HEADER OXYGEN TRANSPORT 20-JAN-08 2VM0 TITLE CRYSTAL STRUCTURE OF RADIATION-INDUCED MYOGLOBIN COMPOUND II GENERATED TITLE 2 AFTER ANNEALING OF PEROXYMYOGLOBIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOGLOBIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2-154; COMPND 5 OTHER_DETAILS: FE(IV)OH SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796; SOURCE 5 ORGAN: HEART KEYWDS HAEM, IRON, HEME, FERRYL, TRANSPORT, PEROXIDASE, OXYGEN TRANSPORT, KEYWDS 2 OXYGEN ACTIVATION, RADIOLYTIC- REDUCTION, REACTION INTERMEDIATE, KEYWDS 3 MONOOXYGENASE, METAL-BINDING, MUSCLE PROTEIN, X-RAY-INDUCED- KEYWDS 4 PHOTOREDUCTION EXPDTA X-RAY DIFFRACTION AUTHOR H.-P.HERSLETH,C.H.GORBITZ,K.K.ANDERSSON REVDAT 6 13-DEC-23 2VM0 1 REMARK REVDAT 5 08-JUN-11 2VM0 1 VERSN REVDAT 4 29-SEP-09 2VM0 1 REMARK HET HETNAM HETSYN REVDAT 4 2 1 FORMUL LINK SITE HETATM REVDAT 4 3 1 CONECT MASTER REVDAT 3 24-FEB-09 2VM0 1 VERSN REVDAT 2 01-APR-08 2VM0 1 REMARK LINK HETATM REVDAT 1 29-JAN-08 2VM0 0 JRNL AUTH H.-P.HERSLETH,Y.HSIAO,U.RYDE,C.H.GORBITZ,K.K.ANDERSSON JRNL TITL THE CRYSTAL STRUCTURE OF PEROXYMYOGLOBIN GENERATED THROUGH JRNL TITL 2 CRYORADIOLYTIC REDUCTION OF MYOGLOBIN COMPOUND III DURING JRNL TITL 3 DATA COLLECTION. JRNL REF BIOCHEM.J. V. 412 257 2008 JRNL REFN ISSN 0264-6021 JRNL PMID 18215120 JRNL DOI 10.1042/BJ20070921 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.-P.HERSLETH,B.DALHUS,C.H.GORBITZ,K.K.ANDERSSON REMARK 1 TITL AN IRON HYDROXIDE MOIETY IN THE 1.35 A RESOLUTION STRUCTURE REMARK 1 TITL 2 OF HYDROGEN PEROXIDE DERIVED MYOGLOBIN COMPOUND II AT PH 5.2 REMARK 1 REF J.BIOL.INORG.CHEM. V. 7 299 2002 REMARK 1 REFN ISSN 0949-8257 REMARK 1 PMID 11935353 REMARK 1 DOI 10.1007/S007750100296 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 15724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 801 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1134 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1970 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.2210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1199 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : 0.08000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.23000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.058 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1371 ; 0.054 ; 0.054 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1827 ; 1.239 ; 2.004 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 165 ; 4.453 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 54 ;35.593 ;25.185 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 244 ;13.517 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;16.568 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 190 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1005 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 705 ; 0.208 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 916 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 129 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 65 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.180 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 819 ; 0.764 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1275 ; 1.207 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 603 ; 2.017 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 552 ; 3.116 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THIS STRUCTURE IS THIRD OF THREE DATASETS COLLECTED REMARK 3 ON THE SAME CRYSTAL AS 2VLY AND 2VLZ. REMARK 4 REMARK 4 2VM0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1290035074. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16542 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 34.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.730 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.08 REMARK 200 R MERGE FOR SHELL (I) : 0.43000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1GJN REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 17.