HEADER HYDROLASE 13-OCT-08 2W11 TITLE STRUCTURE OF THE L-2-HALOACID DEHALOGENASE FROM SULFOLOBUS TOKODAII COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-HALOALKANOIC ACID DEHALOGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: L-HALOACID DEHALOGENASE; COMPND 5 EC: 3.8.1.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TOKODAII; SOURCE 3 ORGANISM_TAXID: 111955; SOURCE 4 STRAIN: 7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS HALOACID DEHALOGENASE, HAD, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.A.RYE,M.N.ISUPOV,A.A.LEBEDEV,J.A.LITTLECHILD REVDAT 3 13-DEC-23 2W11 1 REMARK REVDAT 2 01-SEP-09 2W11 1 JRNL REMARK HET HETNAM REVDAT 2 2 1 HETSYN FORMUL HETATM CONECT REVDAT 2 3 1 MASTER REVDAT 1 09-DEC-08 2W11 0 JRNL AUTH C.A.RYE,M.N.ISUPOV,A.A.LEBEDEV,J.A.LITTLECHILD JRNL TITL BIOCHEMICAL AND STRUCTURAL STUDIES OF A L-HALOACID JRNL TITL 2 DEHALOGENASE FROM THE THERMOPHILIC ARCHAEON SULFOLOBUS JRNL TITL 3 TOKODAII. JRNL REF EXTREMOPHILES V. 13 179 2009 JRNL REFN ISSN 1431-0651 JRNL PMID 19039518 JRNL DOI 10.1007/S00792-008-0208-0 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.A.RYE,M.N.ISUPOV,A.A.LEBEDEV,J.A.LITTLECHILD REMARK 1 TITL AN ORDER-DISORDER TWIN CRYSTAL OF L-2-HALOACID DEHALOGENASE REMARK 1 TITL 2 FROM SULFOLOBUS TOKODAII REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 63 926 2007 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 17642519 REMARK 1 DOI 10.1107/S0907444907026315 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0057 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 27770 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 920 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1514 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3372 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 305 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.33000 REMARK 3 B22 (A**2) : -1.71000 REMARK 3 B33 (A**2) : 1.55000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.67000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.171 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.310 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3556 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4805 ; 1.266 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 435 ; 5.184 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;35.106 ;24.368 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 687 ;13.633 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;13.494 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 522 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2664 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2077 ; 1.754 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3380 ; 2.977 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1479 ; 4.328 ; 7.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1411 ; 6.580 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2W11 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-OCT-08. REMARK 100 THE DEPOSITION ID IS D_1290036692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX10.