HEADER PROTEIN TRANSPORT 23-DEC-08 2W7Q TITLE STRUCTURE OF PSEUDOMONAS AERUGINOSA LOLA COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER-MEMBRANE LIPOPROTEIN CARRIER PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PSEUDOMONAS AERUGINOSA LOLA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1 KEYWDS PERIPLASMIC CHAPERONE, LIPOPROTEIN TRANSPORT, TRANSPORT, CHAPERONE, KEYWDS 2 PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR K.REMANS,K.PAUWELS,P.VAN ULSEN,S.SAVVIDES,K.DECANNIERE,P.CORNELIS, AUTHOR 2 J.TOMMASSEN,P.VAN GELDER REVDAT 5 13-DEC-23 2W7Q 1 REMARK REVDAT 4 24-JUL-19 2W7Q 1 REMARK REVDAT 3 28-SEP-11 2W7Q 1 JRNL HETSYN REVDAT 2 13-JUL-11 2W7Q 1 VERSN REVDAT 1 29-DEC-09 2W7Q 0 JRNL AUTH K.REMANS,K.PAUWELS,P.VAN ULSEN,L.BUTS,P.CORNELIS, JRNL AUTH 2 J.TOMMASSEN,S.SAVVIDES,K.DECANNIERE,P.VAN GELDER JRNL TITL HYDROPHOBIC SURFACE PATCHES ON LOLA OF PSEUDOMONAS JRNL TITL 2 AERUGINOSA ARE ESSENTIAL FOR LIPOPROTEIN BINDING. JRNL REF J.MOL.BIOL. V. 401 921 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20620146 JRNL DOI 10.1016/J.JMB.2010.06.067 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 26017 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1380 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.93 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1645 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2230 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2886 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 148 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 28.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.35000 REMARK 3 B22 (A**2) : -1.88000 REMARK 3 B33 (A**2) : 0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.71000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.187 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.171 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.238 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3028 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4120 ; 2.045 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 394 ; 6.872 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 144 ;40.050 ;24.722 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 533 ;17.567 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;19.065 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 482 ; 0.149 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2291 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1396 ; 0.243 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2047 ; 0.315 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 167 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 61 ; 0.181 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.156 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1953 ; 1.291 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3053 ; 2.006 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1206 ; 3.138 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1054 ; 4.878 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 9 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 35 A 45 5 REMARK 3 1 B 35 B 45 5 REMARK 3 2 A 51 A 61 5 REMARK 3 2 B 51 B 61 5 REMARK 3 3 A 68 A 80 5 REMARK 3 3 B 68 B 80 5 REMARK 3 4 A 88 A 90 5 REMARK 3 4 B 88 B 90 5 REMARK 3 5 A 126 A 129 5 REMARK 3 5 B 126 B 129 5 REMARK 3 6 A 136 A 138 5 REMARK 3 6 B 136 B 138 5 REMARK 3 7 A 150 A 155 5 REMARK 3 7 B 150 B 155 5 REMARK 3 8 A 161 A 164 5 REMARK 3 8 B 161 B 164 5 REMARK 3 9 A 174 A 178 5 REMARK 3 9 B 174 B 178 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 237 ; 0.20 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 253 ; 0.65 ; 15.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 237 ; 1.46 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 253 ; 2.45 ; 25.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 67 REMARK 3 ORIGIN FOR THE GROUP (A): 0.4574 5.7619 4.6178 REMARK 3 T TENSOR REMARK 3 T11: 0.1519 T22: 0.0855 REMARK 3 T33: 0.1258 T12: 0.0504 REMARK 3 T13: -0.0528 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.9940 L22: 1.2345 REMARK 3 L33: 1.5066 L12: 1.0931 REMARK 3 L13: 0.1483 L23: 0.3825 REMARK 3 S TENSOR REMARK 3 S11: -0.0837 S12: 0.0710 S13: 0.1227 REMARK 3 S21: -0.3780 S22: -0.0193 S23: 0.1910 REMARK 3 S31: -0.0240 S32: 0.0064 S33: 0.1030 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): 7.6708 -0.7349 -3.0032 REMARK 3 T TENSOR REMARK 3 T11: 0.0776 T22: 0.1275 REMARK 3 T33: 0.0847 T12: 0.0156 REMARK 3 T13: -0.0037 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.4585 L22: 1.9262 REMARK 3 L33: 2.4496 L12: -1.4043 REMARK 3 L13: -0.1101 L23: 1.6082 REMARK 3 S TENSOR REMARK 3 S11: -0.0789 S12: 0.0941 S13: -0.1789 REMARK 3 S21: -0.1337 S22: -0.0254 S23: 0.2513 REMARK 3 S31: -0.0150 S32: -0.0379 S33: 0.1043 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 182 REMARK 3 ORIGIN FOR THE GROUP (A): -4.5815 4.5608 8.0369 REMARK 3 T TENSOR REMARK 3 T11: 0.0509 T22: 0.0887 REMARK 3 T33: 0.1561 T12: 0.0366 REMARK 3 T13: -0.0383 T23: -0.0493 REMARK 3 L TENSOR REMARK 3 L11: 5.2632 L22: 1.5029 REMARK 3 L33: 2.2855 L12: 1.8723 REMARK 3 L13: 1.9142 L23: 1.0063 REMARK 3 S TENSOR REMARK 3 S11: -0.0384 S12: -0.0302 S13: 0.1949 REMARK 3 S21: -0.1684 S22: -0.0881 S23: 0.3691 REMARK 3 S31: 0.0522 S32: -0.0808 S33: 0.1265 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 183 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8518 2.8207 -7.2697 REMARK 3 T TENSOR REMARK 3 T11: 0.0795 T22: 0.2108 REMARK 3 T33: 0.0374 T12: 0.0021 REMARK 3 T13: 0.0790 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 1.8611 L22: 3.0387 REMARK 3 L33: 2.8321 L12: -2.3769 REMARK 3 L13: -0.8602 L23: 1.1844 REMARK 3 S TENSOR REMARK 3 S11: 0.0367 S12: -0.0877 S13: 0.1965 REMARK 3 S21: -0.1346 S22: 0.2395 S23: -0.1938 REMARK 3 S31: -0.2797 S32: 0.2573 S33: -0.2763 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 20 B 75 REMARK 3 ORIGIN FOR THE GROUP (A): 12.2058 -4.0494 36.1171 