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BATCH METHOD: 6-12 MG/ML MYOGLOBIN, 80 REMARK 280 -85% OF THE CRYSTALLIZATION STOCK-SOLUTION (3.9 M AMMONIUM REMARK 280 SULPHATE, 0.1 M MOPS, 5-10% OF GLYCEROL PH 6.8) REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 14.36500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 20 75.19 -153.11 REMARK 500 ASP A 20 76.94 -153.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A1154 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 93 NE2 REMARK 620 2 HEM A1154 NA 91.0 REMARK 620 3 HEM A1154 NB 87.6 90.3 REMARK 620 4 HEM A1154 NC 88.7 177.6 87.3 REMARK 620 5 HEM A1154 ND 91.2 90.4 178.7 92.0 REMARK 620 6 OH A1155 O 171.5 97.5 93.1 82.8 87.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 1154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OH A 1155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1156 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1157 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1158 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEO A 1159 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEO A 1160 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEO A 1161 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AZI RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) RECOMBINANT WILD-TYPE COMPLEXED WITH AZIDE REMARK 900 RELATED ID: 1DWR RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) WILD-TYPE COMPLEXED WITH CO REMARK 900 RELATED ID: 1DWT RELATED DB: PDB REMARK 900 PHOTORELAXED HORSE HEART MYOGLOBIN CO COMPLEX REMARK 900 RELATED ID: 1GJN RELATED DB: PDB REMARK 900 HYDROGEN PEROXIDE DERIVED MYOGLOBIN COMPOUND II AT PH 5.2 REMARK 900 RELATED ID: 1HRM RELATED DB: PDB REMARK 900 MYOGLOBIN MUTANT WITH HIS 93 REPLACED BY TYR (H93Y) REMARK 900 RELATED ID: 1NPF RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) WILD-TYPE COMPLEXED WITH NITRICOXIDE REMARK 900 RELATED ID: 1NPG RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) WILD-TYPE COMPLEXED WITHNITROSOETHANE REMARK 900 RELATED ID: 1NZ2 RELATED DB: PDB REMARK 900 K45E VARIANT OF HORSE HEART MYOGLOBIN REMARK 900 RELATED ID: 1NZ3 RELATED DB: PDB REMARK 900 K45E-K63E VARIANT OF HORSE HEART MYOGLOBIN REMARK 900 RELATED ID: 1RSE RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) MUTANT WITH SER 92 REPLACED BY ASP (S92D) REMARK 900 RELATED ID: 1YMA RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) MUTANT WITH HIS 64 REPLACED BY TYR (H64Y) REMARK 900 RELATED ID: 1YMB RELATED DB: PDB REMARK 900 METMYOGLOBIN (HORSE HEART) REMARK 900 RELATED ID: 2FRF RELATED DB: PDB REMARK 900 HORSE HEART MYOGLOBIN, NITRITE ADDUCT, CRYSTAL SOAK REMARK 900 RELATED ID: 2FRJ RELATED DB: PDB REMARK 900 NITROSYL HORSE HEART MYOGLOBIN, NITRITE/ DITHIONITE METHOD REMARK 900 RELATED ID: 2FRK RELATED DB: PDB REMARK 900 NITROSYL HORSE HEART MYOGLOBIN, NITRIC OXIDE GAS METHOD REMARK 900 RELATED ID: 2IN4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYOGLOBIN WITH CHARGE NEUTRALIZED HEME, ZNDMB- REMARK 900 DME REMARK 900 RELATED ID: 2V1E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RADIATION-INDUCED MYOGLOBIN COMPOUND II - REMARK 900 INTERMEDIATE H AT PH 6.8 REMARK 900 RELATED ID: 2V1F RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RADIATION-INDUCED MYOGLOBIN COMPOUND II - REMARK 900 INTERMEDIATE H AT PH 8.7 REMARK 900 RELATED ID: 2V1G RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RADIATION-INDUCED MYOGLOBIN COMPOUND II - REMARK 900 INTERMEDIATE H AT PH 5.2 REMARK 900 RELATED ID: 2V1H RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RADIATION-INDUCED METMYOGLOBIN - AQUA FERROUS REMARK 900 MYOGLOBIN AT PH 5.2 REMARK 900 RELATED ID: 2V1I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RADIATION-INDUCED METMYOGLOBIN - AQUA FERROUS REMARK 900 MYOGLOBIN AT PH 6.8 REMARK 900 RELATED ID: 2V1J RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RADIATION-INDUCED METMYOGLOBIN - AQUA FERROUS REMARK 900 MYOGLOBIN AT PH 8.7 REMARK 900 RELATED ID: 1BJE RELATED DB: PDB REMARK 900 H64T VARIANT OF MYOGLOBIN (HORSE HEART) RECOMBINANT WILD- TYPE REMARK 900 COMPLEXED WITH AZIDE