HEADER HYDROLASE 18-MAR-09 2WCZ TITLE 1.6A RESOLUTION STRUCTURE OF ARCHAEOGLOBUS FULGIDUS HJC, A HOLLIDAY TITLE 2 JUNCTION RESOLVASE FROM AN ARCHAEAL HYPERTHERMOPHILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOLLIDAY JUNCTION RESOLVASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 2-136; COMPND 5 SYNONYM: HJC; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: THE WILD-TYPE PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 STRAIN: 4304; SOURCE 5 ATCC: 49558; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM12; SOURCE 10 OTHER_DETAILS: GERMAN COLLECTION OF MICROORGANISMS (DSM) KEYWDS TYPE II RESTRICTION ENDONUCLEASE, HYDROLASE, DNA BINDING PROTEIN, KEYWDS 2 HOLLIDAY JUNCTION RESOLVASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CAROLIS,C.KOEHLER,C.SAUTER,J.BASQUIN,D.SUCK,I.TOEROE REVDAT 2 13-DEC-23 2WCZ 1 REMARK REVDAT 1 24-MAR-09 2WCZ 0 JRNL AUTH C.CAROLIS,C.KOEHLER,C.SAUTER,J.BASQUIN,D.SUCK,I.TOEROE JRNL TITL 1.6 A RESOLUTION STRUCTURE OF ARCHAEOGLOBUS FULGIDUS HJC, A JRNL TITL 2 HOLLIDAY JUNCTION RESOLVASE FROM AN ARCHAEAL JRNL TITL 3 HYPERTHERMOPHILE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 27122 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.3048 - 3.5532 0.99 2948 156 0.1933 0.2453 REMARK 3 2 3.5532 - 2.8208 1.00 2756 133 0.1655 0.1952 REMARK 3 3 2.8208 - 2.4644 1.00 2702 158 0.1689 0.2145 REMARK 3 4 2.4644 - 2.2391 1.00 2647 157 0.1605 0.2171 REMARK 3 5 2.2391 - 2.0787 1.00 2609 162 0.1603 0.2084 REMARK 3 6 2.0787 - 1.9561 0.99 2643 140 0.1665 0.1934 REMARK 3 7 1.9561 - 1.8582 0.97 2555 133 0.1741 0.1946 REMARK 3 8 1.8582 - 1.7773 0.94 2480 117 0.1911 0.2293 REMARK 3 9 1.7773 - 1.7089 0.88 2300 122 0.2221 0.2610 REMARK 3 10 1.7089 - 1.6499 0.78 2096 108 0.2716 0.3197 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.45 REMARK 3 B_SOL : 64.46 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 1.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.91500 REMARK 3 B22 (A**2) : 2.91500 REMARK 3 B33 (A**2) : -5.83000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1967 REMARK 3 ANGLE : 1.028 2660 REMARK 3 CHIRALITY : 0.068 288 REMARK 3 PLANARITY : 0.004 341 REMARK 3 DIHEDRAL : 14.897 739 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 6:36) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4669 6.4672 27.0012 REMARK 3 T TENSOR REMARK 3 T11: 0.2659 T22: 0.2029 REMARK 3 T33: 0.2615 T12: -0.0244 REMARK 3 T13: -0.0381 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.9731 L22: 2.1528 REMARK 3 L33: 4.0286 L12: 1.6350 REMARK 3 L13: -1.3518 L23: 0.4551 REMARK 3 S TENSOR REMARK 3 S11: 0.0516 S12: 0.2029 S13: -0.5308 REMARK 3 S21: -0.0120 S22: -0.3115 S23: -0.2883 REMARK 3 S31: 0.6036 S32: -0.6472 S33: 0.1639 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 37:128) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8412 12.3656 38.7321 REMARK 3 T TENSOR REMARK 3 T11: 0.1433 T22: 0.0886 REMARK 3 T33: 0.1967 T12: -0.0065 REMARK 3 T13: -0.0003 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.1361 L22: 0.4920 REMARK 3 L33: 2.0083 L12: -0.3376 REMARK 3 L13: -0.6509 L23: 0.9099 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: -0.0002 S13: -0.1674 REMARK 3 S21: 0.0171 S22: 0.0027 S23: 0.0890 REMARK 3 S31: -0.0214 S32: -0.0539 S33: 0.0243 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN B AND RESID 9:33) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7920 3.4519 21.0743 REMARK 3 T TENSOR REMARK 3 T11: 0.3631 T22: 0.2447 REMARK 3 T33: 0.3122 T12: -0.0131 REMARK 3 T13: 0.0034 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 