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.1081 REMARK 3 T33: 0.0746 T12: 0.0272 REMARK 3 T13: 0.0689 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 3.3858 L22: 2.6628 REMARK 3 L33: 3.2655 L12: -1.9641 REMARK 3 L13: -0.0772 L23: -0.3200 REMARK 3 S TENSOR REMARK 3 S11: 0.5306 S12: 0.2122 S13: 0.0261 REMARK 3 S21: -0.6924 S22: -0.3273 S23: -0.0632 REMARK 3 S31: -0.0629 S32: -0.0729 S33: -0.2034 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 76 B 101 REMARK 3 ORIGIN FOR THE GROUP (A): 7.9291 4.1788 24.8841 REMARK 3 T TENSOR REMARK 3 T11: 0.1038 T22: 0.1762 REMARK 3 T33: 0.0103 T12: 0.0812 REMARK 3 T13: 0.0434 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 7.5074 L22: 5.5353 REMARK 3 L33: 13.3747 L12: 1.1296 REMARK 3 L13: -1.0660 L23: -5.3142 REMARK 3 S TENSOR REMARK 3 S11: -0.0965 S12: 0.0366 S13: 0.1082 REMARK 3 S21: 0.1161 S22: 0.2905 S23: -0.1918 REMARK 3 S31: 0.0759 S32: 0.3023 S33: -0.1941 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 102 B 183 REMARK 3 ORIGIN FOR THE GROUP (A): 20.3873 -4.0012 38.1808 REMARK 3 T TENSOR REMARK 3 T11: 0.1169 T22: 0.1226 REMARK 3 T33: 0.0986 T12: 0.0226 REMARK 3 T13: 0.1211 T23: 0.0656 REMARK 3 L TENSOR REMARK 3 L11: 3.9243 L22: 4.6748 REMARK 3 L33: 2.1865 L12: -2.7547 REMARK 3 L13: 0.8649 L23: -1.4181 REMARK 3 S TENSOR REMARK 3 S11: 0.2990 S12: 0.3310 S13: 0.4021 REMARK 3 S21: -0.5868 S22: -0.4262 S23: -0.6632 REMARK 3 S31: 0.0877 S32: 0.2560 S33: 0.1273 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 184 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0430 -1.0991 22.0657 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.1263 REMARK 3 T33: 0.1383 T12: 0.0966 REMARK 3 T13: -0.0647 T23: -0.0766 REMARK 3 L TENSOR REMARK 3 L11: 1.3539 L22: 7.8921 REMARK 3 L33: 5.1455 L12: -3.2681 REMARK 3 L13: 1.3738 L23: -3.2009 REMARK 3 S TENSOR REMARK 3 S11: 0.2939 S12: 0.1274 S13: -0.0795 REMARK 3 S21: 0.3086 S22: 0.2888 S23: 0.7887 REMARK 3 S31: 0.3291 S32: 0.2812 S33: -0.5828 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2W7Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1290038456. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8080 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27714 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 90.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1UA8 REMARK 200 REMARK 200 REMARK: CHAINSAW MODEL OF 1UA8 WAS USED FOR MOLECULAR REPLACEMENT REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5 30% PEG4000 0.2 M REMARK 280 LI2SO4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.21950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLU A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 LEU A 9 REMARK 465 VAL A 10 REMARK 465 PRO A 11 REMARK 465 ARG A 12 REMARK 465 ALA B 1 REMARK 465 GLU B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 LEU B 9 REMARK 465 VAL B 10 REMARK 465 PRO B 11 REMARK 465 ARG B 12 REMARK 465 GLY B 13 REMARK 465 SER B 14 REMARK 465 ILE B 15 