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.729 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27770 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 23.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.480 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1QQ5 REMARK 200 REMARK 200 REMARK: THE CRYSTAL WAS TWINNED BY THE RETICULAR MEROHEDRY. THE REMARK 200 DATA WERE DETWINNED USING THE ORIGINAL ALGORITHM AS DESCRIBED IN REMARK 200 A SECONDARY REFERENCE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 20% PEG6000 PH7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.79450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.04100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.79450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.04100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2037 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2115 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO A -4 CD PRO A -4 N 0.126 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A -4 CA - N - CD ANGL. DEV. = -9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A -1 24.96 -61.10 REMARK 500 ILE A 8 -62.41 -109.54 REMARK 500 LEU A 73 134.27 -39.66 REMARK 500 PRO A 129 30.68 -91.75 REMARK 500 ILE A 175 137.73 -37.54 REMARK 500 ILE B 8 -63.31 -102.71 REMARK 500 PRO B 129 33.37 -93.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2OP A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2OP B 1202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2W43 RELATED DB: PDB REMARK 900 STRUCTURE OF L-HALOACID DEHALOGENASE FROM S. TOKODAII DBREF 2W11 A -4 0 PDB 2W11 2W11 -4 0 DBREF 2W11 A 1 201 UNP Q96XE7 Q96XE7_SULTO 1 201 DBREF 2W11 B -4 0 PDB 2W11 2W11 -4 0 DBREF 2W11 B 1 201 UNP Q96XE7 Q96XE7_SULTO 1 201 SEQRES 1 A 206 PRO ARG GLY SER HIS MET ILE ILE LEU ALA PHE ASP ILE SEQRES 2 A 206 PHE GLY THR VAL LEU ASP THR SER THR VAL ILE GLN GLU SEQRES 3 A 206 PHE ARG ASN LYS GLN LEU GLU TYR THR TRP LEU LEU THR SEQRES 4 A 206 ILE MET GLY LYS TYR VAL GLU PHE GLU GLU ILE THR LYS SEQRES 5 A 206 ILE THR LEU ARG TYR ILE LEU LYS VAL ARG GLY GLU GLU SEQRES 6 A 206 SER LYS PHE ASP GLU GLU LEU ASN LYS TRP LYS ASN LEU SEQRES 7 A 206 LYS ALA TYR GLU ASP THR LYS TYR LEU LYS GLU ILE SER SEQRES 8 A 206 GLU ILE ALA GLU VAL TYR ALA LEU SER ASN GLY SER ILE SEQRES 9 A 206 ASN GLU VAL LYS GLN HIS LEU GLU ARG ASN GLY LEU LEU SEQRES 10 A 206 ARG TYR PHE LYS GLY ILE PHE SER ALA GLU SER VAL LYS SEQRES 11 A 206 GLU TYR LYS PRO SER PRO LYS VAL TYR LYS TYR PHE LEU SEQRES 12 A 206 ASP SER ILE GLY ALA LYS GLU ALA PHE LEU VAL SER SER SEQRES 13 A 206 ASN ALA PHE ASP VAL ILE GLY ALA LYS ASN ALA GLY MET SEQRES 14 A 206 ARG SER ILE PHE VAL ASN ARG LYS ASN THR ILE VAL ASP SEQRES 15 A 206 PRO ILE GLY GLY LYS PRO ASP VAL ILE VAL ASN ASP PHE SEQRES 16 A 206 LYS GLU LEU TYR GLU TRP ILE LEU ARG TYR LYS SEQRES 1 B 206 PRO ARG GLY SER HIS MET ILE ILE LEU ALA PHE ASP ILE SEQRES 2 B 206 PHE GLY THR VAL LEU ASP THR SER THR VAL ILE GLN GLU SEQRES 3 B 206 PHE ARG ASN LYS GLN LEU GLU TYR THR TRP LEU LEU THR SEQRES 4 B 206 ILE MET GLY LYS TYR VAL GLU PHE GLU GLU ILE THR LYS SEQRES 5 B 206 ILE