data_2VPH # _entry.id 2VPH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VPH pdb_00002vph 10.2210/pdb2vph/pdb PDBE EBI-35498 ? ? WWPDB D_1290035498 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2CS5 _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'SOLUTION STRUCTURE OF PDZ DOMAIN OF PROTEIN TYROSINEPHOSPHATASE, NON-RECEPTOR TYPE 4' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VPH _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-02-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Roos, A.K.' 1 'Wang, J.' 2 'Burgess-Brown, N.' 3 'Elkins, J.M.' 4 'Kavanagh, K.' 5 'Pike, A.C.W.' 6 'Filippakopoulos, P.' 7 'Arrowsmith, C.H.' 8 'Weigelt, J.' 9 'Edwards, A.' 10 'von Delft, F.' 11 'Bountra, C.' 12 'Knapp, S.' 13 # _citation.id primary _citation.title 'Crystal Structure of the Human Protein Tyrosine Phosphatase, Non-Receptor Type 4, Pdz Domain' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Roos, A.K.' 1 ? primary 'Wang, J.' 2 ? primary 'Burgess-Brown, N.' 3 ? primary 'Elkins, J.M.' 4 ? primary 'Kavanagh, K.' 5 ? primary 'Pike, A.C.W.' 6 ? primary 'Filippakopoulos, P.' 7 ? primary 'Arrowsmith, C.H.' 8 ? primary 'Weigelt, J.' 9 ? primary 'Edwards, A.' 10 ? primary 'von Delft, F.' 11 ? primary 'Bountra, C.' 12 ? primary 'Knapp, S.' 13 ? # _cell.entry_id 2VPH _cell.length_a 36.489 _cell.length_b 71.015 _cell.length_c 71.598 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VPH _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 4' 11040.697 2 3.1.3.48 ? 'PDZ DOMAIN, RESIDUES 513-606' ? 2 water nat water 18.015 72 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PROTEIN-TYROSINE PHOSPHATASE MEG1, PTPASE-MEG1, MEG' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC ERHSGELMLLVRPNAVESTV ; _entity_poly.pdbx_seq_one_letter_code_can ;SMDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC ERHSGELMLLVRPNAVESTV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASP n 1 4 ASN n 1 5 LEU n 1 6 VAL n 1 7 LEU n 1 8 ILE n 1 9 ARG n 1 10 MET n 1 11 LYS n 1 12 PRO n 1 13 ASP n 1 14 GLU n 1 15 ASN n 1 16 GLY n 1 17 ARG n 1 18 PHE n 1 19 GLY n 1 20 PHE n 1 21 ASN n 1 22 VAL n 1 23 LYS n 1 24 GLY n 1 25 GLY n 1 26 TYR n 1 27 ASP n 1 28 GLN n 1 29 LYS n 1 30 MET n 1 31 PRO n 1 32 VAL n 1 33 ILE n 1 34 VAL n 1 35 SER n 1 36 ARG n 1 37 VAL n 1 38 ALA n 1 39 PRO n 1 40 GLY n 1 41 THR n 1 42 PRO n 1 43 ALA n 1 44 ASP n 1 45 LEU n 1 46 CYS n 1 47 VAL n 1 48 PRO n 1 49 ARG n 1 50 LEU n 1 51 ASN n 1 52 GLU n 1 53 GLY n 1 54 ASP n 1 55 GLN n 1 56 VAL n 1 57 VAL n 1 58 LEU n 1 59 ILE n 1 60 ASN n 1 61 GLY n 1 62 ARG n 1 63 ASP n 1 64 ILE n 1 65 ALA n 1 66 GLU n 1 67 HIS n 1 68 THR n 1 69 HIS n 1 70 ASP n 1 71 GLN n 1 72 VAL n 1 73 VAL n 1 74 LEU n 1 75 PHE n 1 76 ILE n 1 77 LYS n 1 78 ALA n 1 79 SER n 1 80 CYS n 1 81 GLU n 1 82 ARG n 1 83 HIS n 1 84 SER n 1 85 GLY n 1 86 GLU n 1 87 LEU n 1 88 MET n 1 89 LEU n 1 90 LEU n 1 91 VAL n 1 92 ARG n 1 93 PRO n 1 94 ASN n 1 95 ALA n 1 96 VAL n 1 97 GLU n 1 98 SER n 1 99 THR n 1 100 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant R3-ROSETTA-PRARE2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PNIC28-BSA4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2VPH 1 ? ? 2VPH ? 