HEADER HYDROLASE 20-FEB-09 2WB5 TITLE GLCNACSTATINS ARE NANOMOLAR INHIBITORS OF HUMAN O-GLCNACASE INDUCING TITLE 2 CELLULAR HYPER-O-GLCNACYLATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: O-GLCNACASE NAGJ; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: O-GLCNACASE DOMAIN, RESIDUES 31-624; COMPND 5 SYNONYM: BETA-HEXOSAMINIDASE, GH84, HEXOSAMINIDASE B, N-ACETYL-BETA- COMPND 6 GLUCOSAMINIDASE, BETA-N-ACETYLHEXOSAMINIDASE; COMPND 7 EC: 3.2.1.35, 3.2.1.52; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS HYDROLASE, GLYCOSIDASE EXPDTA X-RAY DIFFRACTION AUTHOR H.C.DORFMUELLER,V.S.BORODKIN,M.SCHIMPL,D.M.F.VAN AALTEN REVDAT 4 13-DEC-23 2WB5 1 REMARK REVDAT 3 21-DEC-11 2WB5 1 JRNL REVDAT 2 13-JUL-11 2WB5 1 VERSN REVDAT 1 31-MAR-09 2WB5 0 JRNL AUTH H.C.DORFMUELLER,V.S.BORODKIN,M.SCHIMPL,D.M.F.VAN AALTEN JRNL TITL GLCNACSTATINS ARE NANOMOLAR INHIBITORS OF HUMAN O-GLCNACASE JRNL TITL 2 INDUCING CELLULAR HYPER-O-GLCNACYLATION JRNL REF BIOCHEM.J. V. 420 221 2009 JRNL REFN ISSN 0264-6021 JRNL PMID 19275764 JRNL DOI 10.1042/BJ20090110 REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 59800 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.000 REMARK 3 FREE R VALUE TEST SET COUNT : 600 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.31 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.37 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4069 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.3700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9254 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 641 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.304 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.224 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.157 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.169 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9499 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12901 ; 1.473 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1166 ; 6.829 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 489 ;38.985 ;25.951 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1596 ;17.571 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;16.992 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1405 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7368 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5827 ; 0.588 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9393 ; 1.105 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3672 ; 2.019 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3508 ; 3.183 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 41 A 624 3 REMARK 3 1 B 41 B 624 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2335 ; 0.21 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 