HEADER SIGNALING PROTEIN 17-JUN-08 2VW8 TITLE CRYSTAL STRUCTURE OF QUINOLONE SIGNAL RESPONSE PROTEIN PQSE FROM TITLE 2 PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PA1000; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PQSE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS QUINOLONE SIGNAL RESPONSE PROTEIN, SIGNALING PROTEIN, SSPF EXPDTA X-RAY DIFFRACTION AUTHOR L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON,M.OKE,J.H.NAISMITH,M.F.WHITE REVDAT 4 08-MAY-24 2VW8 1 REMARK LINK REVDAT 3 24-JAN-18 2VW8 1 SOURCE REVDAT 2 10-AUG-11 2VW8 1 AUTHOR JRNL REMARK VERSN REVDAT 1 14-JUL-10 2VW8 0 JRNL AUTH M.OKE,L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON,X.YAN, JRNL AUTH 2 M.KEROU,N.D.WEIKART,N.KADI,M.A.SHEIKH,S.SCHMELZ,M.DORWARD, JRNL AUTH 3 M.ZAWADZKI,C.COZENS,H.FALCONER,H.POWERS,I.M.OVERTON, JRNL AUTH 4 C.A.J.VAN NIEKERK,X.PENG,P.PATEL,R.A.GARRETT, JRNL AUTH 5 D.PRANGISHVILI C,H.BOTTING,P.J.COOTE,D.T.F.DRYDEN, JRNL AUTH 6 G.J.BARTON,U.SCHWARZ-LINEK,G.L.CHALLIS,G.L.TAYLOR,M.F.WHITE, JRNL AUTH 7 J.H.NAISMITH JRNL TITL THE SCOTTISH STRUCTURAL PROTEOMICS FACILITY: TARGETS, JRNL TITL 2 METHODS AND OUTPUTS. JRNL REF J.STRUCT.FUNCT.GENOMICS V. 11 167 2010 JRNL REFN ISSN 1345-711X JRNL PMID 20419351 JRNL DOI 10.1007/S10969-010-9090-Y REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 48512 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2616 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3432 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1940 REMARK 3 BIN FREE R VALUE SET COUNT : 191 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2393 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 175 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.26000 REMARK 3 B22 (A**2) : 0.78000 REMARK 3 B33 (A**2) : -0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.064 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.038 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.963 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2488 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1732 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3384 ; 1.173 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4166 ; 0.883 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 309 ; 5.404 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;33.993 ;22.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;11.236 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;13.754 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 365 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2807 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 542 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 473 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1864 ; 0.193 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1188 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1361 ; 0.082 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 126 ; 0.111 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.156 