HEADER TRANSPORT PROTEIN 25-JAN-08 2VMB TITLE THE THREE-DIMENSIONAL STRUCTURE OF THE CYTOPLASMIC DOMAINS OF EPSF TITLE 2 FROM THE TYPE 2 SECRETION SYSTEM OF VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL SECRETION PATHWAY PROTEIN F; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 56-170; COMPND 5 SYNONYM: CHOLERA TOXIN SECRETION PROTEIN EPSF, EPSF; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: RESIDUES 56-170, PLUS C-TERMINAL TEV- CLEAVABLE HIS6- COMPND 8 TAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: N; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PACYC-CT KEYWDS TRANSMEMBRANE, INNER MEMBRANE, TYPE 2 SECRETION, T4PB, T2SS, VIBRIO, KEYWDS 2 CHOLERA, MEMBRANE, TRANSPORT, PROTEIN SECRETION, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.ABENDROTH,K.V.KOROTKOV,D.D.MITCHELL,A.KREGER,W.G.J.HOL REVDAT 6 08-MAY-24 2VMB 1 REMARK LINK REVDAT 5 28-JUN-17 2VMB 1 REMARK REVDAT 4 13-JUL-11 2VMB 1 VERSN REVDAT 3 12-MAY-09 2VMB 1 JRNL REMARK REVDAT 2 07-APR-09 2VMB 1 JRNL REVDAT 1 10-FEB-09 2VMB 0 JRNL AUTH J.ABENDROTH,D.D.MITCHELL,K.V.KOROTKOV,T.L.JOHNSON,A.KREGER, JRNL AUTH 2 M.SANDKVIST,W.G.HOL JRNL TITL THE THREE-DIMENSIONAL STRUCTURE OF THE CYTOPLASMIC DOMAINS JRNL TITL 2 OF EPSF FROM THE TYPE 2 SECRETION SYSTEM OF VIBRIO CHOLERAE. JRNL REF J.STRUCT.BIOL. V. 166 303 2009 JRNL REFN ISSN 1047-8477 JRNL PMID 19324092 JRNL DOI 10.1016/J.JSB.2009.03.009 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 15530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 834 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 683 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 55.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : 42 REMARK 3 BIN FREE R VALUE : 0.4110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1851 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 207 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : 0.87000 REMARK 3 B33 (A**2) : -1.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.210 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.188 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.112 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.203 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1921 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1344 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2596 ; 1.130 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3275 ; 0.975 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 248 ; 4.121 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;28.888 ;23.556 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 361 ;12.820 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;18.157 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 294 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2145 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 390 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 457 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1333 ; 0.183 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 965 ; 0.163 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 961 ; 0.079 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 150 ; 0.157 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.246 