HEADER HYDROLASE 23-MAR-09 2WDB TITLE A FAMILY 32 CARBOHYDRATE-BINDING MODULE, FROM THE MU TOXIN PRODUCED BY TITLE 2 CLOSTRIDIUM PERFRINGENS, IN COMPLEX WITH BETA-D-GLCNAC-BETA(1,2) TITLE 3 MANNOSE CAVEAT 2WDB MAN E 1 HAS WRONG CHIRALITY AT ATOM C1 MAN F 1 HAS WRONG CAVEAT 2 2WDB CHIRALITY AT ATOM C1 MAN G 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 2WDB MAN H 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYALURONOGLUCOSAMINIDASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: RESIDUES 807-975; COMPND 5 SYNONYM: HYALURONIDASE, MU TOXIN, GH84A CBM32-2; COMPND 6 EC: 3.2.1.35; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PERFRINGENS; SOURCE 3 ORGANISM_TAXID: 1502; SOURCE 4 ATCC: 13124; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (STAR) DE3; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS FAMILY 32 CARBOHYDRATE BINDING MODULE, FAMILY 84 GLYCOSIDE HYDROLASE, KEYWDS 2 GLYCOSIDASE, HEXOSAMINIDASE, CLOSTRIDIUM PERFRINGENS, CBM, TOXIN, KEYWDS 3 SECRETED, VIRULENCE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR E.FICKO-BLEAN,A.B.BORASTON REVDAT 5 08-MAY-24 2WDB 1 REMARK HETSYN REVDAT 4 29-JUL-20 2WDB 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 23-JUN-09 2WDB 1 JRNL REVDAT 2 19-MAY-09 2WDB 1 JRNL REVDAT 1 05-MAY-09 2WDB 0 JRNL AUTH E.FICKO-BLEAN,A.B.BORASTON JRNL TITL N-ACETYLGLUCOSAMINE RECOGNITION BY A FAMILY 32 JRNL TITL 2 CARBOHYDRATE-BINDING MODULE FROM CLOSTRIDIUM PERFRINGENS JRNL TITL 3 NAGH. JRNL REF J.MOL.BIOL. V. 390 208 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19422833 JRNL DOI 10.1016/J.JMB.2009.04.066 REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 79.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 39677 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2110 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2904 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4498 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 108 REMARK 3 SOLVENT ATOMS : 476 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.43000 REMARK 3 B22 (A**2) : -0.43000 REMARK 3 B33 (A**2) : 0.65000 REMARK 3 B12 (A**2) : -0.22000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.192 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.137 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.964 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4673 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3117 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6328 ; 1.299 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7597 ; 0.782 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 567 ; 6.546 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 218 ;38.914 ;25.963 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 786 ;12.576 