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 91 ; 0.326 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.096 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1965 ; 0.848 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2407 ; 0.933 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1127 ; 1.912 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 972 ; 2.656 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 21.9690 10.2290 13.8760 REMARK 3 T TENSOR REMARK 3 T11: -0.0827 T22: -0.0663 REMARK 3 T33: -0.0665 T12: 0.0042 REMARK 3 T13: -0.0014 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.9617 L22: 1.1624 REMARK 3 L33: 1.4462 L12: 0.1918 REMARK 3 L13: 0.1243 L23: 0.1806 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: -0.0155 S13: 0.0645 REMARK 3 S21: 0.0256 S22: 0.0405 S23: 0.1230 REMARK 3 S31: -0.0931 S32: -0.1643 S33: 0.0019 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 178 REMARK 3 ORIGIN FOR THE GROUP (A): 28.0610 -5.1140 10.1580 REMARK 3 T TENSOR REMARK 3 T11: -0.0650 T22: -0.0854 REMARK 3 T33: -0.0695 T12: -0.0300 REMARK 3 T13: -0.0019 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.5125 L22: 0.6889 REMARK 3 L33: 1.1424 L12: 0.1773 REMARK 3 L13: 0.2236 L23: 0.1672 REMARK 3 S TENSOR REMARK 3 S11: -0.0293 S12: 0.0295 S13: -0.2663 REMARK 3 S21: 0.0286 S22: 0.0610 S23: 0.0225 REMARK 3 S31: 0.1915 S32: -0.1078 S33: -0.0317 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 179 A 297 REMARK 3 ORIGIN FOR THE GROUP (A): 45.4760 8.0960 8.4420 REMARK 3 T TENSOR REMARK 3 T11: -0.0735 T22: -0.0957 REMARK 3 T33: -0.0852 T12: -0.0036 REMARK 3 T13: -0.0102 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.3421 L22: 0.2431 REMARK 3 L33: 0.6787 L12: 0.2978 REMARK 3 L13: 0.0110 L23: -0.0636 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.0217 S13: 0.0273 REMARK 3 S21: 0.0192 S22: 0.0078 S23: -0.0397 REMARK 3 S31: -0.0278 S32: -0.0055 S33: -0.0123 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 403 REMARK 3 ORIGIN FOR THE GROUP (A): 36.5576 11.7670 13.7667 REMARK 3 T TENSOR REMARK 3 T11: 0.0199 T22: -0.0293 REMARK 3 T33: 0.0608 T12: 0.0120 REMARK 3 T13: 0.0055 T23: -0.0341 REMARK 3 L TENSOR REMARK 3 L11: 115.9734 L22: 78.6637 REMARK 3 L33: 1.1090 L12: 95.5138 REMARK 3 L13: -11.3411 L23: -9.3403 REMARK 3 S TENSOR REMARK 3 S11: -0.2199 S12: 1.1065 S13: 2.7272 REMARK 3 S21: 1.3198 S22: 0.7391 S23: 0.4081 REMARK 3 S31: -1.6809 S32: 1.0862 S33: -0.5192 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. REMARK 4 REMARK 4 2VW8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1290036584. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.737 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51128 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.780 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.3900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.74 REMARK 200 R MERGE FOR SHELL (I) : 0.42000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.110 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG 400, 0.1M NA-CACODYLATE, REMARK 280 PH6.0, 0.2M MAGNESIUM ACETATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.68500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.84500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.68500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.84500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 103.37000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 299 REMARK 465 LEU A 300 REMARK 465 ASP A 301 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 298 CA C O CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 5 41.70 -145.02 REMARK 500 GLU A 38 141.70 81.36 REMARK 500 ALA A 156 59.42 -143.18 REMARK 500 ASP A 196 -54.54 -125.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 402 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 NE2 REMARK 620 2 HIS A 71 ND1 91.8 REMARK 620 3 HIS A 159 NE2 97.0 94.8 REMARK 620 4 ASP A 178 OD2 89.0 174.4 90.5 REMARK 620 5 CAC A 403 O1 173.4 94.8 81.8 84.5 REMARK 620 6 HOH A2174 O 107.8 101.4 149.8 73.1 71.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 73 OD2 REMARK 620 2 HIS A 74 NE2 86.2 REMARK 620 3 ASP A 178 OD2 155.1 88.1 REMARK 620 4 HIS A 221 NE2 85.7 93.1 118.9 REMARK 620 5 CAC A 403 O2 93.6 174.9 90.0 92.0 REMARK 620 6 HOH A2174 O 82.0 90.0 73.7 167.1 84.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE2 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 501 REMARK 999 REMARK 999 SEQUENCE REMARK 999 FIRST TWO RESIDUES AND LAST FOUR RESIDUES ARE DISORDERED DBREF 2VW8 A 1 301 UNP P20581 Y1000_PSEAE 1 301 SEQADV 2VW8 GLY A -1 UNP P20581 EXPRESSION TAG SEQADV 2VW8 SER A 0 UNP P20581 EXPRESSION TAG SEQRES 1 A 303 GLY SER MET LEU ARG LEU SER ALA PRO GLY GLN LEU ASP SEQRES 2 A 303 ASP ASP LEU CYS LEU LEU GLY ASP VAL GLN VAL PRO VAL SEQRES 3 A 303 PHE LEU LEU ARG LEU GLY GLU ALA SER TRP ALA LEU VAL SEQRES 4 A 303 GLU GLY GLY ILE SER ARG ASP ALA GLU LEU VAL TRP ALA SEQRES 5 A 303 ASP LEU CYS ARG TRP VAL ALA ASP PRO SER GLN VAL HIS SEQRES 6 A 303 TYR TRP LEU ILE THR HIS LYS HIS TYR ASP HIS CYS GLY SEQRES 7 A 303 LEU LEU PRO TYR LEU CYS PRO ARG LEU PRO ASN VAL GLN SEQRES 8 A 303 VAL LEU ALA SER GLU ARG THR CYS GLN ALA TRP LYS SER SEQRES 9 A 303 GLU SER ALA VAL ARG VAL VAL GLU ARG LEU ASN ARG GLN SEQRES 10 A 303 LEU LEU ARG ALA GLU GLN ARG LEU PRO GLU ALA CYS ALA SEQRES 11 A 303 TRP ASP ALA LEU PRO VAL ARG ALA VAL ALA ASP GLY GLU SEQRES 12 A 303 TRP LEU GLU LEU GLY PRO ARG HIS ARG LEU GLN VAL ILE SEQRES 13 A 303 GLU ALA HIS GLY HIS SER ASP ASP HIS VAL VAL PHE TYR SEQRES 14 A 303 ASP VAL ARG ARG ARG ARG LEU PHE CYS GLY ASP ALA LEU SEQRES 15 A 303 GLY GLU PHE ASP GLU ALA GLU GLY VAL TRP ARG PRO LEU SEQRES 16 A 303 VAL PHE ASP ASP MET GLU ALA TYR LEU GLU SER LEU GLU SEQRES 17 A 303 ARG LEU GLN ARG LEU PRO THR LEU LEU GLN LEU ILE PRO SEQRES 18 A 303 GLY HIS GLY GLY LEU LEU ARG GLY ARG LEU ALA ALA ASP SEQRES 19 A 303 GLY ALA GLU SER ALA TYR THR GLU CYS LEU ARG LEU CYS SEQRES 20 A 303 ARG ARG LEU LEU TRP ARG GLN SER MET GLY GLU SER LEU SEQRES 21 A 303 ASP GLU LEU