THR LEU ARG TYR ILE LEU LYS VAL ARG GLY GLU GLU SEQRES 6 B 206 SER LYS PHE ASP GLU GLU LEU ASN LYS TRP LYS ASN LEU SEQRES 7 B 206 LYS ALA TYR GLU ASP THR LYS TYR LEU LYS GLU ILE SER SEQRES 8 B 206 GLU ILE ALA GLU VAL TYR ALA LEU SER ASN GLY SER ILE SEQRES 9 B 206 ASN GLU VAL LYS GLN HIS LEU GLU ARG ASN GLY LEU LEU SEQRES 10 B 206 ARG TYR PHE LYS GLY ILE PHE SER ALA GLU SER VAL LYS SEQRES 11 B 206 GLU TYR LYS PRO SER PRO LYS VAL TYR LYS TYR PHE LEU SEQRES 12 B 206 ASP SER ILE GLY ALA LYS GLU ALA PHE LEU VAL SER SER SEQRES 13 B 206 ASN ALA PHE ASP VAL ILE GLY ALA LYS ASN ALA GLY MET SEQRES 14 B 206 ARG SER ILE PHE VAL ASN ARG LYS ASN THR ILE VAL ASP SEQRES 15 B 206 PRO ILE GLY GLY LYS PRO ASP VAL ILE VAL ASN ASP PHE SEQRES 16 B 206 LYS GLU LEU TYR GLU TRP ILE LEU ARG TYR LYS HET 2OP A1202 6 HET 2OP B1202 6 HETNAM 2OP (2S)-2-HYDROXYPROPANOIC ACID FORMUL 3 2OP 2(C3 H6 O3) FORMUL 5 HOH *305(H2 O) HELIX 1 1 ASP A 14 VAL A 18 5 5 HELIX 2 2 ILE A 19 GLY A 37 1 19 HELIX 3 3 GLU A 41 ARG A 57 1 17 HELIX 4 4 GLU A 59 SER A 61 5 3 HELIX 5 5 LYS A 62 ASN A 72 1 11 HELIX 6 6 TYR A 76 LYS A 80 5 5 HELIX 7 7 TYR A 81 ALA A 89 1 9 HELIX 8 8 SER A 98 ASN A 109 1 12 HELIX 9 9 LEU A 111 PHE A 115 5 5 HELIX 10 10 GLU A 122 LYS A 125 5 4 HELIX 11 11 SER A 130 GLY A 142 1 13 HELIX 12 12 ASN A 152 ALA A 162 1 11 HELIX 13 13 ASP A 177 GLY A 181 5 5 HELIX 14 14 ASP A 189 LYS A 201 1 13 HELIX 15 15 ILE B 19 GLY B 37 1 19 HELIX 16 16 GLU B 41 ARG B 57 1 17 HELIX 17 17 GLU B 59 SER B 61 5 3 HELIX 18 18 LYS B 62 ASN B 72 1 11 HELIX 19 19 TYR B 76 LYS B 80 5 5 HELIX 20 20 TYR B 81 ALA B 89 1 9 HELIX 21 21 SER B 98 ASN B 109 1 12 HELIX 22 22 LEU B 111 PHE B 115 5 5 HELIX 23 23 GLU B 122 LYS B 125 5 4 HELIX 24 24 SER B 130 GLY B 142 1 13 HELIX 25 25 ASN B 152 ALA B 162 1 11 HELIX 26 26 ASP B 177 GLY B 181 5 5 HELIX 27 27 ASP B 189 LYS B 201 1 13 SHEET 1 AA 6 GLY A 117 SER A 120 0 SHEET 2 AA 6 GLU A 90 SER A 95 1 O ALA A 93 N PHE A 119 SHEET 3 AA 6 ILE A 3 PHE A 6 1 O LEU A 4 N TYR A 92 SHEET 4 AA 6 PHE A 147 SER A 150 1 O PHE A 147 N ALA A 5 SHEET 5 AA 6 ARG A 165 VAL A 169 1 O ARG A 165 N LEU A 148 SHEET 6 AA 6 VAL A 185 VAL A 187 1 O VAL A 185 N PHE A 168 SHEET 1 BA 6 GLY B 117 SER B 120 0 SHEET 2 BA 6 GLU B 90 SER B 95 1 O ALA B 93 N PHE B 119 SHEET 3 BA 6 ILE B 3 PHE B 6 1 O LEU B 4 N TYR B 92 SHEET 4 BA 6 PHE B 147 SER B 150 1 O PHE B 147 N ALA B 5 SHEET 5 BA 6 ARG B 165 VAL B 169 1 O ARG B 165 N LEU B 148 SHEET 6 BA 6 VAL B 185 VAL B 187 1 O VAL B 185 N PHE B 168 CISPEP 1 LYS A 128 PRO A 129 0 2.43 CISPEP 2 LYS B 128 PRO B 129 0 3.05 SITE 1 AC1 8 ASP A 7 ILE A 8 PHE A 9 ARG A 23 SITE 2 AC1 8 SER A 95 ASN A 96 LYS A 128 ASN A 152 SITE 1 AC2 8 ASP B 7 ILE B 8 PHE B 9 ARG B 23 SITE 2 AC2 8 SER B 95 ASN B 96 LYS B 128 ASN B 152 CRYST1 127.589 58.082 51.192 90.00 97.23 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007838 0.000000 0.000994 0.00000 SCALE2 0.000000 0.017217 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019691 0.00000 MTRIX1 1 0.999990 -0.001550 -0.003400 -0.04745 1 MTRIX2 1 -0.001550 -1.000000 0.001250 -17.67800 1 MTRIX3 1 -0.003400 -0.001240 -0.999990 0.14365 1