HEADER TRANSPORT PROTEIN 12-MAR-09 2WCH TITLE STRUCTURE OF BMORI GOBP2 (GENERAL ODORANT BINDING PROTEIN 2) WITH TITLE 2 BOMBYKAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL ODORANT-BINDING PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 20-160; COMPND 5 SYNONYM: GENERAL ODORANT BINDING PROTEIN 2, GOBP2, GOBP1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: SILK MOTH; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 ORGAN: ANTENNA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS ODORANT BINDING PROTEIN, TRANSPORT PROTEIN, OLFACTION, TRANSPORT, KEYWDS 2 DISULFIDE BOND, INSECT PHEREMONE, SENSORY TRANSDUCTION EXPDTA X-RAY DIFFRACTION AUTHOR G.ROBERTSON,J.-J.ZHOU,X.HE,J.A.PICKETT,L.M.FIELD,N.H.KEEP REVDAT 2 13-DEC-23 2WCH 1 REMARK LINK REVDAT 1 11-AUG-09 2WCH 0 JRNL AUTH J.-J.ZHOU,G.ROBERTSON,X.HE,S.DUFOUR,A.M.HOOPER,J.A.PICKETT, JRNL AUTH 2 N.H.KEEP,L.M.FIELD JRNL TITL CHARACTERISATION OF BOMBYX MORI ODORANT-BINDING PROTEINS JRNL TITL 2 REVEALS THAT A GENERAL ODORANT-BINDING PROTEIN DISCRIMINATES JRNL TITL 3 BETWEEN SEX PHEROMONE COMPONENTS. JRNL REF J.MOL.BIOL. V. 389 529 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19371749 JRNL DOI 10.1016/J.JMB.2009.04.015 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0088 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 11989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 639 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 833 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1126 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.21000 REMARK 3 B22 (A**2) : -0.21000 REMARK 3 B33 (A**2) : 0.31000 REMARK 3 B12 (A**2) : -0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.085 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.496 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.878 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1235 ; 0.022 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1670 ; 1.858 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 157 ; 4.962 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;42.597 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 228 ;14.241 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;15.835 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 181 ; 0.128 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 940 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 745 ; 1.291 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1217 ; 2.219 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 490 ; 3.678 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 449 ; 6.196 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WCH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290039000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11977 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 43.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.22000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2WC5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 200MM MGCL2, 100MM TRIS REMARK 280 PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 114.92067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.46033 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.46033 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 114.92067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 110 O HOH A 2101 1.87 REMARK 500 OG SER A 26 O HOH A 2026 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 44 -20.38 -146.