2335 ; 0.21 ; 0.05 REMARK 3 LOOSE POSITIONAL 1 A (A): 2281 ; 0.51 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 2281 ; 0.51 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 2335 ; 1.62 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 2335 ; 1.62 ; 0.50 REMARK 3 LOOSE THERMAL 1 A (A**2): 2281 ; 1.96 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 2281 ; 1.96 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 40 A 624 REMARK 3 RESIDUE RANGE : A 1628 A 1628 REMARK 3 ORIGIN FOR THE GROUP (A): 31.7960 38.5240 36.7290 REMARK 3 T TENSOR REMARK 3 T11: 0.0414 T22: 0.2180 REMARK 3 T33: -0.0450 T12: 0.0980 REMARK 3 T13: -0.0546 T23: -0.0731 REMARK 3 L TENSOR REMARK 3 L11: 2.1643 L22: 0.6946 REMARK 3 L33: 0.8929 L12: 0.1140 REMARK 3 L13: -0.7352 L23: 0.1716 REMARK 3 S TENSOR REMARK 3 S11: -0.0795 S12: -0.5639 S13: 0.1043 REMARK 3 S21: 0.2045 S22: 0.1232 S23: -0.0494 REMARK 3 S31: 0.0507 S32: 0.3784 S33: -0.0437 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 40 B 624 REMARK 3 RESIDUE RANGE : B 1628 B 1628 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2510 3.1720 1.1000 REMARK 3 T TENSOR REMARK 3 T11: 0.0868 T22: -0.0237 REMARK 3 T33: -0.0022 T12: 0.0719 REMARK 3 T13: -0.0362 T23: -0.0598 REMARK 3 L TENSOR REMARK 3 L11: 0.8494 L22: 1.0862 REMARK 3 L33: 0.5941 L12: 0.3552 REMARK 3 L13: 0.2184 L23: -0.2082 REMARK 3 S TENSOR REMARK 3 S11: 0.0811 S12: 0.1351 S13: -0.1689 REMARK 3 S21: -0.1945 S22: 0.0509 S23: -0.0310 REMARK 3 S31: 0.2953 S32: 0.1045 S33: -0.1320 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WB5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1290038847. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9334 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62941 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 29.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 2J62 REMARK 200 REMARK 200 REMARK: LIGAND, WATERS AND HETATM WERE REMOVED FROM STARTING MODEL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8000, 0.2 M AMMONIUM SULFATE, REMARK 280 0.1 M SODIUM COCADYLATE, PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 64.90850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.16550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 72.86150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.16550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 64.90850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 72.86150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 64.90850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 72.86150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.16550 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 72.86150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 64.90850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 