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 71 ; 0.234 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 23 ; 0.294 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1271 ; 0.558 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1925 ; 0.769 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 758 ; 1.542 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 665 ; 2.249 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 122 6 REMARK 3 1 B 1 B 122 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 738 ; 0.43 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 738 ; 0.77 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 56 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): 23.4160 24.2770 31.4312 REMARK 3 T TENSOR REMARK 3 T11: -0.0339 T22: -0.0015 REMARK 3 T33: -0.1168 T12: -0.0070 REMARK 3 T13: -0.0008 T23: -0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.9278 L22: 11.3604 REMARK 3 L33: 32.0496 L12: -1.9720 REMARK 3 L13: -3.1448 L23: 19.0675 REMARK 3 S TENSOR REMARK 3 S11: 0.2151 S12: 0.4354 S13: -0.2259 REMARK 3 S21: -0.6360 S22: -0.3471 S23: 0.0618 REMARK 3 S31: -0.7565 S32: -0.2837 S33: 0.1320 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 84 REMARK 3 ORIGIN FOR THE GROUP (A): 23.4469 24.8055 54.1484 REMARK 3 T TENSOR REMARK 3 T11: -0.1810 T22: -0.1139 REMARK 3 T33: -0.1792 T12: 0.0165 REMARK 3 T13: 0.0072 T23: -0.0346 REMARK 3 L TENSOR REMARK 3 L11: 3.0600 L22: 5.3596 REMARK 3 L33: 10.1605 L12: -1.5359 REMARK 3 L13: 1.6595 L23: -4.5713 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: -0.2591 S13: 0.0122 REMARK 3 S21: 0.0720 S22: 0.1862 S23: 0.0268 REMARK 3 S31: 0.2167 S32: 0.1323 S33: -0.1759 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 85 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0957 14.6645 54.0577 REMARK 3 T TENSOR REMARK 3 T11: -0.0483 T22: -0.1546 REMARK 3 T33: -0.1321 T12: -0.0102 REMARK 3 T13: -0.0070 T23: 0.0726 REMARK 3 L TENSOR REMARK 3 L11: 32.4331 L22: 11.4051 REMARK 3 L33: 23.0602 L12: -11.2155 REMARK 3 L13: 12.4038 L23: 2.3548 REMARK 3 S TENSOR REMARK 3 S11: 0.5094 S12: -0.4906 S13: -1.6085 REMARK 3 S21: 0.6873 S22: -0.0683 S23: 0.4163 REMARK 3 S31: 1.2931 S32: -0.2904 S33: -0.4411 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 13.6606 22.1192 46.5846 REMARK 3 T TENSOR REMARK 3 T11: -0.1450 T22: -0.1208 REMARK 3 T33: -0.1643 T12: -0.0144 REMARK 3 T13: -0.0167 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 7.0758 L22: 1.1324 REMARK 3 L33: 19.4826 L12: -1.6054 REMARK 3 L13: 4.3943 L23: 2.5904 REMARK 3 S TENSOR REMARK 3 S11: -0.1450 S12: 0.3013 S13: -0.0870 REMARK 3 S21: 0.1908 S22: -0.0417 S23: 0.0571 REMARK 3 S31: -0.3629 S32: -0.5264 S33: 0.1867 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4078 18.9207 41.5429 REMARK 3 T TENSOR REMARK 3 T11: -0.0853 T22: -0.1070 REMARK 3 T33: -0.1681 T12: -0.0580 REMARK 3 T13: 0.0022 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 15.1395 L22: 22.9937 REMARK 3 L33: 10.0577 L12: -5.5373 REMARK 3 L13: 10.9501 L23: -9.6858 REMARK 3 S TENSOR REMARK 3 S11: -0.4212 S12: 0.3212 S13: 0.2359 REMARK 3 S21: -0.1577 S22: 0.1085 S23: 0.8255 REMARK 3 S31: -0.1934 S32: 0.0671 S33: 0.3127 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 