7.3328 L22: 0.0560 REMARK 3 L33: 2.1291 L12: -0.5158 REMARK 3 L13: -1.0242 L23: -0.1299 REMARK 3 S TENSOR REMARK 3 S11: -0.4497 S12: -0.6797 S13: -0.5859 REMARK 3 S21: -0.1363 S22: 0.2452 S23: -0.1101 REMARK 3 S31: 0.5648 S32: 0.2044 S33: 0.1948 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN B AND RESID 34:125) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4906 8.2054 8.1639 REMARK 3 T TENSOR REMARK 3 T11: 0.2821 T22: 0.1879 REMARK 3 T33: 0.2498 T12: -0.0358 REMARK 3 T13: 0.0339 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 1.1137 L22: 1.1183 REMARK 3 L33: 2.5973 L12: 0.3190 REMARK 3 L13: -0.0647 L23: 0.2783 REMARK 3 S TENSOR REMARK 3 S11: -0.0638 S12: 0.0599 S13: -0.2189 REMARK 3 S21: -0.1776 S22: -0.0186 S23: -0.0117 REMARK 3 S31: -0.2390 S32: 0.0409 S33: 0.0699 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: N-TERMINAL RESIDUES UPTO A5 AND B8, C REMARK 3 -TERMINAL RESIDUES FROM A129 AND B126 ARE DISORDERED. LOOP FROM REMARK 3 B28 TO B31 MISSING DUE TO LACK OF DENSITY RESIDUES A30-A33 HAVE REMARK 3 WEEK ELECTRON DENSITY, THEY HAVE BEEN MODELLED FROM A MUTANT REMARK 3 STRUCTURE 2WCW REMARK 4 REMARK 4 2WCZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290039107. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.931 REMARK 200 MONOCHROMATOR : SINGLE SILICON (111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : SINGLE SILICON (111) REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27133 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 10.85 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.6700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.46 REMARK 200 R MERGE FOR SHELL (I) : 0.69000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 1IPI, 1GEF REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 200MM MGCL2, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 181.67333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 90.83667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 90.83667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 181.67333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 THR A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 LYS A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 GLY A 5 REMARK 465 GLN A 129 REMARK 465 GLU A 130 REMARK 465 ARG A 131 REMARK 465 PHE A 132 REMARK 465 GLY A 133 REMARK 465 GLU A 134 REMARK 465 LYS A 135 REMARK 465 VAL A 136 REMARK 465 GLY B -2 REMARK 465 THR B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 LYS B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 GLY B 5 REMARK 465 THR B 6 REMARK 465 ARG B 7 REMARK 465 PHE B 8 REMARK 465 GLY B 28 REMARK 465 SER B 29 REMARK 465 GLY B 30 REMARK 465 VAL B 31 REMARK 465 LYS B 126 REMARK 465 PHE B 127 REMARK 465 PHE B 128 REMARK 465 GLN B 129 REMARK 465 GLU B 130 REMARK 465 ARG B 131 REMARK 465 PHE B 132 REMARK 465 GLY B 133 REMARK 465 GLU B 134 REMARK 465 LYS B 135 REMARK 465 VAL B 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 66 O HOH A 2050 1.93 REMARK 500 OE1 GLU A 111 O HOH A 2099 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2047 O HOH A 2092 5555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 29 -72.85 -51.04 REMARK 500 ASN A 106 -157.07 -139.23 REMARK 500 ASP A 110 -164.05 -111.