HEADER OXIDOREDUCTASE 27-MAR-09 2WDZ TITLE CRYSTAL STRUCTURE OF THE SHORT CHAIN DEHYDROGENASE GALACTITOL- TITLE 2 DEHYDROGENASE (GATDH) OF RHODOBACTER SPHAEROIDES IN COMPLEX WITH NAD+ TITLE 3 AND 1,2-PENTANDIOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: SHORT-CHAIN DEHYDROGENASE/REDUCTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GALACTITOL 2-DEHYDROGENASE; COMPND 5 EC: 1.1.1.16; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 3 ORGANISM_TAXID: 1063; SOURCE 4 STRAIN: D; SOURCE 5 ATCC: 17023; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24 KEYWDS OXIDOREDUCTASE, ROSSMANN FOLD EXPDTA X-RAY DIFFRACTION AUTHOR Y.CARIUS,H.CHRISTIAN,A.FAUST,P.KORNBERGER,G.W.KOHRING,F.GIFFHORN, AUTHOR 2 A.J.SCHEIDIG REVDAT 4 01-MAY-24 2WDZ 1 REMARK LINK REVDAT 3 30-JUN-10 2WDZ 1 JRNL REMARK REVDAT 2 05-MAY-10 2WDZ 1 JRNL REVDAT 1 31-MAR-10 2WDZ 0 JRNL AUTH Y.CARIUS,H.CHRISTIAN,A.FAUST,U.ZANDER,B.U.KLINK, JRNL AUTH 2 P.KORNBERGER,G.W.KOHRING,F.GIFFHORN,A.J.SCHEIDIG JRNL TITL STRUCTURAL INSIGHT INTO SUBSTRATE DIFFERENTIATION OF THE JRNL TITL 2 SUGAR-METABOLIZING ENZYME GALACTITOL DEHYDROGENASE FROM JRNL TITL 3 RHODOBACTER SPHAEROIDES D. JRNL REF J.BIOL.CHEM. V. 285 20006 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20410293 JRNL DOI 10.1074/JBC.M110.113738 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 60703 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3240 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4154 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 235 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 215 REMARK 3 SOLVENT ATOMS : 495 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.200 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.175 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.232 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7755 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5042 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10569 ; 1.690 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12013 ; 1.199 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1018 ; 6.141 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 295 ;38.156 ;22.068 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1127 ;15.447 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 79 ;19.792 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1231 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5847 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1645 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1631 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5531 ; 0.210 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3716 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 4081 ; 0.092 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 373 ; 0.168 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 66 ; 0.204 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 151 ; 0.282 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 35 ; 0.779 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WDZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1290038981. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : SILICON 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64019 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 8.900 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.69100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: SWISS PROT MODEL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM MES PH 5.5, 200MM MAGNESIUM REMARK 280 CHLORIDE, 12.5%(W/V)MPEG5000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 128.46250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 128.46250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.36000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.81000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.36000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.81000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 128.46250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.36000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 56.81000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 128.46250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.36000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 56.81000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -140.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -141.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 128.46250 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 255 LIES ON A SPECIAL POSITION. REMARK 375 MG MG B 255 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2145 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2146 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2114 LIES ON A SPECIAL POSITION. REMARK 375 HOH B2116 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 41 CD1 REMARK 470 ILE B 23 CD1 REMARK 470 ILE C 41 CD1 REMARK 470 ILE C 95 CD1 REMARK 470 ILE D 41 CD1 REMARK 470 ILE D 88 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2098 O HOH A 2099 1.38 REMARK 500 O HOH D 2025 O HOH D 2068 1.74 REMARK 500 NH1 ARG D 62 O1 1SP A 259 2.02 REMARK 500 O HOH A 2001 O HOH A 2002 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 2103 O HOH D 2106 3555 1.61 REMARK 500 O HOH A 2098 O HOH B 2080 4555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 62 C ILE A 63 N -0.142 REMARK 500 ARG B 62 C ILE B 63 N -0.139 REMARK 500 GLU B 79 CB GLU B 79 CG -0.132 REMARK 500 ILE B 139 C VAL B 140 N -0.147 REMARK 500 THR C 148 C ILE C 149 N -0.163 REMARK 500 GLY D 22 C ILE D 23 N -0.223 REMARK 500 GLU D 26 C ILE D 27 N -0.140 REMARK 500 LEU D 38 C ILE D 39 N -0.182 REMARK 500 ILE D 39 C LEU D 40 N -0.147 REMARK 500 ARG D 62 C ILE D 63 N -0.320 REMARK 500 GLY D 94 C ILE D 95 N -0.264 REMARK 500 ILE D 225 C ALA D 226 N -0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 142 CA - CB - CG ANGL. DEV. = -17.8 DEGREES REMARK 500 LEU B 142 CA - CB - CG ANGL. DEV. = -14.8 DEGREES REMARK 500 