SER GLU GLU LEU HIS ARG ALA TRP GLY GLY SEQRES 22 A 303 GLN SER VAL ASP PHE LEU PRO GLY GLU LEU HIS LEU GLY SEQRES 23 A 303 SER MET ARG ARG MET LEU GLU ILE LEU SER ARG GLN ALA SEQRES 24 A 303 LEU PRO LEU ASP HET FE2 A 401 1 HET FE2 A 402 1 HET CAC A 403 5 HET EDO A 501 4 HETNAM FE2 FE (II) ION HETNAM CAC CACODYLATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN CAC DIMETHYLARSINATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 FE2 2(FE 2+) FORMUL 4 CAC C2 H6 AS O2 1- FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *175(H2 O) HELIX 1 1 ILE A 41 ARG A 43 5 3 HELIX 2 2 ASP A 44 VAL A 56 1 13 HELIX 3 3 ASP A 58 SER A 60 5 3 HELIX 4 4 LEU A 77 CYS A 82 1 6 HELIX 5 5 PRO A 83 LEU A 85 5 3 HELIX 6 6 GLU A 94 TRP A 100 1 7 HELIX 7 7 SER A 102 LEU A 116 1 15 HELIX 8 8 ALA A 128 LEU A 132 5 5 HELIX 9 9 ASP A 197 ARG A 210 1 14 HELIX 10 10 GLY A 227 ASP A 232 1 6 HELIX 11 11 ASP A 232 MET A 254 1 23 HELIX 12 12 SER A 257 GLY A 270 1 14 HELIX 13 13 GLY A 271 VAL A 274 5 4 HELIX 14 14 PRO A 278 ALA A 297 1 20 SHEET 1 AA 7 ARG A 3 LEU A 4 0 SHEET 2 AA 7 LEU A 224 ARG A 226 -1 O LEU A 224 N LEU A 4 SHEET 3 AA 7 GLN A 216 PRO A 219 -1 O LEU A 217 N LEU A 225 SHEET 4 AA 7 ARG A 173 GLY A 177 1 O LEU A 174 N ILE A 218 SHEET 5 AA 7 VAL A 164 ASP A 168 -1 O PHE A 166 N PHE A 175 SHEET 6 AA 7 HIS A 149 GLU A 155 -1 O GLN A 152 N TYR A 167 SHEET 7 AA 7 TRP A 142 GLY A 146 -1 O LEU A 143 N LEU A 151 SHEET 1 AB 7 GLY A 8 ASP A 11 0 SHEET 2 AB 7 LEU A 14 LEU A 17 -1 O LEU A 14 N LEU A 10 SHEET 3 AB 7 VAL A 24 GLY A 30 -1 O VAL A 24 N LEU A 17 SHEET 4 AB 7 SER A 33 VAL A 37 -1 O SER A 33 N LEU A 29 SHEET 5 AB 7 VAL A 62 LEU A 66 1 N HIS A 63 O TRP A 34 SHEET 6 AB 7 GLN A 89 SER A 93 1 O GLN A 89 N TRP A 65 SHEET 7 AB 7 VAL A 134 VAL A 137 1 O ARG A 135 N ALA A 92 SHEET 1 AC 2 GLU A 182 PHE A 183 0 SHEET 2 AC 2 TRP A 190 ARG A 191 -1 O ARG A 191 N GLU A 182 LINK NE2 HIS A 69 FE FE2 A 402 1555 1555 2.20 LINK ND1 HIS A 71 FE FE2 A 402 1555 1555 2.19 LINK OD2 ASP A 73 FE FE2 A 401 1555 1555 2.35 LINK NE2 HIS A 74 FE FE2 A 401 1555 1555 2.15 LINK NE2 HIS A 159 FE FE2 A 402 1555 1555 2.11 LINK OD2 ASP A 178 FE FE2 A 401 1555 1555 2.18 LINK OD2 ASP A 178 FE FE2 A 402 1555 1555 2.48 LINK NE2 HIS A 221 FE FE2 A 401 1555 1555 2.16 LINK FE FE2 A 401 O2 CAC A 403 1555 1555 1.96 LINK FE FE2 A 401 O HOH A2174 1555 1555 2.26 LINK FE FE2 A 402 O1 CAC A 403 1555 1555 2.37 LINK FE FE2 A 402 O HOH A2174 1555 1555 1.94 SITE 1 AC1 7 ASP A 73 HIS A 74 ASP A 178 HIS A 221 SITE 2 AC1 7 FE2 A 402 CAC A 403 HOH A2174 SITE 1 AC2 7 HIS A 69 HIS A 71 HIS A 159 ASP A 178 SITE 2 AC2 7 FE2 A 401 CAC A 403 HOH A2174 SITE 1 AC3 10 HIS A 71 ASP A 73 HIS A 159 ASP A 178 SITE 2 AC3 10 PHE A 195 HIS A 221 FE2 A 401 FE2 A 402 SITE 3 AC3 10 HOH A2174 HOH A2175 SITE 1 AC4 3 GLU A 103 GLU A 110 GLU A 141 CRYST1 103.370 57.690 50.240 90.00 97.07 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009674 0.000000 0.001200 0.00000 SCALE2 0.000000 0.017334 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020057 0.00000