data_2VS3 # _entry.id 2VS3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VS3 pdb_00002vs3 10.2210/pdb2vs3/pdb PDBE EBI-35943 ? ? WWPDB D_1290035943 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1VZT unspecified 'ROLES ON INDIVIDUAL RESIDUES OF ALPHA-1,3 GALACTOSYLTRANSFERASES IN SUBSTRATE BINDING AND CATALYSIS' PDB 2JCF unspecified 'CRYSTAL STRUCTURE OF ALPHA-1,3 GALACTOSYLTRANSFERASE (R365K) IN COMPLEX WITH UDP-2F-GALACTOSE' PDB 1GX0 unspecified ;STRUCTURAL BASIS OF ORDERED BINDING OF DONOR AND ACCEPTOR SUBSTRATES TO THE RETAINING GLYCOSYLTRANSFERASE: ALPHA -1,3 GALACTOSYLTRANSFERASE ; PDB 1VZX unspecified 'ROLES OF ACTIVE SITE TRYPTOPHANS IN SUBSTRATE BINDING AND CATALYSIS BY ALPHA-1, 3 GALACTOSYLTRANSFERASE' PDB 1O7Q unspecified 'ROLES OF INDIVIDUAL RESIDUES OF ALPHA-1,3 GALACTOSYLTRANSFERASES IN SUBSTRATE BINDING AND CATALYSIS' PDB 1GX4 unspecified ;STRUCTURAL BASIS OF ORDERED BINDING OF DONOR AND ACCEPTOR SUBSTRATES TO THE RETAINING GLYCOSYLTRANSFERASE: ALPHA -1,3 GALACTOSYLTRANSFERASE ; PDB 2JCJ unspecified 'CRYSTAL STRUCTURE OF ALPHA-1,3 GALACTOSYLTRANSFERASE (C-TERMINUS TRUNCATED MUTANT-C3) IN COMPLEX WITH UDP AND TRIS' PDB 2JCK unspecified 'CRYSTAL STRUCTURE OF ALPHA-1,3 GALACTOSYLTRANSFERASE (R365K) IN COMPLEX WITH UDP AND 2 MANGANESE ION' PDB 2VFZ unspecified 'CRYSTAL STRUCTURE OF ALPHA-1,3 GALACTOSYLTRANSFERASE (R365K) IN COMPLEX WITH UDP-2F-GALACTOSE' PDB 1G93 unspecified 'CRYSTAL STRUCTURE OF THE BOVINE CATALYTIC DOMAIN OF ALPHA-1,3-GALACTOSYLTRANSFERASE IN THE PRESENCE OF UDP-GALACTOSE' PDB 1G8O unspecified 'CRYSTALLOGRAPHIC STRUCTURE OF THE NATIVE BOVINE ALPHA-1,3-GALACTOSYLTRANSFERASE CATALYTIC DOMAIN' PDB 1GWV unspecified ;STRUCTURAL BASIS OF ORDERED BINDING OF DONOR AND ACCEPTOR SUBSTRATES TO THE RETAINING GLYCOSYLTRANSFERASE: ALPHA -1,3 GALACTOSYLTRANSFERASE ; PDB 1K4V unspecified '1.53 A CRYSTAL STRUCTURE OF THE BETA- GALACTOSIDE-ALPHA-1,3-GALACTOSYLTRANSFERASE IN COMPLEX WITH UDP' PDB 1VZU unspecified 'ROLES OF ACTIVE SITE TRYPTOPHANS IN SUBSTRATE BINDING AND CATALYSIS BY ALPHA-1, 3 GALACTOSYLTRANSFERASE' PDB 1O7O unspecified 'ROLES OF INDIVIDUAL RESIDUES OF ALPHA-1,3 GALACTOSYLTRANSFERASES IN SUBSTRATE BINDING AND CATALYSIS' PDB 2JCL unspecified 'CRYSTAL STRUCTURE OF ALPHA-1,3 GALACTOSYLTRANSFERASE (R365K) IN THE ABSENCE OF LIGANDS' PDB 2JCO unspecified 'CRYSTAL STRUCTURE OF WILD TYPE ALPHA-1,3 GALACTOSYLTRANSFERASE IN THE ABSENCE OF LIGANDS' PDB 1GWW unspecified ;STRUCTURAL BASIS OF ORDERED BINDING OF DONOR AND ACCEPTOR SUBSTRATES TO THE RETAINING GLYCOSYLTRANSFERASE: ALPHA -1,3 GALACTOSYLTRANSFERASE ; PDB 1FG5 unspecified 'CRYSTAL STRUCTURE OF BOVINE ALPHA-1,3- GALACTOSYLTRANSFERASECATALYTIC DOMAIN.' PDB 2VS4 unspecified 'THE BINDING OF UDP-GALACTOSE BY AN ACTIVE SITE MUTANT OF ALPHA-1,3 GALACTOSYLTRANSFERASE (ALPHA3GT)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VS3 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-04-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tumbale, P.' 1 'Jamaluddin, H.' 2 'Thiyagarajan, N.' 3 'Brew, K.' 4 'Acharya, K.R.' 5 # _citation.id primary _citation.title ;Structural Basis of Udp-Galactose Binding by Alpha- 1,3-Galactosyltransferase (Alpha3Gt): Role of Negative Charge on Aspartic Acid 316 in Structure and Activity. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 47 _citation.page_first 8711 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18651752 _citation.pdbx_database_id_DOI 10.1021/BI800852A # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tumbale, P.' 1 ? primary 'Jamaluddin, H.' 2 ? primary 'Thiyagarajan, N.' 3 ? primary 'Brew, K.' 4 ? primary 'Acharya, K.R.' 5 ? # _cell.entry_id 2VS3 _cell.length_a 45.116 _cell.length_b 94.380 _cell.length_c 94.940 _cell.angle_alpha 90.00 _cell.angle_beta 99.30 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VS3 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE' 34089.180 2 2.4.1.87 YES 'RESIDUES 80-368' ? 2 branched man 'beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose' 383.349 2 ? ? ? ? 3 non-polymer syn "URIDINE-5'-DIPHOSPHATE" 404.161 2 ? ? ? ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 5 water nat water 18.015 424 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;GALACTOSYLTRANSFERASE, UDP-GALACTOSE\: BETA-D-GALACTOSYL-1,4-N-ACETYL-D-GLUCOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE, ALPHA-1,3 GALACTOSYLTRANSFERASE ; 2 N-acetyl-alpha-lactosamine # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ESKLKLSDWFNPFKRPEVVTMTKWKAPVVWEGTYNRAVLDNYYAKQKITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGH PVIFYIMVDDVSRMPLIELGPLRSFKVFKIKPEKRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVETL GESVAQLQAWWYKADPNDFTYERRKESAAYIPFGEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHNESH LNKYFLLNKPTKILSPEYCWDYHIGLPADIKLVKMSWQTKEYNVVRNNV ; _entity_poly.pdbx_seq_one_letter_code_can ;ESKLKLSDWFNPFKRPEVVTMTKWKAPVVWEGTYNRAVLDNYYAKQKITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGH PVIFYIMVDDVSRMPLIELGPLRSFKVFKIKPEKRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVETL GESVAQLQAWWYKADPNDFTYERRKESAAYIPFGEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHNESH LNKYFLLNKPTKILSPEYCWDYHIGLPADIKLVKMSWQTKEYNVVRNNV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 SER n 1 3 LYS n 1 4 LEU n 1 5 LYS n 1 6 LEU n 1 7 SER n 1 8 ASP n 1 9 TRP n 1 10 PHE n 1 11 ASN n 1 12 PRO n 1 13 PHE n 1 14 LYS n 1 15 ARG n 1 16 PRO n 1 17 GLU n 1 18 VAL n 1 19 VAL n 1 20 THR n 1 21 MET n 1 22 THR n 1 23 LYS n 1 24 TRP n 1 25 LYS n 1 26 ALA n 1 27 PRO n 1 28 VAL n 1 29 VAL n 1 30 TRP n 1 31 GLU n 1 32 GLY n 1 33 THR n 1 34 TYR n 1 35 ASN n 1 36 ARG n 1 37 ALA n 1 38 VAL n 1 39 LEU n 1 40 ASP n 1 41 ASN n 1 42 TYR n 1 43 TYR n 1 44 ALA n 1 45 LYS n 1 46 GLN n 1 47 LYS n 1 48 ILE n 1 49 THR n 1 50 VAL n 1 51 GLY n 1 52 LEU n 1 53 THR n 1 54 VAL n 1 55 PHE n 1 56 ALA n 1 57 VAL n 1 58 GLY n 1 59 ARG n 1 60 TYR n 1 61 ILE n 1 62 GLU n 1 63 HIS n 1 64 TYR n 1 65 LEU n 1 66 GLU n 1 67 GLU n 1 68 PHE n 1 69 LEU n 1 70 THR n 1 71 SER n 1 72 ALA n 1 73 ASN n 1 74 LYS n 1 75 HIS n 1 76 PHE n 1 77 MET n 1 78 VAL n 1 79 GLY n 1 80 HIS n 1 81 PRO n 1 82 VAL n 1 83 ILE n 1 84 PHE n 1 85 TYR n 1 86 ILE n 1 87 MET n 1 88 VAL n 1 89 ASP n 1 90 ASP n 1 91 VAL n 1 92 SER n 1 93 ARG n 1 94 MET n 1 95 PRO n 1 96 LEU n 1 97 ILE n 1 98 GLU n 1 99 LEU n 1 100 GLY n 1 101 PRO n 1 102 LEU n 1 103 ARG n 1 104 SER n 1 105 PHE n 1 106 LYS n 1 107 VAL n 1 108 PHE n 1 109 LYS n 1 110 ILE n 1 111 LYS n 1 112 PRO n 1 113 GLU n 1 114 LYS n 1 115 ARG n 1 116 TRP n 1 117 GLN n 1 118 ASP n 1 119 ILE n 1 120 SER n 1 121 MET n 1 122 MET n 1 123 ARG n 1 124 MET n 1 125 LYS n 1 126 THR n 1 127 ILE n 1 128 GLY n 1 129 GLU n 1 130 HIS n 1 131 ILE n 1 132 VAL n 1 133 ALA n 1 134 HIS n 1 135 ILE n 1 136 GLN n 1 137 HIS n 1 138 GLU n 1 139 VAL n 1 140 ASP n 1 141 PHE n 1 142 LEU n 1 143 PHE n 1 144 CYS n 1 145 MET n 1 146 ASP n 1 147 VAL n 1 148 ASP n 1 149 GLN n 1 150 VAL n 1 151 PHE n 1 152 GLN n 1 153 ASP n 1 154 LYS n 1 155 PHE n 1 156 GLY n 1 157 VAL n 1 158 GLU n 1 159 THR n 1 160 LEU n 1 161 GLY n 1 162 GLU n 1 163 SER n 1 164 VAL n 1 165 ALA n 1 166 GLN n 1 167 LEU n 1 168 GLN n 1 169 ALA n 1 170 TRP n 1 171 TRP n 1 172 TYR n 1 173 LYS n 1 174 ALA n 1 175 ASP n 1 176 PRO n 1 177 ASN n 1 178 ASP n 1 179 PHE n 1 180 THR n 1 181 TYR n 1 182 GLU n 1 183 ARG n 1 184 ARG n 1 185 LYS n 1 186 GLU n 1 187 SER n 1 188 ALA n 1 189 ALA n 1 190 TYR n 1 191 ILE n 1 192 PRO n 1 193 PHE n 1 194 GLY n 1 195 GLU n 1 196 GLY n 1 197 ASP n 1 198 PHE n 1 199 TYR n 1 200 TYR n 1 201 HIS n 1 202 ALA n 1 203 ALA n 1 204 ILE n 1 205 PHE n 1 206 GLY n 1 207 GLY n 1 208 THR n 1 209 PRO n 1 210 THR n 1 211 GLN n 1 212 VAL n 1 213 LEU n 1 214 ASN n 1 215 ILE n 1 216 THR n 1 217 GLN n 1 218 GLU n 1 219 CYS n 1 220 PHE n 1 221 LYS n 1 222 GLY n 1 223 ILE n 1 224 LEU n 1 225 LYS n 1 226 ASP n 1 227 LYS n 1 228 LYS n 1 229 ASN n 1 230 ASP n 1 231 ILE n 1 232 GLU n 1 233 ALA n 1 234 GLN n 1 235 TRP n 1 236 HIS n 1 237 ASN n 1 238 GLU n 1 239 SER n 1 240 HIS n 1 241 LEU n 1 242 ASN n 1 243 LYS n 1 244 TYR n 1 245 PHE n 1 246 LEU n 1 247 LEU n 1 248 ASN n 1 249 LYS n 1 250 PRO n 1 251 THR n 1 252 LYS n 1 253 ILE n 1 254 LEU n 1 255 SER n 1 256 PRO n 1 257 GLU n 1 258 TYR n 1 259 CYS n 1 260 TRP n 1 261 ASP n 1 262 TYR n 1 263 HIS n 1 264 ILE n 1 265 GLY n 1 266 LEU n 1 267 PRO n 1 268 ALA n 1 269 ASP n 1 270 ILE n 1 271 LYS n 1 272 LEU n 1 273 VAL n 1 274 LYS n 1 275 MET n 1 276 SER n 1 277 TRP n 1 278 GLN n 1 279 THR n 1 280 LYS n 1 281 GLU n 1 282 TYR n 1 283 ASN n 1 284 VAL n 1 285 VAL n 1 286 ARG n 1 287 ASN n 1 288 ASN n 1 289 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name BOVINE _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'BOS TAURUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PET15B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET15B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GGTA1_BOVIN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P14769 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VS3 A 1 ? 