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ; 7.477 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 698 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5153 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 903 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 833 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3289 ; 0.190 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2220 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2491 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 422 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.118 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 34 ; 0.226 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.230 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2908 ; 0.811 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4479 ; 1.291 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2109 ; 1.508 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1849 ; 2.202 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WDB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290039145. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 113.15 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 39.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.970 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.23367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 88.46733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 88.46733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.23367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 784 REMARK 465 GLY A 785 REMARK 465 SER A 786 REMARK 465 SER A 787 REMARK 465 HIS A 788 REMARK 465 HIS A 789 REMARK 465 HIS A 790 REMARK 465 HIS A 791 REMARK 465 HIS A 792 REMARK 465 HIS A 793 REMARK 465 SER A 794 REMARK 465 SER A 795 REMARK 465 GLY A 796 REMARK 465 LEU A 797 REMARK 465 VAL A 798 REMARK 465 PRO A 799 REMARK 465 ARG A 800 REMARK 465 GLY A 801 REMARK 465 SER A 802 REMARK 465 HIS A 803 REMARK 465 MET A 804 REMARK 465 ALA A 805 REMARK 465 SER A 806 REMARK 465 ASP A 946 REMARK 465 GLU A 947 REMARK 465 LEU A 948 REMARK 465 GLU A 949 REMARK 465 ASN A 950 REMARK 465 ALA A 951 REMARK 465 GLY A 952 REMARK 465 ASN A 953 REMARK 465 LYS A 954 REMARK 465 GLU A 955 REMARK 465 ASN A 956 REMARK 465 VAL A 957 REMARK 465 TYR A 958 REMARK 465 THR A 959 REMARK 465 ASN A 960 REMARK 465 THR A 961 REMARK 465 GLU A 962 REMARK 465 LEU A 963 REMARK 465 ASP A 964 REMARK 465 LEU A 965 REMARK 465 LEU A 966 REMARK 465 SER A 967 REMARK 465 LEU A 968 REMARK 465 ALA A 969 REMARK 465 LYS A 970 REMARK 465 GLU A 971 REMARK 465 ASP A 972 REMARK 465 VAL A 973 REMARK 465 THR A 974 REMARK 465 LYS A 975 REMARK 465 MET B 784 REMARK 465 GLY B 785 REMARK 465 SER B 786 REMARK 465 SER B 787 REMARK 465 HIS B 788 REMARK 465 HIS B 789 