ILE D 63 O - C - N ANGL. DEV. = -12.7 DEGREES REMARK 500 GLY D 94 O - C - N ANGL. DEV. = -10.4 DEGREES REMARK 500 LEU D 142 CA - CB - CG ANGL. DEV. = -17.2 DEGREES REMARK 500 ASP D 248 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 103 56.44 -110.40 REMARK 500 ALA A 156 63.17 -157.77 REMARK 500 ALA A 193 81.52 -63.97 REMARK 500 ALA A 237 34.32 -95.84 REMARK 500 ASP B 42 148.07 -170.31 REMARK 500 VAL B 117 -59.89 -125.33 REMARK 500 ALA B 156 59.24 -164.82 REMARK 500 GLU B 205 -9.35 -54.37 REMARK 500 ALA C 156 70.22 -173.34 REMARK 500 ALA C 193 91.23 -64.49 REMARK 500 ALA C 237 32.98 -98.97 REMARK 500 ASP C 248 14.64 -140.47 REMARK 500 HIS D 99 137.01 -179.53 REMARK 500 VAL D 117 -61.16 -108.98 REMARK 500 SER D 144 147.45 -179.80 REMARK 500 ALA D 156 68.63 -160.76 REMARK 500 ALA D 188 78.05 -110.68 REMARK 500 GLU D 195 -57.30 -26.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2002 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A2015 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH B2007 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH B2008 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH C2014 DISTANCE = 5.95 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 255 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 254 OXT REMARK 620 2 TRP A 254 OXT 170.8 REMARK 620 3 HOH A2143 O 89.5 89.6 REMARK 620 4 HOH A2143 O 89.9 89.8 172.0 REMARK 620 5 HOH A2145 O 96.1 93.1 93.3 94.7 REMARK 620 6 HOH A2145 O 93.1 96.1 94.5 93.5 3.2 REMARK 620 7 HOH A2146 O 85.5 85.3 86.4 85.6 178.4 178.3 REMARK 620 8 HOH A2146 O 85.4 85.4 85.3 86.7 178.0 178.5 1.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 255 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP B 254 OXT REMARK 620 2 TRP B 254 OXT 175.5 REMARK 620 3 HOH B2111 O 84.4 95.5 REMARK 620 4 HOH B2111 O 95.7 84.1 175.7 REMARK 620 5 HOH B2114 O 93.2 91.3 93.1 91.3 REMARK 620 6 HOH B2114 O 91.6 92.9 91.4 93.0 2.2 REMARK 620 7 HOH B2116 O 88.2 87.3 87.6 88.0 178.5 179.0 REMARK 620 8 HOH B2116 O 87.5 88.0 88.1 87.6 178.7 179.0 0.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 256 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP C 254 OXT REMARK 620 2 HOH C2101 O 89.5 REMARK 620 3 HOH C2104 O 87.7 84.2 REMARK 620 4 HOH C2105 O 87.8 96.2 175.4 REMARK 620 5 HOH C2106 O 88.9 169.7 105.9 73.6 REMARK 620 6 TRP D 254 OXT 170.5 94.5 101.2 83.3 85.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 256 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP C 254 OXT REMARK 620 2 HOH C2101 O 90.9 REMARK 620 3 HOH C2104 O 88.9 83.6 REMARK 620 4 HOH C2105 O 89.8 96.5 178.7 REMARK 620 5 HOH C2106 O 91.1 170.5 105.7 74.2 REMARK 620 6 TRP D 254 OXT 171.9 92.5 98.8 82.4 84.