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2008 DISTANCE = 6.55 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 (10E,12Z)-HEXADECADIENAL (B7M): ALSO CALLED BOMBYKAL REMARK 600 MAGNESIUM (MG): CRYSTAL CONTACTS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1144 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 17 OE1 REMARK 620 2 GLU A 18 OE2 120.5 REMARK 620 3 HOH A2009 O 69.5 90.8 REMARK 620 4 HOH A2010 O 72.9 91.3 137.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1142 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 O REMARK 620 2 ASP A 28 O 176.0 REMARK 620 3 HOH A2018 O 86.4 90.6 REMARK 620 4 HOH A2023 O 91.1 86.8 96.7 REMARK 620 5 HOH A2029 O 83.6 100.1 159.7 101.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1143 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 39 OD2 REMARK 620 2 ASP A 106 OD1 168.4 REMARK 620 3 HOH A2097 O 86.1 84.7 REMARK 620 4 HOH A2098 O 101.0 72.0 90.1 REMARK 620 5 HOH A2114 O 100.9 88.4 173.0 89.1 REMARK 620 6 HOH A2115 O 98.6 89.5 96.5 159.8 82.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1146 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2002 O REMARK 620 2 HOH A2003 O 91.2 REMARK 620 3 HOH A2017 O 90.9 89.0 REMARK 620 4 HOH A2053 O 170.8 80.1 85.9 REMARK 620 5 HOH A2058 O 99.3 90.2 169.8 83.9 REMARK 620 6 HOH A2059 O 64.9 148.5 110.5 124.2 74.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1146 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1142 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1143 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1144 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B7M A 1145 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WCL RELATED DB: PDB REMARK 900 STRUCTURE OF BMORI GOBP2 (GENERAL ODORANT BINDING PROTEIN 2) WITH REMARK 900 (8E,10Z)- HEXADECADIEN-1-OL REMARK 900 RELATED ID: 2WC6 RELATED DB: PDB REMARK 900 STRUCTURE OF BMORI GOBP2 (GENERAL ODORANT BINDING PROTEIN 2) WITH REMARK 900 BOMBYKOL AND WATER TO ARG 110 REMARK 900 RELATED ID: 2WCK RELATED DB: PDB REMARK 900 STRUCTURE OF BMORI GOBP2 (GENERAL ODORANT BINDING PROTEIN 2) REMARK 900 WITHOUT LIGAND REMARK 900 RELATED ID: 2WCM RELATED DB: PDB REMARK 900 STRUCTURE OF BMORI GOBP2 (GENERAL ODORANT BINDING PROTEIN 2) WITH REMARK 900 (10E)-HEXADECEN-12- YN-1-OL REMARK 900 RELATED ID: 2WC5 RELATED DB: PDB REMARK 900 STRUCTURE OF BMORI GOBP2 (GENERAL ODORANT BINDING PROTEIN 2) REMARK 900 RELATED ID: 2WCJ RELATED DB: PDB REMARK 900 STRUCTURE OF BMORI GOBP2 (GENERAL ODORANT BINDING PROTEIN 2) WITH REMARK 900 (10E,12Z)- TETRADECADIEN-1-OL REMARK 999 REMARK 999 SEQUENCE REMARK 999 THREE POINT MUTATIONS DUE TO STRAIN DIFFERENCES. REMARK 999 THE CDNA USED FOR THIS EXPERIMENT WAS OBTAINED FROM REMARK 999 THE STRAIN DAZAO. REMARK 999 THE DIFFERENCES ARE NATURALLY OCCURING BETWEEN THE REMARK 999 STRAIN USED FOR THIS WORK AND THAT USED