REMARK 465 HIS B 790 REMARK 465 HIS B 791 REMARK 465 HIS B 792 REMARK 465 HIS B 793 REMARK 465 SER B 794 REMARK 465 SER B 795 REMARK 465 GLY B 796 REMARK 465 LEU B 797 REMARK 465 VAL B 798 REMARK 465 PRO B 799 REMARK 465 ARG B 800 REMARK 465 GLY B 801 REMARK 465 SER B 802 REMARK 465 HIS B 803 REMARK 465 ASN B 950 REMARK 465 ALA B 951 REMARK 465 GLY B 952 REMARK 465 ASN B 953 REMARK 465 LYS B 954 REMARK 465 GLU B 955 REMARK 465 ASN B 956 REMARK 465 VAL B 957 REMARK 465 TYR B 958 REMARK 465 THR B 959 REMARK 465 ASN B 960 REMARK 465 THR B 961 REMARK 465 GLU B 962 REMARK 465 LEU B 963 REMARK 465 ASP B 964 REMARK 465 LEU B 965 REMARK 465 LEU B 966 REMARK 465 SER B 967 REMARK 465 LEU B 968 REMARK 465 ALA B 969 REMARK 465 LYS B 970 REMARK 465 GLU B 971 REMARK 465 ASP B 972 REMARK 465 VAL B 973 REMARK 465 THR B 974 REMARK 465 LYS B 975 REMARK 465 MET C 784 REMARK 465 GLY C 785 REMARK 465 SER C 786 REMARK 465 SER C 787 REMARK 465 HIS C 788 REMARK 465 HIS C 789 REMARK 465 HIS C 790 REMARK 465 HIS C 791 REMARK 465 HIS C 792 REMARK 465 HIS C 793 REMARK 465 SER C 794 REMARK 465 SER C 795 REMARK 465 GLY C 796 REMARK 465 LEU C 797 REMARK 465 VAL C 798 REMARK 465 PRO C 799 REMARK 465 ARG C 800 REMARK 465 GLY C 801 REMARK 465 SER C 802 REMARK 465 HIS C 803 REMARK 465 MET C 804 REMARK 465 ALA C 805 REMARK 465 SER C 806 REMARK 465 LEU C 948 REMARK 465 GLU C 949 REMARK 465 ASN C 950 REMARK 465 ALA C 951 REMARK 465 GLY C 952 REMARK 465 ASN C 953 REMARK 465 LYS C 954 REMARK 465 GLU C 955 REMARK 465 ASN C 956 REMARK 465 VAL C 957 REMARK 465 TYR C 958 REMARK 465 THR C 959 REMARK 465 ASN C 960 REMARK 465 THR C 961 REMARK 465 GLU C 962 REMARK 465 LEU C 963 REMARK 465 ASP C 964 REMARK 465 LEU C 965 REMARK 465 LEU C 966 REMARK 465 SER C 967 REMARK 465 LEU C 968 REMARK 465 ALA C 969 REMARK 465 LYS C 970 REMARK 465 GLU C 971 REMARK 465 ASP C 972 REMARK 465 VAL C 973 REMARK 465 THR C 974 REMARK 465 LYS C 975 REMARK 465 MET D 784 REMARK 465 GLY D 785 REMARK 465 SER D 786 REMARK 465 SER D 787 REMARK 465 HIS D 788 REMARK 465 HIS D 789 REMARK 465 HIS D 790 REMARK 465 HIS D 791 REMARK 465 HIS D 792 REMARK 465 HIS D 793 REMARK 465 SER D 794 REMARK 465 SER D 795 REMARK 465 GLY D 796 REMARK 465 LEU D 797 REMARK 465 VAL D 798 REMARK 465 PRO D 799 REMARK 465 ARG D 800 REMARK 465 GLY D 801 REMARK 465 SER D 802 REMARK 465 HIS D 803 REMARK 465 MET D 804 REMARK 465 LEU D 948 REMARK 465 GLU D 949 REMARK 465 ASN D 950 REMARK 465 ALA D 951 REMARK 465 GLY D 952 REMARK 465 ASN D 953 REMARK 465 LYS D 954 REMARK 465 GLU D 955 REMARK 465 ASN D 956 REMARK 465 VAL D 957 REMARK 465 TYR D 958 REMARK 465 THR D 959 REMARK 465 ASN D 960 REMARK 465 THR D 961 REMARK 465 GLU D 962 REMARK 465 LEU D 963 REMARK 465 ASP D 964 REMARK 465 LEU D 965 REMARK 465 LEU D 966 REMARK 465 SER D 967 REMARK 