HEADER OXIDOREDUCTASE 28-JUL-08 2VZL TITLE FERREDOXIN-NADP REDUCTASE (MUTATIONS: T155G, A160T, L263P AND Y303S) TITLE 2 COMPLEXED WITH NAD BY COCRYSTALLIZATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN-NADP REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 137-440; COMPND 5 EC: 1.18.1.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC SP.; SOURCE 3 ORGANISM_TAXID: 1168; SOURCE 4 STRAIN: PCC 7119; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL-21; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET 28B KEYWDS PHYCOBILISOME, OXIDOREDUCTASE, FAD, NADP, MEMBRANE, THYLAKOID, KEYWDS 2 FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.HERGUEDAS,M.MARTINEZ-JULVEZ,J.A.HERMOSO,J.R.PEREGRINA,M.MEDINA REVDAT 2 13-DEC-23 2VZL 1 REMARK REVDAT 1 21-APR-09 2VZL 0 JRNL AUTH J.R.PEREGRINA,B.HERGUEDAS,J.A.HERMOSO,M.MARTINEZ-JULVEZ, JRNL AUTH 2 M.MEDINA JRNL TITL PROTEIN MOTIFS INVOLVED IN COENZYME INTERACTION AND JRNL TITL 2 ENZYMATIC EFFICIENCY IN ANABAENA FERREDOXIN-NADP+ REDUCTASE. JRNL REF BIOCHEMISTRY V. 48 3109 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19219975 JRNL DOI 10.1021/BI802077C REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 28836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2185 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2081 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 169 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2330 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 86 REMARK 3 SOLVENT ATOMS : 429 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : 0.11000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.121 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.605 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2486 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2173 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3386 ; 1.049 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5098 ; 0.714 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 294 ; 5.126 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 356 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2686 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 457 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 458 ; 0.177 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2556 ; 0.231 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1335 ; 0.076 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 276 ; 0.097 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 4 ; 0.061 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 38 ; 0.258 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 27 ; 0.087 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1466 ; 0.531 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2371 ; 1.005 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1020 ; 1.226 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1015 ; 2.158 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2VZL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JUL-08. REMARK 100 THE DEPOSITION ID IS D_1290036974. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER-NONIUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER-NONIUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31094 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 43.