: -0.0748 T12: -0.0377 REMARK 3 T13: 0.0019 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 3.3192 L22: 0.7936 REMARK 3 L33: 3.3929 L12: 0.0509 REMARK 3 L13: -0.8294 L23: 0.3779 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: -0.2193 S13: 0.0674 REMARK 3 S21: 0.0230 S22: 0.0341 S23: -0.0080 REMARK 3 S31: -0.1050 S32: 0.4103 S33: 0.0019 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 15 C 116 REMARK 3 ORIGIN FOR THE GROUP (A): 22.4442 5.4054 -24.1438 REMARK 3 T TENSOR REMARK 3 T11: -0.0595 T22: -0.0144 REMARK 3 T33: -0.0469 T12: -0.0586 REMARK 3 T13: 0.0061 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 3.7766 L22: 0.8563 REMARK 3 L33: 2.0694 L12: -0.3218 REMARK 3 L13: 0.9801 L23: 0.0893 REMARK 3 S TENSOR REMARK 3 S11: 0.1309 S12: -0.3748 S13: -0.0792 REMARK 3 S21: 0.0578 S22: -0.0835 S23: 0.0818 REMARK 3 S31: 0.0243 S32: -0.1008 S33: -0.0474 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 15 D 117 REMARK 3 ORIGIN FOR THE GROUP (A): 29.0493 4.9231 -47.2683 REMARK 3 T TENSOR REMARK 3 T11: -0.0596 T22: -0.0336 REMARK 3 T33: -0.0574 T12: 0.0216 REMARK 3 T13: -0.0075 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.9596 L22: 1.3493 REMARK 3 L33: 2.7514 L12: 0.1921 REMARK 3 L13: -0.1494 L23: 0.3871 REMARK 3 S TENSOR REMARK 3 S11: 0.0242 S12: 0.1882 S13: 0.0061 REMARK 3 S21: -0.0799 S22: -0.0447 S23: -0.0328 REMARK 3 S31: 0.0400 S32: -0.0041 S33: 0.0206 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1290035011. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97924 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42220 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.710 REMARK 200 RESOLUTION RANGE LOW (A) : 44.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 56.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, MLPHARE, DM REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 DEGREES CELSIUS, HANGING-DROP VAPOR REMARK 280 DIFFUSION: 1 MICROLITER KINA (7 MG/ML IN 25 MM TRIS, PH 8, 100 REMARK 280 MM NACL PLUS 1 MICROLITER WELL SOLUTION (13 TO 15% (W/V) PEG 10, REMARK 280 000, 0.1 M AMMONIUM ACETATE, 0.1 M BIS-TRIS, PH 5.5); CRYSTALS REMARK 280 APPEARED AFTER ABOUT ONE DAY AND GREW TO A FINAL SIZE OF ABOUT REMARK 280 80 X 80 X 100 MICROMETERS WITHIN FOUR DAYS; CRYO-PROTECTION: REMARK 280 STEPWISE TRANSFER INTO WELL SOLUTION SUPPLEMENTED WITH UP TO 25% REMARK 280 (V/V) GLYCEROL., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.75800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 7 REMARK 465 GLU A 8 REMARK 465 PHE A 9 REMARK 465 PRO A 10 REMARK 465 LEU A 11 REMARK 465 GLN A 12 REMARK 465 THR A 13 REMARK 465 LYS A 14 REMARK 465 THR A 97 REMARK 465 THR A 98 REMARK 465 ARG A 99 REMARK 465 ALA A 100 REMARK 465 GLU A 101 REMARK 465 ARG A 102 REMARK 465 THR A 103 REMARK 465 GLU A 115 REMARK 465 GLU A 116 REMARK 465 GLU A 117 REMARK 465 GLY B 7 REMARK 465 GLU B 8 REMARK 465 PHE B 9 REMARK 465 PRO B 10 REMARK 465 LEU B 11 REMARK 465 GLN B 12 REMARK 465 THR B 13 REMARK 465 LYS B 14 REMARK 465 THR B 98 REMARK 465 ARG B 99 REMARK 465 ALA B 100 REMARK 465 GLU B 101 REMARK 465 ARG B 102 REMARK 465 THR B 103 