76.16550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2265 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 31 REMARK 465 GLY A 32 REMARK 465 PRO A 33 REMARK 465 LYS A 34 REMARK 465 THR A 35 REMARK 465 GLY A 36 REMARK 465 GLU A 37 REMARK 465 GLU A 38 REMARK 465 ASN A 39 REMARK 465 VAL B 31 REMARK 465 GLY B 32 REMARK 465 PRO B 33 REMARK 465 LYS B 34 REMARK 465 THR B 35 REMARK 465 GLY B 36 REMARK 465 GLU B 37 REMARK 465 GLU B 38 REMARK 465 ASN B 39 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 575 CA CB CD NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 108 OD1 ASP A 111 1.78 REMARK 500 N ASP A 58 OE2 GLU A 170 1.89 REMARK 500 ND2 ASN A 94 OG SER A 101 1.93 REMARK 500 O GLU A 76 ND2 ASN A 80 2.06 REMARK 500 O PRO A 99 N SER A 101 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2264 O HOH B 2264 7555 1.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 96 CD GLU A 96 OE1 0.109 REMARK 500 SER A 101 CB SER A 101 OG 0.215 REMARK 500 GLY A 140 C GLY A 140 O -0.112 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN A 67 O - C - N ANGL. DEV. = 9.6 DEGREES REMARK 500 LEU B 284 CA - CB - CG ANGL. DEV. = -14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 74 153.87 -42.07 REMARK 500 THR A 87 -74.22 -45.90 REMARK 500 ALA A 88 -27.02 -36.91 REMARK 500 ASN A 97 -133.02 -34.81 REMARK 500 ASP A 98 -166.13 -55.47 REMARK 500 PRO A 99 -173.25 -51.04 REMARK 500 ASN A 100 -20.83 43.32 REMARK 500 SER A 101 153.35 -42.55 REMARK 500 GLU A 108 -146.05 -79.54 REMARK 500 ASP A 110 -82.70 -47.14 REMARK 500 ASP A 111 148.05 -22.14 REMARK 500 GLU A 130 152.71 -45.55 REMARK 500 ASP A 139 100.39 -23.40 REMARK 500 GLU A 165 -2.15 84.63 REMARK 500 SER A 166 -19.13 107.02 REMARK 500 ALA A 216 43.47 -162.53 REMARK 500 ARG A 224 -66.61 -160.22 REMARK 500 PRO A 232 171.31 -56.89 REMARK 500 LYS A 302 63.95 -110.90 REMARK 500 PHE A 318 -70.90 -115.32 REMARK 500 PHE A 403 79.32 -165.15 REMARK 500 ASP A 486 110.81 -167.03 REMARK 500 LYS A 488 -3.12 81.32 REMARK 500 THR A 489 -106.43 -130.80 REMARK 500 SER A 493 149.04 -174.93 REMARK 500 ALA A 498 69.07 14.64 REMARK 500 LYS A 515 36.20 73.44 REMARK 500 GLU A 578 48.49 39.07 REMARK 500 VAL A 608 -91.61 -117.49 REMARK 500 VAL B 41 -73.56 -130.93 REMARK 500 VAL B 43 116.04 83.78 REMARK 500 ASN B 90 -0.54 67.14 REMARK 500 ASN B 121 66.46 60.78 REMARK 500 ASN B 127 -42.69 125.41 REMARK 500 GLU B 131 -6.52 82.28 REMARK 500 ASP B 139 108.12 -22.82 REMARK 500 SER B 166 -18.40 81.50 REMARK 500 ALA B 216 41.37 -156.58 REMARK 500 ARG B 224 -66.37 -145.66 REMARK 500 PRO B 232 169.36 -40.81 REMARK 500 ASP B 262 12.22 -151.88 REMARK 500 PHE B 318 -54.75 -133.26 REMARK 500 ASN B 343 58.57 39.05 REMARK 500 ASP B 388 75.69 -0.47 REMARK 500 PHE B 403 64.05 -163.36 REMARK 500 ASP B 486 115.41 -160.88 REMARK 500 LYS B 488 -9.11 77.60 REMARK 500 THR B 489 -100.79 -127.09 REMARK 500 ALA B 498 62.01 26.70 REMARK 500 VAL B 608 -91.81 -130.