HEADER SIGNALING PROTEIN 04-NOV-08 2W2V TITLE RAC2 (G12V) IN COMPLEX WITH GTPGS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 1-177; COMPND 5 SYNONYM: RAC2, P21-RAC2, SMALL G PROTEIN, GX; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS ADP-RIBOSYLATION, CYTOPLASM, DISEASE MUTATION, GTP-BINDING, KEYWDS 2 LIPOPROTEIN, METHYLATION, NUCLEOTIDE-BINDING, POLYMORPHISM, KEYWDS 3 PRENYLATION, SIGNALING PROTEIN, PHOSPHOLIPASE C, PHOSPHOINOSITIDES, KEYWDS 4 RHO EXPDTA X-RAY DIFFRACTION AUTHOR O.OPALEYE,T.D.BUNNEY,S.M.ROE,L.H.PEARL REVDAT 2 15-MAY-19 2W2V 1 REMARK REVDAT 1 05-MAY-09 2W2V 0 JRNL AUTH T.D.BUNNEY,O.OPALEYE,S.M.ROE,P.VATTER,R.W.BAXENDALE, JRNL AUTH 2 C.WALLISER,K.L.EVERETT,M.B.JOSEPHS,C.CHRISTOW, JRNL AUTH 3 F.RODRIGUES-LIMA,P.GIERSCHIK,L.H.PEARL,M.KATAN JRNL TITL STRUCTURAL INSIGHTS INTO FORMATION OF AN ACTIVE SIGNALING JRNL TITL 2 COMPLEX BETWEEN RAC AND PHOSPHOLIPASE C GAMMA 2. JRNL REF MOL.CELL V. 34 223 2009 JRNL REFN ISSN 1097-2765 JRNL PMID 19394299 JRNL DOI 10.1016/J.MOLCEL.2009.02.023 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.120 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.9 REMARK 3 NUMBER OF REFLECTIONS : 92859 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.283 REMARK 3 R VALUE (WORKING SET) : 0.280 REMARK 3 FREE R VALUE : 0.345 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 4720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.6375 - 6.2114 0.87 3118 152 0.2259 0.2898 REMARK 3 2 6.2114 - 4.9313 0.89 3162 163 0.2313 0.2786 REMARK 3 3 4.9313 - 4.3082 0.88 3092 205 0.1991 0.2707 REMARK 3 4 4.3082 - 3.9144 0.88 3147 166 0.2286 0.2524 REMARK 3 5 3.9144 - 3.6339 0.89 3144 146 0.2314 0.3147 REMARK 3 6 3.6339 - 3.4197 0.87 3103 179 0.2418 0.2808 REMARK 3 7 3.4197 - 3.2485 0.87 2988 180 0.2402 0.2958 REMARK 3 8 3.2485 - 3.1071 0.88 3181 180 0.2530 0.3488 REMARK 3 9 3.1071 - 2.9875 0.87 3066 158 0.2762 0.3640 REMARK 3 10 2.9875 - 2.8844 0.86 3049 182 0.2943 0.4080 REMARK 3 11 2.8844 - 2.7942 0.86 3036 148 0.3019 0.3906 REMARK 3 12 2.7942 - 2.7144 0.85 3046 139 0.3059 0.3631 REMARK 3 13 2.7144 - 2.6429 0.84 2898 163 0.2986 0.3911 REMARK 3 14 2.6429 - 2.5784 0.84 3066 121 0.3307 0.4088 REMARK 3 15 2.5784 - 2.5198 0.83 2901 165 0.3086 0.3563 REMARK 3 16 2.5198 - 2.4662 0.81 2884 150 0.2884 0.3707 REMARK 3 17 2.4662 - 2.4169 0.82 2939 163 0.2837 0.3081 REMARK 3 18 2.4169 - 2.3712 0.81 2843 155 0.2941 0.3734 REMARK 3 19 2.3712 - 2.3289 0.80 2766 179 0.3037 0.4049 REMARK 3 20 2.3289 - 2.2894 0.81 2943 155 0.3177 0.3522 REMARK 3 21 2.2894 - 2.2525 0.80 2804 125 0.3244 0.3750 REMARK 3 22 2.2525 - 2.2178 0.78 2752 153 0.3602 0.4475 REMARK 3 23 2.2178 - 2.1852 0.80 2837 156 0.3282 0.4115 REMARK 3 24 2.1852 - 2.1544 0.79 2837 142 0.3384 0.3706 REMARK 3 25 2.1544 - 2.1253 0.79 2771 135 0.3619 0.4093 REMARK 3 26 2.1253 - 2.0977 0.79 2757 157 0.3718 0.4401 REMARK 3 27 2.0977 - 2.0715 0.78 2819 162 0.3819 0.4484 REMARK 3 28 2.0715 - 2.0465 0.79 2794 162 0.3996 0.4714 REMARK 3 29 2.0465 - 2.0227 0.79 2751 141 0.4161 0.4833 REMARK 3 30 2.0227 - 2.0000 0.74 2645 138 0.3968 0.4149 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 50.57 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 40.