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1QUE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 6000 0.1M ACNA, PH 5.5 B-OCTYL REMARK 280 GLYCOSIDE AT 2%(W/V) 10-60 MM NAD REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.24800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.12400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 48.18600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 16.06200 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 80.31000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, THR 292 TO GLY REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ALA 297 TO THR REMARK 400 ENGINEERED RESIDUE IN CHAIN A, LEU 400 TO PRO REMARK 400 ENGINEERED RESIDUE IN CHAIN A, TYR 440 TO SER REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 THR A 1 REMARK 465 GLN A 2 REMARK 465 ALA A 3 REMARK 465 LYS A 4 REMARK 465 ALA A 5 REMARK 465 LYS A 6 REMARK 465 HIS A 7 REMARK 465 ALA A 8 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 246 CD GLU A 246 OE2 0.075 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 19 69.94 -151.96 REMARK 500 PRO A 107 46.68 -69.91 REMARK 500 GLU A 111 -118.42 -179.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A2013 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A2014 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH A2031 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH A2044 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A2090 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A2207 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A2208 DISTANCE = 5.95 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NAD): ONLY ADP MOEITY IS REMARK 600 OBSERVED TWO ALTERNATE CONFORMATIONS FOR PYROPHOSPHATE-A REMARK 600 AND B-ARE OBSERVED-OCCUPANCY 0.5 FOR EACH ATOM. REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAD A 305 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QGY RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BYGLU (K75E) REMARK 900 RELATED ID: 1H85 RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH VAL 136 REPLACED BY LEU REMARK 900 (V136L) REMARK 900 RELATED ID: 1H42 RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH THR 155 REPLACED BY GLY, ALA REMARK 900 160 REPLACED BY THR AND LEU 263 REPLACED BY PRO (T155G- A160T-L263P) REMARK 900 RELATED ID: 1QH0 RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LEU 76 MUTATED BYASP AND LEU REMARK 900 78 MUTATED BY ASP REMARK 900 RELATED ID: 2BMW RELATED DB: PDB REMARK 900 FERREDOXIN: NADP REDUCTASE MUTANT WITH THR 155 REPLACED BY GLY, ALA REMARK 900 160 REPLACED BY THR, LEU 263 REPLACED BY PRO, ARG 264 REPLACED BY REMARK 900 PRO AND GLY 265 REPLACED BY PRO (T155G-A160T-L263P-R264P-G265P) REMARK 900 RELATED ID: 1GO2 RELATED DB: PDB REMARK 900 STRUCTURE OF FERREDOXIN-NADP+ REDUCTASE WITH LYS 72 REPLACED BY GLU REMARK 900 (K72E) REMARK 900 RELATED ID: 1QGZ RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LEU 78 REPLACED BYASP (L78D) REMARK 900 RELATED ID: 1OGJ RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LEU 263 