REMARK 900 RELATED ID: 1DWS RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) WILD-TYPE COMPLEXED WITH CO REMARK 900 RELATED ID: 1HSY RELATED DB: PDB REMARK 900 MYOGLOBIN MUTANT WITH HIS 64 REPLACED BY THR (H64T) REMARK 900 RELATED ID: 1NZ4 RELATED DB: PDB REMARK 900 THE HORSE HEART MYOGLOBIN VARIANT K45E/K63E COMPLEXED WITHCADMIUM REMARK 900 RELATED ID: 1NZ5 RELATED DB: PDB REMARK 900 THE HORSE HEART MYOGLOBIN VARIANT K45E/K63E COMPLEXED WITHMANGANESE REMARK 900 RELATED ID: 1WLA RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) RECOMBINANT WILD-TYPE REMARK 900 RELATED ID: 1XCH RELATED DB: PDB REMARK 900 MYOGLOBIN (HORSE HEART) MUTANT WITH LEU 104 REPLACED BY ASN (L104N) REMARK 900 RELATED ID: 1YMC RELATED DB: PDB REMARK 900 CYANOMET-SULFMYOGLOBIN (HORSE HEART) REMARK 900 RELATED ID: 2FRI RELATED DB: PDB REMARK 900 HORSE HEART MYOGLOBIN, NITRITE ADDUCT, CO- CRYSTALLIZED REMARK 900 RELATED ID: 2V1K RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FERROUS DEOXYMYOGLOBIN AT PH 6.8 REMARK 900 RELATED ID: 2VLX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PEROXYMYOGLOBIN GENERATED BY CRYORADIOLYTIC REMARK 900 REDUCTION OF MYOGLOBIN COMPOUND III REMARK 900 RELATED ID: 2VLY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MYOGLOBIN COMPOUND III ( RADIATION- INDUCED) REMARK 900 RELATED ID: 2VLZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PEROXYMYOGLOBIN GENERATED BY CRYORADIOLYTIC REMARK 900 REDUCTION OF MYOGLOBIN COMPOUND III DBREF 2VM0 A 1 153 UNP P68082 MYG_HORSE 2 154 SEQRES 1 A 153 GLY LEU SER ASP GLY GLU TRP GLN GLN VAL LEU ASN VAL SEQRES 2 A 153 TRP GLY LYS VAL GLU ALA ASP ILE ALA GLY HIS GLY GLN SEQRES 3 A 153 GLU VAL LEU ILE ARG LEU PHE THR GLY HIS PRO GLU THR SEQRES 4 A 153 LEU GLU LYS PHE ASP LYS PHE LYS HIS LEU LYS THR GLU SEQRES 5 A 153 ALA GLU MET LYS ALA SER GLU ASP LEU LYS LYS HIS GLY SEQRES 6 A 153 THR VAL VAL LEU THR ALA LEU GLY GLY ILE LEU LYS LYS SEQRES 7 A 153 LYS GLY HIS HIS GLU ALA GLU LEU LYS PRO LEU ALA GLN SEQRES 8 A 153 SER HIS ALA THR LYS HIS LYS ILE PRO ILE LYS TYR LEU SEQRES 9 A 153 GLU PHE ILE SER ASP ALA ILE ILE HIS VAL LEU HIS SER SEQRES 10 A 153 LYS HIS PRO GLY ASP PHE GLY ALA ASP ALA GLN GLY ALA SEQRES 11 A 153 MET THR LYS ALA LEU GLU LEU PHE ARG ASN ASP ILE ALA SEQRES 12 A 153 ALA LYS TYR LYS GLU LEU GLY PHE GLN GLY HET HEM A1154 43 HET OH A1155 1 HET SO4 A1156 5 HET SO4 A1157 5 HET GOL A1158 6 HET PEO A1159 2 HET PEO A1160 2 HET PEO A1161 2 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM OH HYDROXIDE ION HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM PEO HYDROGEN PEROXIDE HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 OH H O 1- FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 GOL C3 H8 O3 FORMUL 7 PEO 3(H2 O2) FORMUL 10 HOH *160(H2 O) HELIX 1 1 SER A 3 ALA A 19 1 17 HELIX 2 2 ASP A 20 HIS A 36 1 17 HELIX 3 3 HIS A 36 GLU A 41 1 6 HELIX 4 4 THR A 51 SER A 58 1 8 HELIX 5 5 SER A 58 LYS A 77 1 20 HELIX 6 6 HIS A 82 LYS A 96 1 15 HELIX 7 7 PRO A 100 HIS A 119 1 20 HELIX 8 8 GLY A 124 GLY A 150 1 27 LINK NE2 HIS A 93 FE HEM A1154 1555 1555 2.11 LINK FE HEM A1154 O OH A1155 1555 1555 2.02 SITE 1 AC1 23 THR A 39 LYS A 42 PHE A 43 LYS A 45 SITE 2 AC1 23 VAL A 68 LEU A 89 SER A 92 HIS A 93 SITE 3 AC1 23 HIS A 97 ILE A 99 TYR A 103 LEU A 104 SITE 4 AC1 23 HIS A 113 HIS A 116 GLN A 128 PHE A 138 SITE 5 AC1 23 OH A1155 HOH A2145 HOH A2146 HOH A2147 SITE 6 AC1 23 HOH A2148 HOH A2149 HOH A2150 SITE 1 AC2 3 HIS A 64 VAL A 68 HEM A1154 SITE 1 AC3 4 THR A 51 GLU A 52 HOH A2065 HOH A2152 SITE 1 AC4 4 GLY A 1 HOH A2153 HOH A2154 HOH A2155 SITE 1 AC5 9 ARG A 31 HIS A 36 LYS A 96 ASP A 109 SITE 2 AC5 9 ALA A 110 HOH A2156 HOH A2157 HOH A2158 SITE 3 AC5 9 HOH A2159 SITE 1 AC6 3 GLY A 1 LEU A 2 TRP A 7 SITE 1 AC7 3 GLU A 59 LYS A 62 LYS A 63 SITE 1 AC8 3 LYS A 16 HIS A 24 HIS A 119 CRYST1 63.723 28.730 35.383 90.00 105.78 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015693 0.000000 0.004435 0.00000 SCALE2 0.000000 0.034807 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029369 0.00000