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.97820 REMARK 3 B22 (A**2) : 23.04590 REMARK 3 B33 (A**2) : -14.06770 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.73930 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5442 REMARK 3 ANGLE : 0.641 7478 REMARK 3 CHIRALITY : 0.042 894 REMARK 3 PLANARITY : 0.003 921 REMARK 3 DIHEDRAL : 18.544 1907 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: DATA INITIALLY THOUGHT TO BE P212121, REMARK 3 LATER FOUND TO BE P21 WITH B AS 90, ALSO TWINNED. REMARK 4 REMARK 4 2W2V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-NOV-08. REMARK 100 THE DEPOSITION ID IS D_1290038027. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79004 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 54.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: IN HOUSE RAC2 STRUCTURE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RAC2(2-177)GTPGS WAS CRYSTALLIZED REMARK 280 USING A PROTEIN CONCENTRATION OF 25 MG/ML WITH PRECIPITANT (18% REMARK 280 PEG3350, 300 MM SODIUM/POTASSIUM TARTRATE) AND AT A CONSTANT REMARK 280 TEMPERATURE OF 20C, PH 7, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.26450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLY 12 TO VAL REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLY 12 TO VAL REMARK 400 ENGINEERED RESIDUE IN CHAIN C, GLY 12 TO VAL REMARK 400 ENGINEERED RESIDUE IN CHAIN D, GLY 12 TO VAL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -6 REMARK 465 GLY A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 GLY A 30 REMARK 465 GLU A 31 REMARK 465 TYR A 32 REMARK 465 ASP A 47 REMARK 465 SER A 48 REMARK 465 LYS A 49 REMARK 465 GLY B -6 REMARK 465 GLY B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 GLY B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 31 REMARK 465 TYR B 32 REMARK 465 LYS B 130 REMARK 465 GLU B 131 REMARK 465 LYS B 132 REMARK 465 LEU B 177 REMARK 465 GLY C -6 REMARK 465 GLY C -5 REMARK 465 GLY C -4 REMARK 465 SER C -3 REMARK 465 GLY C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 GLY C 30 REMARK 465 GLU C 31 REMARK 465 TYR C 32 REMARK 465 ASP C 47 REMARK 465 SER C 48 REMARK 465 LYS C 49 REMARK 465 PRO C 50 REMARK 465 GLU C 127 REMARK 465 LYS C 128 REMARK 465 LEU C 129 REMARK 465 LYS C 130 REMARK 465 GLU C 131 REMARK 465 LYS C 132 REMARK 465 LYS C 133 REMARK 465 LEU C 134 REMARK 465 LEU C 177 REMARK 465 GLY D -6 REMARK 465 GLY D -5 REMARK 465 GLY D -4 REMARK 465 SER D -3 REMARK 465 GLY D -2 REMARK 465 GLY D -1 REMARK 465 SER D 0 REMARK 465 ASP D 47 REMARK 465 SER D 48 REMARK 465 LYS D 49 