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 CHLORIDE (CL): CHLORIDE ANION REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1130 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WCW RELATED DB: PDB REMARK 900 1.6A RESOLUTION STRUCTURE OF ARCHAEOGLOBUS FULGIDUS HJC, A HOLLIDAY REMARK 900 JUNCTION RESOLVASE FROM AN ARCHAEAL HYPERTHERMOPHILE REMARK 999 REMARK 999 SEQUENCE REMARK 999 G1, T2 (TEV PROTEASE SITE) AND G4 (NCOI RESTRICTION SITE) REMARK 999 ARE CLONING ARTIFACTS DBREF 2WCZ A -2 1 PDB 2WCZ 2WCZ -2 1 DBREF 2WCZ A 2 136 UNP O28314 O28314_ARCFU 2 136 DBREF 2WCZ B -2 1 PDB 2WCZ 2WCZ -2 1 DBREF 2WCZ B 2 136 UNP O28314 O28314_ARCFU 2 136 SEQRES 1 A 139 GLY THR MET GLY LYS SER LYS GLY THR ARG PHE GLU ARG SEQRES 2 A 139 ASP LEU LEU VAL GLU LEU TRP LYS ALA GLY PHE ALA ALA SEQRES 3 A 139 ILE ARG VAL ALA GLY SER GLY VAL SER PRO PHE PRO CYS SEQRES 4 A 139 PRO ASP ILE VAL ALA GLY ASN GLY ARG THR TYR LEU ALA SEQRES 5 A 139 ILE GLU VAL LYS MET ARG LYS GLU LEU PRO LEU TYR LEU SEQRES 6 A 139 SER ALA ASP GLU VAL GLU GLN LEU VAL THR PHE ALA ARG SEQRES 7 A 139 GLY PHE GLY ALA GLU ALA TYR VAL ALA LEU LYS LEU PRO SEQRES 8 A 139 ARG LYS LYS TRP ARG PHE PHE PRO VAL GLN MET LEU GLU SEQRES 9 A 139 ARG THR GLU LYS ASN PHE LYS ILE ASP GLU SER VAL TYR SEQRES 10 A 139 PRO LEU GLY LEU GLU ILE ALA GLU VAL ALA GLY LYS PHE SEQRES 11 A 139 PHE GLN GLU ARG PHE GLY GLU LYS VAL SEQRES 1 B 139 GLY THR MET GLY LYS SER LYS GLY THR ARG PHE GLU ARG SEQRES 2 B 139 ASP LEU LEU VAL GLU LEU TRP LYS ALA GLY PHE ALA ALA SEQRES 3 B 139 ILE ARG VAL ALA GLY SER GLY VAL SER PRO PHE PRO CYS SEQRES 4 B 139 PRO ASP ILE VAL ALA GLY ASN GLY ARG THR TYR LEU ALA SEQRES 5 B 139 ILE GLU VAL LYS MET ARG LYS GLU LEU PRO LEU TYR LEU SEQRES 6 B 139 SER ALA ASP GLU VAL GLU GLN LEU VAL THR PHE ALA ARG SEQRES 7 B 139 GLY PHE GLY ALA GLU ALA TYR VAL ALA LEU LYS LEU PRO SEQRES 8 B 139 ARG LYS LYS TRP ARG PHE PHE PRO VAL GLN MET LEU GLU SEQRES 9 B 139 ARG THR GLU LYS ASN PHE LYS ILE ASP GLU SER VAL TYR SEQRES 10 B 139 PRO LEU GLY LEU GLU ILE ALA GLU VAL ALA GLY LYS PHE SEQRES 11 B 139 PHE GLN GLU ARG PHE GLY GLU LYS VAL HET CL A1129 1 HET CL A1130 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *165(H2 O) HELIX 1 1 THR A 6 ALA A 19 1 14 HELIX 2 2 SER A 63 GLY A 78 1 16 HELIX 3 3 GLN A 98 LEU A 100 5 3 HELIX 4 4 VAL A 113 GLY A 117 5 5 HELIX 5 5 GLU A 119 LYS A 126 1 8 HELIX 6 6 GLU B 9 ALA B 19 1 11 HELIX 7 7 ALA B 64 GLY B 78 1 15 HELIX 8 8 GLN B 98 LEU B 100 5 3 HELIX 9 9 VAL B 113 GLY B 117 5 5 HELIX 10 10 GLU B 119 GLY B 125 1 7 SHEET 1 AA 5 ALA A 22 ARG A 25 0 SHEET 2 AA 5 ILE A 39 GLY A 42 -1 O VAL A 40 N ILE A 24 SHEET 3 AA 5 TYR A 47 MET A 54 -1 O LEU A 48 N ALA A 41 SHEET 4 AA 5 GLU A 80 LYS A 86 1 O GLU A 80 N ALA A 49 SHEET 5 AA 5 ARG A 93 PRO A 96 -1 O ARG A 93 N LEU A 85 SHEET 1 AB 3 LEU A 60 LEU A 62 0 SHEET 2 AB 3 ASN A 106 ILE A 109 -1 O PHE A 107 N LEU A 62 SHEET 3 AB 3 GLU A 101 THR A 103 -1 O GLU A 101 N LYS A 108 SHEET 1 BA 5 ALA B 22 ARG B 25 0 SHEET 2 BA 5 ILE B 39 GLY B 42 -1 O VAL B 40 N ILE B 24 SHEET 3 BA 5 TYR B 47 MET B 54 -1 O LEU B 48 N ALA B 41 SHEET 4 BA 5 GLU B 80 LYS B 86 1 O GLU B 80 N ALA B 49 SHEET 5 BA 5 ARG B 93 PRO B 96 -1 O ARG B 93 N LEU B 85 SHEET 1 BB 3 LEU B 60 SER B 63 0 SHEET 2 BB 3 ASN B 106 ILE B 109 -1 O PHE B 107 N LEU B 62 SHEET 3 BB 3 GLU B 101 ARG B 102 -1 O GLU B 101 N LYS B 108 CISPEP 1 LEU A 58 PRO A 59 0 1.49 CISPEP 2 LEU B 58 PRO B 59 0 -1.81 SITE 1 AC1 5 LYS A 90 ARG A 93 GLU A 101 ARG A 102 SITE 2 AC1 5 HOH A2076 SITE 1 AC2 2 MET A 54 ARG A 55 CRYST1 37.560 37.560 272.510 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026624 0.015371 0.000000 0.00000 SCALE2 0.000000 0.030743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003670 0.00000 MTRIX1 1 -0.780100 0.624900 0.031140 25.15000 1 MTRIX2 1 0.625600 0.779500 0.031710 -9.74700 1 MTRIX3 1 -0.004457 0.044220 -0.999000 46.65000 1