289 ? P14769 80 ? 368 ? 80 368 2 1 2VS3 B 1 ? 289 ? P14769 80 ? 368 ? 80 368 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2VS3 ASN A 237 ? UNP P14769 ASP 316 'engineered mutation' 316 1 2 2VS3 ASN B 237 ? UNP P14769 ASP 316 'engineered mutation' 316 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UDP 'RNA linking' . "URIDINE-5'-DIPHOSPHATE" ? 'C9 H14 N2 O12 P2' 404.161 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VS3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_percent_sol 58.1 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PROTEIN: 10 MM UDP-GAL, 10 MM MNCL2, 10 MM N-ACETYLLACTOSAMINE, MOTHER LIQUOR: 5-10 % PEG 6000, 0.1 M TRIS-HCL PH 8.0, 5-14 % MPD' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2006-09-04 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(III)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX10.1' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX10.1 _diffrn_source.pdbx_wavelength 0.9 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VS3 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.20 _reflns.number_obs 39855 _reflns.number_all ? _reflns.percent_possible_obs 94.9 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 9.70 _reflns.B_iso_Wilson_estimate 16.2 _reflns.pdbx_redundancy 8.9 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 86.2 _reflns_shell.Rmerge_I_obs 0.31 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.50 _reflns_shell.pdbx_redundancy 2.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VS3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 36204 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 403590.17 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.18 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 90.7 _refine.ls_R_factor_obs 0.215 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.224 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 2.1 _refine.ls_number_reflns_R_free 743 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 24.2 _refine.aniso_B[1][1] 4.44 _refine.aniso_B[2][2] 2.88 _refine.aniso_B[3][3] -7.31 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.24 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 36.3312 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 1K4V' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2VS3 _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.28 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free 0.26 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4786 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 104 _refine_hist.number_atoms_solvent 424 _refine_hist.number_atoms_total 5314 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 35.18 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.33 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 5128 _refine_ls_shell.R_factor_R_work 0.277 _refine_ls_shell.percent_reflns_obs 78.9 _refine_ls_shell.R_factor_R_free 0.240 _refine_ls_shell.R_factor_R_free_error 0.025 _refine_ls_shell.percent_reflns_R_free 1.7 _refine_ls_shell.number_reflns_R_free 90 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 UDP-NLC-GOL-GOL-2403.PAR UDP-NLC-GOL-GOL-2403.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP # _struct.entry_id 2VS3 _struct.title 'THE BINDING OF UDP-GALACTOSE BY AN ACTIVE SITE MUTANT OF alpha-1,3 GALACTOSYLTRANSFERASE (alpha3GT)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VS3 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;MANGANESE, TRANSFERASE, GLYCOPROTEIN, METAL-BINDING, ACTIVE-SITE MUTANT, GLYCOSYLTRANSFERASE, N-ACETYL LACTOSAMINE, SIGNAL-ANCHOR, TRANSMEMBRANE, GOLGI APPARATUS, GT, UDP, MEMBRANE, ALPHA3GT, GALACTOSE, ALPHA-3GT ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 5 ? TRP A 9 ? LYS A 84 TRP A 88 5 ? 5 HELX_P HELX_P2 2 ASN A 11 ? ARG A 15 ? ASN A 90 ARG A 94 5 ? 5 HELX_P HELX_P3 3 ASN A 35 ? GLN A 46 ? ASN A 114 GLN A 125 1 ? 12 HELX_P HELX_P4 4 ARG A 59 ? PHE A 76 ? ARG A 138 PHE A 155 1 ? 18 HELX_P HELX_P5 5 ASP A 90 ? MET A 94 ? ASP A 169 MET A 173 5 ? 5 HELX_P HELX_P6 6 ARG A 115 ? HIS A 134 ? ARG A 194 HIS A 213 1 ? 20 HELX_P HELX_P7 7 ILE A 135 ? GLU A 138 ? ILE A 214 GLU A 217 5 ? 4 HELX_P HELX_P8 8 GLY A 156 ? LEU A 160 ? GLY A 235 LEU A 239 5 ? 5 HELX_P HELX_P9 9 ASP A 175 ? PHE A 179 ? ASP A 254 PHE A 258 5 ? 5 HELX_P HELX_P10 10 THR A 208 ? ASN A 229 ? THR A 287 ASN A 308 1 ? 22 HELX_P HELX_P11 11 HIS A 236 ? ASN A 248 ? HIS A 315 ASN A 327 1 ? 13 HELX_P HELX_P12 12 PRO A 256 ? CYS A 259 ? PRO A 335 CYS A 338 5 ? 4 HELX_P HELX_P13 13 ASP A 261 ? GLY A 265 ? ASP A 340 GLY A 344 5 ? 5 HELX_P HELX_P14 14 GLU A 281 ? ARG A 286 ? GLU A 360 ARG A 365 1 ? 6 HELX_P HELX_P15 15 LYS B 5 ? PHE B 10 ? LYS B 84 PHE B 89 1 ? 6 HELX_P HELX_P16 16 ASN B 11 ? ARG B 15 ? ASN B 90 ARG B 94 5 ? 5 HELX_P HELX_P17 17 ASN B 35 ? GLN B 46 ? ASN B 114 GLN B 125 1 ? 12 HELX_P HELX_P18 18 ARG B 59 ? PHE B 76 ? ARG B 138 PHE B 155 1 ? 18 HELX_P HELX_P19 19 ARG B 115 ? VAL B 139 ? ARG B 194 VAL B 218 1 ? 25 HELX_P HELX_P20 20 GLY B 156 ? LEU B 160 ? GLY B 235 LEU B 239 5 ? 5 HELX_P HELX_P21 21 ASP B 175 ? PHE B 179 ? ASP B 254 PHE B 258 5 ? 5 HELX_P HELX_P22 22 THR B 208 ? ASN B 229 ? THR B 287 ASN B 308 1 ? 22 HELX_P HELX_P23 23 HIS B 236 ? ASN B 248 ? HIS B 315 ASN B 327 1 ? 13 HELX_P HELX_P24 24 PRO B 256 ? CYS B 259 ? PRO B 335 CYS B 338 5 ? 4 HELX_P HELX_P25 25 ASP B 261 ? GLY B 265 ? ASP B 340 GLY B 344 5 ? 5 HELX_P HELX_P26 26 GLU B 281 ? ARG B 286 ? GLU B 360 ARG B 365 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C NDG . O4 ? ? ? 1_555 C GAL . C1 ? ? C NDG 1 C GAL 2 1_555 ? ? ? ? ? ? ? 1.418 sing ? covale2 covale both ? D NDG . O4 ? ? ? 1_555 D GAL . C1 ? ? D NDG 1 D GAL 2 1_555 ? ? ? ? ? ? ? 1.430 sing ? metalc1 metalc ? ? A ASP 146 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 225 A MN 403 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc2 metalc ? ? A ASP 148 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 227 A MN 403 1_555 ? ? ? ? ? ? ? 2.251 ? ? metalc3 metalc ? ? A ASP 148 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 227 A MN 403 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc4 metalc ? ? E UDP . O1A ? ? ? 1_555 F MN . MN ? ? A UDP 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc5 metalc ? ? E UDP . O1B ? ? ? 1_555 F MN . MN ? ? A UDP 401 A MN 403 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc6 metalc ? ? F MN . MN ? ? ? 1_555 I HOH . O ? ? A MN 403 A HOH 648 1_555 ? ? ? ? ? ? ? 2.327 ? ? metalc7 metalc ? ? B ASP 146 OD2 ? ? ? 1_555 H MN . MN ? ? B ASP 225 B MN 403 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc8 metalc ? ? B ASP 148 OD1 ? ? ? 1_555 H MN . MN ? ? B ASP 227 B MN 403 1_555 ? ? ? ? ? ? ? 2.228 ? ? metalc9 metalc ? ? B ASP 148 OD2 ? ? ? 1_555 H MN . MN ? ? B ASP 227 B MN 403 1_555 ? ? ? ? ? ? ? 2.734 ? ? metalc10 metalc ? ? G UDP . O1A ? ? ? 1_555 H MN . MN ? ? B UDP 401 B MN 403 1_555 ? ? ? ? ? ? ? 2.238 ? ? metalc11 metalc ? ? G UDP . O1B ? ? ? 1_555 H MN . MN ? ? B UDP 401 B MN 403 1_555 ? ? ? ? ? ? ? 2.144 ? ? metalc12 metalc ? ? H MN . MN ? ? ? 1_555 J HOH . O ? ? B MN 403 B HOH 615 1_555 ? ? ? ? ? ? ? 2.383 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 8 ? AB ? 2 ? BA ? 