REMARK 465 ALA B 16 REMARK 465 ILE B 17 REMARK 465 ASP B 18 REMARK 465 ASP B 19 REMARK 465 GLY B 83 REMARK 465 THR B 143 REMARK 465 LYS B 144 REMARK 465 ASP B 145 REMARK 465 THR B 146 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 100 CG CD CE NZ REMARK 470 GLN A 103 CG CD OE1 NE2 REMARK 470 LYS A 119 CG CD CE NZ REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 LYS B 100 CG CD CE NZ REMARK 470 LYS B 142 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 58 O HOH A 2024 2.12 REMARK 500 OD1 ASN A 133 OG SER A 157 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 122 CG GLU B 122 CD 0.099 REMARK 500 GLU B 122 CD GLU B 122 OE1 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 52 CA - CB - CG ANGL. DEV. = 15.2 DEGREES REMARK 500 LEU A 79 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 16 57.12 -108.37 REMARK 500 GLN A 103 -68.79 -93.85 REMARK 500 ASP A 145 107.64 -55.12 REMARK 500 THR A 146 149.37 164.23 REMARK 500 ASP A 149 -61.56 -97.68 REMARK 500 ASN A 161 -51.63 -126.66 REMARK 500 ASP A 194 96.95 -60.55 REMARK 500 ASN B 161 -49.57 -130.36 REMARK 500 ASP B 194 48.82 -89.53 REMARK 500 VAL B 195 157.77 -39.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 144 ASP A 145 149.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1206 REMARK 999 REMARK 999 SEQUENCE REMARK 999 PROTEIN WAS CLONED WITH N-TERMINAL HISTIDINE TAG AND REMARK 999 THROMBINE CLEAVAGE SITE DBREF 2W7Q A 1 17 PDB 2W7Q 2W7Q 1 17 DBREF 2W7Q A 18 204 UNP Q9I0M4 LOLA_PSEAE 22 208 DBREF 2W7Q B 1 17 PDB 2W7Q 2W7Q 1 17 DBREF 2W7Q B 18 204 UNP Q9I0M4 LOLA_PSEAE 22 208 SEQRES 1 A 204 ALA GLU HIS HIS HIS HIS HIS HIS LEU VAL PRO ARG GLY SEQRES 2 A 204 SER ILE ALA ILE ASP ASP SER ALA ALA VAL GLN ARG LEU SEQRES 3 A 204 THR GLY LEU LEU ASN LYS ALA GLN THR LEU THR ALA ARG SEQRES 4 A 204 PHE SER GLN LEU THR LEU ASP GLY SER GLY THR ARG LEU SEQRES 5 A 204 GLN GLU THR ALA GLY GLN LEU SER LEU LYS ARG PRO GLY SEQRES 6 A 204 LEU PHE ARG TRP HIS THR ASP ALA PRO ASN GLU GLN LEU SEQRES 7 A 204 LEU ILE SER ASN GLY GLU LYS VAL TRP LEU TYR ASP PRO SEQRES 8 A 204 ASP LEU GLU GLN VAL THR ILE GLN LYS LEU ASP GLN ARG SEQRES 9 A 204 LEU THR GLN THR PRO ALA LEU LEU LEU SER GLY ASP ILE SEQRES 10 A 204 SER LYS ILE SER GLU SER PHE ALA ILE THR TYR LYS GLU SEQRES 11 A 204 GLY GLY ASN VAL VAL ASP PHE VAL LEU LYS PRO LYS THR SEQRES 12 A 204 LYS ASP THR LEU PHE ASP THR LEU ARG LEU SER PHE ARG SEQRES 13 A 204 SER GLY LYS VAL ASN ASP MET GLN MET ILE ASP GLY VAL SEQRES 14 A 204 GLY GLN ARG THR ASN ILE LEU PHE PHE ASP VAL LYS MET SEQRES 15 A 204 ASN GLU ALA LEU ASP ALA LYS GLN PHE THR PHE ASP VAL SEQRES 16 A 204 PRO PRO GLY VAL ASP VAL ILE GLN GLU SEQRES 1 B 204 ALA GLU HIS HIS HIS HIS HIS HIS LEU VAL PRO ARG GLY SEQRES 2 B 204 SER ILE ALA ILE ASP ASP SER ALA ALA VAL GLN ARG LEU SEQRES 3 B 204 THR GLY LEU LEU ASN LYS ALA GLN THR LEU THR ALA ARG SEQRES 4 B 204 PHE SER GLN LEU THR LEU ASP GLY SER GLY THR ARG LEU SEQRES 5 B 204 GLN GLU THR ALA GLY GLN LEU SER LEU LYS ARG PRO