HEADER HYDROLASE 24-MAR-09 2WDF TITLE TERMUS THERMOPHILUS SULFATE THIOHYDROLASE SOXB COMPND MOL_ID: 1; COMPND 2 MOLECULE: SULFUR OXIDATION PROTEIN SOXB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 24-573; COMPND 5 SYNONYM: SOXB; COMPND 6 EC: 3.12.2.1; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: THERMUS THERMOPHILUS HB27 SOXB SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 262724; SOURCE 4 STRAIN: HB27; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PQE80L; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVS048 KEYWDS HYDROLASE, SULFUR-SULFUR HYDROLYSIS, SULFUR OXIDATION PATHWAY, SOX, KEYWDS 2 SOXB, CYS S-THIOSULFONATE EXPDTA X-RAY DIFFRACTION AUTHOR V.SAUVE,P.ROVERSI,K.J.LEATH,E.F.GARMAN,R.ANTROBUS,S.M.LEA,B.C.BERKS REVDAT 5 13-DEC-23 2WDF 1 REMARK LINK REVDAT 4 05-JUL-17 2WDF 1 REMARK REVDAT 3 11-AUG-09 2WDF 1 JRNL REMARK MASTER REVDAT 2 30-JUN-09 2WDF 1 AUTHOR JRNL REVDAT 1 16-JUN-09 2WDF 0 JRNL AUTH V.SAUVE,P.ROVERSI,K.J.LEATH,E.F.GARMAN,R.ANTROBUS,S.M.LEA, JRNL AUTH 2 B.C.BERKS JRNL TITL MECHANISM FOR THE HYDROLYSIS OF A SULFUR-SULFUR BOND BASED JRNL TITL 2 ON THE CRYSTAL STRUCTURE OF THE THIOSULFOHYDROLASE SOXB. JRNL REF J.BIOL.CHEM. V. 284 21707 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19535341 JRNL DOI 10.1074/JBC.M109.002709 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.5.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 34616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1793 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 7 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.25 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.66 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 6398 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2211 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6060 REMARK 3 BIN R VALUE (WORKING SET) : 0.2182 REMARK 3 BIN FREE R VALUE : 0.2749 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.28 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 338 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4296 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 336 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.73301 REMARK 3 B22 (A**2) : 2.79378 REMARK 3 B33 (A**2) : -2.06076 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : NULL ; NULL ; NULL REMARK 3 BOND ANGLES : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : NULL ; NULL ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : NULL ; NULL ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : NULL ; NULL ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : NULL REMARK 3 OTHER TORSION ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. AUTOBUSTER BETA 2.5.1 DECEMBER 2008. NATIVE STRUCTURE REMARK 3 SUPPLEMENTED WITH MNCL2 TO ENSURE FULL OCCUPANCY OF THE MN IONS REMARK 4 REMARK 4 2WDF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290039186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MONTEL OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER SMART 6000 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XPREP REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32817 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 64.