465 LEU D 968 REMARK 465 ALA D 969 REMARK 465 LYS D 970 REMARK 465 GLU D 971 REMARK 465 ASP D 972 REMARK 465 VAL D 973 REMARK 465 THR D 974 REMARK 465 LYS D 975 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 820 CB CG REMARK 480 LYS A 857 CB CG CD CE NZ REMARK 480 ILE A 859 CG2 CD1 REMARK 480 LYS A 860 CE NZ REMARK 480 GLU A 891 OE2 REMARK 480 GLU A 916 CB CG CD REMARK 480 LYS A 922 CE NZ REMARK 480 GLU B 891 CB CG CD OE1 OE2 REMARK 480 GLU B 916 OE1 OE2 REMARK 480 LYS C 860 CD CE NZ REMARK 480 GLU C 916 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 MAN F 1 O5 NAG F 2 2.04 REMARK 500 O2 MAN G 1 O5 NAG G 2 2.06 REMARK 500 O2 MAN E 1 O5 NAG E 2 2.06 REMARK 500 O2 MAN H 1 O5 NAG H 2 2.07 REMARK 500 N ALA D 805 O HOH D 2001 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2082 O HOH C 2075 2655 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 820 CG GLU A 820 CD 0.832 REMARK 500 LYS A 860 CD LYS A 860 CE -0.298 REMARK 500 GLU A 916 CD GLU A 916 OE1 1.028 REMARK 500 GLU A 916 CD GLU A 916 OE2 0.761 REMARK 500 GLU B 916 CD GLU B 916 OE1 -0.117 REMARK 500 GLU B 916 CD GLU B 916 OE2 0.254 REMARK 500 LYS C 860 CG LYS C 860 CD -0.458 REMARK 500 GLU C 916 CB GLU C 916 CG -0.417 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 820 CG - CD - OE1 ANGL. DEV. = -28.5 DEGREES REMARK 500 GLU A 820 CG - CD - OE2 ANGL. DEV. = -72.0 DEGREES REMARK 500 ILE A 859 CB - CG1 - CD1 ANGL. DEV. = 18.2 DEGREES REMARK 500 LYS A 860 CD - CE - NZ ANGL. DEV. = -31.2 DEGREES REMARK 500 GLU A 891 OE1 - CD - OE2 ANGL. DEV. = -28.4 DEGREES REMARK 500 GLU A 891 CG - CD - OE2 ANGL. DEV. = 23.3 DEGREES REMARK 500 GLU A 916 OE1 - CD - OE2 ANGL. DEV. = -23.4 DEGREES REMARK 500 GLU A 916 CG - CD - OE1 ANGL. DEV. = 12.9 DEGREES REMARK 500 GLU B 916 OE1 - CD - OE2 ANGL. DEV. = -10.2 DEGREES REMARK 500 GLU B 916 CG - CD - OE1 ANGL. DEV. = 15.2 DEGREES REMARK 500 LYS C 860 CB - CG - CD ANGL. DEV. = 25.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 840 -152.36 -89.04 REMARK 500 SER A 939 -32.68 -135.13 REMARK 500 ASN B 825 -8.88 -59.82 REMARK 500 LEU B 840 -145.21 -93.13 REMARK 500 GLU B 891 -58.93 -128.68 REMARK 500 ASN B 933 59.18 -68.08 REMARK 500 GLU B 940 136.00 -170.66 REMARK 500 LEU C 840 -154.03 -85.55 REMARK 500 LEU D 840 -152.78 -97.20 REMARK 500 SER D 939 -35.06 -131.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLU A 820 0.17 SIDE CHAIN REMARK 500 GLU A 916 0.21 SIDE CHAIN REMARK 500 GLU B 916 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2014 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH A2102 DISTANCE = 8.99 ANGSTROMS REMARK 525 HOH C2040 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH D2042 DISTANCE = 9.60 ANGSTROMS REMARK 525 HOH D2102 DISTANCE = 6.39 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1948 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 825 O REMARK 620 2 ASP A 828 OD1 73.7 REMARK 620 3 ASP A 830 O 158.6 92.9 REMARK 620 4 THR A 833 O 85.6 130.2 90.9 REMARK 620 5 THR A 833 OG1 85.3 69.1 74.2 64.4 REMARK 620 6 SER A 939 O 87.0 145.1 112.5 75.0 139.1 REMARK 620 7 GLU A 940 OE1 104.2 75.7 88.0 154.1 139.2 81.