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 45 CG SD CE REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 ASP A 124 CG OD1 OD2 REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 LYS A 147 CG CD CE NZ REMARK 470 LYS A 166 CG CD CE NZ REMARK 470 GLN B 2 CG CD OE1 NE2 REMARK 470 MET B 45 CG SD CE REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 TRP B 56 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 56 CZ3 CH2 REMARK 470 GLN B 74 CG CD OE1 NE2 REMARK 470 ASP B 121 CG OD1 OD2 REMARK 470 LYS B 123 CG CD CE NZ REMARK 470 ASP B 124 CG OD1 OD2 REMARK 470 GLU B 127 CG CD OE1 OE2 REMARK 470 LYS B 128 CG CD CE NZ REMARK 470 LYS B 133 CG CD CE NZ REMARK 470 LYS B 147 CG CD CE NZ REMARK 470 CYS B 157 SG REMARK 470 ARG B 163 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 166 CG CD CE NZ REMARK 470 GLU C 91 CG CD OE1 OE2 REMARK 470 LYS C 123 CG CD CE NZ REMARK 470 ASP C 124 CG OD1 OD2 REMARK 470 ARG D 66 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 123 CG CD CE NZ REMARK 470 GLU D 127 CG CD OE1 OE2 REMARK 470 LYS D 128 CG CD CE NZ REMARK 470 LYS D 130 CG CD CE NZ REMARK 470 LYS D 133 CG CD CE NZ REMARK 470 LYS D 166 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 13 8.99 86.54 REMARK 500 PRO A 69 -3.33 -58.90 REMARK 500 LYS A 96 -61.86 -134.99 REMARK 500 ASP B 11 154.47 -49.11 REMARK 500 ASP B 47 -125.53 59.92 REMARK 500 LYS B 96 -57.08 -136.01 REMARK 500 PRO C 69 -8.85 -59.58 REMARK 500 LYS C 96 -61.60 -135.58 REMARK 500 SER C 107 -61.93 -94.30 REMARK 500 THR C 108 134.91 -30.60 REMARK 500 LYS C 153 145.57 -170.66 REMARK 500 ALA D 13 23.48 85.72 REMARK 500 PRO D 29 -71.74 -58.10 REMARK 500 GLU D 31 -80.67 -49.08 REMARK 500 LYS D 96 -59.11 -141.65 REMARK 500 SER D 151 -179.24 -62.01 REMARK 500 GLN D 162 5.09 81.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2009 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B2028 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH C2001 DISTANCE = 10.03 ANGSTROMS REMARK 525 HOH C2007 DISTANCE = 7.90 ANGSTROMS REMARK 525 HOH C2011 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH C2016 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH C2019 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH C2059 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH D2028 DISTANCE = 5.87 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP C 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTP D 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2W2T RELATED DB: PDB REMARK 900 RAC2 (G12V) IN COMPLEX WITH GDP REMARK 900 RELATED ID: 1DS6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A RAC-RHOGDI COMPLEX REMARK 900 RELATED ID: 2W2X RELATED DB: PDB REMARK 900 COMPLEX OF RAC2 AND PLCG2 SPPH DOMAIN REMARK 900 RELATED ID: 2W2W RELATED DB: PDB REMARK 900 PLCG2 SPLIT PLECKSTRIN HOMOLOGY (PH) DOMAIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THERE IS TAG LINKER