107 A 116 REMARK 3 ORIGIN FOR THE GROUP (A): 25.8223 9.4149 47.2035 REMARK 3 T TENSOR REMARK 3 T11: 0.0037 T22: -0.1561 REMARK 3 T33: -0.0472 T12: 0.0465 REMARK 3 T13: 0.0753 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 20.5973 L22: 10.1066 REMARK 3 L33: 9.2867 L12: -1.0282 REMARK 3 L13: 13.4468 L23: -2.9317 REMARK 3 S TENSOR REMARK 3 S11: -0.1267 S12: 0.4753 S13: -0.9100 REMARK 3 S21: -0.1821 S22: -0.0517 S23: -0.7553 REMARK 3 S31: 0.9355 S32: 0.3882 S33: 0.1784 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 117 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): 32.6984 14.8557 46.9602 REMARK 3 T TENSOR REMARK 3 T11: 0.0010 T22: -0.0294 REMARK 3 T33: -0.0088 T12: 0.0014 REMARK 3 T13: 0.1538 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 27.3614 L22: 2.7317 REMARK 3 L33: 10.5286 L12: -1.4747 REMARK 3 L13: 16.2625 L23: -2.3893 REMARK 3 S TENSOR REMARK 3 S11: -0.2434 S12: -1.3720 S13: -1.0817 REMARK 3 S21: -1.1507 S22: 0.5861 S23: -0.8788 REMARK 3 S31: 0.2667 S32: 0.4846 S33: -0.3426 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): 31.9017 21.1722 41.5789 REMARK 3 T TENSOR REMARK 3 T11: -0.0918 T22: -0.1215 REMARK 3 T33: -0.0940 T12: -0.0056 REMARK 3 T13: 0.0533 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 7.7852 L22: 1.3767 REMARK 3 L33: 7.1562 L12: 0.0938 REMARK 3 L13: 3.4039 L23: -1.1911 REMARK 3 S TENSOR REMARK 3 S11: -0.3238 S12: 0.3771 S13: -0.1669 REMARK 3 S21: -0.4121 S22: 0.1981 S23: -0.2417 REMARK 3 S31: -0.1551 S32: 0.2686 S33: 0.1258 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7062 24.5800 54.0621 REMARK 3 T TENSOR REMARK 3 T11: -0.1387 T22: -0.0358 REMARK 3 T33: -0.0901 T12: -0.0041 REMARK 3 T13: -0.0258 T23: 0.0223 REMARK 3 L TENSOR REMARK 3 L11: 9.2655 L22: 18.3034 REMARK 3 L33: 6.3869 L12: -11.1702 REMARK 3 L13: 3.5430 L23: -7.6925 REMARK 3 S TENSOR REMARK 3 S11: -0.1683 S12: -0.4749 S13: 0.0307 REMARK 3 S21: 0.2451 S22: -0.1195 S23: -0.5931 REMARK 3 S31: 0.1334 S32: 0.4464 S33: 0.2879 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 156 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3309 36.4797 44.5880 REMARK 3 T TENSOR REMARK 3 T11: -0.1370 T22: -0.1333 REMARK 3 T33: -0.1374 T12: -0.0253 REMARK 3 T13: 0.0332 T23: -0.0622 REMARK 3 L TENSOR REMARK 3 L11: 8.2310 L22: 23.4750 REMARK 3 L33: 31.5993 L12: -2.3840 REMARK 3 L13: 6.9945 L23: -26.2033 REMARK 3 S TENSOR REMARK 3 S11: 0.1447 S12: 0.0124 S13: 0.1147 REMARK 3 S21: 0.0671 S22: -0.1238 S23: -0.2594 REMARK 3 S31: -0.2934 S32: 0.1094 S33: -0.0209 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 164 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 23.6828 41.7826 36.9479 REMARK 3 T TENSOR REMARK 3 T11: -0.0826 T22: -0.1699 REMARK 3 T33: -0.0816 T12: -0.0204 REMARK 3 T13: 0.0808 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 45.7077 L22: 39.4975 REMARK 3 L33: 41.5881 L12: -8.6648 REMARK 3 L13: 9.0531 L23: -37.5647 REMARK 3 S TENSOR REMARK 3 S11: 0.6558 S12: -0.2445 S13: -1.2058 REMARK 3 S21: -0.4952 S22: -0.4593 S23: -0.3275 REMARK 3 S31: 0.7081 S32: -0.2601 S33: -0.1964 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 170 A 176 REMARK 3 ORIGIN FOR THE GROUP (A): 18.7516 47.5717 29.0147 REMARK 3 T