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1SP A 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1SP A 259 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1SP B 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD C 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1SP C 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 256 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1SP D 258 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF THE PROTEIN FROM THE RHODOBACTER SPAEROIDES REMARK 999 STRAIN D DIFFERS FROM THAT OF STRAIN 2.4.1 IN THE REMARK 999 UNIPROT DATA BASE IN FIVE POSITIONS IN THE SEQUENCE: REMARK 999 G54A, E53Q, S61A, A79E, G208E. DBREF 2WDZ A 1 254 UNP Q3J3W2 Q3J3W2_RHOS4 1 254 DBREF 2WDZ B 1 254 UNP Q3J3W2 Q3J3W2_RHOS4 1 254 DBREF 2WDZ C 1 254 UNP Q3J3W2 Q3J3W2_RHOS4 1 254 DBREF 2WDZ D 1 254 UNP Q3J3W2 Q3J3W2_RHOS4 1 254 SEQADV 2WDZ ALA A 45 UNP Q3J3W2 GLY 45 SEE REMARK 999 SEQADV 2WDZ ALA B 45 UNP Q3J3W2 GLY 45 SEE REMARK 999 SEQADV 2WDZ ALA C 45 UNP Q3J3W2 GLY 45 SEE REMARK 999 SEQADV 2WDZ ALA D 45 UNP Q3J3W2 GLY 45 SEE REMARK 999 SEQADV 2WDZ GLN A 53 UNP Q3J3W2 GLU 53 SEE REMARK 999 SEQADV 2WDZ GLN B 53 UNP Q3J3W2 GLU 53 SEE REMARK 999 SEQADV 2WDZ GLN C 53 UNP Q3J3W2 GLU 53 SEE REMARK 999 SEQADV 2WDZ GLN D 53 UNP Q3J3W2 GLU 53 SEE REMARK 999 SEQADV 2WDZ ALA A 61 UNP Q3J3W2 SER 61 SEE REMARK 999 SEQADV 2WDZ ALA B 61 UNP Q3J3W2 SER 61 SEE REMARK 999 SEQADV 2WDZ ALA C 61 UNP Q3J3W2 SER 61 SEE REMARK 999 SEQADV 2WDZ ALA D 61 UNP Q3J3W2 SER 61 SEE REMARK 999 SEQADV 2WDZ GLU A 79 UNP Q3J3W2 ALA 79 SEE REMARK 999 SEQADV 2WDZ GLU B 79 UNP Q3J3W2 ALA 79 SEE REMARK 999 SEQADV 2WDZ GLU C 79 UNP Q3J3W2 ALA 79 SEE REMARK 999 SEQADV 2WDZ GLU D 79 UNP Q3J3W2 ALA 79 SEE REMARK 999 SEQADV 2WDZ GLU A 208 UNP Q3J3W2 GLY 208 SEE REMARK 999 SEQADV 2WDZ GLU B 208 UNP Q3J3W2 GLY 208 SEE REMARK 999 SEQADV 2WDZ GLU C 208 UNP Q3J3W2 GLY 208 SEE REMARK 999 SEQADV 2WDZ GLU D 208 UNP Q3J3W2 GLY 208 SEE REMARK 999 SEQRES 1 A 254 MET ASP TYR ARG THR VAL PHE ARG LEU ASP GLY ALA CYS SEQRES 2 A 254 ALA ALA VAL THR GLY ALA GLY SER GLY ILE GLY LEU GLU SEQRES 3 A 254 ILE CYS ARG ALA PHE ALA ALA SER GLY ALA ARG LEU ILE SEQRES 4 A 254 LEU ILE ASP ARG GLU ALA ALA ALA LEU ASP ARG ALA ALA SEQRES 5 A 254 GLN GLU LEU GLY ALA ALA VAL ALA ALA ARG ILE VAL ALA SEQRES 6 A 254 ASP VAL THR ASP ALA GLU ALA MET THR ALA ALA ALA ALA SEQRES 7 A 254 GLU ALA GLU ALA VAL ALA PRO VAL SER ILE LEU VAL ASN SEQRES 8 A 254 SER ALA GLY ILE ALA ARG LEU HIS ASP ALA LEU GLU THR SEQRES 9 A 254 ASP ASP ALA THR TRP ARG GLN VAL MET ALA VAL ASN VAL SEQRES 10 A 254 ASP GLY MET PHE TRP ALA SER ARG ALA PHE GLY ARG ALA SEQRES 11 A 254 MET VAL ALA ARG GLY ALA GLY ALA ILE VAL ASN LEU GLY SEQRES 12 A 254 SER MET SER GLY THR ILE VAL ASN ARG PRO GLN PHE ALA SEQRES 13 A 254 SER SER TYR MET ALA SER LYS GLY ALA VAL HIS GLN LEU SEQRES 14 A 254 THR ARG ALA LEU ALA ALA GLU TRP ALA GLY ARG GLY VAL SEQRES 15 A 254 ARG VAL ASN ALA LEU ALA PRO GLY TYR VAL ALA THR GLU SEQRES 16 A 254 MET THR LEU LYS MET ARG GLU ARG PRO GLU LEU PHE GLU SEQRES 17 A 254 THR TRP LEU ASP MET THR PRO MET GLY ARG CYS GLY GLU SEQRES 18 A 254 PRO SER GLU ILE ALA ALA ALA ALA LEU PHE LEU ALA SER SEQRES 19 A 254 PRO ALA ALA SER TYR VAL THR GLY ALA ILE LEU ALA VAL SEQRES 20 A 254 ASP