REPLACED BY PRO REMARK 900 (L263P) REMARK 900 RELATED ID: 1B2R RELATED DB: PDB REMARK 900 FERREDOXIN-NADP+ REDUCTASE (MUTATION: E 301 A) REMARK 900 RELATED ID: 1EWY RELATED DB: PDB REMARK 900 ANABAENA PCC7119 FERREDOXIN:FERREDOXIN-NADP+- REDUCTASE COMPLEX REMARK 900 RELATED ID: 1GJR RELATED DB: PDB REMARK 900 FERREDOXIN-NADP+ REDUCTASE COMPLEXED WITH NADP + BY REMARK 900 COCRYSTALLIZATION REMARK 900 RELATED ID: 1QUE RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF THE FERREDOXIN:NADP+ REDUCTASE FROM THE REMARK 900 CYANOBACTERIUM ANABAENA PCC 7119 AT 1.8 ANGSTROMS REMARK 900 RELATED ID: 1W87 RELATED DB: PDB REMARK 900 FERREDOXIN-NADP REDUCTASE (MUTATION: Y 303 W ) COMPLEXED WITH NADP REMARK 900 BY COCRYSTALLIZATION REMARK 900 RELATED ID: 1W34 RELATED DB: PDB REMARK 900 FERREDOXIN-NADP REDUCTASE (MUTATION: Y 303 S ) REMARK 900 RELATED ID: 1QUF RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF A COMPLEX NADP+- FERREDOXIN:NADP+ REDUCTASE FROM REMARK 900 THE CYANOBACTERIUM ANABAENA PCC 7119 AT 2.25 ANGSTROMS REMARK 900 RELATED ID: 1E64 RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY GLN (K75Q) REMARK 900 RELATED ID: 2BSA RELATED DB: PDB REMARK 900 FERREDOXIN-NADP REDUCTASE (MUTATION: Y 303 S ) COMPLEXED WITH NADP REMARK 900 RELATED ID: 1GR1 RELATED DB: PDB REMARK 900 STRUCTURE OF FERREDOXIN-NADP+ REDUCTASE WITH GLU 139 REPLACED BY REMARK 900 LYS (E139K) REMARK 900 RELATED ID: 1OGI RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH THR 155 REPLACED BY GLY AND REMARK 900 ALA 160 REPLACED BY THR (T155G-A160T) REMARK 900 RELATED ID: 1W35 RELATED DB: PDB REMARK 900 FERREDOXIN-NADP+ REDUCTASE (MUTATION: Y 303 W) REMARK 900 RELATED ID: 1BJK RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH ARG 264 REPLACED BY GLU REMARK 900 (R264E) REMARK 900 RELATED ID: 1E63 RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY SER (K75S) REMARK 900 RELATED ID: 1BQE RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH THR 155 REPLACED BYGLY REMARK 900 (T155G) REMARK 900 RELATED ID: 1E62 RELATED DB: PDB REMARK 900 FERREDOXIN:NADP+ REDUCTASE MUTANT WITH LYS 75 REPLACED BY ARG (K75R) REMARK 900 RELATED ID: 2VYQ RELATED DB: PDB REMARK 900 FERREDOXIN:NADP REDUCTASE MUTANT WITH THR 155 REPLACED BY GLY, ALA REMARK 900 160 REPLACED BY THR, LEU 263 REPLACED BY PRO AND TRY 303 REPLACED REMARK 900 BY SER (T155G-A160T-L263P-Y303S) REMARK 999 REMARK 999 SEQUENCE REMARK 999 FNR MUTANT (T155G, A160T, L263P, Y303S) DBREF 2VZL A 0 303 UNP P21890 FENR_ANASO 137 440 SEQADV 2VZL GLY A 155 UNP P21890 THR 292 ENGINEERED MUTATION SEQADV 2VZL THR A 160 UNP P21890 ALA 297 ENGINEERED MUTATION SEQADV 2VZL PRO A 263 UNP P21890 LEU 400 ENGINEERED MUTATION SEQADV 2VZL SER A 303 UNP P21890 TYR 440 ENGINEERED MUTATION SEQRES 1 A 304 MET THR GLN ALA LYS ALA LYS HIS ALA ASP VAL PRO VAL SEQRES 2 A 304 ASN LEU TYR ARG PRO ASN ALA PRO PHE ILE GLY LYS VAL SEQRES 3 A 304 ILE SER ASN GLU PRO LEU VAL LYS GLU GLY GLY ILE GLY SEQRES 4 A 304 ILE VAL GLN HIS ILE LYS PHE ASP LEU THR GLY GLY ASN SEQRES 5 A 304 LEU LYS TYR ILE GLU GLY GLN SER ILE GLY ILE ILE PRO SEQRES 6 A 304 PRO GLY VAL ASP LYS ASN GLY LYS PRO GLU LYS LEU ARG SEQRES 7 A 304 LEU TYR SER ILE ALA SER THR