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B1952 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 825 O REMARK 620 2 ASP B 828 OD1 80.8 REMARK 620 3 ASP B 830 O 172.9 95.0 REMARK 620 4 THR B 833 OG1 89.4 68.8 83.8 REMARK 620 5 THR B 833 O 89.7 140.5 90.0 72.9 REMARK 620 6 SER B 939 O 82.6 142.7 104.1 144.1 72.1 REMARK 620 7 GLU B 940 OE1 99.2 75.3 85.1 141.2 144.2 74.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C1950 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 825 O REMARK 620 2 ASP C 828 OD1 74.8 REMARK 620 3 ASP C 830 O 163.2 90.1 REMARK 620 4 THR C 833 O 92.8 140.8 94.6 REMARK 620 5 THR C 833 OG1 85.2 68.2 82.4 73.9 REMARK 620 6 SER C 939 O 85.7 143.3 111.0 69.5 141.7 REMARK 620 7 GLU C 940 OE1 102.5 74.8 79.9 144.4 138.7 79.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D1950 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 825 O REMARK 620 2 ASP D 828 OD1 72.3 REMARK 620 3 ASP D 830 O 166.2 95.5 REMARK 620 4 THR D 833 OG1 84.4 72.3 85.6 REMARK 620 5 THR D 833 O 98.0 142.7 87.8 71.0 REMARK 620 6 SER D 939 O 84.6 140.3 109.2 138.1 70.7 REMARK 620 7 GLU D 940 OE1 98.5 74.6 84.0 144.0 142.6 77.7 REMARK 620 N 1 2 3 4 5 6 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2W1Q RELATED DB: PDB REMARK 900 UNIQUE LIGAND BINDING SPECIFICITY FOR A FAMILY 32 CARBOHYDRATE- REMARK 900 BINDING MODULE FROM THE MU TOXIN PRODUCED BY CLOSTRIDIUM PERFRINGENS REMARK 900 RELATED ID: 2W1U RELATED DB: PDB REMARK 900 A FAMILY 32 CARBOHYDRATE-BINDING MODULE, FROM THE MU TOXIN PRODUCED REMARK 900 BY CLOSTRIDIUM PERFRINGENS, IN COMPLEX WITH BETA-D-GLCNAC- BETA(1,3) REMARK 900 GALNAC REMARK 900 RELATED ID: 2W1S RELATED DB: PDB REMARK 900 UNIQUE LIGAND BINDING SPECIFICITY OF A FAMILY 32 CARBOHYDRATE- REMARK 900 BINDING MODULE FROM THE MU TOXIN PRODUCED BY CLOSTRIDIUM PERFRINGENS DBREF 2WDB A 784 806 PDB 2WDB 2WDB 784 806 DBREF 2WDB A 807 975 UNP P26831 NAGH_CLOPE 807 975 DBREF 2WDB B 784 806 PDB 2WDB 2WDB 784 806 DBREF 2WDB B 807 975 UNP P26831 NAGH_CLOPE 807 975 DBREF 2WDB C 784 806 PDB 2WDB 2WDB 784 806 DBREF 2WDB C 807 975 UNP P26831 NAGH_CLOPE 807 975 DBREF 2WDB D 784 806 PDB 2WDB 2WDB 784 806 DBREF 2WDB D 807 975 UNP P26831 NAGH_CLOPE 807 975 SEQADV 2WDB VAL A 944 UNP P26831 ILE 944 CONFLICT SEQADV 2WDB VAL B 944 UNP P26831 ILE 944 CONFLICT SEQADV 2WDB VAL C 944 UNP P26831 ILE 944 CONFLICT SEQADV 2WDB VAL D 944 UNP P26831 ILE 944 CONFLICT SEQRES 1 A 192 