2 UNP PTN4_HUMAN 1 ? ? P29074 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VPH A 1 ? 2 ? 2VPH -1 ? 0 ? -1 0 2 2 2VPH A 3 ? 96 ? P29074 513 ? 606 ? 513 606 3 1 2VPH A 97 ? 100 ? 2VPH 607 ? 610 ? 607 610 4 1 2VPH B 1 ? 2 ? 2VPH -1 ? 0 ? -1 0 5 2 2VPH B 3 ? 96 ? P29074 513 ? 606 ? 513 606 6 1 2VPH B 97 ? 100 ? 2VPH 607 ? 610 ? 607 610 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VPH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_percent_sol 40 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG 3350, 0.20M (NH4)2H(CIT), PH 5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2008-01-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98068 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 0.98068 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VPH _reflns.observed_criterion_sigma_I 2.8 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.90 _reflns.number_obs 15306 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.90 _reflns.B_iso_Wilson_estimate 30.50 _reflns.pdbx_redundancy 7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.59 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.80 _reflns_shell.pdbx_redundancy 6.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VPH _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 14492 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.00 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.210 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.243 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 765 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 27.32 _refine.aniso_B[1][1] 1.56000 _refine.aniso_B[2][2] -0.90000 _refine.aniso_B[3][3] -0.66000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRIES 2OCS, 2HE2, 1QAV' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.169 _refine.pdbx_overall_ESU_R_Free 0.151 _refine.overall_SU_ML 0.113 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.694 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1424 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 72 _refine_hist.number_atoms_total 1496 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 45.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.022 ? 1444 'X-RAY DIFFRACTION' ? r_bond_other_d 0.004 0.020 ? 949 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.448 1.980 ? 1963 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.921 3.000 ? 2327 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.414 5.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.526 24.603 ? 63 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.308 15.000 ? 233 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.304 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.080 0.200 ? 234 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1619 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 264 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.861 3.000 ? 945 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 4.235 5.000 ? 1522 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 5.889 8.000 ? 499 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 8.366 11.000 ? 