8 ? BB ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? parallel AA 6 7 ? parallel AA 7 8 ? parallel AB 1 2 ? anti-parallel BA 1 2 ? parallel BA 2 3 ? parallel BA 3 4 ? anti-parallel BA 4 5 ? anti-parallel BA 5 6 ? parallel BA 6 7 ? parallel BA 7 8 ? parallel BB 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 28 ? VAL A 29 ? VAL A 107 VAL A 108 AA 2 LYS A 252 ? LEU A 254 ? LYS A 331 LEU A 333 AA 3 SER A 163 ? LEU A 167 ? SER A 242 LEU A 246 AA 4 TYR A 200 ? GLY A 207 ? TYR A 279 GLY A 286 AA 5 PHE A 141 ? MET A 145 ? PHE A 220 MET A 224 AA 6 VAL A 50 ? ALA A 56 ? VAL A 129 ALA A 135 AA 7 VAL A 82 ? VAL A 88 ? VAL A 161 VAL A 167 AA 8 ARG A 103 ? LYS A 109 ? ARG A 182 LYS A 188 AB 1 GLN A 149 ? PHE A 151 ? GLN A 228 PHE A 230 AB 2 MET A 275 ? TRP A 277 ? MET A 354 TRP A 356 BA 1 VAL B 28 ? VAL B 29 ? VAL B 107 VAL B 108 BA 2 LYS B 252 ? LEU B 254 ? LYS B 331 LEU B 333 BA 3 SER B 163 ? LEU B 167 ? SER B 242 LEU B 246 BA 4 TYR B 200 ? GLY B 207 ? TYR B 279 GLY B 286 BA 5 PHE B 141 ? MET B 145 ? PHE B 220 MET B 224 BA 6 VAL B 50 ? ALA B 56 ? VAL B 129 ALA B 135 BA 7 VAL B 82 ? VAL B 88 ? VAL B 161 VAL B 167 BA 8 ARG B 103 ? LYS B 109 ? ARG B 182 LYS B 188 BB 1 GLN B 149 ? PHE B 151 ? GLN B 228 PHE B 230 BB 2 MET B 275 ? TRP B 277 ? MET B 354 TRP B 356 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 29 ? N VAL A 108 O ILE A 253 ? O ILE A 332 AA 2 3 N LYS A 252 ? N LYS A 331 O SER A 163 ? O SER A 242 AA 3 4 O GLN A 166 ? O GLN A 245 N HIS A 201 ? N HIS A 280 AA 4 5 N GLY A 207 ? N GLY A 286 O LEU A 142 ? O LEU A 221 AA 5 6 N PHE A 143 ? N PHE A 222 O GLY A 51 ? O GLY A 130 AA 6 7 N LEU A 52 ? N LEU A 131 O ILE A 83 ? O ILE A 162 AA 7 8 N PHE A 84 ? N PHE A 163 O SER A 104 ? O SER A 183 AB 1 2 N VAL A 150 ? N VAL A 229 O SER A 276 ? O SER A 355 BA 1 2 N VAL B 29 ? N VAL B 108 O ILE B 253 ? O ILE B 332 BA 2 3 N LYS B 252 ? N LYS B 331 O SER B 163 ? O SER B 242 BA 3 4 O GLN B 166 ? O GLN B 245 N HIS B 201 ? N HIS B 280 BA 4 5 N GLY B 207 ? N GLY B 286 O LEU B 142 ? O LEU B 221 BA 5 6 N PHE B 143 ? N PHE B 222 O GLY B 51 ? O GLY B 130 BA 6 7 N LEU B 52 ? N LEU B 131 O ILE B 83 ? O ILE B 162 BA 7 8 N PHE B 84 ? N PHE B 163 O SER B 104 ? O SER B 183 BB 1 2 N VAL B 150 ? N VAL B 229 O SER B 276 ? O SER B 355 # _database_PDB_matrix.entry_id 2VS3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VS3 _atom_sites.fract_transf_matrix[1][1] 0.022165 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003630 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010595 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010673 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NDG C 1 HAS WRONG CHIRALITY AT ATOM C1' 2 'NDG D 1 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 80 ? ? ? A . n A 1 2 SER 2 81 ? ? ? A . n A 1 3 LYS 3 82 82 LYS LYS A . n A 1 4 LEU 4 83 83 LEU LEU A . n A 1 5 LYS 5 84 84 LYS LYS A . n A 1 6 LEU 6 85 85 LEU LEU A . n A 1 7 SER 7 86 86 SER SER A . n A 1 8 ASP 8 87 87 ASP ASP A . n A 1 9 TRP 9 88 88 TRP TRP A . n A 1 10 PHE 10 89 89 PHE PHE A . n A 1 11 ASN 11 90 90 ASN ASN A . n A 1 12 PRO 12 91 91 PRO PRO A . n A 1 13 PHE 13 92 92 PHE PHE A . n A 1 14 LYS 14 93 93 LYS LYS A . n A 1 15 ARG 15 94 94 ARG ARG A . n A 1 16 PRO 16 95 95 PRO PRO A . n A 1 17 GLU 17 96 96 GLU GLU A . n A 1 18 VAL 18 97 97 VAL VAL A . n A 1 19 VAL 19 98 98 VAL VAL A . n A 1 20 THR 20 99 99 THR THR A . n A 1 21 MET 21 100 100 MET MET A . n A 1 22 THR 22 101 101 THR THR A . n A 1 23 LYS 23 102 102 LYS LYS A . n A 1 24 TRP 24 103 103 TRP TRP A . n A 1 25 LYS 25 104 104 LYS LYS A . n A 1 26 ALA 26 105 105 ALA ALA A . n A 1 27 PRO 27 106 106 PRO PRO A . n A 1 28 VAL 28 107 107 VAL VAL A . n A 1 29 VAL 29 108 108 VAL VAL A . n A 1 30 TRP 30 109 109 TRP TRP A . n A 1 31 GLU 31 110 110 GLU GLU A . n A 1 32 GLY 32 111 111 GLY GLY A . n A 1 33 THR 33 112 112 THR THR A . n A 1 34 TYR 34 113 113 TYR TYR A . n A 1 35 ASN 35 114 114 ASN ASN A . n A 1 36 ARG 36 115 115 ARG ARG A . n A 1 37 ALA 37 116 116 ALA ALA A . n A 1 38 VAL 38 117 117 VAL VAL A . n A 1 39 LEU 39 118 118 LEU LEU A . n A 1 40 ASP 40 119 119 ASP ASP A . n A 1 41 ASN 41 120 120 ASN ASN A . n A 1 42 TYR 42 121 121 TYR TYR A . n A 1 43 TYR 43 122 122 TYR TYR A . n A 1 44 ALA 44 123 123 ALA ALA A . n A 1 45 LYS 45 124 124 LYS LYS A . n A 1 46 GLN 46 125 125 GLN GLN A . n A 1 47 LYS 47 126 126 LYS LYS A . n A 1 48 ILE 48 127 127 ILE ILE A . n A 1 49 THR 49 128 128 THR THR A . n A 1 50 VAL 50 129 129 VAL VAL A . n A 1 51 GLY 51 130 130 GLY GLY A . n A 1 52 LEU 52 131 131 LEU LEU A . n A 1 53 THR 53 132 132 THR THR A . n A 1 54 VAL 54 133 133 VAL VAL A . n A 1 55 PHE 55 134 134 PHE PHE A . n A 1 56 ALA 56 135 135 ALA ALA A . n A 1 57 VAL 57 136 136 VAL VAL A . n A 1 58 GLY 58 137 137 GLY GLY A . n A 1 59 ARG 59 138 138 ARG ARG A . n A 1 60 TYR 60 139 139 TYR TYR A . n A 1 61 ILE 61 140 140 ILE ILE A . n A 1 62 GLU 62 141 141 GLU GLU A . n A 1 63 HIS 63 142 142 HIS HIS A . n A 1 64 TYR 64 143 143 TYR TYR A . n A 1 65 LEU 65 144 144 LEU LEU A . n A 1 66 GLU 66 145 145 GLU GLU A . n A 1 67 GLU 67 146 146 GLU GLU A . n A 1 68 PHE 68 147 147 PHE PHE A . n A 1 69 LEU 69 148 148 LEU LEU A . n A 1 70 THR 70 149 149 THR THR A . n A 1 71 SER 71 150 150 SER SER A . n A 1 72 ALA 72 151 151 ALA ALA A . n A 1 73 ASN 73 152 152 ASN ASN A . n A 1 74 LYS 74 153 153 LYS LYS A . n A 1 75 HIS 75 154 154 HIS HIS A . n A 1 76 PHE 76 155 155 PHE PHE A . n A 1 77 MET 77 156 156 MET MET A . n A 1 78 VAL 78 157 157 VAL VAL A . n A 1 79 GLY 79 158 158 GLY GLY A . n A 1 80 HIS 80 159 159 HIS HIS A . n A 1 81 PRO 81 160 160 PRO PRO A . n A 1 82 VAL 82 161 161 VAL VAL A . n A 1 83 ILE 83 162 162 ILE ILE A . n A 1 84 PHE 84 163 163 PHE PHE A . n A 1 85 TYR 85 164 164 TYR TYR A . n A 1 86 ILE 86 165 165 ILE ILE A . n A 1 87 MET 87 166 166 MET MET A . n A 1 88 VAL 88 167 167 VAL VAL A . n A 1 89 ASP 89 168 168 ASP ASP A . n A 1 90 ASP 90 169 169 ASP ASP A . n A 1 91 VAL 91 170 170 VAL VAL A . n A 1 92 SER 92 171 171 SER SER A . n A 1 93 ARG 93 172 172 ARG ARG A . n A 1 94 MET 94 173 173 MET MET A . n A 1 95 PRO 95 174 174 PRO PRO A . n A 1 96 LEU 96 175 175 LEU LEU A . n A 1 97 ILE 97 176 176 ILE ILE A . n A 1 98 GLU 98 177 177 GLU GLU A . n A 1 99 LEU 99 178 178 LEU LEU A . n A 1 100 GLY 100 179 179 GLY GLY A . n A 1 101 PRO 101 180 180 PRO PRO A . n A 1 102 LEU 102 181 181 LEU LEU A . n A 1 103 ARG 103 182 182 ARG ARG A . n A 1 104 SER 104 183 183 SER SER A . n A 1 105 PHE 105 184 184 PHE PHE A . n A 1 106 LYS 106 185 185 LYS LYS A . n A 1 107 VAL 107 186 186 VAL VAL A . n A 1 108 PHE 108 187 187 PHE PHE A . n A 1 109 LYS 109 188 188 LYS LYS A . n A 1 110 ILE 110 189 189 ILE ILE A . n A 1 111 LYS 111 190 190 LYS LYS A . n A 1 112 PRO 112 191 191 PRO PRO A . n A 1 113 GLU 113 192 192 GLU GLU A . n A 1 114 LYS 114 193 193 LYS LYS A . n A 1 115 ARG 115 194 194 ARG ARG A . n A 1 116 TRP 116 195 195 TRP TRP A . n A 1 117 GLN 117 196 196 GLN GLN A . n A 1 118 ASP 118 197 197 ASP ASP A . n A 1 119 ILE 119 198 198 ILE ILE A . n A 1 120 SER 120 199 199 SER SER A . n A 1 121 MET 121 200 200 MET MET A . n A 1 122 MET 122 201 201 MET MET A . n A 1 123 ARG 123 202 202 ARG ARG A . n A 1 124 MET 124 203 203 MET MET A . n A 1 125 LYS 125 204 204 LYS LYS A . n A 1 126 THR 126 205 205 THR THR A . n A 1 127 ILE 127 206 206 ILE ILE A . n A 1 128 GLY 128 207 207 GLY GLY A . n A 1 129 GLU 129 208 208 GLU GLU A . n A 1 130 HIS 130 209 209 HIS HIS A . n A 1 131 ILE 131 210 210 ILE ILE A . n A 1 132 VAL 132 211 211 VAL VAL A . n A 1 133 ALA 133 212 212 ALA ALA A . n A 1 134 HIS 134 213 213 HIS HIS A . n A 1 135 ILE 135 214 214 ILE ILE A . n A 1 136 GLN 136 215 215 GLN GLN A . n A 1 137 HIS 137 216 216 HIS HIS A . n A 1 138 GLU 138 217 217 GLU GLU A . n A 1 139 VAL 139 218 218 VAL VAL A . n A 1 140 ASP 140 219 219 ASP ASP A . n A 1 141 PHE 141 220 220 PHE PHE A . n A 1 142 LEU 142 221 221 LEU LEU A . n A 1 143 PHE 143 222 222 PHE PHE A . n A 1 144 CYS 144 223 223 CYS CYS A . n A 1 145 MET 145 224 224 MET MET A . n A 1 146 ASP 146 225 225 ASP ASP A . n A 1 147 VAL 147 226 226 VAL VAL A . n A 1 148 ASP 148 227 227 ASP ASP A . n A 1 149 GLN 149 228 228 GLN GLN A . n A 1 150 VAL 150 229 229 VAL VAL A . n A 1 151 PHE 151 230 230 PHE PHE A . n A 1 152 GLN 152 231 231 GLN GLN A . n A 1 153 ASP 153 232 232 ASP ASP A . n A 1 154 LYS 154 233 233 LYS LYS A . n A 1 155 PHE 155 234 234 PHE PHE A . n A 1 156 GLY 156 235 235 GLY GLY A . n A 1 157 VAL 157 236 236 VAL VAL A . n A 1 158 GLU 158 237 237 GLU GLU A . n A 1 159 THR 159 238 238 THR THR A . n A 1 160 LEU 160 239 239 LEU LEU A . n A 1 161 GLY 161 240 240 GLY GLY A . n A 1 162 GLU 162 241 241 GLU GLU A . n A 1 163 SER 163 242 242 SER SER A . n A 1 164 VAL 164 243 243 VAL VAL A . n A 1 165 ALA 165 244 244 ALA ALA A . n A 1 166 GLN 166 245 245 GLN GLN A . n A 1 167 LEU 167 246 246 LEU LEU A . n A 1 168 GLN 168 247 247 GLN GLN A . n A 1 169 ALA 169 248 248 ALA ALA A . n A 1 170 TRP 170 249 249 TRP TRP A . n A 1 171 TRP 171 250 250 TRP TRP A . n A 1 172 TYR 172 251 251 TYR TYR A . n A 1 173 LYS 173 252 252 LYS LYS A . n A 1 174 ALA 174 253 253 ALA ALA A . n A 1 175 ASP 175 254 254 ASP ASP A . n A 1 176 PRO 176 255 255 PRO PRO A . n A 1 177 ASN 177 256 256 ASN ASN A . n A 1 178 ASP 178 257 257 ASP ASP A . n A 1 179 PHE 179 258 258 PHE PHE A . n A 1 180 THR 180 259 259 THR THR A . n A 1 181 TYR 181 260 260 TYR TYR A . n A 1 182 GLU 182 261 261 GLU GLU A . n A 1 183 ARG 183 262 262 ARG ARG A . n A 1 184 ARG 184 263 263 ARG ARG A . n A 1 185 LYS 185 264 264 LYS LYS A . n A 1 186 GLU 186 265 265 GLU GLU A . n A 1 187 SER 187 266 266 SER SER A . n A 1 188 ALA 188 267 267 ALA ALA A . n A 1 189 ALA 189 268 268 ALA ALA A . n A 1 190 TYR 190 269 269 TYR TYR A . n A 1 191 ILE 191 270 270 ILE ILE A . n A 1 192 PRO 192 271 271 PRO PRO A . n A 1 193 PHE 193 272 272 PHE PHE A . n A 1 194 GLY 194 273 273 GLY GLY A . n A 1 195 GLU 195 274 274 GLU GLU A . n A 1 196 GLY 196 275 275 GLY GLY A . n A 1 197 ASP 197 276 276 ASP ASP A . n A 1 198 PHE 198 277 277 PHE PHE A . n A 1 199 TYR 199 278 278 TYR TYR A . n A 1 200 TYR 200 279 279 TYR TYR A . n A 1 201 HIS 201 280 280 HIS HIS A . n A 1 202 ALA 202 281 281 ALA ALA A . n A 1 203 ALA 203 282 282 ALA ALA A . n A 1 204 ILE 204 283 283 ILE ILE A . n A 1 205 PHE 205 284 284 PHE PHE A . n A 1 206 GLY 206 285 285 GLY GLY A . n A 1 207 GLY 207 286 286 GLY GLY A . n A 1 208 THR 208 287 287 THR THR A . n A 1 209 PRO 209 288 288 PRO PRO A . n A 1 210 THR 210 289 289 THR THR A . n A 1 211 GLN 211 290 290 GLN GLN A . n A 1 212 VAL 212 291 291 VAL VAL A . n A 1 213 LEU 213 292 292 LEU LEU A . n A 1 214 ASN 214 293 293 ASN ASN A . n A 1 215 ILE 215 294 294 ILE ILE A . n A 1 216 THR 216 295 295 THR THR A . n A 1 217 GLN 217 296 296 GLN GLN A . n A 1 218 GLU 218 297 297 GLU GLU A . n A 1 219 CYS 219 298 298 CYS CYS A . n A 1 220 PHE 220 299 299 PHE PHE A . n A 1 221 LYS 221 300 300 LYS LYS A . n A 1 222 GLY 222 301 301 GLY GLY A . n A 1 223 ILE 223 302 302 ILE ILE A . n A 1 224 LEU 224 303 303 LEU LEU A . n A 1 225 LYS 225 304 304 LYS LYS A . n A 1 226 ASP 226 305 305 ASP ASP A . n A 1 227 LYS 227 306 306 LYS LYS A . n A 1 228 LYS 228 307 307 LYS LYS A . n A 1 229 ASN 229 308 308 ASN ASN A . n A 1 230 ASP 230 309 309 ASP ASP A . n A 1 231 ILE 231 310 310 ILE ILE A . n A 1 232 GLU 232 311 311 GLU GLU A . n A 1 233 ALA 233 312 312 ALA ALA A . n A 1 234 GLN 234 313 313 GLN GLN A . n A 1 235 TRP 235 314 314 TRP TRP A . n A 1 236 HIS 236 315 315 HIS HIS A . n A 1 237 ASN 237 316 316 ASN ASN A . n A 1 238 GLU 238 317 317 GLU GLU A . n A 1 239 SER 239 318 318 SER SER A . n A 1 240 HIS 240 319 319 HIS HIS A . n A 1 241 LEU 241 320 320 LEU LEU A . n A 1 242 ASN 242 321 321 ASN ASN A . n A 1 243 LYS 243 322 322 LYS LYS A . n A 1 244 TYR 244 323 323 TYR TYR A . n A 1 245 PHE 245 324 324 PHE PHE A . n A 1 246 LEU 246 325 325 LEU LEU A . n A 1 247 LEU 247 326 326 LEU LEU A . n A 1 248 ASN 248 327 327 ASN ASN A . n A 1 249 LYS 249 328 328 LYS LYS A . n A 1 250 PRO 250 329 329 PRO PRO A . n A 1 251 THR 251 330 330 THR THR A . n A 1 252 LYS 252 331 331 LYS LYS A . n A 1 253 ILE 253 332 332 ILE ILE A . n A 1 254 LEU 254 333 333 LEU LEU A . n A 1 255 SER 255 334 334 SER SER A . n A 1 256 PRO 256 335 335 PRO PRO A . n A 1 257 GLU 257 336 336 GLU GLU A . n A 1 258 TYR 258 337 337 TYR TYR A . n A 1 259 CYS 259 338 338 CYS CYS A . n A 1 260 TRP 260 339 339 TRP TRP A . n A 1 261 ASP 261 340 340 ASP ASP A . n A 1 262 TYR 262 341 341 TYR TYR A . n A 1 263 HIS 263 342 342 HIS HIS A . n A 1 264 ILE 264 343 343 ILE ILE A . n A 1 265 GLY 265 344 344 GLY GLY A . n A 1 266 LEU 266 345 345 LEU LEU A . n A 1 267 PRO 267 346 346 PRO PRO A . n A 1 268 ALA 268 347 347 ALA ALA A . n A 1 269 ASP 269 348 348 ASP ASP A . n A 1 270 ILE 270 349 349 ILE ILE A . n A 1 271 LYS 271 350 350 LYS LYS A . n A 1 272 LEU 272 351 351 LEU LEU A . n A 1 273 VAL 273 352 352 VAL VAL A . n A 1 274 LYS 274 353 353 LYS LYS A . n A 1 275 MET 275 354 354 MET MET A . n A 1 276 SER 276 355 355 SER SER A . n A 1 277 TRP 277 356 356 TRP TRP A . n A 1 278 GLN 278 357 357 GLN GLN A . n A 1 279 THR 279 358 358 THR THR A . n A 1 280 LYS 280 359 359 LYS LYS A . n A 1 281 GLU 281 360 360 GLU GLU A . n A 1 282 TYR 282 361 361 TYR TYR A . n A 1 283 ASN 283 362 362 ASN ASN A . n A 1 284 VAL 284 363 363 VAL VAL A . n A 1 285 VAL 285 364 364 VAL VAL A . n A 1 286 ARG 286 365 365 ARG ARG A . n A 1 287 ASN 287 366 366 ASN ASN A . n A 1 288 ASN 288 367 367 ASN ASN A . n A 1 289 VAL 289 368 368 VAL VAL A . n B 1 1 GLU 1 80 ? ? ? B . n B 1 2 SER 2 81 ? ? ? B . n B 1 3 LYS 3 82 82 LYS LYS B . n B 1 4 LEU 4 83 83 LEU LEU B . n B 1 5 LYS 5 84 84 LYS LYS B . n B 1 6 LEU 6 85 85 LEU LEU B . n B 1 7 SER 7 86 86 SER SER B . n B 1 8 ASP 8 87 87 ASP ASP B . n B 1 9 TRP 9 88 88 TRP TRP B . n B 1 10 PHE 10 89 89 PHE PHE B . n B 1 11 ASN 11 90 90 ASN ASN B . n B 1 12 PRO 12 91 91 PRO PRO B . n B 1 13 PHE 13 92 92 PHE PHE B . n B 1 14 LYS 14 93 93 LYS LYS B . n B 1 15 ARG 15 94 94 ARG ARG B . n B 1 16 PRO 16 95 95 PRO PRO B . n B 1 17 GLU 17 96 96 GLU GLU B . n B 1 18 VAL 18 97 97 VAL VAL B . n B 1 19 VAL 19 98 98 VAL VAL B . n B 1 20 THR 20 99 99 THR THR B . n B 1 21 MET 21 100 100 MET MET B . n B 1 22 THR 22 101 101 THR THR B . n B 1 23 LYS 23 102 102 LYS LYS B . n B 1 24 TRP 24 103 103 TRP TRP B . n B 1 25 LYS 25 104 104 LYS LYS B . n B 1 26 ALA 26 105 105 ALA ALA B . n B 1 27 PRO 27 106 106 PRO PRO B . n B 1 28 VAL 28 107 107 VAL VAL B . n B 1 29 VAL 29 108 108 VAL VAL B . n B 1 30 TRP 30 109 109 TRP TRP B . n B 1 31 GLU 31 110 110 GLU GLU B . n B 1 32 GLY 32 111 111 GLY GLY B . n B 1 33 THR 33 112 112 THR THR B . n B 1 34 TYR 34 113 113 TYR TYR B . n B 1 35 ASN 35 114 114 ASN ASN B . n B 1 36 ARG 36 115 115 ARG ARG B . n B 1 37 ALA 37 116 116 ALA ALA B . n B 1 38 VAL 38 117 117 VAL VAL B . n B 1 39 LEU 39 118 118 LEU LEU B . n B 1 40 ASP 40 119 119 ASP ASP B . n B 1 41 ASN 41 120 120 ASN ASN B . n B 1 42 TYR 42 121 121 TYR TYR B . n B 1 43 TYR 43 122 122 TYR TYR B . n B 1 44 ALA 44 123 123 ALA ALA B . n B 1 45 LYS 45 124 124 LYS LYS B . n B 1 46 GLN 46 125 125 GLN GLN B . n B 1 47 LYS 47 126 126 LYS LYS B . n B 1 48 ILE 48 127 127 ILE ILE B . n B 1 49 THR 49 128 128 THR THR B . n B 1 50 VAL 50 129 129 VAL VAL B . n B 1 51 GLY 51 130 130 GLY GLY B . n B 1 52 LEU 52 131 131 LEU LEU B . n B 1 53 THR 53 132 132 THR THR B . n B 1 54 VAL 54 133 133 VAL VAL B . n B 1 55 PHE 55 134 134 PHE PHE B . n B 1 56 ALA 56 135 135 ALA ALA B . n B 1 57 VAL 57 136 136 VAL VAL B . n B 1 58 GLY 58 137 137 GLY GLY B . n B 1 59 ARG 59 138 138 ARG ARG B . n B 1 60 TYR 60 139 139 TYR TYR B . n B 1 61 ILE 61 140 140 ILE ILE B . n B 1 62 GLU 62 141 141 GLU GLU B . n B 1 63 HIS 63 142 142 HIS HIS B . n B 1 64 TYR 64 143 143 TYR TYR B . n B 1 65 LEU 65 144 144 LEU LEU B . n B 1 66 GLU 66 145 145 GLU GLU B . n B 1 67 GLU 67 146 146 GLU GLU B . n B 1 68 PHE 68 147 147 PHE PHE B . n B 1 69 LEU 69 148 148 LEU LEU B . n B 1 70 THR 70 149 149 THR THR B . n B 1 71 SER 71 150 150 SER SER B . n B 1 72 ALA 72 151 151 ALA ALA B . n B 1 73 ASN 73 152 152 ASN ASN B . n B 1 74 LYS 74 153 153 LYS LYS B . n B 1 75 HIS 75 154 154 HIS HIS B . n B 1 76 PHE 76 155 155 PHE PHE B . n B 1 77 MET 77 156 156 MET MET B . n B 1 78 VAL 78 157 157 VAL VAL B . n B 1 79 GLY 79 158 158 GLY GLY B . n B 1 80 HIS 80 159 159 HIS HIS B . n B 1 81 PRO 81 160 160 PRO PRO B . n B 1 82 VAL 82 161 161 VAL VAL B . n B 1 83 ILE 83 162 162 ILE ILE B . n B 1 84 PHE 84 163 163 PHE PHE B . n B 1 85 TYR 85 164 164 TYR TYR B . n B 1 86 ILE 86 165 165 ILE ILE B . n B 1 87 MET 87 166 166 MET MET B . n B 1 88 VAL 88 167 167 VAL VAL B . n B 1 89 ASP 89 168 168 ASP ASP B . n B 1 90 ASP 90 169 169 ASP ASP B . n B 1 91 VAL 91 170 170 VAL VAL B . n B 1 92 SER 92 171 171 SER SER B . n B 1 93 ARG 93 172 172 ARG ARG B . n B 1 94 MET 94 173 173 MET MET B . n B 1 95 PRO 95 174 174 PRO PRO B . n B 1 96 LEU 96 175 175 LEU LEU B . n B 1 97 ILE 97 176 176 ILE ILE B . n B 1 98 GLU 98 177 177 GLU GLU B . n B 1 99 LEU 99 178 178 LEU LEU B . n B 1 100 GLY 100 179 179 GLY GLY B . n B 1 101 PRO 101 180 180 PRO PRO B . n B 1 102 LEU 102 181 181 LEU LEU B . n B 1 103 ARG 103 182 182 ARG ARG B . n B 1 104 SER 104 183 183 SER SER B . n B 1 105 PHE 105 184 184 PHE PHE B . n B 1 106 LYS 106 185 185 LYS LYS B . n B 1 107 VAL 107 186 186 VAL VAL B . n B 1 108 PHE 108 187 187 PHE PHE B . n B 1 109 LYS 109 188 188 LYS LYS B . n B 1 110 ILE 110 189 189 ILE ILE B . n B 1 111 LYS 111 190 190 LYS LYS B . n B 1 112 PRO 112 191 191 PRO PRO B . n B 1 113 GLU 113 192 192 GLU GLU B . n B 1 114 LYS 114 193 193 LYS LYS B . n B 1 115 ARG 115 194 194 ARG ARG B . n B 1 116 TRP 116 195 195 TRP TRP B . n B 1 117 GLN 117 196 196 GLN GLN B . n B 1 118 ASP 118 197 197 ASP ASP B . n B 1 119 ILE 119 198 198 ILE ILE B . n B 1 120 SER 120 199 199 SER SER B . n B 1 121 MET 121 200 200 MET MET B . n B 1 122 MET 122 201 201 MET MET B . n B 1 123 ARG 123 202 202 ARG ARG B . n B 1 124 MET 124 203 203 MET MET B . n B 1 125 LYS 125 204 204 LYS LYS B . n B 1 126 THR 126 205 205 THR THR B . n B 1 127 ILE 127 206 206 ILE ILE B . n B 1 128 GLY 128 207 207 GLY GLY B . n B 1 129 GLU 