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 192 LEU VAL PRO ARG GLY SER HIS MET ALA SER ASN PRO SER SEQRES 3 A 192 LEU ILE ARG SER GLU SER TRP GLN VAL TYR GLU GLY ASN SEQRES 4 A 192 GLU ALA ASN LEU LEU ASP GLY ASP ASP ASN THR GLY VAL SEQRES 5 A 192 TRP TYR LYS THR LEU ASN GLY ASP THR SER LEU ALA GLY SEQRES 6 A 192 GLU PHE ILE GLY LEU ASP LEU GLY LYS GLU ILE LYS LEU SEQRES 7 A 192 ASP GLY ILE ARG PHE VAL ILE GLY LYS ASN GLY GLY GLY SEQRES 8 A 192 SER SER ASP LYS TRP ASN LYS PHE LYS LEU GLU TYR SER SEQRES 9 A 192 LEU ASP ASN GLU SER TRP THR THR ILE LYS GLU TYR ASP SEQRES 10 A 192 LYS THR GLY ALA PRO ALA GLY LYS ASP VAL ILE GLU GLU SEQRES 11 A 192 SER PHE GLU THR PRO ILE SER ALA LYS TYR ILE ARG LEU SEQRES 12 A 192 THR ASN MET GLU ASN ILE ASN LYS TRP LEU THR PHE SER SEQRES 13 A 192 GLU PHE ALA ILE VAL SER ASP GLU LEU GLU ASN ALA GLY SEQRES 14 A 192 ASN LYS GLU ASN VAL TYR THR ASN THR GLU LEU ASP LEU SEQRES 15 A 192 LEU SER LEU ALA LYS GLU ASP VAL THR LYS SEQRES 1 B 192 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 192 LEU VAL PRO ARG GLY SER HIS MET ALA SER ASN PRO SER SEQRES 3 B 192 LEU ILE ARG SER GLU SER TRP GLN VAL TYR GLU GLY ASN SEQRES 4 B 192 GLU ALA ASN LEU LEU ASP GLY ASP ASP ASN THR GLY VAL SEQRES 5 B 192 TRP TYR LYS THR LEU ASN GLY ASP THR SER LEU ALA GLY SEQRES 6 B 192 GLU PHE ILE GLY LEU ASP LEU GLY LYS GLU ILE LYS LEU SEQRES 7 B 192 ASP GLY ILE ARG PHE VAL ILE GLY LYS ASN GLY GLY GLY SEQRES 8 B 192 SER SER ASP LYS TRP ASN LYS PHE LYS LEU GLU TYR SER SEQRES 9 B 192 LEU ASP ASN GLU SER TRP THR THR ILE LYS GLU TYR ASP SEQRES 10 B 192 LYS THR GLY ALA PRO ALA GLY LYS ASP VAL ILE GLU GLU SEQRES 11 B 192 SER PHE GLU THR PRO ILE SER ALA LYS TYR ILE ARG LEU SEQRES 12 B 192 THR ASN MET GLU ASN ILE ASN LYS TRP LEU THR PHE SER SEQRES 13 B 192 GLU PHE ALA ILE VAL SER ASP GLU LEU GLU ASN ALA GLY SEQRES 14 B 192 ASN LYS GLU ASN VAL TYR THR ASN THR GLU LEU ASP LEU SEQRES 15 B 192 LEU SER LEU ALA LYS GLU ASP VAL THR LYS SEQRES 1 C 192 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 192 LEU VAL PRO ARG GLY SER HIS MET ALA SER ASN PRO SER SEQRES 3 C 192 LEU ILE ARG SER GLU SER TRP GLN VAL TYR GLU GLY ASN SEQRES 4 C 192 GLU ALA ASN LEU LEU ASP GLY ASP ASP ASN THR GLY VAL SEQRES 5 C 192 TRP TYR LYS THR LEU ASN GLY ASP THR SER LEU ALA GLY SEQRES 6 C 192 GLU PHE ILE GLY LEU ASP LEU GLY LYS GLU ILE LYS LEU SEQRES 7 C 192 ASP GLY ILE ARG PHE VAL ILE GLY LYS ASN GLY GLY GLY SEQRES 8 C 192 SER SER ASP LYS TRP ASN LYS PHE LYS LEU GLU TYR SER SEQRES 9 C 192 LEU ASP ASN GLU SER TRP THR THR ILE LYS GLU TYR ASP SEQRES 10 C 192 LYS THR GLY ALA PRO ALA GLY LYS ASP VAL ILE GLU GLU SEQRES 11 C 192 SER PHE GLU THR PRO ILE SER ALA LYS TYR ILE ARG LEU SEQRES 12 C 192 THR ASN MET GLU ASN ILE ASN LYS TRP LEU THR PHE SER SEQRES 13 C 192 GLU PHE ALA