ARG HIS GLY ASP ASP VAL SEQRES 8 A 304 ASP ASP LYS THR ILE SER LEU CYS VAL ARG GLN LEU GLU SEQRES 9 A 304 TYR LYS HIS PRO GLU SER GLY GLU THR VAL TYR GLY VAL SEQRES 10 A 304 CYS SER THR TYR LEU THR HIS ILE GLU PRO GLY SER GLU SEQRES 11 A 304 VAL LYS ILE THR GLY PRO VAL GLY LYS GLU MET LEU LEU SEQRES 12 A 304 PRO ASP ASP PRO GLU ALA ASN VAL ILE MET LEU ALA GLY SEQRES 13 A 304 GLY THR GLY ILE THR PRO MET ARG THR TYR LEU TRP ARG SEQRES 14 A 304 MET PHE LYS ASP ALA GLU ARG ALA ALA ASN PRO GLU TYR SEQRES 15 A 304 GLN PHE LYS GLY PHE SER TRP LEU VAL PHE GLY VAL PRO SEQRES 16 A 304 THR THR PRO ASN ILE LEU TYR LYS GLU GLU LEU GLU GLU SEQRES 17 A 304 ILE GLN GLN LYS TYR PRO ASP ASN PHE ARG LEU THR TYR SEQRES 18 A 304 ALA ILE SER ARG GLU GLN LYS ASN PRO GLN GLY GLY ARG SEQRES 19 A 304 MET TYR ILE GLN ASP ARG VAL ALA GLU HIS ALA ASP GLU SEQRES 20 A 304 LEU TRP GLN LEU ILE LYS ASN GLN LYS THR HIS THR TYR SEQRES 21 A 304 ILE CYS GLY PRO ARG GLY MET GLU GLU GLY ILE ASP ALA SEQRES 22 A 304 ALA LEU SER ALA ALA ALA ALA LYS GLU GLY VAL THR TRP SEQRES 23 A 304 SER ASP TYR GLN LYS ASP LEU LYS LYS ALA GLY ARG TRP SEQRES 24 A 304 HIS VAL GLU THR SER HET FAD A 304 53 HET NAD A 305 35 HET GOL A 306 6 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 NAD C21 H27 N7 O14 P2 FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *429(H2 O) HELIX 1 1 GLY A 115 HIS A 123 1 9 HELIX 2 2 GLY A 158 LYS A 171 1 14 HELIX 3 3 LYS A 171 ASN A 178 1 8 HELIX 4 4 THR A 195 ILE A 199 5 5 HELIX 5 5 TYR A 201 TYR A 212 1 12 HELIX 6 6 TYR A 235 HIS A 243 1 9 HELIX 7 7 HIS A 243 LYS A 252 1 10 HELIX 8 8 GLY A 265 LYS A 280 1 16 HELIX 9 9 THR A 284 ALA A 295 1 12 SHEET 1 AA 6 ARG A 77 SER A 80 0 SHEET 2 AA 6 SER A 59 ILE A 63 -1 O ILE A 60 N TYR A 79 SHEET 3 AA 6 GLU A 129 VAL A 136 -1 O LYS A 131 N ILE A 63 SHEET 4 AA 6 PHE A 21 PRO A 30 -1 O PHE A 21 N ILE A 132 SHEET 5 AA 6 VAL A 40 ASP A 46 -1 O HIS A 42 N GLU A 29 SHEET 6 AA 6 THR A 94 ARG A 100 -1 O ILE A 95 N PHE A 45 SHEET 1 AB 2 GLU A 103 LYS A 105 0 SHEET 2 AB 2 THR A 112 TYR A 114 -1 O VAL A 113 N TYR A 104 SHEET 1 AC 5 PHE A 216 ILE A 222 0 SHEET 2 AC 5 SER A 187 VAL A 193 1 O SER A 187 N ARG A 217 SHEET 3 AC 5 ASN A 149 GLY A 155 1 O VAL A 150 N TRP A 188 SHEET 4 AC 5 THR A 256 GLY A 262 1 O HIS A 257 N ILE A 151 SHEET 5 AC 5 TRP A 298 THR A 302 1 O HIS A 299 N ILE A 260 CISPEP 1 GLY A 134 PRO A 135 0 -1.15 SITE 1 AC1 25 ARG A 77 LEU A 78 TYR A 79 SER A 80 SITE 2 AC1 25 CYS A 98 VAL A 99 ARG A 100 LEU A 102 SITE 3 AC1 25 TYR A 104 GLY A 115 VAL A 116 CYS A 117 SITE 4 AC1 25 SER A 118 THR A 157 THR A 160 GLU A 301 SITE 5 AC1 25 NAD A 305 HOH A2145 HOH A2417 HOH A2418 SITE 6 AC1 25 HOH A2419 HOH A2420 HOH A2421 HOH A2422 SITE 7 AC1 25 HOH A2423 SITE 1 AC2 14 SER A 80 ARG A 100 THR A 157 GLY A 158 SITE 2 AC2 14 CYS A 261 GLY A 262 PRO A 263 GLU A 301 SITE 3 AC2 14 SER A 303 FAD A 304 HOH A2421 HOH A2424 SITE 4 AC2 14 HOH A2425 HOH A2427 SITE 1 AC3 5 HIS A 42 ARG A 163 TYR A 201 GLU A 204 SITE 2 AC3 5 HOH A2286 CRYST1 86.888 86.888 96.372 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011509 0.006645 0.000000 0.00000 SCALE2 0.000000 0.013290 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010376 0.00000