129 208 208 GLU GLU B . n B 1 130 HIS 130 209 209 HIS HIS B . n B 1 131 ILE 131 210 210 ILE ILE B . n B 1 132 VAL 132 211 211 VAL VAL B . n B 1 133 ALA 133 212 212 ALA ALA B . n B 1 134 HIS 134 213 213 HIS HIS B . n B 1 135 ILE 135 214 214 ILE ILE B . n B 1 136 GLN 136 215 215 GLN GLN B . n B 1 137 HIS 137 216 216 HIS HIS B . n B 1 138 GLU 138 217 217 GLU GLU B . n B 1 139 VAL 139 218 218 VAL VAL B . n B 1 140 ASP 140 219 219 ASP ASP B . n B 1 141 PHE 141 220 220 PHE PHE B . n B 1 142 LEU 142 221 221 LEU LEU B . n B 1 143 PHE 143 222 222 PHE PHE B . n B 1 144 CYS 144 223 223 CYS CYS B . n B 1 145 MET 145 224 224 MET MET B . n B 1 146 ASP 146 225 225 ASP ASP B . n B 1 147 VAL 147 226 226 VAL VAL B . n B 1 148 ASP 148 227 227 ASP ASP B . n B 1 149 GLN 149 228 228 GLN GLN B . n B 1 150 VAL 150 229 229 VAL VAL B . n B 1 151 PHE 151 230 230 PHE PHE B . n B 1 152 GLN 152 231 231 GLN GLN B . n B 1 153 ASP 153 232 232 ASP ASP B . n B 1 154 LYS 154 233 233 LYS LYS B . n B 1 155 PHE 155 234 234 PHE PHE B . n B 1 156 GLY 156 235 235 GLY GLY B . n B 1 157 VAL 157 236 236 VAL VAL B . n B 1 158 GLU 158 237 237 GLU GLU B . n B 1 159 THR 159 238 238 THR THR B . n B 1 160 LEU 160 239 239 LEU LEU B . n B 1 161 GLY 161 240 240 GLY GLY B . n B 1 162 GLU 162 241 241 GLU GLU B . n B 1 163 SER 163 242 242 SER SER B . n B 1 164 VAL 164 243 243 VAL VAL B . n B 1 165 ALA 165 244 244 ALA ALA B . n B 1 166 GLN 166 245 245 GLN GLN B . n B 1 167 LEU 167 246 246 LEU LEU B . n B 1 168 GLN 168 247 247 GLN GLN B . n B 1 169 ALA 169 248 248 ALA ALA B . n B 1 170 TRP 170 249 249 TRP TRP B . n B 1 171 TRP 171 250 250 TRP TRP B . n B 1 172 TYR 172 251 251 TYR TYR B . n B 1 173 LYS 173 252 252 LYS LYS B . n B 1 174 ALA 174 253 253 ALA ALA B . n B 1 175 ASP 175 254 254 ASP ASP B . n B 1 176 PRO 176 255 255 PRO PRO B . n B 1 177 ASN 177 256 256 ASN ASN B . n B 1 178 ASP 178 257 257 ASP ASP B . n B 1 179 PHE 179 258 258 PHE PHE B . n B 1 180 THR 180 259 259 THR THR B . n B 1 181 TYR 181 260 260 TYR TYR B . n B 1 182 GLU 182 261 261 GLU GLU B . n B 1 183 ARG 183 262 262 ARG ARG B . n B 1 184 ARG 184 263 263 ARG ARG B . n B 1 185 LYS 185 264 264 LYS LYS B . n B 1 186 GLU 186 265 265 GLU GLU B . n B 1 187 SER 187 266 266 SER SER B . n B 1 188 ALA 188 267 267 ALA ALA B . n B 1 189 ALA 189 268 268 ALA ALA B . n B 1 190 TYR 190 269 269 TYR TYR B . n B 1 191 ILE 191 270 270 ILE ILE B . n B 1 192 PRO 192 271 271 PRO PRO B . n B 1 193 PHE 193 272 272 PHE PHE B . n B 1 194 GLY 194 273 273 GLY GLY B . n B 1 195 GLU 195 274 274 GLU GLU B . n B 1 196 GLY 196 275 275 GLY GLY B . n B 1 197 ASP 197 276 276 ASP ASP B . n B 1 198 PHE 198 277 277 PHE PHE B . n B 1 199 TYR 199 278 278 TYR TYR B . n B 1 200 TYR 200 279 279 TYR TYR B . n B 1 201 HIS 201 280 280 HIS HIS B . n B 1 202 ALA 202 281 281 ALA ALA B . n B 1 203 ALA 203 282 282 ALA ALA B . n B 1 204 ILE 204 283 283 ILE ILE B . n B 1 205 PHE 205 284 284 PHE PHE B . n B 1 206 GLY 206 285 285 GLY GLY B . n B 1 207 GLY 207 286 286 GLY GLY B . n B 1 208 THR 208 287 287 THR THR B . n B 1 209 PRO 209 288 288 PRO PRO B . n B 1 210 THR 210 289 289 THR THR B . n B 1 211 GLN 211 290 290 GLN GLN B . n B 1 212 VAL 212 291 291 VAL VAL B . n B 1 213 LEU 213 292 292 LEU LEU B . n B 1 214 ASN 214 293 293 ASN ASN B . n B 1 215 ILE 215 294 294 ILE ILE B . n B 1 216 THR 216 295 295 THR THR B . n B 1 217 GLN 217 296 296 GLN GLN B . n B 1 218 GLU 218 297 297 GLU GLU B . n B 1 219 CYS 219 298 298 CYS CYS B . n B 1 220 PHE 220 299 299 PHE PHE B . n B 1 221 LYS 221 300 300 LYS LYS B . n B 1 222 GLY 222 301 301 GLY GLY B . n B 1 223 ILE 223 302 302 ILE ILE B . n B 1 224 LEU 224 303 303 LEU LEU B . n B 1 225 LYS 225 304 304 LYS LYS B . n B 1 226 ASP 226 305 305 ASP ASP B . n B 1 227 LYS 227 306 306 LYS LYS B . n B 1 228 LYS 228 307 307 LYS LYS B . n B 1 229 ASN 229 308 308 ASN ASN B . n B 1 230 ASP 230 309 309 ASP ASP B . n B 1 231 ILE 231 310 310 ILE ILE B . n B 1 232 GLU 232 311 311 GLU GLU B . n B 1 233 ALA 233 312 312 ALA ALA B . n B 1 234 GLN 234 313 313 GLN GLN B . n B 1 235 TRP 235 314 314 TRP TRP B . n B 1 236 HIS 236 315 315 HIS HIS B . n B 1 237 ASN 237 316 316 ASN ASN B . n B 1 238 GLU 238 317 317 GLU GLU B . n B 1 239 SER 239 318 318 SER SER B . n B 1 240 HIS 240 319 319 HIS HIS B . n B 1 241 LEU 241 320 320 LEU LEU B . n B 1 242 ASN 242 321 321 ASN ASN B . n B 1 243 LYS 243 322 322 LYS LYS B . n B 1 244 TYR 244 323 323 TYR TYR B . n B 1 245 PHE 245 324 324 PHE PHE B . n B 1 246 LEU 246 325 325 LEU LEU B . n B 1 247 LEU 247 326 326 LEU LEU B . n B 1 248 ASN 248 327 327 ASN ASN B . n B 1 249 LYS 249 328 328 LYS LYS B . n B 1 250 PRO 250 329 329 PRO PRO B . n B 1 251 THR 251 330 330 THR THR B . n B 1 252 LYS 252 331 331 LYS LYS B . n B 1 253 ILE 253 332 332 ILE ILE B . n B 1 254 LEU 254 333 333 LEU LEU B . n B 1 255 SER 255 334 334 SER SER B . n B 1 256 PRO 256 335 335 PRO PRO B . n B 1 257 GLU 257 336 336 GLU GLU B . n B 1 258 TYR 258 337 337 TYR TYR B . n B 1 259 CYS 259 338 338 CYS CYS B . n B 1 260 TRP 260 339 339 TRP TRP B . n B 1 261 ASP 261 340 340 ASP ASP B . n B 1 262 TYR 262 341 341 TYR TYR B . n B 1 263 HIS 263 342 342 HIS HIS B . n B 1 264 ILE 264 343 343 ILE ILE B . n B 1 265 GLY 265 344 344 GLY GLY B . n B 1 266 LEU 266 345 345 LEU LEU B . n B 1 267 PRO 267 346 346 PRO PRO B . n B 1 268 ALA 268 347 347 ALA ALA B . n B 1 269 ASP 269 348 348 ASP ASP B . n B 1 270 ILE 270 349 349 ILE ILE B . n B 1 271 LYS 271 350 350 LYS LYS B . n B 1 272 LEU 272 351 351 LEU LEU B . n B 1 273 VAL 273 352 352 VAL VAL B . n B 1 274 LYS 274 353 353 LYS LYS B . n B 1 275 MET 275 354 354 MET MET B . n B 1 276 SER 276 355 355 SER SER B . n B 1 277 TRP 277 356 356 TRP TRP B . n B 1 278 GLN 278 357 357 GLN GLN B . n B 1 279 THR 279 358 358 THR THR B . n B 1 280 LYS 280 359 359 LYS LYS B . n B 1 281 GLU 281 360 360 GLU GLU B . n B 1 282 TYR 282 361 361 TYR TYR B . n B 1 283 ASN 283 362 362 ASN ASN B . n B 1 284 VAL 284 363 363 VAL VAL B . n B 1 285 VAL 285 364 364 VAL VAL B . n B 1 286 ARG 286 365 365 ARG ARG B . n B 1 287 ASN 287 366 366 ASN ASN B . n B 1 288 ASN 288 367 367 ASN ASN B . n B 1 289 VAL 289 368 368 VAL VAL B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 UDP 1 401 1369 UDP UDP A . F 4 MN 1 403 1371 MN MN A . G 3 UDP 1 401 1369 UDP UDP B . H 4 MN 1 403 1371 MN MN B . I 5 HOH 1 501 106 HOH HOH A . I 5 HOH 2 502 228 HOH HOH A . I 5 HOH 3 503 69 HOH HOH A . I 5 HOH 4 504 416 HOH HOH A . I 5 HOH 5 505 127 HOH HOH A . I 5 HOH 6 506 232 HOH HOH A . I 5 HOH 7 507 412 HOH HOH A . I 5 HOH 8 508 201 HOH HOH A . I 5 HOH 9 509 51 HOH HOH A . I 5 HOH 10 510 145 HOH HOH A . I 5 HOH 11 511 246 HOH HOH A . I 5 HOH 12 512 131 HOH HOH A . I 5 HOH 13 513 231 HOH HOH A . I 5 HOH 14 514 259 HOH HOH A . I 5 HOH 15 515 158 HOH HOH A . I 5 HOH 16 516 207 HOH HOH A . I 5 HOH 17 517 362 HOH HOH A . I 5 HOH 18 518 370 HOH HOH A . I 5 HOH 19 519 37 HOH HOH A . I 5 HOH 20 520 423 HOH HOH A . I 5 HOH 21 521 255 HOH HOH A . I 5 HOH 22 522 92 HOH HOH A . I 5 HOH 23 523 316 HOH HOH A . I 5 HOH 24 524 258 HOH HOH A . I 5 HOH 25 525 267 HOH HOH A . I 5 HOH 26 526 35 HOH HOH A . I 5 HOH 27 527 356 HOH HOH A . I 5 HOH 28 528 21 HOH HOH A . I 5 HOH 29 529 257 HOH HOH A . I 5 HOH 30 530 54 HOH HOH A . I 5 HOH 31 531 104 HOH HOH A . I 5 HOH 32 532 57 HOH HOH A . I 5 HOH 33 533 178 HOH HOH A . I 5 HOH 34 534 60 HOH HOH A . I 5 HOH 35 535 105 HOH HOH A . I 5 HOH 36 536 181 HOH HOH A . I 5 HOH 37 537 365 HOH HOH A . I 5 HOH 38 538 252 HOH HOH A . I 5 HOH 39 539 260 HOH HOH A . I 5 HOH 40 540 261 HOH HOH A . I 5 HOH 41 541 240 HOH HOH A . I 5 HOH 42 542 81 HOH HOH A . I 5 HOH 43 543 77 HOH HOH A . I 5 HOH 44 544 398 HOH HOH A . I 5 HOH 45 545 179 HOH HOH A . I 5 HOH 46 546 118 HOH HOH A . I 5 HOH 47 547 363 HOH HOH A . I 5 HOH 48 548 149 HOH HOH A . I 5 HOH 49 549 22 HOH HOH A . I 5 HOH 50 550 321 HOH HOH A . I 5 HOH 51 551 187 HOH HOH A . I 5 HOH 52 552 32 HOH HOH A . I 5 HOH 53 553 13 HOH HOH A . I 5 HOH 54 554 278 HOH HOH A . I 5 HOH 55 555 130 HOH HOH A . I 5 HOH 56 556 27 HOH HOH A . I 5 HOH 57 557 424 HOH HOH A . I 5 HOH 58 558 80 HOH HOH A . I 5 HOH 59 559 125 HOH HOH A . I 5 HOH 60 560 359 HOH HOH A . I 5 HOH 61 561 90 HOH HOH A . I 5 HOH 62 562 128 HOH HOH A . I 5 HOH 63 563 151 HOH HOH A . I 5 HOH 64 564 409 HOH HOH A . I 5 HOH 65 565 315 HOH HOH A . I 5 HOH 66 566 373 HOH HOH A . I 5 HOH 67 567 227 HOH HOH A . I 5 HOH 68 568 14 HOH HOH A . I 5 HOH 69 569 243 HOH HOH A . I 5 HOH 70 570 172 HOH HOH A . I 5 HOH 71 571 286 HOH HOH A . I 5 HOH 72 572 213 HOH HOH A . I 5 HOH 73 573 189 HOH HOH A . I 5 HOH 74 574 245 HOH HOH A . I 5 HOH 75 575 16 HOH HOH A . I 5 HOH 76 576 63 HOH HOH A . I 5 HOH 77 577 237 HOH HOH A . I 5 HOH 78 578 50 HOH HOH A . I 5 HOH 79 579 53 HOH HOH A . I 5 HOH 80 580 70 HOH HOH A . I 5 HOH 81 581 250 HOH HOH A . I 5 HOH 82 582 11 HOH HOH A . I 5 HOH 83 583 107 HOH HOH A . I 5 HOH 84 584 364 HOH HOH A . I 5 HOH 85 585 132 HOH HOH A . I 5 HOH 86 586 110 HOH HOH A . I 5 HOH 87 587 25 HOH HOH A . I 5 HOH 88 588 49 HOH HOH A . I 5 HOH 89 589 352 HOH HOH A . I 5 HOH 90 590 205 HOH HOH A . I 5 HOH 91 591 425 HOH HOH A . I 5 HOH 92 592 283 HOH HOH A . I 5 HOH 93 593 293 HOH HOH A . I 5 HOH 94 594 157 HOH HOH A . I 5 HOH 95 595 5 HOH HOH A . I 5 HOH 96 596 360 HOH HOH A . I 5 HOH 97 597 18 HOH HOH A . I 5 HOH 98 598 262 HOH HOH A . I 5 HOH 99 599 357 HOH HOH A . I 5 HOH 100 600 300 HOH HOH A . I 5 HOH 101 601 353 HOH HOH A . I 5 HOH 102 602 58 HOH HOH A . I 5 HOH 103 603 71 HOH HOH A . I 5 HOH 104 604 176 HOH HOH A . I 5 HOH 105 605 121 HOH HOH A . I 5 HOH 106 606 313 HOH HOH A . I 5 HOH 107 607 41 HOH HOH A . I 5 HOH 108 608 9 HOH HOH A . I 5 HOH 109 609 72 HOH HOH A . I 5 HOH 110 610 322 HOH HOH A . I 5 HOH 111 611 17 HOH HOH A . I 5 HOH 112 612 411 HOH HOH A . I 5 HOH 113 613 419 HOH HOH A . I 5 HOH 114 614 55 HOH HOH A . I 5 HOH 115 615 67 HOH HOH A . I 5 HOH 116 616 266 HOH HOH A . I 5 HOH 117 617 120 HOH HOH A . I 5 HOH 118 618 159 HOH HOH A . I 5 HOH 119 619 203 HOH HOH A . I 5 HOH 120 620 421 HOH HOH A . I 5 HOH 121 621 184 HOH HOH A . I 5 HOH 122 622 87 HOH HOH A . I 5 HOH 123 623 156 HOH HOH A . I 5 HOH 124 624 83 HOH HOH A . I 5 HOH 125 625 93 HOH HOH A . I 5 HOH 126 626 133 HOH HOH A . I 5 HOH 127 627 100 HOH HOH A . I 5 HOH 128 628 415 HOH HOH A . I 5 HOH 129 629 141 HOH HOH A . I 5 HOH 130 630 318 HOH HOH A . I 5 HOH 131 631 117 HOH HOH A . I 5 HOH 132 632 137 HOH HOH A . I 5 HOH 133 633 299 HOH HOH A . I 5 HOH 134 634 355 HOH HOH A . I 5 HOH 135 635 99 HOH HOH A . I 5 HOH 136 636 97 HOH HOH A . I 5 HOH 137 637 39 HOH HOH A . I 5 HOH 138 638 418 HOH HOH A . I 5 HOH 139 639 171 HOH HOH A . I 5 HOH 140 640 212 HOH HOH A . I 5 HOH 141 641 177 HOH HOH A . I 5 HOH 142 642 199 HOH HOH A . I 5 HOH 143 643 317 HOH HOH A . I 5 HOH 144 644 367 HOH HOH A . I 5 HOH 145 645 183 HOH HOH A . I 5 HOH 146 646 301 HOH HOH A . I 5 HOH 147 647 217 HOH HOH A . I 5 HOH 148 648 170 HOH HOH A . I 5 HOH 149 649 254 HOH HOH A . I 5 HOH 150 650 413 HOH HOH A . I 5 HOH 151 651 215 HOH HOH A . I 5 HOH 152 652 75 HOH HOH A . I 5 HOH 153 653 263 HOH HOH A . I 5 HOH 154 654 361 HOH HOH A . I 5 HOH 155 655 226 HOH HOH A . I 5 HOH 156 656 211 HOH HOH A . I 5 HOH 157 657 209 HOH HOH A . I 5 HOH 158 658 319 HOH HOH A . I 5 HOH 159 659 230 HOH HOH A . I 5 HOH 160 660 320 HOH HOH A . I 5 HOH 161 661 224 HOH HOH A . I 5 HOH 162 662 426 HOH HOH A . I 5 HOH 163 663 167 HOH HOH A . I 5 HOH 164 664 251 HOH HOH A . I 5 HOH 165 665 140 HOH HOH A . I 5 HOH 166 666 190 HOH HOH A . I 5 HOH 167 667 82 HOH HOH A . I 5 HOH 168 668 295 HOH HOH A . I 5 HOH 169 669 36 HOH HOH A . I 5 HOH 170 670 180 HOH HOH A . I 5 HOH 171 671 142 HOH HOH A . I 5 HOH 172 672 366 HOH HOH A . I 5 HOH 173 673 239 HOH HOH A . I 5 HOH 174 674 101 HOH HOH A . I 5 HOH 175 675 126 HOH HOH A . I 5 HOH 176 676 264 HOH HOH A . I 5 HOH 177 677 368 HOH HOH A . I 5 HOH 178 678 303 HOH HOH A . I 5 HOH 179 679 94 HOH HOH A . I 5 HOH 180 680 369 HOH HOH A . I 5 HOH 181 681 371 HOH HOH A . I 5 HOH 182 682 249 HOH HOH A . I 5 HOH 183 683 165 HOH HOH A . I 5 HOH 184 684 241 HOH HOH A . I 5 HOH 185 685 265 HOH HOH A . I 5 HOH 186 686 269 HOH HOH A . I 5 HOH 187 687 294 HOH HOH A . I 5 HOH 188 688 48 HOH HOH A . I 5 HOH 189 689 193 HOH HOH A . I 5 HOH 190 690 358 HOH HOH A . I 5 HOH 191 691 354 HOH HOH A . I 5 HOH 192 692 248 HOH HOH A . I 5 HOH 193 693 160 HOH HOH A . I 5 HOH 194 694 422 HOH HOH A . I 5 HOH 195 695 292 HOH HOH A . I 5 HOH 196 696 420 HOH HOH A . I 5 HOH 197 697 268 HOH HOH A . I 5 HOH 198 698 298 HOH HOH A . I 5 HOH 199 699 208 HOH HOH A . I 5 HOH 200 700 238 HOH HOH A . I 5 HOH 201 701 399 HOH HOH A . I 5 HOH 202 702 123 HOH HOH A . I 5 HOH 203 703 115 HOH HOH A . I 5 HOH 204 704 214 HOH HOH A . I 5 HOH 205 705 219 HOH HOH A . I 5 HOH 206 706 78 HOH HOH A . I 5 HOH 207 707 374 HOH HOH A . I 5 HOH 208 708 302 HOH HOH A . I 5 HOH 209 709 314 HOH HOH A . I 5 HOH 210 710 46 HOH HOH A . I 5 HOH 211 711 312 HOH HOH A . I 5 HOH 212 712 223 HOH HOH A . I 5 HOH 213 713 372 HOH HOH A . I 5 HOH 214 714 191 HOH HOH A . I 5 HOH 215 715 414 HOH HOH A . I 5 HOH 216 716 410 HOH HOH A . I 5 HOH 217 717 253 HOH HOH A . I 5 HOH 218 718 296 HOH HOH A . I 5 HOH 219 719 275 HOH HOH A . I 5 HOH 220 720 84 HOH HOH A . I 5 HOH 221 721 297 HOH HOH A . J 5 HOH 1 501 185 HOH HOH B . J 5 HOH 2 502 221 HOH HOH B . J 5 HOH 3 503 24 HOH HOH B . J 5 HOH 4 504 113 HOH HOH B . J 5 HOH 5 505 119 HOH HOH B . J 5 HOH 6 506 29 HOH HOH B . J 5 HOH 7 507 206 HOH HOH B . J 5 HOH 8 508 327 HOH HOH B . J 5 HOH 9 509 112 HOH HOH B . J 5 HOH 10 510 124 HOH HOH B . J 5 HOH 11 511 164 HOH HOH B . J 5 HOH 12 512 153 HOH HOH B . J 5 HOH 13 513 38 HOH HOH B . J 5 HOH 14 514 309 HOH HOH B . J 5 HOH 15 515 85 HOH HOH B . J 5 HOH 16 516 417 HOH HOH B . J 5 HOH 17 517 344 HOH HOH B . J 5 HOH 18 518 2 HOH HOH B . J 5 HOH 19 519 343 HOH HOH B . J 5 HOH 20 520 282 HOH HOH B . J 5 HOH 21 521 380 HOH HOH B . J 5 HOH 22 522 15 HOH HOH B . J 5 HOH 23 523 192 HOH HOH B . J 5 HOH 24 524 234 HOH HOH B . J 5 HOH 25 525 332 HOH HOH B . J 5 HOH 26 526 391 HOH HOH B . J 5 HOH 27 527 74 HOH HOH B . J 5 HOH 28 528 144 HOH HOH B . J 5 HOH 29 529 6 HOH HOH B . J 5 HOH 30 530 350 HOH HOH B . J 5 HOH 31 531 166 HOH HOH B . J 5 HOH 32 532 139 HOH HOH B . J 5 HOH 33 533 76 HOH HOH B . J 5 HOH 34 534 154 HOH HOH B . J 5 HOH 35 535 306 HOH HOH B . J 5 HOH 36 536 42 HOH HOH B . J 5 HOH 37 537 146 HOH HOH B . J 5 HOH 38 538 64 HOH HOH B . J 5 HOH 39 539 143 HOH HOH B . J 5 HOH 40 540 8 HOH HOH B . J 5 HOH 41 541 134 HOH HOH B . J 5 HOH 42 542 111 HOH HOH B . J 5 HOH 43 543 23 HOH HOH B . J 5 HOH 44 544 34 HOH HOH B . J 5 HOH 45 545 135 HOH HOH B . J 5 HOH 46 546 284 HOH HOH B . J 5 HOH 47 547 218 HOH HOH B . J 5 HOH 48 548 378 HOH HOH B . J 5 HOH 49 549 103 HOH HOH B . J 5 HOH 50 550 19 HOH HOH B . J 5 HOH 51 551 186 HOH HOH B . J 5 HOH 52 552 7 HOH HOH B . J 5 HOH 53 553 273 HOH HOH B . J 5 HOH 54 554 108 HOH HOH B . J 5 HOH 55 555 236 HOH HOH B . J 5 HOH 56 556 247 HOH HOH B . J 5 HOH 57 557 279 HOH HOH B . J 5 HOH 58 558 197 HOH HOH B . J 5 HOH 59 559 10 HOH HOH B . J 5 HOH 60 560 188 HOH HOH B . J 5 HOH 61 561 44 HOH HOH B . J 5 HOH 62 562 89 HOH HOH B . J 5 HOH 63 563 88 HOH HOH B . J 5 HOH 64 564 12 HOH HOH B . J 5 HOH 65 565 45 HOH HOH B . J 5 HOH 66 566 330 HOH HOH B . J 5 HOH 67 567 56 HOH HOH B . J 5 HOH 68 568 382 HOH HOH B . J 5 HOH 69 569 40 HOH HOH B . J 5 HOH 70 570 339 HOH HOH B . J 5 HOH 71 571 274 HOH HOH B . J 5 HOH 72 572 136 HOH HOH B . J 5 HOH 73 573 30 HOH HOH B . J 5 HOH 74 574 402 HOH HOH B . J 5 HOH 75 575 324 HOH HOH B . J 5 HOH 76 576 400 HOH HOH B . J 5 HOH 77 577 79 HOH HOH B . J 5 HOH 78 578 122 HOH HOH B . J 5 HOH 79 579 31 HOH HOH B . J 5 HOH 80 580 385 HOH HOH B . J 5 HOH 81 581 4 HOH HOH B . J 5 HOH 82 582 390 HOH HOH B . J 5 HOH 83 583 225 HOH HOH B . J 5 HOH 84 584 198 HOH HOH B . J 5 HOH 85 585 304 HOH HOH B . J 5 HOH 86 586 20 HOH HOH B . J 5 HOH 87 587 334 HOH HOH B . J 5 HOH 88 588 333 HOH HOH B . J 5 HOH 89 589 375 HOH HOH B . J 5 HOH 90 590 59 HOH HOH B . J 5 HOH 91 591 340 HOH HOH B . J 5 HOH 92 592 351 HOH HOH B . J 5 HOH 93 593 3 HOH HOH B . J 5 HOH 94 594 210 HOH HOH B . J 5 HOH 95 595 1 HOH HOH B . J 5 HOH 96 596 102 HOH HOH B . J 5 HOH 97 597 287 HOH HOH B . J 5 HOH 98 598 161 HOH HOH B . J 5 HOH 99 599 129 HOH HOH B . J 5 HOH 100 600 290 HOH HOH B . J 5 HOH 101 601 196 HOH HOH B . J 5 HOH 102 602 116 HOH HOH B . J 5 HOH 103 603 288 HOH HOH B . J 5 HOH 104 604 138 HOH HOH B . J 5 HOH 105 605 47 HOH HOH B . J 5 HOH 106 606 65 HOH HOH B . J 5 HOH 107 607 347 HOH HOH B . J 5 HOH 108 608 389 HOH HOH B . J 5 HOH 109 609 216 HOH HOH B . J 5 HOH 110 610 68 HOH HOH B . J 5 HOH 111 611 173 HOH HOH B . J 5 HOH 112 612 195 HOH HOH B . J 5 HOH 113 613 233 HOH HOH B . J 5 HOH 114 614 169 HOH HOH B . J 5 HOH 115 615 175 HOH HOH B . J 5 HOH 116 616 377 HOH HOH B . J 5 HOH 117 617 148 HOH HOH B . J 5 HOH 118 618 271 HOH HOH B . J 5 HOH 119 619 276 HOH HOH B . J 5 HOH 120 620 61 HOH HOH B . J 5 HOH 121 621 86 HOH HOH B . J 5 HOH 122 622 52 HOH HOH B . J 5 HOH 123 623 150 HOH HOH B . J 5 HOH 124 624 335 HOH HOH B . J 5 HOH 125 625 202 HOH HOH B . J 5 HOH 126 626 114 HOH HOH B . J 5 HOH 127 627 384 HOH HOH B . J 5 HOH 128 628 395 HOH HOH B . J 5 