HEADER OXIDOREDUCTASE 01-AUG-08 2VZH OBSLTE 07-AUG-13 2VZH 4LTM TITLE STRUCTURES OF NADH:FMN OXIDOREDUCTASE (EMOB)-FMN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADH-DEPENDENT FMN REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EDTA-DEGRADING BACTERIUM BNC1; SOURCE 3 ORGANISM_TAXID: 85561; SOURCE 4 GENE: EMOB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.S.NISSEN,B.YOUN,B.D.KNOWLES,J.W.BALLINGER,S.Y.JUN,S.M.BELCHIK, AUTHOR 2 L.XUN,C.KANG REVDAT 5 07-AUG-13 2VZH 1 OBSLTE REVDAT 3 24-FEB-09 2VZH 1 VERSN REVDAT 2 21-OCT-08 2VZH 1 AUTHOR JRNL REVDAT 1 12-AUG-08 2VZH 0 JRNL AUTH M.S.NISSEN,B.YOUN,B.D.KNOWLES,J.W.BALLINGER,S.Y.JUN, JRNL AUTH 2 S.M.BELCHIK,L.XUN,C.KANG JRNL TITL CRYSTAL STRUCTURES OF NADH:FMN OXIDOREDUCTASE (EMOB) AT JRNL TITL 2 DIFFERENT STAGES OF CATALYSIS. JRNL REF J.BIOL.CHEM. V. 283 28710 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18701448 JRNL DOI 10.1074/JBC.M804535200 REMARK 2 REMARK 2 RESOLUTION. 2.5 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.5 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99 REMARK 3 NUMBER OF REFLECTIONS : 13826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1418 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 3.85 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 PARAMETER FILE 2 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2VZH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-AUG-08. REMARK 100 THE PDBE ID CODE IS EBI-37097. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 233187 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.50 REMARK 200 RESOLUTION RANGE LOW (A) : 20.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.5 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.1 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.3 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.40667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 86.81333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 43.40667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 86.81333 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 43.40667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 86.81333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 43.40667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 86.81333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 11370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 101.27000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 101.27000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 HOH A2080 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 191 REMARK 465 ASP A 192 REMARK 465 ALA A 193 REMARK 465 THR A 194 REMARK 465 ARG A 195 REMARK 465 ALA A 196 REMARK 465 ALA A 197 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 38 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 38 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ILE A 43 CB - CA - C ANGL. DEV. = -13.1 DEGREES REMARK 500 TYR A 80 CB - CG - CD2 ANGL. DEV. = -3.8 DEGREES REMARK 500 THR A 85 N - CA - CB ANGL. DEV. = -12.3 DEGREES REMARK 500 MET A 131 CG - SD - CE ANGL. DEV. = -14.1 DEGREES REMARK 500 VAL A 133 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 VAL A 133 CG1 - CB - CG2 ANGL. DEV. = 9.6 DEGREES REMARK 500 HIS A 135 CB - CG - ND1 ANGL. DEV. = 8.5 DEGREES REMARK 500 LEU A 142 CA - CB - CG ANGL. DEV. = 18.5 DEGREES REMARK 500 LEU A 142 CB - CG - CD1 ANGL. DEV. = 10.7 DEGREES REMARK 500 LEU A 142 CD1 - CG - CD2 ANGL. DEV. = -23.2 DEGREES REMARK 500 VAL A 149 C - N - CA ANGL. DEV. = 16.2 DEGREES REMARK 500 VAL A 150 N - CA - C ANGL. DEV. = -20.0 DEGREES REMARK 500 VAL A 150 C - N - CA ANGL. DEV. = 17.6 DEGREES REMARK 500 LEU A 154 CA - C - N ANGL. DEV. = -38.6 DEGREES REMARK 500 LEU A 154 O - C - N ANGL. DEV. = 11.1 DEGREES REMARK 500 ALA A 155 C - N - CA ANGL. DEV. = 17.5 DEGREES REMARK 500 SER A 176 CA - C - N ANGL. DEV. = -18.7 DEGREES REMARK 500 SER A 176 O - C - N ANGL. DEV. = 9.9 DEGREES REMARK 500 PRO A 189 CA - C - N ANGL. DEV. = -15.9 DEGREES REMARK 500 PRO A 189 O - C - N ANGL. DEV. = 9.