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 99 ASN A 100 102.04 REMARK 500 VAL B 41 LEU B 42 -37.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2017 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A2039 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH B2058 DISTANCE = 7.03 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AC" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "BC" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 8-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 9-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1625 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1626 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1627 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VGB A 1628 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1625 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1626 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1627 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VGB B 1628 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2J62 RELATED DB: PDB REMARK 900 STRUCTURE OF A BACTERIAL O-GLCNACASE IN COMPLEX WITH GLCNACSTATIN REMARK 900 RELATED ID: 2JH2 RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF A COHESIN-LIKE MODULE FROM CLOSTRIDIUM REMARK 900 PERFRINGENS REMARK 900 RELATED ID: 2V5C RELATED DB: PDB REMARK 900 FAMILY 84 GLYCOSIDE HYDROLASE FROM CLOSTRIDIUM PERFRINGENS, 2.1 REMARK 900 ANGSTROM STRUCTURE REMARK 900 RELATED ID: 2VUR RELATED DB: PDB REMARK 900 CHEMICAL DISSECTION OF THE LINK BETWEEN STREPTOZOTOCIN, O-GLCNAC REMARK 900 AND PANCREATIC CELL DEATH REMARK 900 RELATED ID: 2V5D RELATED DB: PDB REMARK 900 STRUCTURE OF A FAMILY 84 GLYCOSIDE HYDROLASE AND A FAMILY 32 REMARK 900 CARBOHYDRATE-BINDING MODULE IN TANDEM FROM CLOSTRIDIUM PERFRINGENS REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHOR COMMENTED THAT ASP 388 IS THE CORRECT ONE FOR THE REMARK 999 ACTUAL PROTEIN STRUCTURE 2WB5. DBREF 2WB5 A 31 624 UNP Q0TR53 OGA_CLOP1 31 624 DBREF 2WB5 B 31 624 UNP Q0TR53 OGA_CLOP1 31 624 SEQADV 2WB5 ASP A 388 UNP Q0TR53 ASN 388 CONFLICT SEQADV 2WB5 ASP B 388 UNP Q0TR53 ASN 388 CONFLICT SEQRES 1 A 594 VAL GLY PRO LYS THR GLY GLU GLU ASN GLN VAL LEU VAL SEQRES 2 A 594 PRO ASN LEU ASN PRO THR PRO GLU ASN LEU GLU VAL VAL SEQRES 3 A 594 GLY ASP GLY PHE LYS ILE THR SER SER ILE ASN LEU VAL SEQRES 4 A 594 GLY GLU GLU GLU ALA ASP GLU ASN ALA VAL ASN ALA LEU SEQRES 5 A 594 ARG GLU PHE LEU THR ALA ASN ASN ILE GLU ILE ASN SER SEQRES 6 A 594 GLU ASN ASP PRO ASN SER THR THR LEU ILE ILE GLY GLU SEQRES 7 A 594 VAL ASP ASP ASP ILE PRO GLU LEU ASP GLU ALA