441 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 491 0.15 0.50 'medium positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 491 0.15 0.50 'medium positional' 1 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 547 0.21 5.00 'loose positional' 1 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 547 0.21 5.00 'loose positional' 1 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 491 1.19 2.00 'medium thermal' 1 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 491 1.19 2.00 'medium thermal' 1 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 547 1.15 10.00 'loose thermal' 1 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 2 B 547 1.15 10.00 'loose thermal' 1 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.95 _refine_ls_shell.number_reflns_R_work 1059 _refine_ls_shell.R_factor_R_work 0.2550 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3470 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.992000 _struct_ncs_oper.matrix[1][2] 0.037000 _struct_ncs_oper.matrix[1][3] -0.117000 _struct_ncs_oper.matrix[2][1] 0.118000 _struct_ncs_oper.matrix[2][2] -0.022000 _struct_ncs_oper.matrix[2][3] 0.993000 _struct_ncs_oper.matrix[3][1] 0.034000 _struct_ncs_oper.matrix[3][2] -0.999000 _struct_ncs_oper.matrix[3][3] -0.027000 _struct_ncs_oper.vector[1] -8.44412 _struct_ncs_oper.vector[2] 15.43300 _struct_ncs_oper.vector[3] 17.89650 # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A LEU 5 . A ASP 44 . A LEU 515 A ASP 554 5 ? 1 2 1 B LEU 5 . B ASP 44 . B LEU 515 B ASP 554 5 ? 1 1 2 A CYS 46 . A ALA 78 . A CYS 556 A ALA 588 5 ? 1 2 2 B CYS 46 . B ALA 78 . B CYS 556 B ALA 588 5 ? 1 1 3 A GLU 86 . A GLU 97 . A GLU 596 A GLU 607 5 ? 1 2 3 B GLU 86 . B GLU 97 . B GLU 596 B GLU 607 5 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 2VPH _struct.title 'Crystal structure of the human protein tyrosine phosphatase, non- receptor type 4, PDZ domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VPH _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PROTEIN PHOSPHATASE, PTPN4, PTPMEG, HYDROLASE, CYTOSKELETON, MEGAKARYOCYTE, DEPHOSPHORYLATION, STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TYR A 26 ? LYS A 29 ? TYR A 536 LYS A 539 5 ? 4 HELX_P HELX_P2 2 THR A 41 ? CYS A 46 ? THR A 551 CYS A 556 1 ? 6 HELX_P HELX_P3 3 THR A 68 ? ALA A 78 ? THR A 578 ALA A 588 1 ? 11 HELX_P HELX_P4 4 SER A 79 ? ARG A 82 ? SER A 589 ARG A 592 5 ? 4 HELX_P HELX_P5 5 TYR B 26 ? LYS B 29 ? TYR B 536 LYS B 539 5 ? 4 HELX_P HELX_P6 6 THR B 41 ? CYS B 46 ? THR B 551 CYS B 556 1 ? 6 HELX_P HELX_P7 7 THR B 68 ? ALA B 78 ? THR B 578 ALA B 588 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 47 A . ? VAL 557 A PRO 48 A ? PRO 558 A 1 -3.06 2 VAL 47 B . ? VAL 557 B PRO 48 B ? PRO 558 B 1 -9.98 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 2 ? AC ? 3 ? BA ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 6 ? MET A 10 ? VAL A 516 MET A 520 AA 2 LEU A 87 ? ARG A 92 ? LEU A 597 ARG A 602 AA 3 GLN A 55 ? ILE A 59 ? GLN A 565 ILE A 569 AA 4 ARG A 62 ? ASP A 63 ? ARG A 572 ASP A 573 AB 1 PHE A 20 ? GLY A 25 ? PHE A 530 GLY A 535 AB 2 MET A 30 ? VAL A 37 ? MET A 540 VAL A 547 AC 1 GLU A 97 ? THR A 99 ? GLU A 607 THR A 609 AC 2 PHE B 20 ? GLY B 25 ? PHE B 530 GLY B 535 AC 3 MET B 30 ? VAL B 37 ? MET B 540 VAL B 547 BA 1 VAL B 6 ? MET B 10 ? VAL B 516 MET B 520 BA 2 LEU B 87 ? ARG B 92 ? LEU B 597 ARG B 602 BA 3 GLN B 55 ? ILE