TENSOR REMARK 3 T11: -0.0854 T22: 0.0451 REMARK 3 T33: 0.0541 T12: -0.0211 REMARK 3 T13: -0.0140 T23: 0.1110 REMARK 3 L TENSOR REMARK 3 L11: 17.6276 L22: 15.4225 REMARK 3 L33: 43.3068 L12: -13.9579 REMARK 3 L13: 5.3141 L23: -10.9216 REMARK 3 S TENSOR REMARK 3 S11: 0.4060 S12: 0.3290 S13: -0.2708 REMARK 3 S21: -0.7095 S22: -0.0171 S23: 1.4480 REMARK 3 S31: 1.1726 S32: -1.5601 S33: -0.3889 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 62 B 76 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1140 37.2848 56.6585 REMARK 3 T TENSOR REMARK 3 T11: -0.1004 T22: -0.1040 REMARK 3 T33: -0.1383 T12: -0.0029 REMARK 3 T13: 0.0196 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 7.6042 L22: 15.8985 REMARK 3 L33: 5.4226 L12: 3.2404 REMARK 3 L13: -0.7742 L23: -2.2154 REMARK 3 S TENSOR REMARK 3 S11: 0.0809 S12: 0.0987 S13: 0.7643 REMARK 3 S21: 0.4914 S22: 0.0710 S23: 0.0763 REMARK 3 S31: -0.7552 S32: 0.2552 S33: -0.1519 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 77 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): 14.6488 23.0039 60.1195 REMARK 3 T TENSOR REMARK 3 T11: -0.1064 T22: -0.1282 REMARK 3 T33: -0.1861 T12: 0.0091 REMARK 3 T13: 0.0150 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 10.7578 L22: 24.9119 REMARK 3 L33: 23.5213 L12: 4.9644 REMARK 3 L13: -4.3716 L23: -10.8828 REMARK 3 S TENSOR REMARK 3 S11: -0.1563 S12: -0.1722 S13: -0.6596 REMARK 3 S21: -0.1372 S22: 0.1386 S23: -0.2216 REMARK 3 S31: 0.5053 S32: 0.0453 S33: 0.0177 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 84 B 91 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8479 26.0937 68.5326 REMARK 3 T TENSOR REMARK 3 T11: 0.0053 T22: -0.0138 REMARK 3 T33: -0.1632 T12: 0.0629 REMARK 3 T13: -0.0080 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 37.5236 L22: 6.5476 REMARK 3 L33: 7.7630 L12: 11.7830 REMARK 3 L13: -7.0488 L23: -4.9144 REMARK 3 S TENSOR REMARK 3 S11: 0.1115 S12: -1.8100 S13: -1.1548 REMARK 3 S21: 0.9366 S22: -0.2930 S23: -0.3968 REMARK 3 S31: 0.6190 S32: 0.5969 S33: 0.1815 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 92 B 97 REMARK 3 ORIGIN FOR THE GROUP (A): 25.4136 33.2140 62.8401 REMARK 3 T TENSOR REMARK 3 T11: -0.0606 T22: 0.0104 REMARK 3 T33: -0.1652 T12: -0.0093 REMARK 3 T13: -0.0417 T23: -0.0964 REMARK 3 L TENSOR REMARK 3 L11: 24.4192 L22: 14.9214 REMARK 3 L33: 9.4774 L12: 11.9953 REMARK 3 L13: -8.5726 L23: 3.0605 REMARK 3 S TENSOR REMARK 3 S11: 0.0490 S12: -0.2061 S13: 0.3323 REMARK 3 S21: 0.5364 S22: 0.1755 S23: -0.4477 REMARK 3 S31: -0.0004 S32: 0.9254 S33: -0.2245 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 98 B 112 REMARK 3 ORIGIN FOR THE GROUP (A): 20.3217 37.8449 68.9349 REMARK 3 T TENSOR REMARK 3 T11: -0.0977 T22: -0.0798 REMARK 3 T33: -0.1774 T12: 0.0081 REMARK 3 T13: -0.0370 T23: -0.0674 REMARK 3 L TENSOR REMARK 3 L11: 11.7421 L22: 13.2444 REMARK 3 L33: 9.2921 L12: 9.9119 REMARK 3 L13: -5.3385 L23: -4.9240 REMARK 3 S TENSOR REMARK 3 S11: -0.1716 S12: 0.0534 S13: 0.2068 REMARK 3 S21: 0.0574 S22: 0.3148 S23: -0.4471 REMARK 3 S31: -0.2572 S32: 0.3088 S33: -0.1432 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 113 B 118 REMARK 3 ORIGIN FOR THE GROUP (A): 9.6469 31.9615 75.1889 REMARK 3 T TENSOR REMARK 3 T11: -0.0907 T22: -0.0294 REMARK 3 T33: -0.1818 T12: -0.0280 REMARK 3 T13: 0.0113 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.2501 L22: 9.2678 REMARK 3 L33: 11.7602 L12: -4.8299 REMARK 3 L13: -0.2117 L23: -4.6403 REMARK 3 S TENSOR REMARK 3 S11: -0.0400 S12: -0.4020 S13: -0.2095 REMARK 3 S21: 0.3605 S22: 0.0730 S23: -0.1903 REMARK 3 S31: 0.0015 S32: 0.1815 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 119 B 130 REMARK 3 ORIGIN FOR THE GROUP (A): 10.0423 41.5489 67.1498 REMARK 3 T TENSOR REMARK 3 T11: -0.0547 T22: -0.0354 REMARK 3 T33: -0.1277 T12: 0.0184 REMARK 3 T13: -0.0148 T23: -0.0335 REMARK 3 L TENSOR REMARK 3 L11: 9.7243 L22: 6.0648 REMARK 3 L33: 0.5212 L12: 2.6196 REMARK 3 L13: 1.1413 L23: 1.7480 REMARK 3 S TENSOR REMARK 3 S11: 0.0918 S12: -0.3610 S13: 0.5356 REMARK 3 S21: 0.2872 S22: -0.0141 S23: -0.0612 REMARK 3 S31: -0.2288 S32: 0.0414 S33: -0.0777 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 131 B 140 REMARK 3 ORIGIN FOR THE GROUP (A): 3.4031 37.8272 62.3444 REMARK 3 T TENSOR REMARK 3 T11: -0.0895 T22: -0.0766 REMARK 3 T33: -0.1604 T12: 0.0263 REMARK 3 T13: -0.0324 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 9.1207 L22: 12.9111 REMARK 3 L33: 8.1673 L12: 3.6409 REMARK 3 L13: -0.5206 L23: -5.5148 REMARK 3 S TENSOR REMARK 3 S11: -0.2418 S12: -0.0248 S13: 0.4740 REMARK 3 S21: -0.2964 S22: 0.3712 S23: 0.5028 REMARK 3 S31: -0.4703 S32: -0.4178 S33: -0.1294 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 141 B 157 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9255 30.1311 58.2408 REMARK 3 T TENSOR REMARK 3 T11: -0.1437 T22: -0.0292 REMARK 3 T33: -0.1134 T12: -0.0190 REMARK 3 T13: -0.0523 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 6.3886 L22: 6.5128 REMARK 3 L33: 13.7276 L12: 5.5624 REMARK 3 L13: -7.7849 L23: -5.7655 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: 0.0738 S13: 0.0203 REMARK 3 S21: -0.1218 S22: 0.1907 S23: 0.3861 REMARK 3 S31: 0.6703 S32: -0.6432 S33: -0.1945 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 158 B 164 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6370 42.0158 47.7909 REMARK 3 T TENSOR REMARK 3 T11: -0.0783 T22: -0.0917 REMARK 3 T33: -0.1627 T12: 0.0418 REMARK 3 T13: 0.0138 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 4.3944 L22: 72.9884 REMARK 3 L33: 14.3827 L12: 9.9041 REMARK 3 L13: -1.7564 L23: -10.6325 REMARK 3 S TENSOR REMARK 3 S11: 0.1304 S12: 0.0815 S13: 0.4855 REMARK 3 S21: 0.9916 S22: 0.1257 S23: 0.4582 REMARK 3 S31: 0.7089 S32: -0.1508 S33: -0.2560 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 165 B 169 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4737 47.8449 42.5947 REMARK 3 T TENSOR REMARK 3 T11: -0.0710 T22: -0.0730 REMARK 3 T33: -0.1090 T12: 0.0593 REMARK 3 T13: 0.0150 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 32.0484 L22: 43.4613 REMARK 3 L33: 29.3253 L12: 14.1895 REMARK 3 L13: -15.9075 L23: -27.2741 REMARK 3 S TENSOR REMARK 3 S11: -0.0357 S12: -0.0380 S13: -0.3703 REMARK 3 S21: 0.1263 S22: -0.4740 S23: -1.2357 REMARK 3 S31: 0.7832 S32: -0.1974 S33: 0.5097 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 170 B 176 REMARK 3 ORIGIN FOR THE GROUP (A): 20.0551 56.5188 39.2921 REMARK 3 T TENSOR REMARK 3 T11: -0.0550 T22: 0.0388 REMARK 3 T33: 0.1008 T12: -0.0483 REMARK 3 T13: -0.0232 T23: 0.1218 REMARK 3 L TENSOR REMARK 3 L11: 13.2757 L22: 36.9556 REMARK 3 L33: 4.5954 L12: 10.1137 REMARK 3 L13: -5.9617 L23: 2.9488 REMARK 3 S TENSOR REMARK 3 S11: -0.4135 S12: -0.3925 S13: -0.1115 REMARK 3 S21: 0.3260 S22: 0.4760 S23: -1.6997 REMARK 3 S31: -0.2148 S32: 1.2576 S33: -0.0624 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VMB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1290035109. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JAN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 2.0663 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16364 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 46.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 12.96 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 36.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.1 REMARK 200 DATA REDUNDANCY IN SHELL : 8.43 REMARK 200 R MERGE FOR SHELL (I) : 0.14000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, DM, ARP/WARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1UL PROTEIN, 1UL RESERVOIR: 12.5% PEG REMARK 280 400, 200MM CAOAC2, 100MM MES PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.59850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.53500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.91600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.53500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.59850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.91600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 55 REMARK 465 GLN A 177 REMARK 465 MET B 55 REMARK 465 GLY B 56 REMARK 465 PHE B 57 REMARK 465 ALA B 58 REMARK 465 PHE B 59 REMARK 465 LYS B 60 REMARK 465 ARG B 61 REMARK 465 GLN B 177 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS B 127 CA CB CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 67 O HOH A 2011 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2082 O HOH B 2058 3646 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1177 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 97 OE2 REMARK 620 2 HOH A2037 O 104.8 REMARK 620 3 HOH A2040 O 84.8 82.3 REMARK 620 4 GLU B 151 OE2 170.8 81.7 89.6 REMARK 620 5 ASP B 155 OD1 87.8 158.0 80.9 84.1 REMARK 620 6 ASP B 155 OD2 85.4 146.7 130.7 92.7 50.5 REMARK 620 7 HOH B2087 O 90.2 73.3 153.0 98.0 125.6 75.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1177 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 151 OE2 REMARK 620 2 ASP A 155 OD1 79.7 REMARK 620 3 ASP A 155 OD2 94.4 49.8 REMARK 620 4 HOH A2096 O 100.5 126.6 77.3 REMARK 620 5 GLU B 97 OE2 163.2 86.3 83.5 95.2 REMARK 620 6 HOH B2025 O 83.1 155.5 149.9 73.7 106.9 REMARK 620 7 HOH B2031 O 87.3 80.6 128.8 152.4 81.2 81.