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2WDC REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5 MM TRISHCL PH 8.0, 0.1M NACL, 12-13% REMARK 280 T-BUTANOL, 0.05M TRIS-ACETAT PH 8.5, 1 MM MNCL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.18150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.56650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.35500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.56650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.18150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.35500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 12 REMARK 465 ALA A 13 REMARK 465 SER A 14 REMARK 465 TRP A 15 REMARK 465 SER A 16 REMARK 465 HIS A 17 REMARK 465 PRO A 18 REMARK 465 GLN A 19 REMARK 465 PHE A 20 REMARK 465 GLU A 21 REMARK 465 LYS A 22 REMARK 465 GLY A 23 REMARK 465 ALA A 24 REMARK 465 LEU A 25 REMARK 465 GLU A 26 REMARK 465 ASP A 27 REMARK 465 PRO A 28 REMARK 465 ARG A 29 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 405 C - N - CA ANGL. DEV. = 9.2 DEGREES REMARK 500 PRO A 469 C - N - CA ANGL. DEV. = 10.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 101 19.86 58.49 REMARK 500 VAL A 172 -169.70 -118.36 REMARK 500 HIS A 174 -86.03 -155.96 REMARK 500 SER A 197 122.75 -179.11 REMARK 500 HIS A 297 -48.55 76.61 REMARK 500 SER A 317 -147.69 54.11 REMARK 500 ALA A 319 17.60 57.82 REMARK 500 ASP A 386 154.23 171.50 REMARK 500 ARG A 552 73.21 -150.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2009 DISTANCE = 5.82 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 MANGANESE II ION (MN): SUPPLEMENTED AS 2 MM MNCL2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1575 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 47 OD1 REMARK 620 2 HIS A 49 NE2 116.8 REMARK 620 3 ASP A 143 OD2 86.5 87.6 REMARK 620 4 HIS A 299 NE2 90.0 99.4 172.9 REMARK 620 5 HOH A2336 O 103.1 136.5 77.7 97.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1576 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 143 OD2 REMARK 620 2 HIS A 174 ND1 101.7 REMARK 620 3 HIS A 274 NE2 90.4 103.6 REMARK 620 4 HIS A 297 ND1 161.7 94.4 94.1 REMARK 620 5 HOH A2336 O 75.7 132.3 123.9 87.2 REMARK 620 N 1 2 3 4 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TBU A 1574 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1575 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1576 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WDE RELATED DB: PDB REMARK 900 TERMUS THERMOPHILUS SULFATE THIOHYDROLASE SOXB IN COMPLEX WITH REMARK 900 THIOSULFATE REMARK 900 RELATED ID: 2WDC RELATED DB: PDB REMARK 900 TERMUS THERMOPHILUS SULFATE THIOHYDROLASE SOXB IN COMPLEX WITH REMARK 900 GLYCEROL REMARK 900 RELATED ID: 2WDD RELATED DB: PDB REMARK 900 TERMUS THERMOPHILUS SULFATE THIOHYDROLASE SOXB IN COMPLEX WITH REMARK 900 SULFATE REMARK 999 REMARK 999 SEQUENCE REMARK 999 STREP II TAG AT THE N-TERMINUS REPLACED THE TAT SIGNAL REMARK 999 PEPTIDE DBREF 2WDF A 12 23 PDB 2WDF 2WDF 12 23 DBREF 2WDF A 24 573 UNP Q72IT0 Q72IT0_THET2 24 573 SEQRES 1 A 562 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 562 LEU GLU ASP PRO ARG SER