B 59 ? GLN B 565 ILE B 569 BA 4 ARG B 62 ? ASP B 63 ? ARG B 572 ASP B 573 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N MET A 10 ? N MET A 520 O LEU A 87 ? O LEU A 597 AA 2 3 N ARG A 92 ? N ARG A 602 O GLN A 55 ? O GLN A 565 AA 3 4 N ILE A 59 ? N ILE A 569 O ARG A 62 ? O ARG A 572 AB 1 2 N GLY A 25 ? N GLY A 535 O MET A 30 ? O MET A 540 AC 1 2 N SER A 98 ? N SER A 608 O VAL B 22 ? O VAL B 532 AC 2 3 N GLY B 25 ? N GLY B 535 O MET B 30 ? O MET B 540 BA 1 2 N MET B 10 ? N MET B 520 O LEU B 87 ? O LEU B 597 BA 2 3 N ARG B 92 ? N ARG B 602 O GLN B 55 ? O GLN B 565 BA 3 4 N ILE B 59 ? N ILE B 569 O ARG B 62 ? O ARG B 572 # _database_PDB_matrix.entry_id 2VPH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VPH _atom_sites.fract_transf_matrix[1][1] 0.027406 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014082 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013967 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 ? ? ? A . n A 1 2 MET 2 0 ? ? ? A . n A 1 3 ASP 3 513 513 ASP ASP A . n A 1 4 ASN 4 514 514 ASN ASN A . n A 1 5 LEU 5 515 515 LEU LEU A . n A 1 6 VAL 6 516 516 VAL VAL A . n A 1 7 LEU 7 517 517 LEU LEU A . n A 1 8 ILE 8 518 518 ILE ILE A . n A 1 9 ARG 9 519 519 ARG ARG A . n A 1 10 MET 10 520 520 MET MET A . n A 1 11 LYS 11 521 521 LYS LYS A . n A 1 12 PRO 12 522 522 PRO PRO A . n A 1 13 ASP 13 523 523 ASP ASP A . n A 1 14 GLU 14 524 524 GLU GLU A . n A 1 15 ASN 15 525 525 ASN ASN A . n A 1 16 GLY 16 526 526 GLY GLY A . n A 1 17 ARG 17 527 527 ARG ARG A . n A 1 18 PHE 18 528 528 PHE PHE A . n A 1 19 GLY 19 529 529 GLY GLY A . n A 1 20 PHE 20 530 530 PHE PHE A . n A 1 21 ASN 21 531 531 ASN ASN A . n A 1 22 VAL 22 532 532 VAL VAL A . n A 1 23 LYS 23 533 533 LYS LYS A . n A 1 24 GLY 24 534 534 GLY GLY A . n A 1 25 GLY 25 535 535 GLY GLY A . n A 1 26 TYR 26 536 536 TYR TYR A . n A 1 27 ASP 27 537 537 ASP ASP A . n A 1 28 GLN 28 538 538 GLN GLN A . n A 1 29 LYS 29 539 539 LYS LYS A . n A 1 30 MET 30 540 540 MET MET A . n A 1 31 PRO 31 541 541 PRO PRO A . n A 1 32 VAL 32 542 542 VAL VAL A . n A 1 33 ILE 33 543 543 ILE ILE A . n A 1 34 VAL 34 544 544 VAL VAL A . n A 1 35 SER 35 545 545 SER SER A . n A 1 36 ARG 36 546 546 ARG ARG A . n A 1 37 VAL 37 547 547 VAL VAL A . n A 1 38 ALA 38 548 548 ALA ALA A . n A 1 39 PRO 39 549 549 PRO PRO A . n A 1 40 GLY 40 550 550 GLY GLY A . n A 1 41 THR 41 551 551 THR THR A . n A 1 42 PRO 42 552 552 PRO PRO A . n A 1 43 ALA 43 553 553 ALA ALA A . n A 1 44 ASP 44 554 554 ASP ASP A . n A 1 45 LEU 45 555 555 LEU LEU A . n A 1 46 CYS 46 556 556 CYS CYS A . n A 1 47 VAL 47 557 557 VAL VAL A . n A 1 48 PRO 48 558 558 PRO PRO A . n A 1 49 ARG 49 559 559 ARG ARG A . n A 1 50 LEU 50 560 560 LEU LEU A . n A 1 51 ASN 51 561 561 ASN ASN A . n A 1 52 GLU 52 562 562 GLU GLU A . n A 1 53 GLY 53 563 563 GLY GLY A . n A 1 54 ASP 54 564 564 ASP ASP A . n A 1 55 GLN 55 565 565 GLN GLN A . n A 1 56 VAL 56 566 566 VAL VAL A . n A 1 57 VAL 57 567 567 VAL VAL A . n A 1 58 LEU 58 568 568 LEU LEU A . n A 1 59 ILE 59 569 569 ILE ILE A . n A 1 60 ASN 60 570 570 ASN ASN A . n A 1 61 GLY 61 571 571 GLY GLY A . n A 1 62 ARG 62 572 572 ARG ARG A . n A 1 63 ASP 63 573 573 ASP ASP A . n A 1 64 ILE 64 574 574 ILE ILE A . n A 1 65 ALA 65 575 575 ALA ALA A . n A 1 66 