GLY SEQRES 6 B 204 LEU PHE ARG TRP HIS THR ASP ALA PRO ASN GLU GLN LEU SEQRES 7 B 204 LEU ILE SER ASN GLY GLU LYS VAL TRP LEU TYR ASP PRO SEQRES 8 B 204 ASP LEU GLU GLN VAL THR ILE GLN LYS LEU ASP GLN ARG SEQRES 9 B 204 LEU THR GLN THR PRO ALA LEU LEU LEU SER GLY ASP ILE SEQRES 10 B 204 SER LYS ILE SER GLU SER PHE ALA ILE THR TYR LYS GLU SEQRES 11 B 204 GLY GLY ASN VAL VAL ASP PHE VAL LEU LYS PRO LYS THR SEQRES 12 B 204 LYS ASP THR LEU PHE ASP THR LEU ARG LEU SER PHE ARG SEQRES 13 B 204 SER GLY LYS VAL ASN ASP MET GLN MET ILE ASP GLY VAL SEQRES 14 B 204 GLY GLN ARG THR ASN ILE LEU PHE PHE ASP VAL LYS MET SEQRES 15 B 204 ASN GLU ALA LEU ASP ALA LYS GLN PHE THR PHE ASP VAL SEQRES 16 B 204 PRO PRO GLY VAL ASP VAL ILE GLN GLU HET GOL A1205 6 HET GOL A1206 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *148(H2 O) HELIX 1 1 ASP A 19 LYS A 32 1 14 HELIX 2 2 LYS A 100 LEU A 105 1 6 HELIX 3 3 THR A 108 GLY A 115 5 8 HELIX 4 4 ASP A 116 SER A 121 1 6 HELIX 5 5 ASP A 187 THR A 192 5 6 HELIX 6 6 SER B 20 LYS B 32 1 13 HELIX 7 7 LEU B 101 LEU B 105 1 5 HELIX 8 8 THR B 108 GLY B 115 5 8 HELIX 9 9 ASP B 116 SER B 121 1 6 HELIX 10 10 ASP B 187 THR B 192 5 6 SHEET 1 AA12 PHE A 124 GLY A 131 0 SHEET 2 AA12 VAL A 134 PRO A 141 -1 O VAL A 134 N GLY A 131 SHEET 3 AA12 THR A 150 ARG A 156 -1 O LEU A 151 N LEU A 139 SHEET 4 AA12 LYS A 159 ILE A 166 -1 O LYS A 159 N ARG A 156 SHEET 5 AA12 ARG A 172 MET A 182 -1 O THR A 173 N MET A 165 SHEET 6 AA12 THR A 35 LEU A 45 -1 O THR A 37 N LYS A 181 SHEET 7 AA12 LEU A 52 LYS A 62 -1 O GLN A 53 N THR A 44 SHEET 8 AA12 LEU A 66 THR A 71 -1 O LEU A 66 N LYS A 62 SHEET 9 AA12 GLN A 77 ASN A 82 -1 O GLN A 77 N THR A 71 SHEET 10 AA12 LYS A 85 ASP A 90 -1 O LYS A 85 N ASN A 82 SHEET 11 AA12 GLN A 95 GLN A 99 -1 O GLN A 95 N ASP A 90 SHEET 12 AA12 ASP A 200 ILE A 202 1 O ASP A 200 N VAL A 96 SHEET 1 BA12 ALA B 125 GLY B 131 0 SHEET 2 BA12 VAL B 134 LYS B 140 -1 O VAL B 134 N GLY B 131 SHEET 3 BA12 PHE B 148 ARG B 156 -1 O LEU B 151 N LEU B 139 SHEET 4 BA12 LYS B 159 ASP B 167 -1 O LYS B 159 N ARG B 156 SHEET 5 BA12 ARG B 172 MET B 182 -1 O THR B 173 N MET B 165 SHEET 6 BA12 THR B 35 LEU B 45 -1 O THR B 37 N LYS B 181 SHEET 7 BA12 LEU B 52 LYS B 62 -1 O GLN B 53 N THR B 44 SHEET 8 BA12 LEU B 66 THR B 71 -1 O LEU B 66 N LYS B 62 SHEET 9 BA12 GLN B 77 SER B 81 -1 O GLN B 77 N THR B 71 SHEET 10 BA12 LYS B 85 ASP B 90 -1 O TRP B 87 N ILE B 80 SHEET 11 BA12 GLN B 95 LYS B 100 -1 O GLN B 95 N ASP B 90 SHEET 12 BA12 ASP B 200 GLN B 203 1 O ASP B 200 N VAL B 96 CISPEP 1 ARG A 63 PRO A 64 0 0.40 CISPEP 2 ALA A 73 PRO A 74 0 1.24 CISPEP 3 ARG B 63 PRO B 64 0 2.69 CISPEP 4 ALA B 73 PRO B 74 0 14.59 SITE 1 AC1 2 ASP A 102 LEU A 105 SITE 1 AC2 5 GLU A 54 ALA A 56 ALA A 73 HOH A2083 SITE 2 AC2 5 LYS B 85 CRYST1 41.656 68.439 61.350 90.00 94.83 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024006 0.000000 0.002028 0.00000 SCALE2 0.000000 0.014612 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016358 0.00000