HEADER PROTEIN BINDING 30-JUL-08 2VZ5 TITLE STRUCTURE OF THE PDZ DOMAIN OF TAX1 (HUMAN T-CELL LEUKEMIA VIRUS TYPE TITLE 2 I) BINDING PROTEIN 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAX1-BINDING PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PDZ DOMAIN, RESIDUES 13-113; COMPND 5 SYNONYM: TAX INTERACTION PROTEIN 1, TIP-1, GLUTAMINASE-INTERACTING COMPND 6 PROTEIN, HUMAN T-CELL LEUKEMIA VIRUS TYPE I BINDING PROTEIN 3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA-R3 KEYWDS WNT SIGNALING PATHWAY, PROTEIN BINDING, NUCLEUS, CYTOPLASM, PDZ KEYWDS 2 DOMAIN EXPDTA X-RAY DIFFRACTION AUTHOR J.W.MURRAY,N.SHAFQAT,W.YUE,E.PILKA,C.JOHANNSSON,E.SALAH,C.COOPER, AUTHOR 2 J.M.ELKINS,A.C.PIKE,A.ROOS,P.FILIPPAKOPOULOS,F.VON DELFT, AUTHOR 3 M.WICKSTROEM,C.BOUNTRA,A.M.EDWARDS,C.H.ARROWSMITH,U.OPPERMANN REVDAT 5 13-DEC-23 2VZ5 1 REMARK LINK REVDAT 4 24-JAN-18 2VZ5 1 AUTHOR JRNL REVDAT 3 25-JAN-17 2VZ5 1 REMARK VERSN FORMUL ATOM REVDAT 3 2 1 ANISOU REVDAT 2 24-FEB-09 2VZ5 1 VERSN REVDAT 1 12-AUG-08 2VZ5 0 JRNL AUTH J.W.MURRAY,N.SHAFQAT,W.YUE,E.PILKA,C.JOHANNSSON,E.SALAH, JRNL AUTH 2 C.COOPER,J.M.ELKINS,A.C.PIKE,A.ROOS,P.FILIPPAKOPOULOS, JRNL AUTH 3 F.VON DELFT,M.WICKSTROEM,C.BOUNTRA,A.M.EDWARDS, JRNL AUTH 4 C.H.ARROWSMITH,U.OPPERMANN JRNL TITL THE STRUCTURE OF THE PDZ DOMAIN OF TAX1BP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 13415 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.8208 - 2.9705 1.00 2833 134 0.1931 0.2357 REMARK 3 2 2.9705 - 2.3584 0.99 2616 132 0.1447 0.2230 REMARK 3 3 2.3584 - 2.0605 0.98 2530 153 0.1440 0.1805 REMARK 3 4 2.0605 - 1.8722 0.95 2445 130 0.1511 0.1948 REMARK 3 5 1.8722 - 1.7381 0.91 2325 117 0.1993 0.2594 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 59.29 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1764 REMARK 3 ANGLE : 0.942 3175 REMARK 3 CHIRALITY : 0.074 139 REMARK 3 PLANARITY : 0.004 274 REMARK 3 DIHEDRAL : 15.459 468 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 11:113 REMARK 3 ORIGIN FOR THE GROUP (A): 22.2463 0.5700 16.0768 REMARK 3 T TENSOR REMARK 3 T11: 0.1104 T22: 0.1221 REMARK 3 T33: 0.1212 T12: -0.0162 REMARK 3 T13: -0.0068 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 0.6933 L22: 2.4638 REMARK 3 L33: 1.7089 L12: -0.2853 REMARK 3 L13: 0.1560 L23: -0.2647 REMARK 3 S TENSOR REMARK 3 S11: 0.0245 S12: 0.0614 S13: 0.1209 REMARK 3 S21: 0.1205 S22: -0.0643 S23: 0.0270 REMARK 3 S31: -0.0308 S32: 0.0630 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 123:128 REMARK 3 ORIGIN FOR THE GROUP (A): 37.8121 31.5583 27.0576 REMARK 3 T TENSOR REMARK 3 T11: 0.1893 T22: 0.1961 REMARK 3 T33: 0.1507 T12: 0.0073 REMARK 3 T13: 0.0000 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 0.0203 L22: 0.0008 REMARK 3 L33: 0.0372 L12: -0.0315 REMARK 3 L13: 0.0139 L23: -0.0037 REMARK 3 S TENSOR REMARK 3 S11: 0.0649 S12: 0.3974 S13: -0.0177 REMARK 3 S21: -0.3001 S22: -0.0771 S23: 0.0359 REMARK 3 S31: -0.0205 S32: -0.1576 S33: 0.0006 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2VZ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1290037075. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97640 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13938 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.740 REMARK 200 RESOLUTION RANGE LOW (A) : 23.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.82 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.66 REMARK 200 R MERGE FOR SHELL (I) : 0.87000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: PDB ENTRY 2HE2 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% W/V PEG 3350, 0.15 M ZN ACETATE, REMARK 280 0.1 M NA ACETATE PH 3.8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.85933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.42967 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 60.64450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.21483 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 101.07417 