GLU 66 576 576 GLU GLU A . n A 1 67 HIS 67 577 577 HIS HIS A . n A 1 68 THR 68 578 578 THR THR A . n A 1 69 HIS 69 579 579 HIS HIS A . n A 1 70 ASP 70 580 580 ASP ASP A . n A 1 71 GLN 71 581 581 GLN GLN A . n A 1 72 VAL 72 582 582 VAL VAL A . n A 1 73 VAL 73 583 583 VAL VAL A . n A 1 74 LEU 74 584 584 LEU LEU A . n A 1 75 PHE 75 585 585 PHE PHE A . n A 1 76 ILE 76 586 586 ILE ILE A . n A 1 77 LYS 77 587 587 LYS LYS A . n A 1 78 ALA 78 588 588 ALA ALA A . n A 1 79 SER 79 589 589 SER SER A . n A 1 80 CYS 80 590 590 CYS CYS A . n A 1 81 GLU 81 591 591 GLU GLU A . n A 1 82 ARG 82 592 592 ARG ARG A . n A 1 83 HIS 83 593 593 HIS HIS A . n A 1 84 SER 84 594 594 SER SER A . n A 1 85 GLY 85 595 595 GLY GLY A . n A 1 86 GLU 86 596 596 GLU GLU A . n A 1 87 LEU 87 597 597 LEU LEU A . n A 1 88 MET 88 598 598 MET MET A . n A 1 89 LEU 89 599 599 LEU LEU A . n A 1 90 LEU 90 600 600 LEU LEU A . n A 1 91 VAL 91 601 601 VAL VAL A . n A 1 92 ARG 92 602 602 ARG ARG A . n A 1 93 PRO 93 603 603 PRO PRO A . n A 1 94 ASN 94 604 604 ASN ASN A . n A 1 95 ALA 95 605 605 ALA ALA A . n A 1 96 VAL 96 606 606 VAL VAL A . n A 1 97 GLU 97 607 607 GLU GLU A . n A 1 98 SER 98 608 608 SER SER A . n A 1 99 THR 99 609 609 THR THR A . n A 1 100 VAL 100 610 610 VAL VAL A . n B 1 1 SER 1 -1 ? ? ? B . n B 1 2 MET 2 0 0 MET MET B . n B 1 3 ASP 3 513 513 ASP ASP B . n B 1 4 ASN 4 514 514 ASN ASN B . n B 1 5 LEU 5 515 515 LEU LEU B . n B 1 6 VAL 6 516 516 VAL VAL B . n B 1 7 LEU 7 517 517 LEU LEU B . n B 1 8 ILE 8 518 518 ILE ILE B . n B 1 9 ARG 9 519 519 ARG ARG B . n B 1 10 MET 10 520 520 MET MET B . n B 1 11 LYS 11 521 521 LYS LYS B . n B 1 12 PRO 12 522 522 PRO PRO B . n B 1 13 ASP 13 523 523 ASP ASP B . n B 1 14 GLU 14 524 ? ? ? B . n B 1 15 ASN 15 525 525 ASN ASN B . n B 1 16 GLY 16 526 526 GLY GLY B . n B 1 17 ARG 17 527 527 ARG ARG B . n B 1 18 PHE 18 528 528 PHE PHE B . n B 1 19 GLY 19 529 529 GLY GLY B . n B 1 20 PHE 20 530 530 PHE PHE B . n B 1 21 ASN 21 531 531 ASN ASN B . n B 1 22 VAL 22 532 532 VAL VAL B . n B 1 23 LYS 23 533 533 LYS LYS B . n B 1 24 GLY 24 534 534 GLY GLY B . n B 1 25 GLY 25 535 535 GLY GLY B . n B 1 26 TYR 26 536 536 TYR TYR B . n B 1 27 ASP 27 537 537 ASP ASP B . n B 1 28 GLN 28 538 538 GLN GLN B . n B 1 29 LYS 29 539 539 LYS LYS B . n B 1 30 MET 30 540 540 MET MET B . n B 1 31 PRO 31 541 541 PRO PRO B . n B 1 32 VAL 32 542 542 VAL VAL B . n B 1 33 ILE 33 543 543 ILE ILE B . n B 1 34 VAL 34 544 544 VAL VAL B . n B 1 35 SER 35 545 545 SER SER B . n B 1 36 ARG 36 546 546 ARG ARG B . n B 1 37 VAL 37 547 547 VAL VAL B . n B 1 38 ALA 38 548 548 ALA ALA B . n B 1 39 PRO 39 549 549 PRO PRO B . n B 1 40 GLY 40 550 550 GLY GLY B . n B 1 41 THR 41 551 551 THR THR B . n B 1 42 PRO 42 552 552 PRO PRO B . n B 1 43 ALA 43 553 553 ALA ALA B . n B 1 44 ASP 44 554 554 ASP ASP B . n B 1 45 LEU 45 555 555 LEU LEU B . n B 1 46 CYS 46 556 556 CYS CYS B . n B 1 47 VAL 47 557 557 VAL VAL B . n B 1 48 PRO 48 558 558 PRO PRO B . n B 1 49 ARG 49 559 559 ARG ARG B . n B 1 50 LEU 50 560 560 LEU LEU B . n B 1 51 ASN 51 561 561 ASN ASN B . n B 1 52 GLU 52 562 562 GLU GLU B . n B 1 53 GLY 53 563 563 GLY GLY B . n B 1 54 ASP 54 564 564 ASP ASP B . n B 1 55 GLN 55 565 565 GLN GLN B . n B 1 56 VAL 56 566 566 VAL VAL B . n B 1 57 VAL 