LEU ASN SEQRES 8 A 594 GLY THR THR ALA GLU ASN LEU LYS GLU GLU GLY TYR ALA SEQRES 9 A 594 LEU VAL SER ASN ASP GLY LYS ILE ALA ILE GLU GLY LYS SEQRES 10 A 594 ASP GLY ASP GLY THR PHE TYR GLY VAL GLN THR PHE LYS SEQRES 11 A 594 GLN LEU VAL LYS GLU SER ASN ILE PRO GLU VAL ASN ILE SEQRES 12 A 594 THR ASP TYR PRO THR VAL SER ALA ARG GLY ILE VAL GLU SEQRES 13 A 594 GLY PHE TYR GLY THR PRO TRP THR HIS GLN ASP ARG LEU SEQRES 14 A 594 ASP GLN ILE LYS PHE TYR GLY GLU ASN LYS LEU ASN THR SEQRES 15 A 594 TYR ILE TYR ALA PRO LYS ASP ASP PRO TYR HIS ARG GLU SEQRES 16 A 594 LYS TRP ARG GLU PRO TYR PRO GLU SER GLU MET GLN ARG SEQRES 17 A 594 MET GLN GLU LEU ILE ASN ALA SER ALA GLU ASN LYS VAL SEQRES 18 A 594 ASP PHE VAL PHE GLY ILE SER PRO GLY ILE ASP ILE ARG SEQRES 19 A 594 PHE ASP GLY ASP ALA GLY GLU GLU ASP PHE ASN HIS LEU SEQRES 20 A 594 ILE THR LYS ALA GLU SER LEU TYR ASP MET GLY VAL ARG SEQRES 21 A 594 SER PHE ALA ILE TYR TRP ASP ASP ILE GLN ASP LYS SER SEQRES 22 A 594 ALA ALA LYS HIS ALA GLN VAL LEU ASN ARG PHE ASN GLU SEQRES 23 A 594 GLU PHE VAL LYS ALA LYS GLY ASP VAL LYS PRO LEU ILE SEQRES 24 A 594 THR VAL PRO THR GLU TYR ASP THR GLY ALA MET VAL SER SEQRES 25 A 594 ASN GLY GLN PRO ARG ALA TYR THR ARG ILE PHE ALA GLU SEQRES 26 A 594 THR VAL ASP PRO SER ILE GLU VAL MET TRP THR GLY PRO SEQRES 27 A 594 GLY VAL VAL THR ASN GLU ILE PRO LEU SER ASP ALA GLN SEQRES 28 A 594 LEU ILE SER GLY ILE TYR ASP ARG ASN MET ALA VAL TRP SEQRES 29 A 594 TRP ASN TYR PRO VAL THR ASP TYR PHE LYS GLY LYS LEU SEQRES 30 A 594 ALA LEU GLY PRO MET HIS GLY LEU ASP LYS GLY LEU ASN SEQRES 31 A 594 GLN TYR VAL ASP PHE PHE THR VAL ASN PRO MET GLU HIS SEQRES 32 A 594 ALA GLU LEU SER LYS ILE SER ILE HIS THR ALA ALA ASP SEQRES 33 A 594 TYR SER TRP ASN MET ASP ASN TYR ASP TYR ASP LYS ALA SEQRES 34 A 594 TRP ASN ARG ALA ILE ASP MET LEU TYR GLY ASP LEU ALA SEQRES 35 A 594 GLU ASP MET LYS VAL PHE ALA ASN HIS SER THR ARG MET SEQRES 36 A 594 ASP ASN LYS THR TRP ALA LYS SER GLY ARG GLU ASP ALA SEQRES 37 A 594 PRO GLU LEU ARG ALA LYS MET ASP GLU LEU TRP ASN LYS SEQRES 38 A 594 LEU SER SER LYS GLU ASP ALA SER ALA LEU ILE GLU GLU SEQRES 39 A 594 LEU TYR GLY GLU PHE ALA ARG MET GLU GLU ALA CYS ASN SEQRES 40 A 594 ASN LEU LYS ALA ASN LEU PRO GLU VAL ALA LEU GLU GLU SEQRES 41 A 594 CYS SER ARG GLN LEU ASP GLU LEU ILE THR LEU ALA GLN SEQRES 42 A 594 GLY ASP LYS ALA SER LEU ASP MET ILE VAL ALA GLN LEU SEQRES 43 A 594 ASN GLU ASP THR GLU ALA TYR GLU SER ALA LYS GLU ILE SEQRES 44 A 594 ALA GLN ASN LYS LEU ASN THR ALA LEU SER SER PHE ALA SEQRES 45 A 594 VAL ILE SER GLU LYS VAL ALA GLN SER PHE ILE GLN GLU SEQRES 46 A 594 ALA LEU SER PHE ASP LEU THR LEU ILE SEQRES 1 B 594 VAL GLY PRO LYS THR GLY GLU GLU ASN GLN VAL LEU VAL SEQRES 2 B 594 PRO ASN LEU ASN PRO THR PRO GLU ASN LEU GLU VAL