GLY GLY TYR THR VAL TRP SEQRES 1 B 254 MET ASP TYR ARG THR VAL PHE ARG LEU ASP GLY ALA CYS SEQRES 2 B 254 ALA ALA VAL THR GLY ALA GLY SER GLY ILE GLY LEU GLU SEQRES 3 B 254 ILE CYS ARG ALA PHE ALA ALA SER GLY ALA ARG LEU ILE SEQRES 4 B 254 LEU ILE ASP ARG GLU ALA ALA ALA LEU ASP ARG ALA ALA SEQRES 5 B 254 GLN GLU LEU GLY ALA ALA VAL ALA ALA ARG ILE VAL ALA SEQRES 6 B 254 ASP VAL THR ASP ALA GLU ALA MET THR ALA ALA ALA ALA SEQRES 7 B 254 GLU ALA GLU ALA VAL ALA PRO VAL SER ILE LEU VAL ASN SEQRES 8 B 254 SER ALA GLY ILE ALA ARG LEU HIS ASP ALA LEU GLU THR SEQRES 9 B 254 ASP ASP ALA THR TRP ARG GLN VAL MET ALA VAL ASN VAL SEQRES 10 B 254 ASP GLY MET PHE TRP ALA SER ARG ALA PHE GLY ARG ALA SEQRES 11 B 254 MET VAL ALA ARG GLY ALA GLY ALA ILE VAL ASN LEU GLY SEQRES 12 B 254 SER MET SER GLY THR ILE VAL ASN ARG PRO GLN PHE ALA SEQRES 13 B 254 SER SER TYR MET ALA SER LYS GLY ALA VAL HIS GLN LEU SEQRES 14 B 254 THR ARG ALA LEU ALA ALA GLU TRP ALA GLY ARG GLY VAL SEQRES 15 B 254 ARG VAL ASN ALA LEU ALA PRO GLY TYR VAL ALA THR GLU SEQRES 16 B 254 MET THR LEU LYS MET ARG GLU ARG PRO GLU LEU PHE GLU SEQRES 17 B 254 THR TRP LEU ASP MET THR PRO MET GLY ARG CYS GLY GLU SEQRES 18 B 254 PRO SER GLU ILE ALA ALA ALA ALA LEU PHE LEU ALA SER SEQRES 19 B 254 PRO ALA ALA SER TYR VAL THR GLY ALA ILE LEU ALA VAL SEQRES 20 B 254 ASP GLY GLY TYR THR VAL TRP SEQRES 1 C 254 MET ASP TYR ARG THR VAL PHE ARG LEU ASP GLY ALA CYS SEQRES 2 C 254 ALA ALA VAL THR GLY ALA GLY SER GLY ILE GLY LEU GLU SEQRES 3 C 254 ILE CYS ARG ALA PHE ALA ALA SER GLY ALA ARG LEU ILE SEQRES 4 C 254 LEU ILE ASP ARG GLU ALA ALA ALA LEU ASP ARG ALA ALA SEQRES 5 C 254 GLN GLU LEU GLY ALA ALA VAL ALA ALA ARG ILE VAL ALA SEQRES 6 C 254 ASP VAL THR ASP ALA GLU ALA MET THR ALA ALA ALA ALA SEQRES 7 C 254 GLU ALA GLU ALA VAL ALA PRO VAL SER ILE LEU VAL ASN SEQRES 8 C 254 SER ALA GLY ILE ALA ARG LEU HIS ASP ALA LEU GLU THR SEQRES 9 C 254 ASP ASP ALA THR TRP ARG GLN VAL MET ALA VAL ASN VAL SEQRES 10 C 254 ASP GLY MET PHE TRP ALA SER ARG ALA PHE GLY ARG ALA SEQRES 11 C 254 MET VAL ALA ARG GLY ALA GLY ALA ILE VAL ASN LEU GLY SEQRES 12 C 254 SER MET SER GLY THR ILE VAL ASN ARG PRO GLN PHE ALA SEQRES 13 C 254 SER SER TYR MET ALA SER LYS GLY ALA VAL HIS GLN LEU SEQRES 14 C 254 THR ARG ALA LEU ALA ALA GLU TRP ALA GLY ARG GLY VAL SEQRES 15 C 254 ARG VAL ASN ALA LEU ALA PRO GLY TYR VAL ALA THR GLU SEQRES 16 C 254 MET THR LEU LYS MET ARG GLU ARG PRO GLU LEU PHE GLU SEQRES 17 C 254 THR TRP LEU ASP MET THR PRO MET GLY ARG CYS GLY GLU SEQRES 18 C 254 PRO SER GLU ILE ALA ALA ALA ALA LEU PHE LEU ALA SER SEQRES 19 C 254 PRO ALA ALA SER TYR VAL THR GLY ALA ILE LEU ALA VAL SEQRES 20 C 254 ASP GLY GLY TYR THR VAL TRP SEQRES 1 D 254 MET ASP TYR ARG THR VAL PHE ARG LEU ASP GLY ALA CYS SEQRES 2 D 254 ALA ALA VAL THR GLY ALA GLY SER GLY ILE GLY LEU GLU SEQRES 3 D 254 ILE CYS ARG ALA PHE ALA ALA SER GLY ALA ARG LEU ILE SEQRES 4 D 254 LEU ILE ASP ARG GLU ALA ALA ALA LEU ASP ARG ALA ALA SEQRES 5 D 254 GLN GLU LEU GLY ALA ALA