57 567 567 VAL VAL B . n B 1 58 LEU 58 568 568 LEU LEU B . n B 1 59 ILE 59 569 569 ILE ILE B . n B 1 60 ASN 60 570 570 ASN ASN B . n B 1 61 GLY 61 571 571 GLY GLY B . n B 1 62 ARG 62 572 572 ARG ARG B . n B 1 63 ASP 63 573 573 ASP ASP B . n B 1 64 ILE 64 574 574 ILE ILE B . n B 1 65 ALA 65 575 575 ALA ALA B . n B 1 66 GLU 66 576 576 GLU GLU B . n B 1 67 HIS 67 577 577 HIS HIS B . n B 1 68 THR 68 578 578 THR THR B . n B 1 69 HIS 69 579 579 HIS HIS B . n B 1 70 ASP 70 580 580 ASP ASP B . n B 1 71 GLN 71 581 581 GLN GLN B . n B 1 72 VAL 72 582 582 VAL VAL B . n B 1 73 VAL 73 583 583 VAL VAL B . n B 1 74 LEU 74 584 584 LEU LEU B . n B 1 75 PHE 75 585 585 PHE PHE B . n B 1 76 ILE 76 586 586 ILE ILE B . n B 1 77 LYS 77 587 587 LYS LYS B . n B 1 78 ALA 78 588 588 ALA ALA B . n B 1 79 SER 79 589 589 SER SER B . n B 1 80 CYS 80 590 ? ? ? B . n B 1 81 GLU 81 591 ? ? ? B . n B 1 82 ARG 82 592 ? ? ? B . n B 1 83 HIS 83 593 ? ? ? B . n B 1 84 SER 84 594 ? ? ? B . n B 1 85 GLY 85 595 ? ? ? B . n B 1 86 GLU 86 596 596 GLU GLU B . n B 1 87 LEU 87 597 597 LEU LEU B . n B 1 88 MET 88 598 598 MET MET B . n B 1 89 LEU 89 599 599 LEU LEU B . n B 1 90 LEU 90 600 600 LEU LEU B . n B 1 91 VAL 91 601 601 VAL VAL B . n B 1 92 ARG 92 602 602 ARG ARG B . n B 1 93 PRO 93 603 603 PRO PRO B . n B 1 94 ASN 94 604 604 ASN ASN B . n B 1 95 ALA 95 605 605 ALA ALA B . n B 1 96 VAL 96 606 606 VAL VAL B . n B 1 97 GLU 97 607 607 GLU GLU B . n B 1 98 SER 98 608 608 SER SER B . n B 1 99 THR 99 609 609 THR THR B . n B 1 100 VAL 100 610 610 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2001 2001 HOH HOH A . C 2 HOH 2 2002 2002 HOH HOH A . C 2 HOH 3 2003 2003 HOH HOH A . C 2 HOH 4 2004 2004 HOH HOH A . C 2 HOH 5 2005 2005 HOH HOH A . C 2 HOH 6 2006 2006 HOH HOH A . C 2 HOH 7 2007 2007 HOH HOH A . C 2 HOH 8 2008 2008 HOH HOH A . C 2 HOH 9 2009 2009 HOH HOH A . C 2 HOH 10 2010 2010 HOH HOH A . C 2 HOH 11 2011 2011 HOH HOH A . C 2 HOH 12 2012 2012 HOH HOH A . C 2 HOH 13 2013 2013 HOH HOH A . C 2 HOH 14 2014 2014 HOH HOH A . C 2 HOH 15 2015 2015 HOH HOH A . C 2 HOH 16 2016 2016 HOH HOH A . C 2 HOH 17 2017 2017 HOH HOH A . C 2 HOH 18 2018 2018 HOH HOH A . C 2 HOH 19 2019 2019 HOH HOH A . C 2 HOH 20 2020 2020 HOH HOH A . C 2 HOH 21 2021 2021 HOH HOH A . C 2 HOH 22 2022 2022 HOH HOH A . C 2 HOH 23 2023 2023 HOH HOH A . C 2 HOH 24 2024 2024 HOH HOH A . C 2 HOH 25 2025 2025 HOH HOH A . C 2 HOH 26 2026 2026 HOH HOH A . C 2 HOH 27 2027 2027 HOH HOH A . C 2 HOH 28 2028 2028 HOH HOH A . C 2 HOH 29 2029 2029 HOH HOH A . C 2 HOH 30 2030 2030 HOH HOH A . C 2 HOH 31 2031 2031 HOH HOH A . C 2 HOH 32 2032 2032 HOH HOH A . C 2 HOH 33 2033 2033 HOH HOH A . C 2 HOH 34 2034 2034 HOH HOH A . C 2 HOH 35 2035 2035 HOH HOH A . C 2 HOH 36 2036 2036 HOH HOH A . C 2 HOH 37 2037 2037 HOH HOH A . C 2 HOH 38 2038 2038 HOH HOH A . C 2 HOH 39 2039 2039 HOH HOH A . D 2 HOH 1 2001 2001 HOH HOH B . D 2 HOH 2 2002 2002 HOH HOH B . D 2 HOH 3 2003 2003 HOH HOH B . D 2 HOH 4 2004 2004 HOH HOH B . D 2 HOH 5 2005 2005 HOH HOH B . D 2 HOH 6 2006 2006 HOH HOH B . D 2 HOH 7 2007 2007 HOH HOH B . D 2 HOH 8 2008 2008 HOH HOH B . D 2 HOH 9 2009 2009 HOH HOH B . D 2 HOH 10 2010 2010 HOH HOH B . D 2 HOH 11 2011 2011 HOH HOH B . D 2 HOH 12 2012 2012 HOH HOH B . D 2 HOH 13 