SEQUENCE, GGGSGGS (NOT SEEN) AND A REMARK 999 MUTATION G12V DBREF 2W2V A -6 0 PDB 2W2V 2W2V -6 0 DBREF 2W2V A 1 177 UNP P15153 RAC2_HUMAN 1 177 DBREF 2W2V B -6 0 PDB 2W2V 2W2V -6 0 DBREF 2W2V B 1 177 UNP P15153 RAC2_HUMAN 1 177 DBREF 2W2V C -6 0 PDB 2W2V 2W2V -6 0 DBREF 2W2V C 1 177 UNP P15153 RAC2_HUMAN 1 177 DBREF 2W2V D -6 0 PDB 2W2V 2W2V -6 0 DBREF 2W2V D 1 177 UNP P15153 RAC2_HUMAN 1 177 SEQADV 2W2V VAL A 12 UNP P15153 GLY 12 ENGINEERED MUTATION SEQADV 2W2V VAL B 12 UNP P15153 GLY 12 ENGINEERED MUTATION SEQADV 2W2V VAL C 12 UNP P15153 GLY 12 ENGINEERED MUTATION SEQADV 2W2V VAL D 12 UNP P15153 GLY 12 ENGINEERED MUTATION SEQRES 1 A 184 GLY GLY GLY SER GLY GLY SER MET GLN ALA ILE LYS CYS SEQRES 2 A 184 VAL VAL VAL GLY ASP VAL ALA VAL GLY LYS THR CYS LEU SEQRES 3 A 184 LEU ILE SER TYR THR THR ASN ALA PHE PRO GLY GLU TYR SEQRES 4 A 184 ILE PRO THR VAL PHE ASP ASN TYR SER ALA ASN VAL MET SEQRES 5 A 184 VAL ASP SER LYS PRO VAL ASN LEU GLY LEU TRP ASP THR SEQRES 6 A 184 ALA GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO LEU SER SEQRES 7 A 184 TYR PRO GLN THR ASP VAL PHE LEU ILE CYS PHE SER LEU SEQRES 8 A 184 VAL SER PRO ALA SER TYR GLU ASN VAL ARG ALA LYS TRP SEQRES 9 A 184 PHE PRO GLU VAL ARG HIS HIS CYS PRO SER THR PRO ILE SEQRES 10 A 184 ILE LEU VAL GLY THR LYS LEU ASP LEU ARG ASP ASP LYS SEQRES 11 A 184 ASP THR ILE GLU LYS LEU LYS GLU LYS LYS LEU ALA PRO SEQRES 12 A 184 ILE THR TYR PRO GLN GLY LEU ALA LEU ALA LYS GLU ILE SEQRES 13 A 184 ASP SER VAL LYS TYR LEU GLU CYS SER ALA LEU THR GLN SEQRES 14 A 184 ARG GLY LEU LYS THR VAL PHE ASP GLU ALA ILE ARG ALA SEQRES 15 A 184 VAL LEU SEQRES 1 B 184 GLY GLY GLY SER GLY GLY SER MET GLN ALA ILE LYS CYS SEQRES 2 B 184 VAL VAL VAL GLY ASP VAL ALA VAL GLY LYS THR CYS LEU SEQRES 3 B 184 LEU ILE SER TYR THR THR ASN ALA PHE PRO GLY GLU TYR SEQRES 4 B 184 ILE PRO THR VAL PHE ASP ASN TYR SER ALA ASN VAL MET SEQRES 5 B 184 VAL ASP SER LYS PRO VAL ASN LEU GLY LEU TRP ASP THR SEQRES 6 B 184 ALA GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO LEU SER SEQRES 7 B 184 TYR PRO GLN THR ASP VAL PHE LEU ILE CYS PHE SER LEU SEQRES 8 B 184 VAL SER PRO ALA SER TYR GLU ASN VAL ARG ALA LYS TRP SEQRES 9 B 184 PHE PRO GLU VAL ARG HIS HIS CYS PRO SER THR PRO ILE SEQRES 10 B 184 ILE LEU VAL GLY THR LYS LEU ASP LEU ARG ASP ASP LYS SEQRES 11 B 184 ASP THR ILE GLU LYS LEU LYS GLU LYS LYS LEU ALA PRO SEQRES 12 B 184 ILE THR TYR PRO GLN GLY LEU ALA LEU ALA LYS GLU ILE SEQRES 13 B 184 ASP SER VAL LYS TYR LEU GLU CYS SER ALA LEU THR GLN SEQRES 14 B 184 ARG GLY LEU LYS THR VAL PHE ASP GLU ALA ILE ARG ALA SEQRES 15 B 184 VAL LEU SEQRES 1 C 184 GLY GLY GLY SER GLY GLY SER MET GLN ALA ILE LYS CYS SEQRES 2 C 184 VAL VAL VAL GLY ASP VAL ALA VAL GLY LYS THR CYS LEU SEQRES 3 C 184 LEU ILE SER TYR THR THR ASN ALA PHE PRO GLY GLU TYR SEQRES 4 C 184 ILE PRO THR VAL PHE ASP ASN TYR SER ALA ASN VAL MET SEQRES 5 C 184 VAL ASP SER LYS