HEADER MEMBRANE PROTEIN 15-MAR-08 2VQH TITLE CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM GLUTAMICUM ( TITLE 2 CRYSTAL FORM II) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN CGL0972; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 28-126; COMPND 5 SYNONYM: PORB, ANION-SPECIFIC PORIN, ANION-SPECIFIC PORIN COMPND 6 PRECURSOR; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM; SOURCE 3 ORGANISM_TAXID: 1718; SOURCE 4 ATCC: 13032; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSMEMBRANE, MEMBRANE PROTEIN, PORIN, MEMBRANE, KEYWDS 2 TRANSPORT, ION TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR K.ZIEGLER,R.BENZ,G.E.SCHULZ REVDAT 3 24-FEB-09 2VQH 1 VERSN REVDAT 2 27-MAY-08 2VQH 1 JRNL REVDAT 1 20-MAY-08 2VQH 0 JRNL AUTH K.ZIEGLER,R.BENZ,G.E.SCHULZ JRNL TITL A PUTATIVE ALPHA-HELICAL PORIN FROM JRNL TITL 2 CORYNEBACTERIUM GLUTAMICUM. JRNL REF J.MOL.BIOL. V. 379 482 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18462756 JRNL DOI 10.1016/J.JMB.2008.04.017 REMARK 2 REMARK 2 RESOLUTION. 2.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 7163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.247 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.500 REMARK 3 FREE R VALUE TEST SET COUNT : 498 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.89 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 519 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 36 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1114 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.17000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : 0.25000 REMARK 3 B12 (A**2) : -0.08000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.482 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.302 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.234 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.338 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.909 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1149 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1563 ; 0.945 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 146 ; 3.856 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 57 ;38.314 ;26.140 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 171 ;17.066 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;10.138 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 166 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 892 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 511 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 802 ; 0.297 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 26 ; 0.146 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 42 ; 0.192 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.135 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 743 ; 0.457 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1127 ; 0.792 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 484 ; 0.991 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 436 ; 1.641 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): -31.1380 26.8390 5.1130 REMARK 3 T TENSOR REMARK 3 T11: -0.5802 T22: -0.3726 REMARK 3 T33: -0.5890 T12: 0.0211 REMARK 3 T13: -0.0309 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 7.7507 L22: 6.0455 REMARK 3 L33: 8.9996 L12: 4.6252 REMARK 3 L13: -1.1050 L23: -0.4627 REMARK 3 S TENSOR REMARK 3 S11: 0.0061 S12: -0.4260 S13: -0.0389 REMARK 3 S21: -0.0180 S22: -0.0407 S23: 0.2443 REMARK 3 S31: 0.2367 S32: -0.0074 S33: 0.0347 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 17 B 88 REMARK 3 ORIGIN FOR THE GROUP (A): -49.1160 26.3760 -4.1500 REMARK 3 T TENSOR REMARK 3 T11: -0.6059 T22: -0.4333 REMARK 3 T33: -0.4983 T12: -0.0310 REMARK 3 T13: -0.0233 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 9.3763 L22: 11.9394 REMARK 3 L33: 6.2487 L12: -7.3907 REMARK 3 L13: 0.2316 L23: 0.4501 REMARK 3 S TENSOR REMARK 3 S11: 0.0921 S12: 0.0743 S13: 0.2017 REMARK 3 S21: -0.0439 S22: 0.0016 S23: -0.1937 REMARK 3 S31: 0.1947 S32: -0.0552 S33: -0.0937 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL REMARK 3 B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. REMARK 4 REMARK 4 2VQH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAR-08. REMARK 100 THE PDBE ID CODE IS EBI-35708. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7663 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.89 REMARK 200 RESOLUTION RANGE LOW (A) : 70.53 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 20.3 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08 REMARK 200 FOR THE DATA SET : 28.80 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.4 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48 REMARK 200 FOR SHELL : 8.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.89733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 54.44867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 81.67300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 27.22433 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 136.12167 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 108.89733 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 54.44867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 27.22433 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 81.67300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 136.12167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ASP A 2 REMARK 465 PHE A 3 REMARK 465 ALA A 4 REMARK 465 ASN A 5 REMARK 465 LEU A 6 REMARK 465 SER A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 ASN A 10 REMARK 465 LYS A 11 REMARK 465 GLU A 12 REMARK 465 TYR A 89 REMARK 465 LEU A 90 REMARK 465 SER A 91 REMARK 465 GLU A 92 REMARK 465 LEU A 93 REMARK 465 SER A 94 REMARK 465 SER A 95 REMARK 465 ASN A 96 REMARK 465 PHE A 97 REMARK 465 SER A 98 REMARK 465 SER A 99 REMARK 465 SER B 1 REMARK 465 ASP B 2 REMARK 465 PHE B 3 REMARK 465 ALA B 4 REMARK 465 ASN B 5 REMARK 465 LEU B 6 REMARK 465 SER B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 ASN B 10 REMARK 465 LYS B 11 REMARK 465 GLU B 12 REMARK 465 LEU B 13 REMARK 465 SER B 14 REMARK 465 PRO B 15 REMARK 465 GLN B 16 REMARK 465 TYR B 89 REMARK 465 LEU B 90 REMARK 465 SER B 91 REMARK 465 GLU B 92 REMARK 465 LEU B 93 REMARK 465 SER B 94 REMARK 465 SER B 95 REMARK 465 ASN B 96 REMARK 465 PHE B 97 REMARK 465 SER B 98 REMARK 465 SER B 99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 15 -18.91 -27.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CAC A1094 AS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CAC A1094 O1 REMARK 620 2 CAC A1094 O2 107.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CAC A1095 AS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CAC A1095 O1 REMARK 620 2 CAC A1095 O2 109.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CAC B1092 AS REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CAC B1092 O1 REMARK 620 2 CAC B1092 O2 109.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1089 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 68 OE2 REMARK 620 2 GLU A 68 OE2 86.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1090 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 65 OD1 REMARK 620 2 ASP A 69 OD2 85.3 REMARK 620 3 GLU B 46 OE2 102.3 103.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1092 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 26 OE2 REMARK 620 2 GLU B 26 OE2 87.5 REMARK 620 3 CAC A1094 O2 101.6 112.1 REMARK 620 4 CAC A1095 O2 108.0 93.2 141.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1093 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 37 OE2 REMARK 620 2 GLU B 37 OE1 78.0 REMARK 620 3 CAC A1094 O1 112.9 144.0 REMARK 620 4 CAC A1095 O1 102.9 86.7 121.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1089 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 65 OD1 REMARK 620 2 ASP B 69 OD2 78.1 REMARK 620 3 GLU A 46 OE2 103.7 142.5 REMARK 620 4 ASP B 69 OD1 115.3 56.2 91.