2013 2013 HOH HOH B . D 2 HOH 14 2014 2014 HOH HOH B . D 2 HOH 15 2015 2015 HOH HOH B . D 2 HOH 16 2016 2016 HOH HOH B . D 2 HOH 17 2017 2017 HOH HOH B . D 2 HOH 18 2018 2018 HOH HOH B . D 2 HOH 19 2019 2019 HOH HOH B . D 2 HOH 20 2020 2020 HOH HOH B . D 2 HOH 21 2021 2021 HOH HOH B . D 2 HOH 22 2022 2022 HOH HOH B . D 2 HOH 23 2023 2023 HOH HOH B . D 2 HOH 24 2024 2024 HOH HOH B . D 2 HOH 25 2025 2025 HOH HOH B . D 2 HOH 26 2026 2026 HOH HOH B . D 2 HOH 27 2027 2027 HOH HOH B . D 2 HOH 28 2028 2028 HOH HOH B . D 2 HOH 29 2029 2029 HOH HOH B . D 2 HOH 30 2030 2030 HOH HOH B . D 2 HOH 31 2031 2031 HOH HOH B . D 2 HOH 32 2032 2032 HOH HOH B . D 2 HOH 33 2033 2033 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS dimeric 2 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1 A,C 3 1 B,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1920 ? 1 MORE -4.5 ? 1 'SSA (A^2)' 12340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-03-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation_author 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_initial_refinement_model 7 4 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation_author.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_database_status.status_code_sf' 5 4 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 6 4 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 7 4 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 8 4 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 9 4 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 10 4 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 11 4 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 12 4 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 16.7358 19.5704 17.6481 -0.0746 -0.1158 -0.0733 0.0159 -0.0276 -0.0103 2.0290 2.7036 4.4266 -0.6362 0.5409 -1.2290 0.0713 -0.0628 -0.0143 0.0590 0.1484 0.1132 0.0690 -0.1328 -0.2197 'X-RAY DIFFRACTION' 2 ? refined 7.8947 33.9617 -2.0656 -0.0635 -0.0629 -0.0511 -0.0025 -0.0297 0.0172 1.5754 2.7018 6.7214 1.0127 0.4598 1.1253 -0.0625 0.0607 0.0648 -0.0199 -0.0154 0.1460 0.0812 -0.5197 0.0778 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 513 ? ? A 610 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 513 ? ? B 610 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0066 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 514 ? ? -141.89 52.03 2 1 ASP A 523 ? ? -69.13 -174.88 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 524 ? CG ? A GLU 14 CG 2 1 Y 1 A GLU 524 ? CD ? A GLU 14 CD 3 1 Y 1 A GLU 524 ? OE1 ? A GLU 14 OE1 4 1 Y 1 A GLU 524 ? OE2 ? A GLU 14 OE2 5 1 Y 1 A LYS 539 ? CG ? A LYS 29 CG 6 1 Y 1 A LYS 539 ? CD ? A LYS 29 CD 7 1 Y 1 A LYS 539 ? CE ? A LYS 29 CE 8 1 Y 1 A LYS 539 ? NZ ? A LYS 29 NZ 9 1 Y 1 A SER 589 ? OG ? A SER 79 OG 10 1 Y 1 A CYS 590 ? SG ? A CYS 80 SG 11 1 Y 1 A HIS 593 ? CG ? A HIS 83 CG 12 1 Y 1 A HIS 593 ? ND1 ? A HIS 83 ND1 13 1 Y 1 A HIS 593 ? CD2 ? A HIS 83 CD2 14 1 Y 1 A HIS 593 ? CE1 ? A HIS 83 CE1 15 1 Y 1 A HIS 593 ? NE2 ? A HIS 83 NE2 16 1 Y 1 A SER 594 ? OG ? A SER 84 OG 17 1 Y 1 B ARG 519 ? CG ? B ARG 9 CG 18 1 Y 1 B ARG 519 ? CD ? B ARG 9 CD 19 1 Y 1 B ARG 519 ? NE ? B ARG 9 NE 20 1 Y 1 B ARG 519 ? CZ ? B ARG 9 CZ 21 1 Y 1 B ARG 519 ? NH1 ? B ARG 9 