ILE VAL SER ASP GLU LEU GLU ASN ALA GLY SEQRES 14 C 192 ASN LYS GLU ASN VAL TYR THR ASN THR GLU LEU ASP LEU SEQRES 15 C 192 LEU SER LEU ALA LYS GLU ASP VAL THR LYS SEQRES 1 D 192 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 D 192 LEU VAL PRO ARG GLY SER HIS MET ALA SER ASN PRO SER SEQRES 3 D 192 LEU ILE ARG SER GLU SER TRP GLN VAL TYR GLU GLY ASN SEQRES 4 D 192 GLU ALA ASN LEU LEU ASP GLY ASP ASP ASN THR GLY VAL SEQRES 5 D 192 TRP TYR LYS THR LEU ASN GLY ASP THR SER LEU ALA GLY SEQRES 6 D 192 GLU PHE ILE GLY LEU ASP LEU GLY LYS GLU ILE LYS LEU SEQRES 7 D 192 ASP GLY ILE ARG PHE VAL ILE GLY LYS ASN GLY GLY GLY SEQRES 8 D 192 SER SER ASP LYS TRP ASN LYS PHE LYS LEU GLU TYR SER SEQRES 9 D 192 LEU ASP ASN GLU SER TRP THR THR ILE LYS GLU TYR ASP SEQRES 10 D 192 LYS THR GLY ALA PRO ALA GLY LYS ASP VAL ILE GLU GLU SEQRES 11 D 192 SER PHE GLU THR PRO ILE SER ALA LYS TYR ILE ARG LEU SEQRES 12 D 192 THR ASN MET GLU ASN ILE ASN LYS TRP LEU THR PHE SER SEQRES 13 D 192 GLU PHE ALA ILE VAL SER ASP GLU LEU GLU ASN ALA GLY SEQRES 14 D 192 ASN LYS GLU ASN VAL TYR THR ASN THR GLU LEU ASP LEU SEQRES 15 D 192 LEU SER LEU ALA LYS GLU ASP VAL THR LYS HET MAN E 1 12 HET NAG E 2 14 HET MAN F 1 12 HET NAG F 2 14 HET MAN G 1 12 HET NAG G 2 14 HET MAN H 1 12 HET NAG H 2 14 HET CA A1948 1 HET CA B1952 1 HET CA C1950 1 HET CA D1950 1 HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 MAN 4(C6 H12 O6) FORMUL 5 NAG 4(C8 H15 N O6) FORMUL 9 CA 4(CA 2+) FORMUL 13 HOH *476(H2 O) HELIX 1 1 GLU A 823 LEU A 827 5 5 HELIX 2 2 THR A 839 THR A 844 1 6 HELIX 3 3 GLU B 823 LEU B 827 5 5 HELIX 4 4 THR B 839 THR B 844 1 6 HELIX 5 5 ASN C 822 LEU C 827 5 6 HELIX 6 6 THR C 839 THR C 844 1 6 HELIX 7 7 GLU D 823 LEU D 827 5 5 SHEET 1 AA 5 SER A 809 ARG A 812 0 SHEET 2 AA 5 PHE A 850 ILE A 868 -1 O GLY A 852 N ILE A 811 SHEET 3 AA 5 ASP A 909 ASN A 928 -1 O ASP A 909 N ILE A 868 SHEET 4 AA 5 LYS A 881 SER A 887 -1 O LYS A 883 N THR A 927 SHEET 5 AA 5 THR A 894 ASP A 900 -1 O THR A 894 N TYR A 886 SHEET 1 AB 5 SER A 809 ARG A 812 0 SHEET 2 AB 5 PHE A 850 ILE A 868 -1 O GLY A 852 N ILE A 811 SHEET 3 AB 5 LEU A 936 VAL A 944 -1 N SER A 939 O VAL A 867 SHEET 4 AB 5 VAL A 835 LYS A 838 -1 O VAL A 835 N PHE A 938 SHEET 5 AB 5 GLN A 817 GLY A 821 -1 O GLN A 817 N LYS A 838 SHEET 1 BA 5 SER B 809 ARG B 812 0 SHEET 2 BA 5 PHE B 850 ILE B 868 -1 O GLY B 852 N ILE B 811 SHEET 3 BA 5 ASP B 909 ASN B 928 -1 O ASP B 909 N ILE B 868 SHEET 4 BA 5 LYS B 881 SER B 887 -1 O LYS B 883 N THR B 927 SHEET 5 BA 5 TRP B 893 ASP B 900 -1 O THR B 894 N TYR B 886 SHEET 1 BB 5 SER B 809 ARG B 812 0 SHEET 2 BB 5 PHE B 850 ILE B 868 -1 O GLY B 852 N ILE B 811 SHEET 3 BB 5 LEU B 936 VAL B 944 -1 N SER B 939 O VAL B 867 SHEET 4 BB 5 VAL B 835 LYS B 838 -1 O VAL B 835 N PHE B 938 SHEET 5 BB 5 