VAL SEQRES 3 B 594 GLY ASP GLY PHE LYS ILE THR SER SER ILE ASN LEU VAL SEQRES 4 B 594 GLY GLU GLU GLU ALA ASP GLU ASN ALA VAL ASN ALA LEU SEQRES 5 B 594 ARG GLU PHE LEU THR ALA ASN ASN ILE GLU ILE ASN SER SEQRES 6 B 594 GLU ASN ASP PRO ASN SER THR THR LEU ILE ILE GLY GLU SEQRES 7 B 594 VAL ASP ASP ASP ILE PRO GLU LEU ASP GLU ALA LEU ASN SEQRES 8 B 594 GLY THR THR ALA GLU ASN LEU LYS GLU GLU GLY TYR ALA SEQRES 9 B 594 LEU VAL SER ASN ASP GLY LYS ILE ALA ILE GLU GLY LYS SEQRES 10 B 594 ASP GLY ASP GLY THR PHE TYR GLY VAL GLN THR PHE LYS SEQRES 11 B 594 GLN LEU VAL LYS GLU SER ASN ILE PRO GLU VAL ASN ILE SEQRES 12 B 594 THR ASP TYR PRO THR VAL SER ALA ARG GLY ILE VAL GLU SEQRES 13 B 594 GLY PHE TYR GLY THR PRO TRP THR HIS GLN ASP ARG LEU SEQRES 14 B 594 ASP GLN ILE LYS PHE TYR GLY GLU ASN LYS LEU ASN THR SEQRES 15 B 594 TYR ILE TYR ALA PRO LYS ASP ASP PRO TYR HIS ARG GLU SEQRES 16 B 594 LYS TRP ARG GLU PRO TYR PRO GLU SER GLU MET GLN ARG SEQRES 17 B 594 MET GLN GLU LEU ILE ASN ALA SER ALA GLU ASN LYS VAL SEQRES 18 B 594 ASP PHE VAL PHE GLY ILE SER PRO GLY ILE ASP ILE ARG SEQRES 19 B 594 PHE ASP GLY ASP ALA GLY GLU GLU ASP PHE ASN HIS LEU SEQRES 20 B 594 ILE THR LYS ALA GLU SER LEU TYR ASP MET GLY VAL ARG SEQRES 21 B 594 SER PHE ALA ILE TYR TRP ASP ASP ILE GLN ASP LYS SER SEQRES 22 B 594 ALA ALA LYS HIS ALA GLN VAL LEU ASN ARG PHE ASN GLU SEQRES 23 B 594 GLU PHE VAL LYS ALA LYS GLY ASP VAL LYS PRO LEU ILE SEQRES 24 B 594 THR VAL PRO THR GLU TYR ASP THR GLY ALA MET VAL SER SEQRES 25 B 594 ASN GLY GLN PRO ARG ALA TYR THR ARG ILE PHE ALA GLU SEQRES 26 B 594 THR VAL ASP PRO SER ILE GLU VAL MET TRP THR GLY PRO SEQRES 27 B 594 GLY VAL VAL THR ASN GLU ILE PRO LEU SER ASP ALA GLN SEQRES 28 B 594 LEU ILE SER GLY ILE TYR ASP ARG ASN MET ALA VAL TRP SEQRES 29 B 594 TRP ASN TYR PRO VAL THR ASP TYR PHE LYS GLY LYS LEU SEQRES 30 B 594 ALA LEU GLY PRO MET HIS GLY LEU ASP LYS GLY LEU ASN SEQRES 31 B 594 GLN TYR VAL ASP PHE PHE THR VAL ASN PRO MET GLU HIS SEQRES 32 B 594 ALA GLU LEU SER LYS ILE SER ILE HIS THR ALA ALA ASP SEQRES 33 B 594 TYR SER TRP ASN MET ASP ASN TYR ASP TYR ASP LYS ALA SEQRES 34 B 594 TRP ASN ARG ALA ILE ASP MET LEU TYR GLY ASP LEU ALA SEQRES 35 B 594 GLU ASP MET LYS VAL PHE ALA ASN HIS SER THR ARG MET SEQRES 36 B 594 ASP ASN LYS THR TRP ALA LYS SER GLY ARG GLU ASP ALA SEQRES 37 B 594 PRO GLU LEU ARG ALA LYS MET ASP GLU LEU TRP ASN LYS SEQRES 38 B 594 LEU SER SER LYS GLU ASP ALA SER ALA LEU ILE GLU GLU SEQRES 39 B 594 LEU TYR GLY GLU PHE ALA ARG MET GLU GLU ALA CYS ASN SEQRES 40 B 594 ASN LEU LYS ALA ASN LEU PRO GLU VAL ALA LEU GLU GLU SEQRES 41 B 594 CYS SER ARG GLN LEU ASP GLU LEU ILE THR LEU ALA GLN SEQRES 42 B 594 GLY ASP LYS ALA SER LEU ASP MET ILE VAL ALA GLN LEU SEQRES 43 B 594 ASN GLU ASP THR GLU ALA TYR GLU SER ALA LYS