REMARK 465 GLU B 104 REMARK 465 GLU B 115 REMARK 465 GLU B 116 REMARK 465 GLU B 117 REMARK 465 GLY C 7 REMARK 465 GLU C 8 REMARK 465 PHE C 9 REMARK 465 PRO C 10 REMARK 465 LEU C 11 REMARK 465 GLN C 12 REMARK 465 THR C 13 REMARK 465 LYS C 14 REMARK 465 GLU C 117 REMARK 465 GLY D 7 REMARK 465 GLU D 8 REMARK 465 PHE D 9 REMARK 465 PRO D 10 REMARK 465 LEU D 11 REMARK 465 GLN D 12 REMARK 465 THR D 13 REMARK 465 LYS D 14 REMARK 465 GLU D 69 REMARK 465 HIS D 70 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 72 -60.90 -138.43 REMARK 500 LEU B 72 -64.10 -137.22 REMARK 500 HIS C 70 36.40 -151.92 REMARK 500 LEU C 72 16.29 53.45 REMARK 500 ALA C 100 -124.88 -124.83 REMARK 500 ALA D 100 -90.00 -115.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C2009 DISTANCE = 8.02 ANGSTROMS REMARK 525 HOH C2023 DISTANCE = 6.34 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C1117 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C1118 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D1115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B1115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C1115 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 7-9 (GEF) BELONG TO THE CLONING LINKER DBREF 2VLG A 7 9 PDB 2VLG 2VLG 7 9 DBREF 2VLG A 10 117 UNP P16497 KINA_BACSU 10 117 DBREF 2VLG B 7 9 PDB 2VLG 2VLG 7 9 DBREF 2VLG B 10 117 UNP P16497 KINA_BACSU 10 117 DBREF 2VLG C 7 9 PDB 2VLG 2VLG 7 9 DBREF 2VLG C 10 117 UNP P16497 KINA_BACSU 10 117 DBREF 2VLG D 7 9 PDB 2VLG 2VLG 7 9 DBREF 2VLG D 10 117 UNP P16497 KINA_BACSU 10 117 SEQRES 1 A 111 GLY GLU PHE PRO LEU GLN THR LYS THR ASP ILE HIS ALA SEQRES 2 A 111 VAL LEU ALA SER ASN GLY ARG ILE ILE TYR ILE SER ALA SEQRES 3 A 111 ASN SER LYS LEU HIS LEU GLY TYR LEU GLN GLY GLU MET SEQRES 4 A 111 ILE GLY SER PHE LEU LYS THR PHE LEU HIS GLU GLU ASP SEQRES 5 A 111 GLN PHE LEU VAL GLU SER TYR PHE TYR ASN GLU HIS HIS SEQRES 6 A 111 LEU MET PRO CYS THR PHE ARG PHE ILE LYS LYS ASP HIS SEQRES 7 A 111 THR ILE VAL TRP VAL GLU ALA ALA VAL GLU ILE VAL THR SEQRES 8 A 111 THR ARG ALA GLU ARG THR GLU ARG GLU ILE ILE LEU LYS SEQRES 9 A 111 MET LYS VAL LEU GLU GLU GLU SEQRES 1 B 111 GLY GLU PHE PRO LEU GLN THR LYS THR ASP ILE HIS ALA SEQRES 2 B 111 VAL LEU ALA SER ASN GLY ARG ILE ILE TYR ILE SER ALA SEQRES 3 B 111 ASN SER LYS LEU HIS LEU GLY TYR LEU GLN GLY GLU MET SEQRES 4 B 111 ILE GLY SER PHE LEU LYS THR PHE LEU HIS GLU GLU ASP SEQRES 5 B 111 GLN PHE LEU VAL GLU SER TYR PHE TYR ASN GLU HIS HIS SEQRES 6 B 111 LEU MET PRO CYS THR PHE ARG PHE ILE LYS LYS ASP HIS SEQRES 7 B 111 THR ILE VAL TRP VAL GLU ALA ALA VAL GLU ILE VAL THR SEQRES 8 B 111 THR ARG ALA GLU ARG THR GLU ARG GLU ILE ILE LEU LYS SEQRES 9 B 111 MET LYS VAL LEU GLU GLU GLU SEQRES 1 C 111 GLY GLU PHE PRO LEU GLN THR LYS THR ASP ILE HIS ALA SEQRES 2 C 111 VAL LEU ALA SER ASN GLY ARG ILE ILE TYR ILE SER ALA SEQRES 3 C 111 ASN SER LYS LEU HIS LEU GLY TYR LEU GLN GLY GLU MET SEQRES 4 C 111 ILE GLY SER PHE LEU LYS THR PHE LEU HIS GLU GLU ASP SEQRES 5 C 111 GLN PHE LEU VAL GLU SER TYR PHE TYR ASN GLU HIS HIS SEQRES 6 C 111 LEU MET PRO CYS THR PHE ARG PHE ILE LYS LYS ASP HIS SEQRES 7 C 111 