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.85933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 40.42967 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 20.21483 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 60.64450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 101.07417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A1133 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 VAL A 0 REMARK 465 ASP A 1 REMARK 465 LEU A 2 REMARK 465 GLY A 3 REMARK 465 THR A 4 REMARK 465 GLU A 5 REMARK 465 ASN A 6 REMARK 465 LEU A 7 REMARK 465 TYR A 8 REMARK 465 PHE A 9 REMARK 465 GLN A 10 REMARK 465 LEU A 114 REMARK 465 GLN A 115 REMARK 465 LYS A 116 REMARK 465 ALA A 117 REMARK 465 VAL A 118 REMARK 465 GLN A 119 REMARK 465 GLN A 120 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 26 CG OD1 ND2 REMARK 470 GLN A 112 CG CD OE1 NE2 REMARK 470 SER A 121 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2111 O HOH A 2112 1.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 23 68.96 -106.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1131 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 62 OE2 REMARK 620 2 GLU A 67 OE2 127.7 REMARK 620 3 IMD A1129 N3 112.8 102.4 REMARK 620 4 IMD A1130 N1 98.4 98.5 117.1 REMARK 620 N 1 2 3 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 1129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IMD A 1130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1131 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1133 DBREF 2VZ5 A -10 12 PDB 2VZ5 2VZ5 -10 12 DBREF 2VZ5 A 13 113 UNP O14907 TX1B3_HUMAN 13 113 DBREF 2VZ5 A 114 128 PDB 2VZ5 2VZ5 114 128 SEQRES 1 A 139 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 139 GLY THR GLU ASN LEU TYR PHE GLN SER MET VAL GLN ARG SEQRES 3 A 139 VAL GLU ILE HIS LYS LEU ARG GLN GLY GLU ASN LEU ILE SEQRES 4 A 139 LEU GLY PHE SER ILE GLY GLY GLY ILE ASP GLN ASP PRO SEQRES 5 A 139 SER GLN ASN PRO PHE SER GLU ASP LYS THR ASP LYS GLY SEQRES 6 A 139 ILE TYR VAL THR ARG VAL SER GLU GLY GLY PRO ALA GLU SEQRES 7 A 139 ILE ALA GLY LEU GLN ILE GLY ASP LYS ILE MET GLN VAL SEQRES 8 A 139 ASN GLY TRP ASP MET THR MET VAL THR HIS ASP GLN ALA SEQRES 9 A 139 ARG LYS ARG LEU THR LYS ARG SER GLU GLU VAL VAL ARG SEQRES 10 A 139 LEU LEU VAL THR ARG GLN SER LEU GLN LYS ALA VAL GLN SEQRES 11 A 139 GLN SER MET LEU SER GLU THR GLU VAL HET IMD A1129 5 HET IMD A1130 5 HET ZN A1131 1 HET ZN A1132 1 HET CL A1133 1 HETNAM IMD IMIDAZOLE HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 2 IMD 2(C3 H5 N2 1+) FORMUL 4 ZN 2(ZN 2+) FORMUL 6 CL CL 1- FORMUL 7 HOH *115(H2 O) HELIX 1 1 ASP A 40 ASN A 44 5 5 HELIX 2 2 GLY A 64 GLY A 70 1 7 HELIX 3 3 THR A 89 THR A 98 1 10 SHEET 1 AA 5 MET A 12 HIS A 19 0 SHEET 2 AA 5 VAL A 104 ARG A 111 -1 O VAL A 105 N ILE A 18 SHEET 3 AA 5 LYS A 76 VAL A 80 -1 O LYS A 76 N THR A 110 SHEET 4 AA 5 ILE A 55 VAL A 60 -1 O ILE A 55 N ILE A 77 SHEET 5 AA 5 PHE A 31 GLY A 35 -1 O SER A 32 N THR A 58 SHEET 1 AB 4 MET A 12 HIS A 19 0 SHEET 2 AB 4 VAL A 104 ARG A 111 -1 O VAL A 105 N ILE A 18 SHEET 3 AB 4 LYS A 76 VAL A 80 -1 O LYS A 76 N THR A 110 SHEET 4 AB 4 TRP A 83 ASP A 84 -1 O TRP A 83 N VAL A 80 SHEET 1 AC 2 LEU A 21 GLN A 23 0 SHEET 2 AC 2 ASN A 26 ILE A 28 -1 O ASN A 26 N GLN A 23 LINK NE2 HIS A 19 ZN ZN A1132 1555 1555 2.21 LINK OE2 GLU A 62 ZN ZN A1131 1555 1555 2.01 LINK OE2 GLU A 67 ZN ZN A1131 1555 1555 2.07 LINK N3 IMD A1129 ZN ZN A1131 1555 1555 2.13 LINK N1 IMD A1130 ZN ZN A1131 1555 1555 1.24 SITE 1 AC1 4 GLU A 62 GLU A 67 IMD A1130 ZN A1131 SITE 1 AC2 6 GLU A 62 GLU A 67 ILE A 68 ASP A 84 SITE 2 AC2 6 IMD A1129 ZN A1131 SITE 1 AC3 4 GLU A 62 GLU A 67 IMD A1129 IMD A1130 SITE 1 AC4 2 HIS A 19 GLU A 48 SITE 1 AC5 3 HIS A 90 HOH A2024 HOH A2081 CRYST1 59.813 59.813 121.289 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016719 0.009653 0.000000 0.00000 SCALE2 0.000000 0.019305 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008245 0.00000