HOH 129 629 328 HOH HOH B . J 5 HOH 130 630 310 HOH HOH B . J 5 HOH 131 631 393 HOH HOH B . J 5 HOH 132 632 174 HOH HOH B . J 5 HOH 133 633 66 HOH HOH B . J 5 HOH 134 634 408 HOH HOH B . J 5 HOH 135 635 147 HOH HOH B . J 5 HOH 136 636 379 HOH HOH B . J 5 HOH 137 637 109 HOH HOH B . J 5 HOH 138 638 194 HOH HOH B . J 5 HOH 139 639 168 HOH HOH B . J 5 HOH 140 640 338 HOH HOH B . J 5 HOH 141 641 229 HOH HOH B . J 5 HOH 142 642 383 HOH HOH B . J 5 HOH 143 643 405 HOH HOH B . J 5 HOH 144 644 204 HOH HOH B . J 5 HOH 145 645 26 HOH HOH B . J 5 HOH 146 646 387 HOH HOH B . J 5 HOH 147 647 155 HOH HOH B . J 5 HOH 148 648 346 HOH HOH B . J 5 HOH 149 649 396 HOH HOH B . J 5 HOH 150 650 33 HOH HOH B . J 5 HOH 151 651 388 HOH HOH B . J 5 HOH 152 652 392 HOH HOH B . J 5 HOH 153 653 73 HOH HOH B . J 5 HOH 154 654 337 HOH HOH B . J 5 HOH 155 655 235 HOH HOH B . J 5 HOH 156 656 348 HOH HOH B . J 5 HOH 157 657 404 HOH HOH B . J 5 HOH 158 658 311 HOH HOH B . J 5 HOH 159 659 323 HOH HOH B . J 5 HOH 160 660 91 HOH HOH B . J 5 HOH 161 661 285 HOH HOH B . J 5 HOH 162 662 403 HOH HOH B . J 5 HOH 163 663 281 HOH HOH B . J 5 HOH 164 664 162 HOH HOH B . J 5 HOH 165 665 289 HOH HOH B . J 5 HOH 166 666 220 HOH HOH B . J 5 HOH 167 667 381 HOH HOH B . J 5 HOH 168 668 95 HOH HOH B . J 5 HOH 169 669 342 HOH HOH B . J 5 HOH 170 670 406 HOH HOH B . J 5 HOH 171 671 331 HOH HOH B . J 5 HOH 172 672 341 HOH HOH B . J 5 HOH 173 673 222 HOH HOH B . J 5 HOH 174 674 349 HOH HOH B . J 5 HOH 175 675 200 HOH HOH B . J 5 HOH 176 676 280 HOH HOH B . J 5 HOH 177 677 307 HOH HOH B . J 5 HOH 178 678 62 HOH HOH B . J 5 HOH 179 679 305 HOH HOH B . J 5 HOH 180 680 407 HOH HOH B . J 5 HOH 181 681 336 HOH HOH B . J 5 HOH 182 682 291 HOH HOH B . J 5 HOH 183 683 163 HOH HOH B . J 5 HOH 184 684 182 HOH HOH B . J 5 HOH 185 685 308 HOH HOH B . J 5 HOH 186 686 270 HOH HOH B . J 5 HOH 187 687 397 HOH HOH B . J 5 HOH 188 688 376 HOH HOH B . J 5 HOH 189 689 96 HOH HOH B . J 5 HOH 190 690 345 HOH HOH B . J 5 HOH 191 691 277 HOH HOH B . J 5 HOH 192 692 242 HOH HOH B . J 5 HOH 193 693 401 HOH HOH B . J 5 HOH 194 694 329 HOH HOH B . J 5 HOH 195 695 394 HOH HOH B . J 5 HOH 196 696 386 HOH HOH B . J 5 HOH 197 697 272 HOH HOH B . J 5 HOH 198 698 28 HOH HOH B . J 5 HOH 199 699 326 HOH HOH B . J 5 HOH 200 700 98 HOH HOH B . J 5 HOH 201 701 43 HOH HOH B . J 5 HOH 202 702 256 HOH HOH B . J 5 HOH 203 703 325 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900019 _pdbx_molecule_features.name N-acetyl-alpha-lactosamine _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Glycan component' _pdbx_molecule_features.details oligosaccharide # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900019 C 2 PRD_900019 D # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1980 ? 1 MORE -11.6 ? 1 'SSA (A^2)' 29630 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 146 ? A ASP 225 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 OD1 ? A ASP 148 ? A ASP 227 ? 1_555 105.1 ? 2 OD2 ? A ASP 146 ? A ASP 225 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 OD2 ? A ASP 148 ? A ASP 227 ? 1_555 156.4 ? 3 OD1 ? A ASP 148 ? A ASP 227 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 OD2 ? A ASP 148 ? A ASP 227 ? 1_555 52.7 ? 4 OD2 ? A ASP 146 ? A ASP 225 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O1A ? E UDP . ? A UDP 401 ? 1_555 96.6 ? 5 OD1 ? A ASP 148 ? A ASP 227 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O1A ? E UDP . ? A UDP 401 ? 1_555 83.5 ? 6 OD2 ? A ASP 148 ? A ASP 227 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O1A ? E UDP . ? A UDP 401 ? 1_555 75.0 ? 7 OD2 ? A ASP 146 ? A ASP 225 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O1B ? E UDP . ? A UDP 401 ? 1_555 95.4 ? 8 OD1 ? A ASP 148 ? A ASP 227 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O1B ? E UDP . ? A UDP 401 ? 1_555 157.4 ? 9 OD2 ? A ASP 148 ? A ASP 227 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O1B ? E UDP . ? A UDP 401 ? 1_555 105.5 ? 10 O1A ? E UDP . ? A UDP 401 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O1B ? E UDP . ? A UDP 401 ? 1_555 84.7 ? 11 OD2 ? A ASP 146 ? A ASP 225 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 648 ? 1_555 100.5 ? 12 OD1 ? A ASP 148 ? A ASP 227 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 648 ? 1_555 101.4 ? 13 OD2 ? A ASP 148 ? A ASP 227 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 648 ? 1_555 92.6 ? 14 O1A ? E UDP . ? A UDP 401 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 648 ? 1_555 160.2 ? 15 O1B ? E UDP . ? A UDP 401 ? 1_555 MN ? F MN . ? A MN 403 ? 1_555 O ? I HOH . ? A HOH 648 ? 1_555 83.7 ? 16 OD2 ? B ASP 146 ? B ASP 225 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 OD1 ? B ASP 148 ? B ASP 227 ? 1_555 104.7 ? 17 OD2 ? B ASP 146 ? B ASP 225 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 OD2 ? B ASP 148 ? B ASP 227 ? 1_555 155.6 ? 18 OD1 ? B ASP 148 ? B ASP 227 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 OD2 ? B ASP 148 ? B ASP 227 ? 1_555 51.4 ? 19 OD2 ? B ASP 146 ? B ASP 225 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O1A ? G UDP . ? B UDP 401 ? 1_555 102.7 ? 20 OD1 ? B ASP 148 ? B ASP 227 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O1A ? G UDP . ? B UDP 401 ? 1_555 80.7 ? 21 OD2 ? B ASP 148 ? B ASP 227 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O1A ? G UDP . ? B UDP 401 ? 1_555 80.1 ? 22 OD2 ? B ASP 146 ? B ASP 225 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O1B ? G UDP . ? B UDP 401 ? 1_555 94.5 ? 23 OD1 ? B ASP 148 ? B ASP 227 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O1B ? G UDP . ? B UDP 401 ? 1_555 160.0 ? 24 OD2 ? B ASP 148 ? B ASP 227 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O1B ? G UDP . ? B UDP 401 ? 1_555 109.8 ? 25 O1A ? G UDP . ? B UDP 401 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O1B ? G UDP . ? B UDP 401 ? 1_555 89.7 ? 26 OD2 ? B ASP 146 ? B ASP 225 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O ? J HOH . ? B HOH 615 ? 1_555 94.2 ? 27 OD1 ? B ASP 148 ? B ASP 227 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O ? J HOH . ? B HOH 615 ? 1_555 104.4 ? 28 OD2 ? B ASP 148 ? B ASP 227 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O ? J HOH . ? B HOH 615 ? 1_555 88.6 ? 29 O1A ? G UDP . ? B UDP 401 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O ? J HOH . ? B HOH 615 ? 1_555 160.6 ? 30 O1B ? G UDP . ? B UDP 401 ? 1_555 MN ? H MN . ? B MN 403 ? 1_555 O ? J HOH . ? B HOH 615 ? 1_555 79.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-15 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-07-12 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2023-12-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Non-polymer description' 10 5 'Structure model' Other 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Database references' 14 6 'Structure model' 'Refinement description' 15 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_PDB_caveat 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 5 'Structure model' atom_site 5 5 'Structure model' chem_comp 6 5 'Structure model' database_PDB_caveat 7 5 'Structure model' entity 8 5 'Structure model' entity_name_com 9 5 'Structure model' pdbx_branch_scheme 10 5 'Structure model' pdbx_chem_comp_identifier 11 5 'Structure model' pdbx_database_status 12 5 'Structure model' pdbx_entity_branch 13 5 'Structure model' pdbx_entity_branch_descriptor 14 5 'Structure model' pdbx_entity_branch_link 15 5 'Structure model' pdbx_entity_branch_list 16 5 'Structure model' pdbx_entity_nonpoly 17 5 'Structure model' pdbx_molecule_features 18 5 'Structure model' pdbx_nonpoly_scheme 19 5 'Structure model' pdbx_struct_conn_angle 20 5 'Structure model' pdbx_validate_chiral 21 5 'Structure model' struct_asym 22 5 'Structure model' struct_conn 23 5 'Structure model' struct_conn_type 24 5 'Structure model' struct_site 25 5 'Structure model' struct_site_gen 26 6 'Structure model' chem_comp 27 6 'Structure model' chem_comp_atom 28 6 'Structure model' chem_comp_bond 29 6 'Structure model' database_2 30 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_atom_site.B_iso_or_equiv' 2 5 'Structure model' '_atom_site.Cartn_x' 3 5 'Structure model' '_atom_site.Cartn_y' 4 5 'Structure model' '_atom_site.Cartn_z' 5 5 'Structure model' '_atom_site.auth_asym_id' 6 5 'Structure model' '_atom_site.auth_atom_id' 7 5 'Structure model' '_atom_site.auth_comp_id' 8 5 'Structure model' '_atom_site.auth_seq_id' 9 5 'Structure model' '_atom_site.label_asym_id' 10 5 'Structure model' '_atom_site.label_atom_id' 11 5 'Structure model' '_atom_site.label_comp_id' 12 5 'Structure model' '_atom_site.label_entity_id' 13 5 'Structure model' '_atom_site.type_symbol' 14 5 'Structure model' '_chem_comp.formula' 15 5 'Structure model' '_chem_comp.formula_weight' 16 5 'Structure model' '_chem_comp.id' 17 5 'Structure model' '_chem_comp.mon_nstd_flag' 18 5 'Structure model' '_chem_comp.name' 19 5 'Structure model' '_chem_comp.type' 20 5 'Structure model' '_database_PDB_caveat.text' 21 5 'Structure model' '_entity.formula_weight' 22 5 'Structure model' '_entity.pdbx_description' 23 5 'Structure model' '_entity.src_method' 24 5 'Structure model' '_entity.type' 25 5 'Structure model' '_pdbx_database_status.status_code_sf' 26 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 27 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 28 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 29 5 'Structure model' '_pdbx_validate_chiral.auth_asym_id' 30 5 'Structure model' '_pdbx_validate_chiral.auth_comp_id' 31 5 'Structure model' '_pdbx_validate_chiral.auth_seq_id' 32 5 'Structure model' '_struct_asym.entity_id' 33 6 'Structure model' '_chem_comp.pdbx_synonyms' 34 6 'Structure model' '_database_2.pdbx_DOI' 35 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.2 ? 