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 82 19.78 59.43 REMARK 500 VAL A 137 -166.20 -78.24 REMARK 500 SER A 145 43.71 -83.88 REMARK 500 GLN A 146 -3.84 -167.58 REMARK 500 SER A 148 176.95 161.03 REMARK 500 VAL A 149 -58.42 -169.13 REMARK 500 VAL A 150 -63.14 -179.83 REMARK 500 LEU A 154 100.37 58.12 REMARK 500 ALA A 155 36.27 138.06 REMARK 500 GLU A 157 151.91 -41.68 REMARK 500 PRO A 189 94.39 -43.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LEU A 154 15.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VZF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF NADH:FMN OXIDOREDUCTASE REMARK 900 (EMOB)-APO FORM REMARK 900 RELATED ID: 2VZJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF NADH:FMN OXIDOREDUCTASE REMARK 900 (EMOB)-FMN, NADH COMPLEX DBREF 2VZH A 1 197 UNP Q9F9T2 Q9F9T2_9PROT 1 197 SEQRES 1 A 197 MET THR TYR SER ILE VAL ALA ILE SER GLY SER PRO SER SEQRES 2 A 197 ARG ASN SER THR THR ALA LYS LEU ALA GLU TYR ALA LEU SEQRES 3 A 197 ALA HIS VAL LEU ALA ARG SER ASP SER GLN GLY ARG HIS SEQRES 4 A 197 ILE HIS VAL ILE ASP LEU ASP PRO LYS ALA LEU LEU ARG SEQRES 5 A 197 GLY ASP LEU SER ASN ALA LYS LEU LYS GLU ALA VAL ASP SEQRES 6 A 197 ALA THR CYS ASN ALA ASP GLY LEU ILE VAL ALA THR PRO SEQRES 7 A 197 ILE TYR LYS ALA SER TYR THR GLY LEU LEU LYS ALA PHE SEQRES 8 A 197 LEU ASP ILE LEU PRO GLN PHE ALA LEU ALA GLY LYS ALA SEQRES 9 A 197 ALA LEU PRO LEU ALA THR GLY GLY SER PRO ALA HIS VAL SEQRES 10 A 197 LEU ALA LEU ASP TYR GLY LEU ARG PRO VAL LEU HIS SER SEQRES 11 A 197 MET GLY VAL ARG HIS VAL VAL GLN SER PHE PHE LEU VAL SEQRES 12 A 197 GLN SER GLN PHE SER VAL VAL ASP GLY LYS LEU ALA VAL SEQRES 13 A 197 GLU ASP ASP VAL ALA SER GLN LEU ASN ASN ALA ILE ASP SEQRES 14 A 197 HIS PHE ARG LEU SER LEU SER SER GLU PRO SER THR ARG SEQRES 15 A 197 HIS LEU GLY HIS PRO ARG PRO SER LEU ASP ALA THR ARG SEQRES 16 A 197 ALA ALA HET FMN A 500 31 HET FMN A 501 31 HETNAM FMN FLAVIN MONONUCLEOTIDE FORMUL 2 FMN 2(C17 H21 N4 O9 P) FORMUL 3 HOH *121(H2 O1) HELIX 1 1 SER A 16 ALA A 31 1 16 HELIX 2 2 ILE A 43 LEU A 45 5 3 HELIX 3 3 ASP A 46 GLY A 53 1 8 HELIX 4 4 ASN A 57 ALA A 70 1 14 HELIX 5 5 THR A 85 ASP A 93 1 9 HELIX 6 6 SER A 113 VAL A 117 5 5 HELIX 7 7 LEU A 118 MET A 131 1 14 HELIX 8 8 GLU A 157 SER A 174 1 18 HELIX 9 9 GLU A 178 LEU A 184 5 7 SHEET 1 AA 5 SER A 35 HIS A 41 0 SHEET 2 AA 5 TYR A 3 SER A 9 1 O TYR A 3 N GLN A 36 SHEET 3 AA 5 GLY A 72 PRO A 78 1 O GLY A 72 N VAL A 6 SHEET 4 AA 5 ALA A 104 GLY A 111 1 O ALA A 104 N LEU A 73 SHEET 5 AA 5 HIS A 135 VAL A 136 1 O HIS A 135 N ALA A 105 SHEET 1 AB 5 SER A 35 HIS A 41 0 SHEET 2 AB 5 TYR A 3 SER A 9 1 O TYR A 3 N GLN A 36 SHEET 3 AB 5 GLY A 72 PRO A 78 1 O GLY A 72 N VAL A 6 SHEET 4 AB 5 ALA A 104 GLY A 111 1 O ALA A 104 N LEU A 73 SHEET 5 AB 5 PHE A 140 VAL A 143 1 O PHE A 140 N ALA A 109 SITE 1 AC1 19 SER A 11 SER A 13 SER A 16 THR A 17 SITE 2 AC1 19 THR A 18 PRO A 78 ILE A 79 TYR A 80 SITE 3 AC1 19 LYS A 81 ALA A 82 ASP A 93 THR A 110 SITE 4 AC1 19 GLY A 111 GLY A 112 SER A 113 HIS A 116 SITE 5 AC1 19 GLN A 144 FMN A 501 HOH A2062 SITE 1 AC2 7 LYS A 81 GLN A 97 GLY A 112 GLN A 144 SITE 2 AC2 7 FMN A 500 HOH A2062 HOH A2070 CRYST1 101.270 101.270 130.220 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009875 0.005701 0.000000 0.00000 SCALE2 0.000000 0.011402 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007679 0.00000