LEU TYR ASP LEU PRO PRO TYR SEQRES 3 A 562 GLY ASP ALA THR LEU LEU TYR PHE SER ASP LEU HIS GLY SEQRES 4 A 562 GLN ALA PHE PRO HIS TYR PHE MET GLU PRO PRO ASN LEU SEQRES 5 A 562 ILE ALA PRO LYS PRO LEU MET GLY ARG PRO GLY TYR LEU SEQRES 6 A 562 THR GLY GLU ALA ILE LEU ARG TYR TYR GLY VAL GLU ARG SEQRES 7 A 562 GLY THR PRO LEU ALA TYR LEU LEU SER TYR VAL ASP PHE SEQRES 8 A 562 VAL GLU LEU ALA ARG THR PHE GLY PRO ILE GLY GLY MET SEQRES 9 A 562 GLY ALA LEU THR ALA LEU ILE ARG ASP GLN LYS ALA ARG SEQRES 10 A 562 VAL GLU ALA GLU GLY GLY LYS ALA LEU VAL LEU ASP GLY SEQRES 11 A 562 GLY ASP THR TRP THR ASN SER GLY LEU SER LEU LEU THR SEQRES 12 A 562 ARG GLY GLU ALA VAL VAL ARG TRP GLN ASN LEU VAL GLY SEQRES 13 A 562 VAL ASP HIS MET VAL SER HIS TRP GLU TRP THR LEU GLY SEQRES 14 A 562 ARG GLU ARG VAL GLU GLU LEU LEU GLY LEU PHE ARG GLY SEQRES 15 A 562 GLU PHE LEU SER TYR ASN ILE VAL ASP ASP LEU PHE GLY SEQRES 16 A 562 ASP PRO LEU PHE PRO ALA TYR ARG ILE HIS ARG VAL GLY SEQRES 17 A 562 PRO TYR ALA LEU ALA VAL VAL GLY ALA SER TYR PRO TYR SEQRES 18 A 562 VAL LYS VAL SER HIS PRO GLU SER PHE THR GLU GLY LEU SEQRES 19 A 562 SER PHE ALA LEU ASP GLU ARG ARG LEU GLN GLU ALA VAL SEQRES 20 A 562 ASP LYS ALA ARG ALA GLU GLY ALA ASN ALA VAL VAL LEU SEQRES 21 A 562 LEU SER HIS ASN GLY MET GLN LEU ASP ALA ALA LEU ALA SEQRES 22 A 562 GLU ARG ILE ARG GLY ILE ASP LEU ILE LEU SER GLY HIS SEQRES 23 A 562 THR HIS ASP LEU THR PRO ARG PRO TRP ARG VAL GLY LYS SEQRES 24 A 562 THR TRP ILE VAL ALA GLY SER ALA ALA GLY LYS ALA LEU SEQRES 25 A 562 MET ARG VAL ASP LEU LYS LEU TRP LYS GLY GLY ILE ALA SEQRES 26 A 562 ASN LEU ARG VAL ARG VAL LEU PRO VAL LEU ALA GLU HIS SEQRES 27 A 562 LEU PRO LYS ALA GLU ASP VAL GLU ALA PHE LEU LYS ALA SEQRES 28 A 562 GLN LEU ALA PRO HIS GLN ASP HIS LEU PHE THR PRO LEU SEQRES 29 A 562 ALA VAL SER GLU THR LEU LEU TYR LYS ARG ASP THR LEU SEQRES 30 A 562 TYR SER THR TRP ASP GLN LEU VAL GLY GLU ALA VAL LYS SEQRES 31 A 562 ALA ILE TYR PRO GLU VAL GLU VAL VAL PHE SER PRO ALA SEQRES 32 A 562 VAL ARG TRP GLY THR THR ILE LEU PRO GLY GLN ALA ILE SEQRES 33 A 562 THR TRP ASP HIS LEU TYR ALA TYR THR GLY PHE THR TYR SEQRES 34 A 562 PRO GLU LEU TYR LEU PHE TYR LEU ARG GLY ALA GLN ILE SEQRES 35 A 562 LYS ALA VAL LEU GLU ASP ILE ALA SER ASN VAL PHE THR SEQRES 36 A 562 SER ASP PRO PHE TYR GLN GLN GLY GLY ASP VAL SER ARG SEQRES 37 A 562 VAL PHE GLY LEU ARG TYR VAL LEU ASP PRO ASP ALA PRO SEQRES 38 A 562 THR GLY GLU ARG VAL ARG GLU VAL GLU VAL GLY GLY ARG SEQRES 39 A 562 PRO LEU ASP PRO ASN ARG ARG TYR LEU ALA ALA ALA TYR SEQRES 40 A 562 GLY GLY ARG LEU GLN ARG VAL GLY GLU ALA LYS PRO GLY SEQRES 41 A 562 TYR GLU PRO ARG PRO ILE TYR GLU VAL LEU ALA GLU TYR SEQRES 42 A 562 LEU ARG SER VAL GLY ARG VAL ARG VAL ARG PRO GLU PRO SEQRES 43 A 562 ASN VAL LYS VAL ILE GLY ARG ASN TYR ARG LEU PRO GLU SEQRES 44 A 562 VAL THR GLY HET TBU A1574 5 HET MN A1575 1 HET MN A1576 1 HETNAM TBU TERTIARY-BUTYL ALCOHOL HETNAM MN MANGANESE (II) ION HETSYN TBU 2-METHYL-2-PROPANOL FORMUL 2 TBU C4 H10 O FORMUL 3 MN 2(MN 2+) FORMUL 5 HOH *336(H2 O) HELIX 1 1 PRO A 66 MET A 70 5 5 HELIX 2 2 THR A 77 GLY A 86 1 10 HELIX 3 3 THR A 91 SER A 98 1 8 HELIX 4 4 ASP A 101 GLY