1 HKL-2000 'data reduction' . ? 2 HKL-2000 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2VS3 _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, ASP 316 TO ASN ENGINEERED RESIDUE IN CHAIN B, ASP 316 TO ASN ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 213 ? ? -148.84 -36.98 2 1 THR A 259 ? ? -76.72 46.22 3 1 HIS A 315 ? ? 58.72 -118.71 4 1 CYS A 338 ? ? -161.95 84.19 5 1 HIS B 213 ? ? -146.73 -38.92 6 1 HIS B 315 ? ? 56.35 -121.36 7 1 CYS B 338 ? ? -164.50 81.11 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? C NDG 1 ? 'WRONG HAND' . 2 1 C1 ? D NDG 1 ? 'WRONG HAND' . # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 703 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.00 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 80 ? A GLU 1 2 1 Y 1 A SER 81 ? A SER 2 3 1 Y 1 B GLU 80 ? B GLU 1 4 1 Y 1 B SER 81 ? B SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GAL C1 C N R 88 GAL C2 C N R 89 GAL C3 C N S 90 GAL C4 C N R 91 GAL C5 C N R 92 GAL C6 C N N 93 GAL O1 O N N 94 GAL O2 O N N 95 GAL O3 O N N 96 GAL O4 O N N 97 GAL O5 O N N 98 GAL O6 O N N 99 GAL H1 H N N 100 GAL H2 H N N 101 GAL H3 H N N 102 GAL H4 H N N 103 GAL H5 H N N 104 GAL H61 H N N 105 GAL H62 H N N 106 GAL HO1 H N N 107 GAL HO2 H N N 108 GAL HO3 H N N 109 GAL HO4 H N N 110 GAL HO6 H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 MN MN MN N N 274 NDG C1 C N S 275 NDG C2 C N R 276 NDG C3 C N R 277 NDG C4 C N S 278 NDG C5 C N R 279 NDG C6 C N N 280 NDG C7 C N N 281 NDG C8 C N N 282 NDG O5 O N N 283 NDG O3 O N N 284 NDG O4 O N N 285 NDG O6 O N N 286 NDG O7 O N N 287 NDG N2 N N N 288 NDG O1 O N N 289 NDG H1 H N N 290 NDG H2 H N N 291 NDG H3 H N N 292 NDG H4 H N N 293 NDG H5 H N N 294 NDG H61 H N N 295 NDG H62 H N N 296 NDG H81 H N N 297 NDG H82 H N N 298 NDG H83 H N N 299 NDG HO3 H N N 300 NDG HO4 H N N 301 NDG HO6 H N N 302 NDG HN2 H N N 303 NDG HO1 H N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TRP N N N N 376 TRP CA C N S 377 TRP C C N N 378 TRP O O N N 379 TRP CB C N N 380 TRP CG C Y N 381 TRP CD1 C Y N 382 TRP CD2 C Y N 383 TRP NE1 N Y N 384 TRP CE2 C Y N 385 TRP CE3 C Y N 386 TRP CZ2 C Y N 387 TRP CZ3 C Y N 388 TRP CH2 C Y N 389 TRP OXT O N N 390 TRP H H N N 391 TRP H2 H N N 392 TRP HA H N N 393 TRP HB2 H N N 394 TRP HB3 H N N 395 TRP HD1 H N N 396 TRP HE1 H N N 397 TRP HE3 H N N 398 TRP HZ2 H N N 399 TRP HZ3 H N N 400 TRP HH2 H N N 401 TRP HXT H N N 402 TYR N N N N 403 TYR CA C N S 404 TYR C C N N 405 TYR O O N N 406 TYR CB C N N 407 TYR CG C Y N 408 TYR CD1 C Y N 409 TYR CD2 C Y N 410 TYR CE1 C Y N 411 TYR CE2 C Y N 412 TYR CZ C Y N 413 TYR OH O N N 414 TYR OXT O N N 415 TYR H H N N 416 TYR H2 H N N 417 TYR HA H N N 418 TYR HB2 H N N 419 TYR HB3 H N N 420 TYR HD1 H N N 421 TYR HD2 H N N 422 TYR HE1 H N N 423 TYR HE2 H N N 424 TYR HH H N N 425 TYR HXT H N N 426 UDP N1 N N N 427 UDP C2 C N N 428 UDP N3 N N N 429 UDP C4 C N N 430 UDP C5 C N N 431 UDP C6 C N N 432 UDP O2 O N N 433 UDP O4 O N N 434 UDP "C1'" C N R 435 UDP "C2'" C N R 436 UDP "O2'" O N N 437 UDP "C3'" C N S 438 UDP "C4'" C N R 439 UDP "O4'" O N N 440 UDP "O3'" O N N 441 UDP "C5'" C N N 442 UDP "O5'" O N N 443 UDP PA P N N 444 UDP O1A O N N 445 UDP O2A O N N 446 UDP O3A O N N 447 UDP PB P N N 448 UDP O1B O N N 449 UDP O2B O N N 450 UDP O3B O N N 451 UDP HN3 H N N 452 UDP H5 H N N 453 UDP H6 H N N 454 UDP "H1'" H N N 455 UDP "H2'" H N N 456 UDP "HO2'" H N N 457 UDP "H3'" H N N 458 UDP "H4'" H N N 459 UDP "HO3'" H N N 460 UDP "H5'1" H N N 461 UDP "H5'2" H N N 462 UDP HOA2 H N N 463 UDP HOB2 H N N 464 UDP HOB3 H N N 465 VAL N N N N 466 VAL CA C N S 467 VAL C C N N 468 VAL O O N N 469 VAL CB C N N 470 VAL CG1 C N N 471 VAL CG2 C N N 472 VAL OXT O N N 473 VAL H H N N 474 VAL H2 H N N 475 VAL HA H N N 476 VAL HB H N N 477 VAL HG11 H N N 478 VAL HG12 H N N 479 VAL HG13 H N N 480 VAL HG21 H N N 481 VAL HG22 H N N 482 VAL HG23 H N N 483 VAL HXT H N N 484 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GAL C1 C2 sing N N 83 GAL C1 O1 sing N N 84 GAL C1 O5 sing N N 85 GAL C1 H1 sing N N 86 GAL C2 C3 sing N N 87 GAL C2 O2 sing N N 88 GAL C2 H2 sing N N 89 GAL C3 C4 sing N N 90 GAL C3 O3 sing N N 91 GAL C3 H3 sing N N 92 GAL C4 C5 sing N N 93 GAL C4 O4 sing N N 94 GAL C4 H4 sing N N 95 GAL C5 C6 sing N N 96 GAL C5 O5 sing N N 97 GAL C5 H5 sing N N 98 GAL C6 O6 sing N N 99 GAL C6 H61 sing N N 100 GAL C6 H62 sing N N 101 GAL O1 HO1 sing N N 102 GAL O2 HO2 sing N N 103 GAL O3 HO3 sing N N 104 GAL O4 HO4 sing N N 105 GAL O6 HO6 sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 NDG C1 C2 sing N N 261 NDG C1 O5 sing N N 262 NDG C1 O1 sing N N 263 NDG C1 H1 sing N N 264 NDG C2 C3 sing N N 265 NDG C2 N2 sing N N 266 NDG C2 H2 sing N N 267 NDG C3 C4 sing N N 268 NDG C3 O3 sing N N 269 NDG C3 H3 sing N N 270 NDG C4 C5 sing N N 271 NDG C4 O4 sing N N 272 NDG C4 H4 sing N N 273 NDG C5 C6 sing N N 274 NDG C5 O5 sing N N 275 NDG C5 H5 sing N N 276 NDG C6 O6 sing N N 277 NDG C6 H61 sing N N 278 NDG C6 H62 sing N N 279 NDG C7 C8 sing N N 280 NDG C7 O7 doub N N 281 NDG C7 N2 sing N N 282 NDG C8 H81 sing N N 283 NDG C8 H82 sing N N 284 NDG C8 H83 sing N N 285 NDG O3 HO3 sing N N 286 NDG O4 HO4 sing N N 287 NDG O6 HO6 sing N N 288 NDG N2 HN2 sing N N 289 NDG O1 HO1 sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 UDP N1 C2 sing N N 412 UDP N1 C6 sing N N 413 UDP N1 "C1'" sing N N 414 UDP C2 N3 sing N N 415 UDP C2 O2 doub N N 416 UDP N3 C4 sing N N 417 UDP N3 HN3 sing N N 418 UDP C4 C5 sing N N 419 UDP C4 O4 doub N N 420 UDP C5 C6 doub N N 421 UDP C5 H5 sing N N 422 UDP C6 H6 sing N N 423 UDP "C1'" "C2'" sing N N 424 UDP "C1'" "O4'" sing N N 425 UDP "C1'" "H1'" sing N N 426 UDP "C2'" "O2'" sing N N 427 UDP "C2'" "C3'" sing N N 428 UDP "C2'" "H2'" sing N N 429 UDP "O2'" "HO2'" sing N N 430 UDP "C3'" "C4'" sing N N 431 UDP "C3'" "O3'" sing N N 432 UDP "C3'" "H3'" sing N N 433 UDP "C4'" "O4'" sing N N 434 UDP "C4'" "C5'" sing N N 435 UDP "C4'" "H4'" sing N N 436 UDP "O3'" "HO3'" sing N N 437 UDP "C5'" "O5'" sing N N 438 UDP "C5'" "H5'1" sing N N 439 UDP "C5'" "H5'2" sing N N 440 UDP "O5'" PA sing N N 441 UDP PA O1A doub N N 442 UDP PA O2A sing N N 443 UDP PA O3A sing N N 444 UDP O2A HOA2 sing N N 445 UDP O3A PB sing N N 446 UDP PB O1B doub N N 447 UDP PB O2B sing N N 448 UDP PB O3B sing N N 449 UDP O2B HOB2 sing N N 450 UDP O3B HOB3 sing N N 451 VAL N CA sing N N 452 VAL N H sing N N 453 VAL N H2 sing N N 454 VAL CA C sing N N 455 VAL CA CB sing N N 456 VAL CA HA sing N N 457 VAL C O doub N N 458 VAL C OXT sing N N 459 VAL CB CG1 sing N N 460 VAL CB CG2 sing N N 461 VAL CB HB sing N N 462 VAL CG1 HG11 sing N N 463 VAL CG1 HG12 sing N N 464 VAL CG1 HG13 sing N N 465 VAL CG2 HG21 sing N N 466 VAL CG2 HG22 sing N N 467 VAL CG2 HG23 sing N N 468 VAL OXT HXT sing N N 469 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 NDG 1 C NDG 1 A NLC 1370 n C 2 GAL 2 C GAL 2 A NLC 1370 n D 2 NDG 1 D NDG 1 B NLC 1370 n D 2 GAL 2 D GAL 2 B NLC 1370 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-4DGlcpNAca1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NDG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NDG 1 n 2 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "URIDINE-5'-DIPHOSPHATE" UDP 4 'MANGANESE (II) ION' MN 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1K4V _pdbx_initial_refinement_model.details 'PDB ENTRY 1K4V' #