GLU ILE SEQRES 44 B 594 ALA GLN ASN LYS LEU ASN THR ALA LEU SER SER PHE ALA SEQRES 45 B 594 VAL ILE SER GLU LYS VAL ALA GLN SER PHE ILE GLN GLU SEQRES 46 B 594 ALA LEU SER PHE ASP LEU THR LEU ILE HET CL A1625 1 HET CL A1626 1 HET NA A1627 1 HET VGB A1628 26 HET CL B1625 1 HET CL B1626 1 HET CL B1627 1 HET VGB B1628 26 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM VGB (5R,6R,7R,8S)-6,7-DIHYDROXY-5-(HYDROXYMETHYL)-2-(2- HETNAM 2 VGB PHENYLETHYL)-8-(PROPANOYLAMINO)-5,6,7,8-TETRAHYDRO-1H- HETNAM 3 VGB IMIDAZO[1,2-A]PYRIDIN-4-IUM FORMUL 3 CL 5(CL 1-) FORMUL 5 NA NA 1+ FORMUL 6 VGB 2(C19 H26 N3 O4 1+) FORMUL 11 HOH *641(H2 O) HELIX 1 1 ASP A 75 ASN A 89 1 15 HELIX 2 2 ILE A 113 ASN A 121 1 9 HELIX 3 3 ASP A 148 VAL A 163 1 16 HELIX 4 4 THR A 194 ASN A 208 1 15 HELIX 5 5 ASP A 220 ARG A 224 5 5 HELIX 6 6 PRO A 232 ASN A 249 1 18 HELIX 7 7 ASP A 266 ASP A 286 1 21 HELIX 8 8 SER A 303 PHE A 318 1 16 HELIX 9 9 PHE A 318 GLY A 323 1 6 HELIX 10 10 ASP A 336 MET A 340 1 5 HELIX 11 11 ARG A 347 VAL A 357 1 11 HELIX 12 12 PRO A 376 ASP A 388 1 13 HELIX 13 13 GLY A 418 GLN A 421 5 4 HELIX 14 14 SER A 437 ASN A 450 1 14 HELIX 15 15 ASP A 455 GLY A 469 1 15 HELIX 16 16 LEU A 471 ASN A 480 1 10 HELIX 17 17 ALA A 498 LYS A 515 1 18 HELIX 18 18 ALA A 518 LEU A 543 1 26 HELIX 19 19 PRO A 544 ALA A 574 1 31 HELIX 20 20 ASP A 579 SER A 600 1 22 HELIX 21 21 VAL A 608 PHE A 619 1 12 HELIX 22 22 ASP B 75 ASN B 89 1 15 HELIX 23 23 ILE B 113 ASN B 121 1 9 HELIX 24 24 ASP B 148 VAL B 163 1 16 HELIX 25 25 THR B 194 ASN B 208 1 15 HELIX 26 26 PRO B 232 ASN B 249 1 18 HELIX 27 27 ASP B 266 ASP B 286 1 21 HELIX 28 28 SER B 303 PHE B 318 1 16 HELIX 29 29 PHE B 318 GLY B 323 1 6 HELIX 30 30 ASP B 336 MET B 340 1 5 HELIX 31 31 ARG B 347 VAL B 357 1 11 HELIX 32 32 PRO B 376 ASP B 388 1 13 HELIX 33 33 GLY B 418 GLN B 421 5 4 HELIX 34 34 SER B 437 ASN B 450 1 14 HELIX 35 35 MET B 451 TYR B 454 5 4 HELIX 36 36 ASP B 455 GLY B 469 1 15 HELIX 37 37 LEU B 471 HIS B 481 1 11 HELIX 38 38 ALA B 498 SER B 514 1 17 HELIX 39 39 ALA B 518 LEU B 543 1 26 HELIX 40 40 PRO B 544 ASN B 577 1 34 HELIX 41 41 ASP B 579 SER B 600 1 22 HELIX 42 42 VAL B 608 PHE B 619 1 12 SHEET 1 AA 7 ASN A 52 VAL A 55 0 SHEET 2 AA 7 VAL A 171 ASP A 175 -1 O ASN A 172 N GLU A 54 SHEET 3 AA 7 TYR A 133 ASN A 138 -1 O TYR A 133 N ASP A 175 SHEET 4 AA 7 LYS A 141 GLY A 146 -1 O LYS A 141 N ASN A 138 SHEET 5 AA 7 THR A 102 GLY A 107 1 O THR A 103 N ILE A 142 SHEET 6 AA 7 SER A 65 VAL A 69 1 O SER A 65 N THR A 102 SHEET 7 AA 7 GLU A 92 ILE A 93 1 O GLU A 92 N ILE A 66 SHEET 1 AB 2 PHE A 60 LYS A 61 0 SHEET 2 AB 2 ASN A 167 ILE A 168 -1 O ILE A 168 N PHE A 60 SHEET 1 AC 9 ALA A 181 GLU A 186 0 SHEET 2 AC 9 VAL A 423 VAL A 428 1 O ASP A 424 N ALA A 181 SHEET 3 AC 9 MET A 391 TRP A 395 1 O MET A 391 