HEADER TRANSFERASE 16-FEB-09 2WAV OBSLTE 17-NOV-09 2WAV 2WXC TITLE THE FOLDING MECHANISM OF BBL: PLASTICITY OF TRANSITION TITLE 2 STATE STRUCTURE OBSERVED WITHIN AN ULTRAFAST FOLDING TITLE 3 PROTEIN FAMILY COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROLIPOYLTRANSSUCCINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 109-153; COMPND 5 SYNONYM: DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF COMPND 6 PYRUVATE DEHYDROGENASE COMPLEX, E2, COMPND 7 DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT COMPND 8 OF PYRUVATE DEHYDROGENASE COMPLEX; COMPND 9 EC: 2.3.1.61; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PERIPHERAL SUBUNIT BINDING DOMAIN FAMILY, TEMPERATURE-JUMP KEYWDS 2 FLUORESCENCE SPECTROSCOPY, ULTRAFAST PROTEIN FOLDING, KEYWDS 3 TRANSITION STATE MOVEMENT, TRANSFERASE, ACYLTRANSFERASE, KEYWDS 4 PHI- VALUE ANALYSIS EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR H.NEUWEILER,T.D.SHARPE,T.J.RUTHERFORD,C.M.JOHNSON, AUTHOR 2 N.FERGUSON,A.R.FERSHT REVDAT 4 17-NOV-09 2WAV 1 OBSLTE REVDAT 3 21-JUL-09 2WAV 1 JRNL REVDAT 2 26-MAY-09 2WAV 1 JRNL REVDAT 1 24-FEB-09 2WAV 0 JRNL AUTH H.NEUWEILER,T.D.SHARPE,T.J.RUTHERFORD,C.M.JOHNSON, JRNL AUTH 2 M.D.ALLEN,N.FERGUSON,A.R.FERSHT JRNL TITL THE FOLDING MECHANISM OF BBL: PLASTICITY OF JRNL TITL 2 TRANSITION STATE STRUCTURE OBSERVED WITHIN AN JRNL TITL 3 ULTRAFAST FOLDING PROTEIN FAMILY. JRNL REF J.MOL.BIOL. V. 390 1060 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19445954 JRNL DOI 10.1016/J.JMB.2009.05.011 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WAV COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-FEB-09. REMARK 100 THE PDBE ID CODE IS EBI-38815. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1.0 REMARK 210 SAMPLE CONTENTS : 95% WATER/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : ADVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ANSIG 3.3 REMARK 210 METHOD USED : CNS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE REMARK 210 NMR SPECTROSCOPY ON 13C, 15N-LABELED REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, HIS 125 TO TRP REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 125 -73.41 -60.82 REMARK 500 1 ASN A 127 -45.98 -172.68 REMARK 500 1 ASN A 128 94.69 -69.15 REMARK 500 1 ALA A 130 -161.20 -72.75 REMARK 500 1 LEU A 131 151.33 63.19 REMARK 500 2 SER A 125 153.52 61.68 REMARK 500 2 ASP A 129 161.69 60.25 REMARK 500 2 ALA A 130 -44.36 -146.20 REMARK 500 2 THR A 152 42.70 -140.75 REMARK 500 2 LYS A 169 -72.21 -90.50 REMARK 500 3 ASN A 127 -63.02 -140.75 REMARK 500 3 THR A 152 89.78 -154.44 REMARK 500 4 SER A 125 -78.74 64.31 REMARK 500 4 ALA A 130 30.02 -152.22 REMARK 500 4 PRO A 133 -73.74 -57.72 REMARK 500 4 THR A 152 56.60 -92.36 REMARK 500 4 VAL A 154 34.32 -97.85 REMARK 500 5 GLN A 126 -49.59 -144.83 REMARK 500 5 ASN A 128 88.52 61.26 REMARK 500 5 ALA A 130 31.42 -147.14 REMARK 500 6 ASN A 127 35.76 -159.57 REMARK 500 7 ASN A 143 19.03 58.71 REMARK 500 7 VAL A 154 48.60 -92.47 REMARK 500 7 LYS A 169 78.94 -107.59 REMARK 500 8 ASN A 128 85.72 -176.22 REMARK 500 8 ALA A 130 49.11 -107.82 REMARK 500 8 LYS A 150 -168.48 -71.60 REMARK 500 9 SER A 125 -60.04 -106.30 REMARK 500 9 LEU A 131 -176.55 60.30 REMARK 500 9 THR A 152 58.03 -118.18 REMARK 500 10 ASN A 128 -177.93 60.83 REMARK 500 10 LEU A 131 -177.33 59.73 REMARK 500 10 THR A 152 57.17 -95.24 REMARK 500 10 LYS A 169 -78.12 -70.73 REMARK 500 11 ASN A 127 -39.49 -177.44 REMARK 500 11 ASP A 129 44.76 -96.93 REMARK 500 11 ALA A 130 -161.57 -113.06 REMARK 500 11 LEU A 131 -178.76 62.56 REMARK 500 11 THR A 152 91.14 59.65 REMARK 500 11 VAL A 154 52.94 -149.18 REMARK 500 12 ASN A 128 -49.14 -152.01 REMARK 500 12 ALA A 130 -39.24 -177.59 REMARK 500 12 THR A 152 97.33 -172.58 REMARK 500 12 VAL A 154 37.85 -146.98 REMARK 500 13 SER A 125 -175.63 -66.91 REMARK 500 13 THR A 152 35.21 -152.95 REMARK 500 13 VAL A 154 35.26 -97.80 REMARK 500 13 LYS A 169 37.63 -98.08 REMARK 500 14 GLN A 126 -66.88 -105.84 REMARK 500 14 ASN A 127 -48.88 -135.43 REMARK 500 14 ASN A 128 37.21 -175.86 REMARK 500 14 THR A 152 78.19 -159.54 REMARK 500 14 LYS A 169 109.07 -168.16 REMARK 500 15 ALA A 130 67.69 -175.10 REMARK 500 15 LEU A 131 -164.95 -124.96 REMARK 500 15 THR A 152 104.48 174.48 REMARK 500 15 ARG A 157 -59.31 -156.80 REMARK 500 15 LEU A 158 109.53 -57.14 REMARK 500 15 LYS A 169 113.83 -174.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 HIS-TRP POINT MUTATION WAS INTRODUCED TO ENABLE FOLDING ANALYSIS DBREF 2WAV A 124 125 PDB 2WAV 2WAV 124 125 DBREF 2WAV A 126 170 UNP B7M5P0 B7M5P0_ECOLX 109 153 SEQADV 2WAV TRP A 142 UNP B7M5P0 HIS 125 ENGINEERED MUTATION SEQRES 1 A 47 GLY SER GLN ASN ASN ASP ALA LEU SER PRO ALA ILE ARG SEQRES 2 A 47 ARG LEU LEU ALA GLU TRP ASN LEU ASP ALA SER ALA ILE SEQRES 3 A 47 LYS GLY THR GLY VAL GLY GLY ARG LEU THR ARG GLU ASP SEQRES 4 A 47 VAL GLU LYS HIS LEU ALA LYS ALA HELIX 1 1 SER A 132 TRP A 142 1 11 HELIX 2 2 ASP A 145 ILE A 149 5 5 HELIX 3 3 THR A 159 LYS A 169 1 11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MODEL 11 ENDMDL MODEL 12 ENDMDL MODEL 13 ENDMDL MODEL 14 ENDMDL MODEL 15 ENDMDL MASTER 128 0 0 3 0 0 0 6 711 15 0 4 END