VAL ALA ALA ARG ILE VAL ALA SEQRES 6 D 254 ASP VAL THR ASP ALA GLU ALA MET THR ALA ALA ALA ALA SEQRES 7 D 254 GLU ALA GLU ALA VAL ALA PRO VAL SER ILE LEU VAL ASN SEQRES 8 D 254 SER ALA GLY ILE ALA ARG LEU HIS ASP ALA LEU GLU THR SEQRES 9 D 254 ASP ASP ALA THR TRP ARG GLN VAL MET ALA VAL ASN VAL SEQRES 10 D 254 ASP GLY MET PHE TRP ALA SER ARG ALA PHE GLY ARG ALA SEQRES 11 D 254 MET VAL ALA ARG GLY ALA GLY ALA ILE VAL ASN LEU GLY SEQRES 12 D 254 SER MET SER GLY THR ILE VAL ASN ARG PRO GLN PHE ALA SEQRES 13 D 254 SER SER TYR MET ALA SER LYS GLY ALA VAL HIS GLN LEU SEQRES 14 D 254 THR ARG ALA LEU ALA ALA GLU TRP ALA GLY ARG GLY VAL SEQRES 15 D 254 ARG VAL ASN ALA LEU ALA PRO GLY TYR VAL ALA THR GLU SEQRES 16 D 254 MET THR LEU LYS MET ARG GLU ARG PRO GLU LEU PHE GLU SEQRES 17 D 254 THR TRP LEU ASP MET THR PRO MET GLY ARG CYS GLY GLU SEQRES 18 D 254 PRO SER GLU ILE ALA ALA ALA ALA LEU PHE LEU ALA SER SEQRES 19 D 254 PRO ALA ALA SER TYR VAL THR GLY ALA ILE LEU ALA VAL SEQRES 20 D 254 ASP GLY GLY TYR THR VAL TRP HET MG A 255 1 HET NAD A 257 44 HET 1SP A 258 7 HET 1SP A 259 7 HET MG B 255 1 HET NAD B 257 44 HET 1SP B 258 7 HET MG C 256 1 HET NAD C 257 44 HET 1SP C 258 7 HET MG D 256 1 HET NAD D 257 44 HET 1SP D 258 7 HETNAM MG MAGNESIUM ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 1SP (2S)-PENTANE-1,2-DIOL FORMUL 5 MG 4(MG 2+) FORMUL 6 NAD 4(C21 H27 N7 O14 P2) FORMUL 7 1SP 5(C5 H12 O2) FORMUL 18 HOH *495(H2 O) HELIX 1 1 SER A 21 SER A 34 1 14 HELIX 2 2 GLU A 44 GLY A 56 1 13 HELIX 3 3 ASP A 69 ALA A 84 1 16 HELIX 4 4 ASP A 100 THR A 104 5 5 HELIX 5 5 ASP A 105 VAL A 117 1 13 HELIX 6 6 VAL A 117 GLY A 135 1 19 HELIX 7 7 SER A 144 THR A 148 5 5 HELIX 8 8 ALA A 156 ALA A 178 1 23 HELIX 9 9 THR A 194 MET A 196 5 3 HELIX 10 10 THR A 197 GLU A 202 1 6 HELIX 11 11 ARG A 203 MET A 213 1 11 HELIX 12 12 GLU A 221 SER A 234 1 14 HELIX 13 13 PRO A 235 SER A 238 5 4 HELIX 14 14 GLY A 250 TRP A 254 5 5 HELIX 15 15 SER B 21 SER B 34 1 14 HELIX 16 16 GLU B 44 GLY B 56 1 13 HELIX 17 17 ASP B 69 ALA B 84 1 16 HELIX 18 18 ASP B 100 THR B 104 5 5 HELIX 19 19 ASP B 105 VAL B 117 1 13 HELIX 20 20 VAL B 117 GLY B 135 1 19 HELIX 21 21 SER B 144 THR B 148 5 5 HELIX 22 22 ALA B 156 ALA B 178 1 23 HELIX 23 23 THR B 194 MET B 196 5 3 HELIX 24 24 THR B 197 GLU B 202 1 6 HELIX 25 25 ARG B 203 MET B 213 1 11 HELIX 26 26 GLU B 221 SER B 234 1 14 HELIX 27 27 PRO B 235 SER B 238 5 4 HELIX 28 28 SER C 21 SER C 34 1 14 HELIX 29 29 GLU C 44 GLY C 56 1 13 HELIX 30 30 ASP C 69 ALA C 84 1 16 HELIX 31 31 ASP C 100 THR C 104 5 5 HELIX 32 32 ASP C 105 VAL C 117 1 13 HELIX 33 33 VAL C 117 GLY C 135 1 19 HELIX 34 34 SER C 144 THR C 148 5 5 HELIX 35 35 ALA C 156 ALA C 178 1 23 HELIX 36 36 THR C 194 MET C 196 5 3 HELIX 37 37 THR C 197 GLU C 202 1 6 HELIX 38 38 ARG C 203 MET C 213 1 11 HELIX 39 39 GLU C 221 SER C 234 1 14 HELIX 40 40 PRO C 235 SER C 238 5 4 HELIX 41 41 GLY C 250 TRP C 254 5 5 HELIX 42 42 SER D 21 SER D 34 1 14 HELIX 43 43 GLU D 44 GLY D 56 1 13 HELIX 44 44 ASP D 