FOR P34170 REMARK 999 WHICH HAS THE SAME SEQUENCE FOR GOBP2 AS THE GENOME REMARK 999 SEQUENCED STRAIN P50 DBREF 2WCH A 1 141 UNP P34170 OBP1_BOMMO 20 160 SEQADV 2WCH SER A 79 UNP P34170 GLY 98 SEE REMARK 999 SEQADV 2WCH GLU A 120 UNP P34170 LYS 139 SEE REMARK 999 SEQADV 2WCH VAL A 134 UNP P34170 ILE 153 SEE REMARK 999 SEQRES 1 A 141 THR ALA GLU VAL MET SER HIS VAL THR ALA HIS PHE GLY SEQRES 2 A 141 LYS THR LEU GLU GLU CYS ARG GLU GLU SER GLY LEU SER SEQRES 3 A 141 VAL ASP ILE LEU ASP GLU PHE LYS HIS PHE TRP SER ASP SEQRES 4 A 141 ASP PHE ASP VAL VAL HIS ARG GLU LEU GLY CYS ALA ILE SEQRES 5 A 141 ILE CYS MET SER ASN LYS PHE SER LEU MET ASP ASP ASP SEQRES 6 A 141 VAL ARG MET HIS HIS VAL ASN MET ASP GLU TYR ILE LYS SEQRES 7 A 141 SER PHE PRO ASN GLY GLN VAL LEU ALA GLU LYS MET VAL SEQRES 8 A 141 LYS LEU ILE HIS ASN CYS GLU LYS GLN PHE ASP THR GLU SEQRES 9 A 141 THR ASP ASP CYS THR ARG VAL VAL LYS VAL ALA ALA CYS SEQRES 10 A 141 PHE LYS GLU ASP SER ARG LYS GLU GLY ILE ALA PRO GLU SEQRES 11 A 141 VAL ALA MET VAL GLU ALA VAL ILE GLU LYS TYR HET MG A1142 1 HET MG A1143 1 HET MG A1144 1 HET B7M A1145 17 HET MG A1146 1 HETNAM MG MAGNESIUM ION HETNAM B7M (10E,12Z)-HEXADECA-10,12-DIENAL FORMUL 2 MG 4(MG 2+) FORMUL 5 B7M C16 H28 O FORMUL 7 HOH *121(H2 O) HELIX 1 1 THR A 1 GLY A 13 1 13 HELIX 2 2 THR A 15 GLY A 24 1 10 HELIX 3 3 GLU A 32 SER A 38 5 7 HELIX 4 4 HIS A 45 PHE A 59 1 15 HELIX 5 5 HIS A 69 SER A 79 1 11 HELIX 6 6 GLY A 83 PHE A 101 1 19 HELIX 7 7 ASP A 106 GLU A 125 1 20 HELIX 8 8 GLU A 130 VAL A 137 1 8 SSBOND 1 CYS A 19 CYS A 54 1555 1555 2.03 SSBOND 2 CYS A 50 CYS A 108 1555 1555 2.09 SSBOND 3 CYS A 97 CYS A 117 1555 1555 2.12 LINK OE1 GLU A 17 MG MG A1144 4555 1555 2.60 LINK OE2 GLU A 18 MG MG A1144 1555 1555 2.32 LINK O GLU A 22 MG MG A1142 1555 1555 2.29 LINK O ASP A 28 MG MG A1142 4655 1555 2.49 LINK OD2 ASP A 39 MG MG A1143 1665 1555 2.32 LINK OD1 ASP A 106 MG MG A1143 1555 1555 2.20 LINK MG MG A1142 O HOH A2018 1555 1555 2.37 LINK MG MG A1142 O HOH A2023 1555 1555 2.29 LINK MG MG A1142 O HOH A2029 1555 4655 2.52 LINK MG MG A1143 O HOH A2097 1555 1555 2.18 LINK MG MG A1143 O HOH A2098 1555 1555 2.34 LINK MG MG A1143 O HOH A2114 1555 1665 2.02 LINK MG MG A1143 O HOH A2115 1555 1665 1.85 LINK MG MG A1144 O HOH A2009 1555 1555 2.46 LINK MG MG A1144 O HOH A2010 1555 4555 1.89 LINK MG MG A1146 O HOH A2002 1555 1665 2.06 LINK MG MG A1146 O HOH A2003 1555 1665 2.14 LINK MG MG A1146 O HOH A2017 1555 1555 2.07 LINK MG MG A1146 O HOH A2053 1555 1555 2.19 LINK MG MG A1146 O HOH A2058 1555 1555 2.54 LINK MG MG A1146 O HOH A2059 1555 1555 2.63 SITE 1 AC1 6 HOH A2002 HOH A2003 HOH A2017 HOH A2053 SITE 2 AC1 6 HOH A2058 HOH A2059 SITE 1 AC2 5 GLU A 22 ASP A 28 HOH A2018 HOH A2023 SITE 2 AC2 5 HOH A2029 SITE 1 AC3 6 ASP A 39 ASP A 106 HOH A2097 HOH A2098 SITE 2 AC3 6 HOH A2114 HOH A2115 SITE 1 AC4 4 GLU A 17 GLU A 18 HOH A2009 HOH A2010 SITE 1 AC5 7 VAL A 8 PHE A 12 SER A 56 MET A 73 SITE 2 AC5 7 GLU A 98 VAL A 114 HOH A2101 CRYST1 33.080 33.080 172.381 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030230 0.017453 0.000000 0.00000 SCALE2 0.000000 0.034906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005801 0.00000