GLN B 817 GLY B 821 -1 O GLN B 817 N LYS B 838 SHEET 1 CA 5 SER C 809 ARG C 812 0 SHEET 2 CA 5 PHE C 850 ILE C 868 -1 O GLY C 852 N ILE C 811 SHEET 3 CA 5 ASP C 909 ASN C 928 -1 O ASP C 909 N ILE C 868 SHEET 4 CA 5 LYS C 881 SER C 887 -1 O LYS C 883 N THR C 927 SHEET 5 CA 5 THR C 894 ASP C 900 -1 O THR C 894 N TYR C 886 SHEET 1 CB 5 SER C 809 ARG C 812 0 SHEET 2 CB 5 PHE C 850 ILE C 868 -1 O GLY C 852 N ILE C 811 SHEET 3 CB 5 LEU C 936 VAL C 944 -1 N SER C 939 O VAL C 867 SHEET 4 CB 5 VAL C 835 LYS C 838 -1 O VAL C 835 N PHE C 938 SHEET 5 CB 5 GLN C 817 GLU C 820 -1 O GLN C 817 N LYS C 838 SHEET 1 DA10 SER D 809 ARG D 812 0 SHEET 2 DA10 PHE D 850 ILE D 868 -1 O GLY D 852 N ILE D 811 SHEET 3 DA10 GLN D 817 GLY D 821 0 SHEET 4 DA10 VAL D 835 LYS D 838 -1 O TRP D 836 N TYR D 819 SHEET 5 DA10 LEU D 936 VAL D 944 -1 O LEU D 936 N TYR D 837 SHEET 6 DA10 PHE D 850 ILE D 868 -1 N ASP D 862 O VAL D 944 SHEET 7 DA10 THR D 894 ASP D 900 0 SHEET 8 DA10 LYS D 881 SER D 887 -1 O PHE D 882 N TYR D 899 SHEET 9 DA10 ASP D 909 ASN D 928 -1 N LYS D 922 O SER D 887 SHEET 10 DA10 PHE D 850 ILE D 868 -1 O ILE D 851 N LEU D 926 LINK O2 MAN E 1 C1 NAG E 2 1555 1555 1.15 LINK O2 MAN F 1 C1 NAG F 2 1555 1555 1.19 LINK O2 MAN G 1 C1 NAG G 2 1555 1555 1.15 LINK O2 MAN H 1 C1 NAG H 2 1555 1555 1.18 LINK O ASN A 825 CA CA A1948 1555 1555 2.23 LINK OD1 ASP A 828 CA CA A1948 1555 1555 2.64 LINK O ASP A 830 CA CA A1948 1555 1555 2.29 LINK O THR A 833 CA CA A1948 1555 1555 2.35 LINK OG1 THR A 833 CA CA A1948 1555 1555 2.64 LINK O SER A 939 CA CA A1948 1555 1555 2.28 LINK OE1 GLU A 940 CA CA A1948 1555 1555 2.21 LINK O ASN B 825 CA CA B1952 1555 1555 2.24 LINK OD1 ASP B 828 CA CA B1952 1555 1555 2.50 LINK O ASP B 830 CA CA B1952 1555 1555 2.25 LINK OG1 THR B 833 CA CA B1952 1555 1555 2.44 LINK O THR B 833 CA CA B1952 1555 1555 2.44 LINK O SER B 939 CA CA B1952 1555 1555 2.45 LINK OE1 GLU B 940 CA CA B1952 1555 1555 2.39 LINK O ASN C 825 CA CA C1950 1555 1555 2.10 LINK OD1 ASP C 828 CA CA C1950 1555 1555 2.59 LINK O ASP C 830 CA CA C1950 1555 1555 2.24 LINK O THR C 833 CA CA C1950 1555 1555 2.44 LINK OG1 THR C 833 CA CA C1950 1555 1555 2.47 LINK O SER C 939 CA CA C1950 1555 1555 2.45 LINK OE1 GLU C 940 CA CA C1950 1555 1555 2.43 LINK O ASN D 825 CA CA D1950 1555 1555 2.12 LINK OD1 ASP D 828 CA CA D1950 1555 1555 2.42 LINK O ASP D 830 CA CA D1950 1555 1555 2.30 LINK OG1 THR D 833 CA CA D1950 1555 1555 2.44 LINK O THR D 833 CA CA D1950 1555 1555 2.58 LINK O SER D 939 CA CA D1950 1555 1555 2.43 LINK OE1 GLU D 940 CA CA D1950 1555 1555 2.23 CRYST1 91.276 91.276 132.701 90.00 90.00 120.00 P 31 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010956 0.006325 0.000000 0.00000 SCALE2 0.000000 0.012651 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007536 0.00000