69 ALA D 84 1 16 HELIX 45 45 ASP D 100 THR D 104 5 5 HELIX 46 46 ASP D 105 VAL D 117 1 13 HELIX 47 47 VAL D 117 ARG D 134 1 18 HELIX 48 48 SER D 144 THR D 148 5 5 HELIX 49 49 ALA D 156 GLY D 179 1 24 HELIX 50 50 THR D 194 MET D 196 5 3 HELIX 51 51 THR D 197 GLU D 202 1 6 HELIX 52 52 ARG D 203 MET D 213 1 11 HELIX 53 53 GLU D 221 SER D 234 1 14 HELIX 54 54 PRO D 235 SER D 238 5 4 HELIX 55 55 GLY D 250 TRP D 254 5 5 SHEET 1 AA 7 VAL A 59 VAL A 64 0 SHEET 2 AA 7 ARG A 37 ASP A 42 1 O LEU A 38 N ALA A 60 SHEET 3 AA 7 CYS A 13 THR A 17 1 O ALA A 14 N ILE A 39 SHEET 4 AA 7 ILE A 88 ASN A 91 1 O ILE A 88 N ALA A 15 SHEET 5 AA 7 GLY A 137 LEU A 142 1 O ALA A 138 N LEU A 89 SHEET 6 AA 7 VAL A 182 PRO A 189 1 O ARG A 183 N ILE A 139 SHEET 7 AA 7 ILE A 244 VAL A 247 1 O LEU A 245 N ALA A 188 SHEET 1 BA 7 VAL B 59 VAL B 64 0 SHEET 2 BA 7 ARG B 37 ASP B 42 1 O LEU B 38 N ALA B 60 SHEET 3 BA 7 CYS B 13 THR B 17 1 O ALA B 14 N ILE B 39 SHEET 4 BA 7 ILE B 88 ASN B 91 1 O ILE B 88 N ALA B 15 SHEET 5 BA 7 GLY B 137 LEU B 142 1 O ALA B 138 N LEU B 89 SHEET 6 BA 7 VAL B 182 PRO B 189 1 O ARG B 183 N ILE B 139 SHEET 7 BA 7 ILE B 244 VAL B 247 1 O LEU B 245 N ALA B 188 SHEET 1 CA 7 VAL C 59 VAL C 64 0 SHEET 2 CA 7 ARG C 37 ASP C 42 1 O LEU C 38 N ALA C 60 SHEET 3 CA 7 CYS C 13 THR C 17 1 O ALA C 14 N ILE C 39 SHEET 4 CA 7 ILE C 88 ASN C 91 1 O ILE C 88 N ALA C 15 SHEET 5 CA 7 GLY C 137 LEU C 142 1 O ALA C 138 N LEU C 89 SHEET 6 CA 7 VAL C 182 PRO C 189 1 O ARG C 183 N ILE C 139 SHEET 7 CA 7 ILE C 244 VAL C 247 1 O LEU C 245 N ALA C 188 SHEET 1 DA 7 VAL D 59 VAL D 64 0 SHEET 2 DA 7 ARG D 37 ASP D 42 1 O LEU D 38 N ALA D 60 SHEET 3 DA 7 CYS D 13 THR D 17 1 O ALA D 14 N ILE D 39 SHEET 4 DA 7 ILE D 88 ASN D 91 1 O ILE D 88 N ALA D 15 SHEET 5 DA 7 GLY D 137 LEU D 142 1 O ALA D 138 N LEU D 89 SHEET 6 DA 7 VAL D 182 PRO D 189 1 O ARG D 183 N ILE D 139 SHEET 7 DA 7 ILE D 244 VAL D 247 1 O LEU D 245 N ALA D 188 LINK OXT TRP A 254 MG MG A 255 4555 1555 1.97 LINK OXT TRP A 254 MG MG A 255 1555 1555 1.97 LINK MG MG A 255 O HOH A2143 1555 1555 2.28 LINK MG MG A 255 O HOH A2143 1555 4555 2.27 LINK MG MG A 255 O HOH A2145 1555 1555 2.62 LINK MG MG A 255 O HOH A2145 1555 4555 2.62 LINK MG MG A 255 O HOH A2146 1555 1555 2.38 LINK MG MG A 255 O HOH A2146 1555 4555 2.38 LINK OXT TRP B 254 MG MG B 255 1555 1555 2.23 LINK OXT TRP B 254 MG MG B 255 4555 1555 2.24 LINK MG MG B 255 O HOH B2111 1555 1555 2.24 LINK MG MG B 255 O HOH B2111 1555 4555 2.25 LINK MG MG B 255 O HOH B2114 1555 4555 2.39 LINK MG MG B 255 O HOH B2114 1555 1555 2.39 LINK MG MG B 255 O HOH B2116 1555 4555 2.24 LINK MG MG B 255 O HOH B2116 1555 1555 2.24 LINK OXT TRP C 254 MG MG C 256 1555 1555 1.94 LINK OXT TRP C 254 MG MG D 256 3555 1555 1.88 LINK MG MG C 256 O HOH C2101 1555 1555 2.25 LINK MG MG C 256 O HOH C2104 1555 1555 2.16 LINK MG MG C 256 O HOH C2105 1555 1555 2.37 LINK MG MG C 256 O HOH C2106 1555 1555 2.10 LINK MG MG C 256 OXT TRP D 254 1555 3555 2.19 LINK O HOH C2101 MG MG D 256 3555 1555 2.26 