A 110 1 10 HELIX 5 5 GLY A 114 GLU A 132 1 19 HELIX 6 6 SER A 148 THR A 154 1 7 HELIX 7 7 GLY A 156 GLY A 167 1 12 HELIX 8 8 HIS A 174 LEU A 179 5 6 HELIX 9 9 GLY A 180 PHE A 191 1 12 HELIX 10 10 TYR A 232 HIS A 237 1 6 HELIX 11 11 PRO A 238 THR A 242 5 5 HELIX 12 12 ASP A 250 GLU A 264 1 15 HELIX 13 13 GLY A 276 GLU A 285 1 10 HELIX 14 14 ALA A 347 LEU A 350 5 4 HELIX 15 15 ALA A 353 ALA A 365 1 13 HELIX 16 16 HIS A 367 THR A 373 1 7 HELIX 17 17 SER A 390 TYR A 404 1 15 HELIX 18 18 TRP A 429 GLY A 437 1 9 HELIX 19 19 GLY A 450 PHE A 465 1 16 HELIX 20 20 ARG A 521 GLY A 526 5 6 HELIX 21 21 ILE A 537 GLY A 549 1 13 SHEET 1 AA 6 GLU A 194 PHE A 195 0 SHEET 2 AA 6 HIS A 170 MET A 171 1 N MET A 171 O GLU A 194 SHEET 3 AA 6 LYS A 135 ASP A 140 1 N ASP A 140 O HIS A 170 SHEET 4 AA 6 ALA A 40 PHE A 45 1 O THR A 41 N LEU A 137 SHEET 5 AA 6 ALA A 322 TRP A 331 -1 O MET A 324 N TYR A 44 SHEET 6 AA 6 GLY A 334 PRO A 344 -1 O GLY A 334 N TRP A 331 SHEET 1 AB 2 VAL A 201 ASP A 202 0 SHEET 2 AB 2 LEU A 245 SER A 246 -1 O SER A 246 N VAL A 201 SHEET 1 AC 6 TYR A 213 VAL A 218 0 SHEET 2 AC 6 TYR A 221 ALA A 228 -1 O TYR A 221 N VAL A 218 SHEET 3 AC 6 ALA A 268 SER A 273 1 O ALA A 268 N ALA A 224 SHEET 4 AC 6 LEU A 292 SER A 295 1 O LEU A 292 N LEU A 271 SHEET 5 AC 6 THR A 311 ALA A 315 1 O TRP A 312 N ILE A 293 SHEET 6 AC 6 TRP A 306 VAL A 308 -1 O TRP A 306 N ILE A 313 SHEET 1 AD 3 GLN A 425 THR A 428 0 SHEET 2 AD 3 PRO A 374 SER A 378 -1 N LEU A 375 O ILE A 427 SHEET 3 AD 3 ARG A 550 VAL A 551 1 N VAL A 551 O VAL A 377 SHEET 1 AE 5 ARG A 479 PHE A 481 0 SHEET 2 AE 5 VAL A 409 SER A 412 -1 O VAL A 410 N PHE A 481 SHEET 3 AE 5 ARG A 512 TYR A 518 1 O ALA A 516 N PHE A 411 SHEET 4 AE 5 GLU A 442 ARG A 449 -1 O TYR A 444 N ALA A 517 SHEET 5 AE 5 ARG A 535 PRO A 536 -1 O ARG A 535 N LEU A 443 SHEET 1 AF 5 ARG A 479 PHE A 481 0 SHEET 2 AF 5 VAL A 409 SER A 412 -1 O VAL A 410 N PHE A 481 SHEET 3 AF 5 ARG A 512 TYR A 518 1 O ALA A 516 N PHE A 411 SHEET 4 AF 5 GLU A 442 ARG A 449 -1 O TYR A 444 N ALA A 517 SHEET 5 AF 5 GLU A 527 ALA A 528 -1 O GLU A 527 N TYR A 447 SHEET 1 AG 4 ARG A 505 PRO A 506 0 SHEET 2 AG 4 VAL A 497 VAL A 502 -1 O VAL A 502 N ARG A 505 SHEET 3 AG 4 LEU A 483 LEU A 487 -1 O ARG A 484 N GLU A 501 SHEET 4 AG 4 VAL A 559 VAL A 561 1 O LYS A 560 N LEU A 487 LINK OD1 ASP A 47 MN MN A1575 1555 1555 2.12 LINK NE2 HIS A 49 MN MN A1575 1555 1555 2.30 LINK OD2 ASP A 143 MN MN A1575 1555 1555 2.29 LINK OD2 ASP A 143 MN MN A1576 1555 1555 2.21 LINK ND1 HIS A 174 MN MN A1576 1555 1555 2.21 LINK NE2 HIS A 274 MN MN A1576 1555 1555 2.21 LINK ND1 HIS A 297 MN MN A1576 1555 1555 2.38 LINK NE2 HIS A 299 MN MN A1575 1555 1555 2.32 LINK MN MN A1575 O HOH A2336 1555 1555 2.01 LINK MN MN A1576 O HOH A2336 1555 1555 2.20 SITE 1 AC1 2 ALA A 336 HIS A 349 SITE 1 AC2 6 ASP A 47 HIS A 49 ASP A 143 HIS A 299 SITE 2 AC2 6 MN A1576 HOH A2336 SITE 1 AC3 6 ASP A 143 HIS A 174 HIS A 274 HIS A 297 SITE 2 AC3 6 MN A1575 HOH A2336 CRYST1 70.363 86.710 95.133 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014212 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011533 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010512 0.00000