PRO VAL ASN LEU GLY LEU TRP ASP THR SEQRES 6 C 184 ALA GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO LEU SER SEQRES 7 C 184 TYR PRO GLN THR ASP VAL PHE LEU ILE CYS PHE SER LEU SEQRES 8 C 184 VAL SER PRO ALA SER TYR GLU ASN VAL ARG ALA LYS TRP SEQRES 9 C 184 PHE PRO GLU VAL ARG HIS HIS CYS PRO SER THR PRO ILE SEQRES 10 C 184 ILE LEU VAL GLY THR LYS LEU ASP LEU ARG ASP ASP LYS SEQRES 11 C 184 ASP THR ILE GLU LYS LEU LYS GLU LYS LYS LEU ALA PRO SEQRES 12 C 184 ILE THR TYR PRO GLN GLY LEU ALA LEU ALA LYS GLU ILE SEQRES 13 C 184 ASP SER VAL LYS TYR LEU GLU CYS SER ALA LEU THR GLN SEQRES 14 C 184 ARG GLY LEU LYS THR VAL PHE ASP GLU ALA ILE ARG ALA SEQRES 15 C 184 VAL LEU SEQRES 1 D 184 GLY GLY GLY SER GLY GLY SER MET GLN ALA ILE LYS CYS SEQRES 2 D 184 VAL VAL VAL GLY ASP VAL ALA VAL GLY LYS THR CYS LEU SEQRES 3 D 184 LEU ILE SER TYR THR THR ASN ALA PHE PRO GLY GLU TYR SEQRES 4 D 184 ILE PRO THR VAL PHE ASP ASN TYR SER ALA ASN VAL MET SEQRES 5 D 184 VAL ASP SER LYS PRO VAL ASN LEU GLY LEU TRP ASP THR SEQRES 6 D 184 ALA GLY GLN GLU ASP TYR ASP ARG LEU ARG PRO LEU SER SEQRES 7 D 184 TYR PRO GLN THR ASP VAL PHE LEU ILE CYS PHE SER LEU SEQRES 8 D 184 VAL SER PRO ALA SER TYR GLU ASN VAL ARG ALA LYS TRP SEQRES 9 D 184 PHE PRO GLU VAL ARG HIS HIS CYS PRO SER THR PRO ILE SEQRES 10 D 184 ILE LEU VAL GLY THR LYS LEU ASP LEU ARG ASP ASP LYS SEQRES 11 D 184 ASP THR ILE GLU LYS LEU LYS GLU LYS LYS LEU ALA PRO SEQRES 12 D 184 ILE THR TYR PRO GLN GLY LEU ALA LEU ALA LYS GLU ILE SEQRES 13 D 184 ASP SER VAL LYS TYR LEU GLU CYS SER ALA LEU THR GLN SEQRES 14 D 184 ARG GLY LEU LYS THR VAL PHE ASP GLU ALA ILE ARG ALA SEQRES 15 D 184 VAL LEU HET GTP A 500 32 HET GTP B 500 32 HET GTP C 500 32 HET GTP D 500 32 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE FORMUL 5 GTP 4(C10 H16 N5 O14 P3) FORMUL 9 HOH *527(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 GLN A 61 ASP A 65 5 5 HELIX 3 3 LEU A 67 TYR A 72 5 6 HELIX 4 4 SER A 86 LYS A 96 1 11 HELIX 5 5 LYS A 96 CYS A 105 1 10 HELIX 6 6 LYS A 116 ARG A 120 5 5 HELIX 7 7 ASP A 122 GLU A 131 1 10 HELIX 8 8 THR A 138 ILE A 149 1 12 HELIX 9 9 GLY A 164 ALA A 175 1 12 HELIX 10 10 GLY B 15 ASN B 26 1 12 HELIX 11 11 GLN B 61 ASP B 65 5 5 HELIX 12 12 LEU B 67 TYR B 72 5 6 HELIX 13 13 SER B 86 LYS B 96 1 11 HELIX 14 14 LYS B 96 CYS B 105 1 10 HELIX 15 15 LYS B 116 ASP B 121 1 6 HELIX 16 16 ASP B 122 LEU B 129 1 8 HELIX 17 17 THR B 138 ILE B 149 1 12 HELIX 18 18 GLY B 164 ALA B 175 1 12 HELIX 19 19 GLY C 15 ASN C 26 1 12 HELIX 20 20 GLN C 61 ASP C 65 5 5 HELIX 21 21 LEU C 67 TYR C 72 5 6 HELIX 22 22 SER C 86 LYS C 96 1 11 HELIX 23 23 LYS C 96 CYS C 105 1 10 HELIX 24 24 LYS C 116 ARG C 120 5 5 HELIX 25 25 THR C 138 ILE C 149 1 12 HELIX 26 26 GLY C 164 ALA C 175 1 12 HELIX 27 27 GLY D 15 ASN D 26 1 12 HELIX 28 28 GLN D 61 ASP D 65 5 5 HELIX 29 29 LEU D 67 TYR D 72 5 6 HELIX 30 30 SER D 86 LYS D 96 1 11 HELIX 31 