N ASP A 424 SHEET 4 AC 9 GLU A 362 TRP A 365 1 O VAL A 363 N ALA A 392 SHEET 5 AC 9 ILE A 329 VAL A 331 1 O THR A 330 N MET A 364 SHEET 6 AC 9 PHE A 292 TYR A 295 1 O PHE A 292 N ILE A 329 SHEET 7 AC 9 ASP A 252 ILE A 257 1 O PHE A 255 N ALA A 293 SHEET 8 AC 9 THR A 212 TYR A 215 1 O TYR A 213 N VAL A 254 SHEET 9 AC 9 ALA A 181 GLU A 186 1 O ILE A 184 N ILE A 214 SHEET 1 AD 2 VAL A 341 SER A 342 0 SHEET 2 AD 2 GLN A 345 PRO A 346 -1 O GLN A 345 N SER A 342 SHEET 1 AE 2 MET A 485 ASP A 486 0 SHEET 2 AE 2 LYS A 492 SER A 493 -1 O SER A 493 N MET A 485 SHEET 1 BA 7 ASN B 52 VAL B 55 0 SHEET 2 BA 7 VAL B 171 ASP B 175 -1 O ASN B 172 N GLU B 54 SHEET 3 BA 7 TYR B 133 ASN B 138 -1 O TYR B 133 N ASP B 175 SHEET 4 BA 7 LYS B 141 GLY B 146 -1 O LYS B 141 N ASN B 138 SHEET 5 BA 7 THR B 102 GLU B 108 1 O THR B 103 N ILE B 142 SHEET 6 BA 7 SER B 65 VAL B 69 1 O SER B 65 N THR B 102 SHEET 7 BA 7 GLU B 92 ILE B 93 1 O GLU B 92 N ILE B 66 SHEET 1 BB 2 PHE B 60 LYS B 61 0 SHEET 2 BB 2 ASN B 167 ILE B 168 -1 O ILE B 168 N PHE B 60 SHEET 1 BC 9 ALA B 181 GLU B 186 0 SHEET 2 BC 9 VAL B 423 VAL B 428 1 O ASP B 424 N ALA B 181 SHEET 3 BC 9 MET B 391 TRP B 395 1 O MET B 391 N ASP B 424 SHEET 4 BC 9 GLU B 362 TRP B 365 1 O VAL B 363 N ALA B 392 SHEET 5 BC 9 ILE B 329 VAL B 331 1 O THR B 330 N MET B 364 SHEET 6 BC 9 SER B 291 TYR B 295 1 O PHE B 292 N ILE B 329 SHEET 7 BC 9 ASP B 252 ILE B 257 1 O PHE B 253 N SER B 291 SHEET 8 BC 9 THR B 212 TYR B 215 1 O TYR B 213 N VAL B 254 SHEET 9 BC 9 ALA B 181 GLU B 186 1 O ILE B 184 N ILE B 214 SHEET 1 BD 2 VAL B 341 SER B 342 0 SHEET 2 BD 2 GLN B 345 PRO B 346 -1 O GLN B 345 N SER B 342 SHEET 1 BE 2 MET B 485 ASP B 486 0 SHEET 2 BE 2 LYS B 492 SER B 493 -1 O SER B 493 N MET B 485 CISPEP 1 GLN A 40 VAL A 41 0 -9.86 CISPEP 2 ASN A 47 PRO A 48 0 -3.05 CISPEP 3 ASP A 98 PRO A 99 0 -1.33 CISPEP 4 TYR A 397 PRO A 398 0 21.01 CISPEP 5 ASN B 47 PRO B 48 0 3.81 CISPEP 6 GLU B 126 ASN B 127 0 2.15 CISPEP 7 TYR B 397 PRO B 398 0 15.97 SITE 1 AC1 4 GLU A 557 ALA A 597 SER A 600 ALA A 602 SITE 1 AC2 1 PHE A 265 SITE 1 AC3 1 ASN A 390 SITE 1 AC4 14 GLY A 187 PHE A 188 LYS A 218 ASP A 297 SITE 2 AC4 14 ASP A 298 TYR A 335 THR A 366 VAL A 370 SITE 3 AC4 14 TRP A 394 ASN A 396 ASP A 401 TYR A 402 SITE 4 AC4 14 ASN A 429 ASP B 620 SITE 1 AC5 1 TYR B 456 SITE 1 AC6 1 LYS B 593 SITE 1 AC7 1 PHE B 265 SITE 1 AC8 14 LEU A 621 GLY B 187 PHE B 188 TYR B 189 SITE 2 AC8 14 LYS B 218 ASP B 297 ASP B 298 TYR B 335 SITE 3 AC8 14 THR B 366 VAL B 370 TRP B 394 ASN B 396 SITE 4 AC8 14 ASP B 401 ASN B 429 CRYST1 129.817 145.723 152.331 90.00 90.00 90.00 I 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007703 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006862 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006565 0.00000