NH1 22 1 Y 1 B ARG 519 ? NH2 ? B ARG 9 NH2 23 1 Y 1 B LYS 521 ? CG ? B LYS 11 CG 24 1 Y 1 B LYS 521 ? CD ? B LYS 11 CD 25 1 Y 1 B LYS 521 ? CE ? B LYS 11 CE 26 1 Y 1 B LYS 521 ? NZ ? B LYS 11 NZ 27 1 Y 1 B ARG 527 ? NE ? B ARG 17 NE 28 1 Y 1 B ARG 527 ? CZ ? B ARG 17 CZ 29 1 Y 1 B ARG 527 ? NH1 ? B ARG 17 NH1 30 1 Y 1 B ARG 527 ? NH2 ? B ARG 17 NH2 31 1 Y 1 B LYS 539 ? CG ? B LYS 29 CG 32 1 Y 1 B LYS 539 ? CD ? B LYS 29 CD 33 1 Y 1 B LYS 539 ? CE ? B LYS 29 CE 34 1 Y 1 B LYS 539 ? NZ ? B LYS 29 NZ 35 1 Y 1 B VAL 557 ? CG1 ? B VAL 47 CG1 36 1 Y 1 B VAL 557 ? CG2 ? B VAL 47 CG2 37 1 Y 1 B GLU 596 ? CG ? B GLU 86 CG 38 1 Y 1 B GLU 596 ? CD ? B GLU 86 CD 39 1 Y 1 B GLU 596 ? OE1 ? B GLU 86 OE1 40 1 Y 1 B GLU 596 ? OE2 ? B GLU 86 OE2 41 1 Y 1 B MET 598 ? CG ? B MET 88 CG 42 1 Y 1 B MET 598 ? SD ? B MET 88 SD 43 1 Y 1 B MET 598 ? CE ? B MET 88 CE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -1 ? A SER 1 2 1 Y 1 A MET 0 ? A MET 2 3 1 Y 1 B SER -1 ? B SER 1 4 1 Y 1 B GLU 524 ? B GLU 14 5 1 Y 1 B CYS 590 ? B CYS 80 6 1 Y 1 B GLU 591 ? B GLU 81 7 1 Y 1 B ARG 592 ? B ARG 82 8 1 Y 1 B HIS 593 ? B HIS 83 9 1 Y 1 B SER 594 ? B SER 84 10 1 Y 1 B GLY 595 ? B GLY 85 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TYR N N N N 321 TYR CA C N S 322 TYR C C N N 323 TYR O O N N 324 TYR CB C N N 325 TYR CG C Y N 326 TYR CD1 C Y N 327 TYR CD2 C Y N 328 TYR CE1 C Y N 329 TYR CE2 C Y N 330 TYR CZ C Y N 331 TYR OH O N N 332 TYR OXT O N N 333 TYR H H N N 334 TYR H2 H N N 335 TYR HA H N N 336 TYR HB2 H N N 337 TYR HB3 H N N 338 TYR HD1 H N N 339 TYR HD2 H N N 340 TYR HE1 H N N 341 TYR HE2 H N N 342 TYR HH H N N 343 TYR HXT H N N 344 VAL N N N N 345 VAL CA C N S 346 VAL C C N N 347 VAL O O N N 348 VAL CB C N N 349 VAL CG1 C N N 350 VAL CG2 C N N 351 VAL OXT O N N 352 VAL H H N N 353 VAL H2 H N N 354 VAL HA H N N 355 VAL HB H N N 356 VAL HG11 H N N 357 VAL HG12 H N N 358 VAL HG13 H N N 359 VAL HG21 H N N 360 VAL HG22 H N N 361 VAL HG23 H N N 362 VAL HXT H N N 363 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TYR N CA sing N N 306 TYR N H sing N N 307 TYR N H2 sing N N 308 TYR CA C sing N N 309 TYR CA CB sing N N 310 TYR CA HA sing N N 311 TYR C O doub N N 312 TYR C OXT sing N N 313 TYR CB CG sing N N 314 TYR CB HB2 sing N N 315 TYR CB HB3 sing N N 316 TYR CG CD1 doub Y N 317 TYR CG CD2 sing Y N 318 TYR CD1 CE1 sing Y N 319 TYR CD1 HD1 sing N N 320 TYR CD2 CE2 doub Y N 321 TYR CD2 HD2 sing N N 322 TYR CE1 CZ doub Y N 323 TYR CE1 HE1 sing N N 324 TYR CE2 CZ sing Y N 325 TYR CE2 HE2 sing N N 326 TYR CZ OH sing N N 327 TYR OH HH sing N N 328 TYR OXT HXT sing N N 329 VAL N CA sing N N 330 VAL N H sing N N 331 VAL N H2 sing N N 332 VAL CA C sing N N 333 VAL CA CB sing N N 334 VAL CA HA sing N N 335 VAL C O doub N N 336 VAL C OXT sing N N 337 VAL CB CG1 sing N N 338 VAL CB CG2 sing N N 339 VAL CB HB sing N N 340 VAL CG1 HG11 sing N N 341 VAL CG1 HG12 sing N N 342 VAL CG1 HG13 sing N N 343 VAL CG2 HG21 sing N N 344 VAL CG2 HG22 sing N N 345 VAL CG2 HG23 sing N N 346 VAL OXT HXT sing N N 347 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 2OCS 'PDB ENTRIES 2OCS, 2HE2, 1QAV' 2 ? 'experimental model' PDB 2HE2 'PDB ENTRIES 2OCS, 2HE2, 1QAV' 3 ? 'experimental model' PDB 1QAV 'PDB ENTRIES 2OCS, 2HE2, 1QAV' #