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 1177 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1177 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VMA RELATED DB: PDB REMARK 900 THE THREE-DIMENSIONAL STRUCTURE OF THE CYTOPLASMIC DOMAINS OF EPSF REMARK 900 FROM THE TYPE 2 SECRETION SYSTEM OF VIBRIO CHOLERAE REMARK 999 REMARK 999 SEQUENCE REMARK 999 CYTOPLASMIC DOMAIN, RESIDUES 56-171, PLUS C-TERMINAL TEV REMARK 999 CLEAVAGE SITE DBREF 2VMB A 55 55 PDB 2VMB 2VMB 55 55 DBREF 2VMB A 56 170 UNP P45780 GSPF_VIBCH 56 170 DBREF 2VMB A 171 177 PDB 2VMB 2VMB 171 177 DBREF 2VMB B 55 55 PDB 2VMB 2VMB 55 55 DBREF 2VMB B 56 170 UNP P45780 GSPF_VIBCH 56 170 DBREF 2VMB B 171 177 PDB 2VMB 2VMB 171 177 SEQRES 1 A 123 MET GLY PHE ALA PHE LYS ARG GLY ILE SER THR PRO ASP SEQRES 2 A 123 LEU ALA LEU ILE THR ARG GLN LEU ALA THR LEU VAL GLN SEQRES 3 A 123 SER GLY MET PRO LEU GLU GLU CYS LEU ARG ALA VAL ALA SEQRES 4 A 123 GLU GLN SER GLU LYS PRO ARG ILE ARG THR MET LEU VAL SEQRES 5 A 123 ALA VAL ARG ALA LYS VAL THR GLU GLY TYR THR LEU SER SEQRES 6 A 123 ASP SER LEU GLY ASP TYR PRO HIS VAL PHE ASP GLU LEU SEQRES 7 A 123 PHE ARG SER MET VAL ALA ALA GLY GLU LYS SER GLY HIS SEQRES 8 A 123 LEU ASP SER VAL LEU GLU ARG LEU ALA ASP TYR ALA GLU SEQRES 9 A 123 ASN ARG GLN LYS MET ARG SER LYS LEU GLN GLN ALA SER SEQRES 10 A 123 GLU ASN LEU TYR PHE GLN SEQRES 1 B 123 MET GLY PHE ALA PHE LYS ARG GLY ILE SER THR PRO ASP SEQRES 2 B 123 LEU ALA LEU ILE THR ARG GLN LEU ALA THR LEU VAL GLN SEQRES 3 B 123 SER GLY MET PRO LEU GLU GLU CYS LEU ARG ALA VAL ALA SEQRES 4 B 123 GLU GLN SER GLU LYS PRO ARG ILE ARG THR MET LEU VAL SEQRES 5 B 123 ALA VAL ARG ALA LYS VAL THR GLU GLY TYR THR LEU SER SEQRES 6 B 123 ASP SER LEU GLY ASP TYR PRO HIS VAL PHE ASP GLU LEU SEQRES 7 B 123 PHE ARG SER MET VAL ALA ALA GLY GLU LYS SER GLY HIS SEQRES 8 B 123 LEU ASP SER VAL LEU GLU ARG LEU ALA ASP TYR ALA GLU SEQRES 9 B 123 ASN ARG GLN LYS MET ARG SER LYS LEU GLN GLN ALA SER SEQRES 10 B 123 GLU ASN LEU TYR PHE GLN HET CA A1177 1 HET CA B1177 1 HETNAM CA CALCIUM ION FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *207(H2 O) HELIX 1 1 SER A 64 SER A 81 1 18 HELIX 2 2 PRO A 84 GLN A 95 1 12 HELIX 3 3 LYS A 98 GLU A 114 1 17 HELIX 4 4 THR A 117 GLY A 123 1 7 HELIX 5 5 ASP A 130 GLY A 144 1 15 HELIX 6 6 HIS A 145 PHE A 176 1 32 HELIX 7 7 SER B 64 SER B 81 1 18 HELIX 8 8 PRO B 84 SER B 96 1 13 HELIX 9 9 LYS B 98 GLU B 114 1 17 HELIX 10 10 THR B 117 GLY B 123 1 7 HELIX 11 11 ASP B 130 GLY B 144 1 15 HELIX 12 12 HIS B 145 PHE B 176 1 32 LINK OE2 GLU A 97 CA CA B1177 1555 1555 2.33 LINK OE2 GLU A 151 CA CA A1177 1555 1555 2.35 LINK OD1 ASP A 155 CA CA A1177 1555 1555 2.70 LINK OD2 ASP A 155 CA CA A1177 1555 1555 2.45 LINK CA CA A1177 O HOH A2096 1555 1555 2.41 LINK CA CA A1177 OE2 GLU B 97 1555 1555 2.33 LINK CA CA A1177 O HOH B2025 1555 1555 2.51 LINK CA CA A1177 O HOH B2031 1555 1555 2.46 LINK O HOH A2037 CA CA B1177 1555 1555 2.60 LINK O HOH A2040 CA CA B1177 1555 1555 2.37 LINK OE2 GLU B 151 CA CA B1177 1555 1555 2.32 LINK OD1 ASP B 155 CA CA B1177 1555 1555 2.66 LINK OD2 ASP B 155 CA CA B1177 1555 1555 2.45 LINK CA CA B1177 O HOH B2087 1555 1555 2.65 SITE 1 AC1 6 GLU A 97 HOH A2037 HOH A2040 GLU B 151 SITE 2 AC1 6 ASP B 155 HOH B2087 SITE 1 AC2 6 GLU A 151 ASP A 155 HOH A2096 GLU B 97 SITE 2 AC2 6 HOH B2025 HOH B2031 CRYST1 49.197 53.832 89.070 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020326 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018576 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011227 0.00000 MTRIX1 1 -0.999810 -0.006950 -0.018030 40.14479 1 MTRIX2 1 0.016760 0.152090 -0.988230 77.84767 1 MTRIX3 1 0.009610 -0.988340 -0.151940 91.40726 1