LINK O HOH C2104 MG MG D 256 3555 1555 2.17 LINK O HOH C2105 MG MG D 256 3555 1555 2.35 LINK O HOH C2106 MG MG D 256 3555 1555 2.09 LINK OXT TRP D 254 MG MG D 256 1555 1555 2.25 CISPEP 1 ARG A 152 PRO A 153 0 -0.99 CISPEP 2 ARG B 152 PRO B 153 0 -3.46 CISPEP 3 ARG C 152 PRO C 153 0 -6.66 CISPEP 4 ARG D 152 PRO D 153 0 4.21 SITE 1 AC1 4 TRP A 254 HOH A2143 HOH A2145 HOH A2146 SITE 1 AC2 27 GLY A 18 SER A 21 GLY A 22 ILE A 23 SITE 2 AC2 27 ASP A 42 ARG A 43 ALA A 65 ASP A 66 SITE 3 AC2 27 VAL A 67 SER A 92 ALA A 93 LEU A 142 SITE 4 AC2 27 GLY A 143 SER A 144 TYR A 159 LYS A 163 SITE 5 AC2 27 PRO A 189 GLY A 190 VAL A 192 THR A 194 SITE 6 AC2 27 MET A 196 THR A 197 1SP A 258 HOH A2147 SITE 7 AC2 27 HOH A2148 HOH A2149 HOH A2150 SITE 1 AC3 6 SER A 144 SER A 146 ASN A 151 TYR A 159 SITE 2 AC3 6 THR A 197 NAD A 257 SITE 1 AC4 8 ALA A 45 ASP A 49 ARG A 62 ALA D 45 SITE 2 AC4 8 LEU D 48 ASP D 49 ARG D 62 VAL D 64 SITE 1 AC5 4 TRP B 254 HOH B2111 HOH B2114 HOH B2116 SITE 1 AC6 29 GLY B 18 SER B 21 GLY B 22 ILE B 23 SITE 2 AC6 29 ASP B 42 ARG B 43 ALA B 65 ASP B 66 SITE 3 AC6 29 VAL B 67 SER B 92 ALA B 93 GLY B 94 SITE 4 AC6 29 VAL B 115 LEU B 142 GLY B 143 SER B 144 SITE 5 AC6 29 TYR B 159 LYS B 163 PRO B 189 GLY B 190 SITE 6 AC6 29 VAL B 192 THR B 194 GLU B 195 MET B 196 SITE 7 AC6 29 THR B 197 1SP B 258 HOH B2013 HOH B2117 SITE 8 AC6 29 HOH B2119 SITE 1 AC7 5 SER B 144 SER B 146 ASN B 151 TYR B 159 SITE 2 AC7 5 NAD B 257 SITE 1 AC8 6 TRP C 254 HOH C2101 HOH C2104 HOH C2105 SITE 2 AC8 6 HOH C2106 TRP D 254 SITE 1 AC9 27 1SP C 258 HOH C2108 GLY D 18 SER D 21 SITE 2 AC9 27 GLY D 22 ILE D 23 ASP D 42 ARG D 43 SITE 3 AC9 27 ALA D 65 ASP D 66 VAL D 67 SER D 92 SITE 4 AC9 27 ALA D 93 ILE D 95 VAL D 115 LEU D 142 SITE 5 AC9 27 GLY D 143 SER D 144 TYR D 159 LYS D 163 SITE 6 AC9 27 PRO D 189 GLY D 190 VAL D 192 THR D 194 SITE 7 AC9 27 GLU D 195 MET D 196 THR D 197 SITE 1 BC1 7 NAD C 257 SER D 144 MET D 145 SER D 146 SITE 2 BC1 7 ASN D 151 TYR D 159 THR D 197 SITE 1 BC2 6 TRP C 254 HOH C2101 HOH C2104 HOH C2105 SITE 2 BC2 6 HOH C2106 TRP D 254 SITE 1 BC3 30 GLY C 18 SER C 21 GLY C 22 ILE C 23 SITE 2 BC3 30 ASP C 42 ARG C 43 ALA C 65 ASP C 66 SITE 3 BC3 30 VAL C 67 SER C 92 ALA C 93 GLY C 94 SITE 4 BC3 30 VAL C 115 LEU C 142 GLY C 143 SER C 144 SITE 5 BC3 30 TYR C 159 LYS C 163 PRO C 189 GLY C 190 SITE 6 BC3 30 VAL C 192 THR C 194 GLU C 195 MET C 196 SITE 7 BC3 30 THR C 197 HOH C2041 1SP D 258 HOH D2116 SITE 8 BC3 30 HOH D2117 HOH D2118 SITE 1 BC4 4 SER C 144 SER C 146 TYR C 159 NAD D 257 CRYST1 60.720 113.620 256.925 90.00 90.00 90.00 C 2 2 21 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016469 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003892 0.00000 MTRIX1 1 -1.000000 0.004300 0.003000 12.70670 1 MTRIX2 1 0.004900 0.974600 0.223700 -0.06310 1 MTRIX3 1 0.003000 0.223700 -0.974600 0.02090 1 MTRIX1 2 -0.914400 0.000800 -0.404800 25.93400 1 MTRIX2 2 -0.001900 -1.000000 0.002400 99.45860 1 MTRIX3 2 -0.404800 0.002900 0.914400 5.38090 1