31 LYS D 96 CYS D 105 1 10 HELIX 32 32 LYS D 116 ARG D 120 5 5 HELIX 33 33 ASP D 122 LYS D 130 1 9 HELIX 34 34 GLU D 131 LYS D 133 5 3 HELIX 35 35 THR D 138 ILE D 149 1 12 HELIX 36 36 GLY D 164 ALA D 175 1 12 SHEET 1 AA 6 ASN A 39 VAL A 44 0 SHEET 2 AA 6 VAL A 51 TRP A 56 -1 O VAL A 51 N VAL A 44 SHEET 3 AA 6 GLN A 2 VAL A 9 1 O GLN A 2 N ASN A 52 SHEET 4 AA 6 VAL A 77 SER A 83 1 O VAL A 77 N VAL A 7 SHEET 5 AA 6 ILE A 110 THR A 115 1 O ILE A 111 N ILE A 80 SHEET 6 AA 6 LYS A 153 GLU A 156 1 O LYS A 153 N LEU A 112 SHEET 1 BA 6 ASN B 39 VAL B 46 0 SHEET 2 BA 6 LYS B 49 TRP B 56 -1 O LYS B 49 N VAL B 46 SHEET 3 BA 6 ALA B 3 VAL B 9 1 O ILE B 4 N GLY B 54 SHEET 4 BA 6 VAL B 77 SER B 83 1 O VAL B 77 N VAL B 7 SHEET 5 BA 6 ILE B 110 THR B 115 1 O ILE B 111 N ILE B 80 SHEET 6 BA 6 LYS B 153 GLU B 156 1 O LYS B 153 N LEU B 112 SHEET 1 CA 6 ASN C 39 ASN C 43 0 SHEET 2 CA 6 ASN C 52 TRP C 56 -1 O LEU C 53 N ALA C 42 SHEET 3 CA 6 ALA C 3 GLY C 10 1 O ILE C 4 N GLY C 54 SHEET 4 CA 6 VAL C 77 SER C 83 1 O VAL C 77 N VAL C 7 SHEET 5 CA 6 ILE C 110 THR C 115 1 O ILE C 111 N ILE C 80 SHEET 6 CA 6 LYS C 153 GLU C 156 1 O LYS C 153 N LEU C 112 SHEET 1 DA 6 ASN D 39 VAL D 44 0 SHEET 2 DA 6 VAL D 51 TRP D 56 -1 O VAL D 51 N VAL D 44 SHEET 3 DA 6 GLN D 2 GLY D 10 1 O GLN D 2 N ASN D 52 SHEET 4 DA 6 VAL D 77 SER D 83 1 O VAL D 77 N VAL D 7 SHEET 5 DA 6 ILE D 110 THR D 115 1 O ILE D 111 N ILE D 80 SHEET 6 DA 6 LYS D 153 GLU D 156 1 O LYS D 153 N LEU D 112 SITE 1 AC1 23 ASP A 11 VAL A 12 ALA A 13 VAL A 14 SITE 2 AC1 23 GLY A 15 LYS A 16 THR A 17 CYS A 18 SITE 3 AC1 23 ILE A 33 ASP A 57 LYS A 116 ASP A 118 SITE 4 AC1 23 LEU A 119 SER A 158 ALA A 159 LEU A 160 SITE 5 AC1 23 HOH A2031 HOH A2155 HOH A2156 HOH A2157 SITE 6 AC1 23 HOH A2158 HOH A2159 HOH A2160 SITE 1 AC2 23 ASP B 11 ALA B 13 VAL B 14 GLY B 15 SITE 2 AC2 23 LYS B 16 THR B 17 CYS B 18 PHE B 28 SITE 3 AC2 23 ILE B 33 ASP B 57 THR B 58 LYS B 116 SITE 4 AC2 23 ASP B 118 SER B 158 ALA B 159 LEU B 160 SITE 5 AC2 23 HOH B2017 HOH B2055 HOH B2127 HOH B2128 SITE 6 AC2 23 HOH B2129 HOH B2130 HOH B2131 SITE 1 AC3 24 ASP C 11 VAL C 12 ALA C 13 VAL C 14 SITE 2 AC3 24 GLY C 15 LYS C 16 THR C 17 CYS C 18 SITE 3 AC3 24 ILE C 33 ASP C 57 THR C 58 LYS C 116 SITE 4 AC3 24 ASP C 118 LEU C 119 SER C 158 ALA C 159 SITE 5 AC3 24 LEU C 160 HOH C2018 HOH C2048 HOH C2050 SITE 6 AC3 24 HOH C2117 HOH C2118 HOH C2119 HOH C2120 SITE 1 AC4 22 ASP D 11 ALA D 13 VAL D 14 GLY D 15 SITE 2 AC4 22 LYS D 16 THR D 17 CYS D 18 ILE D 33 SITE 3 AC4 22 ASP D 57 THR D 58 LYS D 116 ASP D 118 SITE 4 AC4 22 LEU D 119 SER D 158 ALA D 159 LEU D 160 SITE 5 AC4 22 HOH D2012 HOH D2110 HOH D2111 HOH D2112 SITE 6 AC4 22 HOH D2113 HOH D2114 CRYST1 42.202 94.529 107.237 90.00 89.99 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023696 0.000000 -0.000004 0.00000 SCALE2 0.000000 0.010579 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009325 0.00000