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1090 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 76 OD1 REMARK 620 2 ASP B 76 OD2 54.2 REMARK 620 3 CAC B1092 O1 107.9 135.9 REMARK 620 N 1 2 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1089 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1090 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1091 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1092 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A1093 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC A1094 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC A1095 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B1089 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B1090 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B1091 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC B1092 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VQG RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM REMARK 900 GLUTAMICUM (CRYSTAL FORM I) REMARK 900 RELATED ID: 2VQK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM REMARK 900 GLUTAMICUM (CRYSTAL FORM IV) REMARK 900 RELATED ID: 2VQL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF PORB FROM CORYNEBACTERIUM REMARK 900 GLUTAMICUM (CRYSTAL FORM III) DBREF 2VQH A 1 99 UNP Q8NRS3 Q8NRS3_CORGL 28 126 DBREF 2VQH B 1 99 UNP Q8NRS3 Q8NRS3_CORGL 28 126 SEQRES 1 A 99 SER ASP PHE ALA ASN LEU SER SER THR ASN LYS GLU LEU SEQRES 2 A 99 SER PRO GLN TYR ASN TRP VAL ALA CYS GLY ILE LEU GLU SEQRES 3 A 99 GLY GLY LEU LYS ALA ALA GLY VAL LEU GLU GLU GLY GLN SEQRES 4 A 99 TYR ASN ARG GLU LEU ALA GLU ALA ILE ALA ALA LYS GLY SEQRES 5 A 99 GLU GLY PHE TRP THR THR GLN PHE PRO GLN ILE GLY ASP SEQRES 6 A 99 TRP ASN GLU ASP GLN ALA ALA ALA LEU ALA ASP ARG ALA SEQRES 7 A 99 GLN THR CYS GLY LEU VAL LYS ALA ASP THR TYR LEU SER SEQRES 8 A 99 GLU LEU SER SER ASN PHE SER SER SEQRES 1 B 99 SER ASP PHE ALA ASN LEU SER SER THR ASN LYS GLU LEU SEQRES 2 B 99 SER PRO GLN TYR ASN TRP VAL ALA CYS GLY ILE LEU GLU SEQRES 3 B 99 GLY GLY LEU LYS ALA ALA GLY VAL LEU GLU GLU GLY GLN SEQRES 4 B 99 TYR ASN ARG GLU LEU ALA GLU ALA ILE ALA ALA LYS GLY SEQRES 5 B 99 GLU GLY PHE TRP THR THR GLN PHE PRO GLN ILE GLY ASP SEQRES 6 B 99 TRP ASN GLU ASP GLN ALA ALA ALA LEU ALA ASP ARG ALA SEQRES 7 B 99 GLN THR CYS GLY LEU VAL LYS ALA ASP THR TYR LEU SER SEQRES 8 B 99 GLU LEU SER SER ASN PHE SER SER HET ZN A1089 1 HET ZN A1090 1 HET ZN A1091 1 HET ZN A1092 1 HET ZN A1093 1 HET CAC A1094 5 HET CAC A1095 5 HET ZN B1089 1 HET ZN B1090 1 HET ZN B1091 1 HET CAC B1092 5 HETNAM CAC CACODYLATE ION HETNAM ZN ZINC ION FORMUL 3 CAC 3(C2 H6 AS O2 1-) FORMUL 4 ZN 8(ZN 2+) HELIX 1 1 TRP A 19 ALA A 32 1 14 HELIX 2 2 ASN A 41 GLY A 52 1 12 HELIX 3 3 PHE A 55 GLN A 59 1 5 HELIX 4 4 PRO A 61 CYS A 81 1 21 HELIX 5 5 TRP B 19 ALA B 32 1 14 HELIX 6 6 ASN B 41 GLY B 52 1 12 HELIX 7 7 PHE B 55 GLN B 59 1 5 HELIX 8 8 PRO B 61 CYS B 81 1 21 SSBOND 1 CYS A 22 CYS A 81 1555 1555 2.06 SSBOND 2 CYS B 22 CYS B 81 1555 1555 2.06 LINK ZN ZN A1089 OE2 GLU B 68 1555 1555 2.14 LINK ZN ZN A1089 OE2 GLU A 68 1555 1555 2.18 LINK ZN ZN A1090 OD1 ASP A 65 1555 1555 2.31 LINK ZN ZN A1090 OD2 ASP A 69 1555 1555 1.85 LINK ZN ZN A1090 OE2 GLU B 46 1555 1555 1.96 LINK ZN ZN A1091 OD2 ASP A 76 1555 1555 1.85 LINK ZN ZN A1092 O2 CAC A1095 1555 1555 1.75 LINK ZN ZN A1092 OE2 GLU A 26 1555 1555 1.85 LINK ZN ZN A1092 OE2 GLU B 26 1555 8665 2.16 LINK ZN ZN A1092 O2 CAC A1094 1555 1555 1.87 LINK ZN ZN A1093 OE1 GLU B 37 1555 8665 2.47 LINK ZN ZN A1093 OE2 GLU A 37 1555 1555 1.98 LINK ZN ZN A1093 O1 CAC A1094 1555 1555 1.73 LINK ZN ZN A1093 O1 CAC A1095 1555 1555 1.71 LINK ZN ZN B1089 OD2 ASP B 69 1555 1555 2.17 LINK ZN ZN B1089 OE2 GLU A 46 1555 1555 1.84 LINK ZN ZN B1089 OD1 ASP B 69 1555 1555 2.45 LINK ZN ZN B1089 OD1 ASP B 65 1555 1555 2.47 LINK ZN ZN B1090 OD2 ASP B 76 1555 1555 2.50 LINK ZN ZN B1090 O1 CAC B1092 1555 1555 2.28 LINK ZN ZN B1090 OD1 ASP B 76 1555 1555 2.33 SITE 1 AC1 2 GLU A 68 GLU B 68 SITE 1 AC2 3 ASP A 65 ASP A 69 GLU B 46 SITE 1 AC3 3 ASP A 76 ASP B 87 CAC B1092 SITE 1 AC4 6 GLU A 26 LYS A 30 CAC A1094 CAC A1095 SITE 2 AC4 6 GLU B 26 LYS B 30 SITE 1 AC5 4 GLU A 37 CAC A1094 CAC A1095 GLU B 37 SITE 1 AC6 9 GLU A 26 LYS A 30 GLU A 37 ZN A1092 SITE 2 AC6 9 ZN A1093 CAC A1095 GLU B 26 GLU B 37 SITE 3 AC6 9 GLY B 82 SITE 1 AC7 10 GLU A 26 GLU A 37 GLY A 82 LEU A 83 SITE 2 AC7 10 ZN A1092 ZN A1093 CAC A1094 GLU B 26 SITE 3 AC7 10 LYS B 30 GLU B 37 SITE 1 AC8 3 GLU A 46 ASP B 65 ASP B 69 SITE 1 AC9 3 ASP A 87 ASP B 76 CAC B1092 SITE 1 BC1 1 GLU B 53 SITE 1 BC2 8 ASN A 41 ASP A 76 ASP A 87 ZN A1091 SITE 2 BC2 8 ASN B 41 ASP B 76 GLN B 79 ZN B1090 CRYST1 81.457 81.457 163.346 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012276 0.007088 0.000000 0.00000 SCALE2 0.000000 0.014176 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006122 0.00000