THR ILE VAL TRP VAL GLU ALA ALA VAL GLU ILE VAL THR SEQRES 8 C 111 THR ARG ALA GLU ARG THR GLU ARG GLU ILE ILE LEU LYS SEQRES 9 C 111 MET LYS VAL LEU GLU GLU GLU SEQRES 1 D 111 GLY GLU PHE PRO LEU GLN THR LYS THR ASP ILE HIS ALA SEQRES 2 D 111 VAL LEU ALA SER ASN GLY ARG ILE ILE TYR ILE SER ALA SEQRES 3 D 111 ASN SER LYS LEU HIS LEU GLY TYR LEU GLN GLY GLU MET SEQRES 4 D 111 ILE GLY SER PHE LEU LYS THR PHE LEU HIS GLU GLU ASP SEQRES 5 D 111 GLN PHE LEU VAL GLU SER TYR PHE TYR ASN GLU HIS HIS SEQRES 6 D 111 LEU MET PRO CYS THR PHE ARG PHE ILE LYS LYS ASP HIS SEQRES 7 D 111 THR ILE VAL TRP VAL GLU ALA ALA VAL GLU ILE VAL THR SEQRES 8 D 111 THR ARG ALA GLU ARG THR GLU ARG GLU ILE ILE LEU LYS SEQRES 9 D 111 MET LYS VAL LEU GLU GLU GLU HET CL B1115 1 HET CL B1116 1 HET CL C1115 1 HET ACT C1117 4 HET ACT C1118 4 HET CL D1115 1 HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION FORMUL 5 CL 4(CL 1-) FORMUL 8 ACT 2(C2 H3 O2 1-) FORMUL 11 HOH *301(H2 O) HELIX 1 1 ASN A 33 GLY A 39 1 7 HELIX 2 2 LEU A 41 ILE A 46 1 6 HELIX 3 3 LEU A 50 PHE A 53 5 4 HELIX 4 4 HIS A 55 GLU A 57 5 3 HELIX 5 5 ASP A 58 ASN A 68 1 11 HELIX 6 6 ASN B 33 GLY B 39 1 7 HELIX 7 7 LEU B 41 ILE B 46 1 6 HELIX 8 8 LEU B 50 PHE B 53 5 4 HELIX 9 9 HIS B 55 GLU B 57 5 3 HELIX 10 10 ASP B 58 ASN B 68 1 11 HELIX 11 11 ASN C 33 GLY C 39 1 7 HELIX 12 12 LEU C 41 ILE C 46 1 6 HELIX 13 13 LEU C 50 PHE C 53 5 4 HELIX 14 14 HIS C 55 PHE C 60 1 6 HELIX 15 15 VAL C 62 ASN C 68 1 7 HELIX 16 16 ASN D 33 GLY D 39 1 7 HELIX 17 17 LEU D 41 ILE D 46 1 6 HELIX 18 18 LEU D 50 LEU D 54 5 5 HELIX 19 19 HIS D 55 PHE D 66 1 12 SHEET 1 AA 5 ILE A 27 ILE A 30 0 SHEET 2 AA 5 ILE A 17 LEU A 21 -1 O VAL A 20 N ILE A 28 SHEET 3 AA 5 ILE A 107 VAL A 113 -1 O ILE A 107 N LEU A 21 SHEET 4 AA 5 ILE A 86 ILE A 95 -1 O GLU A 90 N LYS A 112 SHEET 5 AA 5 CYS A 75 ILE A 80 -1 O CYS A 75 N ALA A 91 SHEET 1 BA 5 ILE B 27 ILE B 30 0 SHEET 2 BA 5 ILE B 17 LEU B 21 -1 O VAL B 20 N ILE B 28 SHEET 3 BA 5 ILE B 107 VAL B 113 -1 O ILE B 107 N LEU B 21 SHEET 4 BA 5 ILE B 86 ILE B 95 -1 O GLU B 90 N LYS B 112 SHEET 5 BA 5 CYS B 75 ILE B 80 -1 O CYS B 75 N ALA B 91 SHEET 1 CA 5 ILE C 27 ILE C 30 0 SHEET 2 CA 5 ILE C 17 ALA C 22 -1 O VAL C 20 N ILE C 28 SHEET 3 CA 5 THR C 103 VAL C 113 -1 O ILE C 107 N LEU C 21 SHEET 4 CA 5 ILE C 86 ARG C 99 -1 O GLU C 90 N LYS C 112 SHEET 5 CA 5 CYS C 75 ILE C 80 -1 O CYS C 75 N ALA C 91 SHEET 1 DA 5 ILE D 27 ILE D 30 0 SHEET 2 DA 5 ILE D 17 ALA D 22 -1 O VAL D 20 N ILE D 28 SHEET 3 DA 5 THR D 103 LEU D 114 -1 O ILE D 107 N LEU D 21 SHEET 4 DA 5 ILE D 86 ARG D 99 -1 O TRP D 88 N LEU D 114 SHEET 5 DA 5 CYS D 75 ILE D 80 -1 O CYS D 75 N ALA D 91 SITE 1 AC1 8 ALA C 19 VAL C 20 ILE C 108 HOH C2004 SITE 2 AC1 8 HOH C2084 ALA D 19 VAL D 20 ILE D 108 SITE 1 AC2 4 ALA C 92 GLU C 94 ILE C 108 LYS C 110 SITE 1 AC3 3 GLU A 69 HIS A 71 HOH D2039 SITE 1 AC4 3 TYR A 29 HOH A2006 TYR B 29 SITE 1 AC5 1 HOH D2074 CRYST1 53.568 55.516 78.879 90.00 109.01 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018668 0.000000 0.006432 0.00000 SCALE2 0.000000 0.018013 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013409 0.00000