data_2WEW # _entry.id 2WEW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2WEW PDBE EBI-39331 WWPDB D_1290039331 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2WEX _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF HUMAN APOM IN COMPLEX WITH GLYCEROL 1- MYRISTIC ACID' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2WEW _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-04-02 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sevvana, M.' 1 'Ahnstrom, J.' 2 'Egerer-Sieber, C.' 3 'Dahlback, B.' 4 'Muller, Y.A.' 5 # _citation.id primary _citation.title 'Serendipitous Fatty Acid Binding Reveals the Structural Determinants for Ligand Recognition in Apolipoprotein M.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 393 _citation.page_first 920 _citation.page_last ? _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19733574 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2009.08.071 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Sevvana, M.' 1 primary 'Ahnstrom, J.' 2 primary 'Egerer-Sieber, C.' 3 primary 'Lange, H.A.' 4 primary 'Dahlback, B.' 5 primary 'Muller, Y.A.' 6 # _cell.entry_id 2WEW _cell.length_a 49.940 _cell.length_b 49.940 _cell.length_c 144.670 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WEW _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'APOLIPOPROTEIN M' 19242.789 1 ? ? 'RESIDUES 22-188' ? 2 non-polymer syn 'MYRISTIC ACID' 228.371 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PROTEIN G3A, APO-M, APOM' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMNQCPEHSQLTTLGVDGKEFPEVHLGQWYFIAGAAPTKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCV PRKWIYHLTEGSTDLRTEGRPDMKTELFSSSCPGGIMLNETGQGYQRFLLYNRSPHPPEKCVEEFKSLTSCLDSKAFLLT PRNQEACELSNN ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMNQCPEHSQLTTLGVDGKEFPEVHLGQWYFIAGAAPTKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCV PRKWIYHLTEGSTDLRTEGRPDMKTELFSSSCPGGIMLNETGQGYQRFLLYNRSPHPPEKCVEEFKSLTSCLDSKAFLLT PRNQEACELSNN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ASN n 1 6 GLN n 1 7 CYS n 1 8 PRO n 1 9 GLU n 1 10 HIS n 1 11 SER n 1 12 GLN n 1 13 LEU n 1 14 THR n 1 15 THR n 1 16 LEU n 1 17 GLY n 1 18 VAL n 1 19 ASP n 1 20 GLY n 1 21 LYS n 1 22 GLU n 1 23 PHE n 1 24 PRO n 1 25 GLU n 1 26 VAL n 1 27 HIS n 1 28 LEU n 1 29 GLY n 1 30 GLN n 1 31 TRP n 1 32 TYR n 1 33 PHE n 1 34 ILE n 1 35 ALA n 1 36 GLY n 1 37 ALA n 1 38 ALA n 1 39 PRO n 1 40 THR n 1 41 LYS n 1 42 GLU n 1 43 GLU n 1 44 LEU n 1 45 ALA n 1 46 THR n 1 47 PHE n 1 48 ASP n 1 49 PRO n 1 50 VAL n 1 51 ASP n 1 52 ASN n 1 53 ILE n 1 54 VAL n 1 55 PHE n 1 56 ASN n 1 57 MET n 1 58 ALA n 1 59 ALA n 1 60 GLY n 1 61 SER n 1 62 ALA n 1 63 PRO n 1 64 MET n 1 65 GLN n 1 66 LEU n 1 67 HIS n 1 68 LEU n 1 69 ARG n 1 70 ALA n 1 71 THR n 1 72 ILE n 1 73 ARG n 1 74 MET n 1 75 LYS n 1 76 ASP n 1 77 GLY n 1 78 LEU n 1 79 CYS n 1 80 VAL n 1 81 PRO n 1 82 ARG n 1 83 LYS n 1 84 TRP n 1 85 ILE n 1 86 TYR n 1 87 HIS n 1 88 LEU n 1 89 THR n 1 90 GLU n 1 91 GLY n 1 92 SER n 1 93 THR n 1 94 ASP n 1 95 LEU n 1 96 ARG n 1 97 THR n 1 98 GLU n 1 99 GLY n 1 100 ARG n 1 101 PRO n 1 102 ASP n 1 103 MET n 1 104 LYS n 1 105 THR n 1 106 GLU n 1 107 LEU n 1 108 PHE n 1 109 SER n 1 110 SER n 1 111 SER n 1 112 CYS n 1 113 PRO n 1 114 GLY n 1 115 GLY n 1 116 ILE n 1 117 MET n 1 118 LEU n 1 119 ASN n 1 120 GLU n 1 121 THR n 1 122 GLY n 1 123 GLN n 1 124 GLY n 1 125 TYR n 1 126 GLN n 1 127 ARG n 1 128 PHE n 1 129 LEU n 1 130 LEU n 1 131 TYR n 1 132 ASN n 1 133 ARG n 1 134 SER n 1 135 PRO n 1 136 HIS n 1 137 PRO n 1 138 PRO n 1 139 GLU n 1 140 LYS n 1 141 CYS n 1 142 VAL n 1 143 GLU n 1 144 GLU n 1 145 PHE n 1 146 LYS n 1 147 SER n 1 148 LEU n 1 149 THR n 1 150 SER n 1 151 CYS n 1 152 LEU n 1 153 ASP n 1 154 SER n 1 155 LYS n 1 156 ALA n 1 157 PHE n 1 158 LEU n 1 159 LEU n 1 160 THR n 1 161 PRO n 1 162 ARG n 1 163 ASN n 1 164 GLN n 1 165 GLU n 1 166 ALA n 1 167 CYS n 1 168 GLU n 1 169 LEU n 1 170 SER n 1 171 ASN n 1 172 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PET15B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2WEW 1 ? ? 2WEW ? 2 UNP APOM_HUMAN 1 ? ? O95445 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2WEW A 1 ? 5 ? 2WEW 17 ? 21 ? 17 21 2 2 2WEW A 6 ? 172 ? O95445 22 ? 188 ? 22 188 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MYR non-polymer . 'MYRISTIC ACID' ? 'C14 H28 O2' 228.371 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2WEW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 47.56 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;ABOUT 1-2 MICROL OF PROTEIN (10-16 MG/ML IN 20 MM TRIS-HCL, PH 7.2) WERE MIXED WITH 1-2 MICROL OF 30 % PEG1500 (W/V, IN DEIONISED WATER) AND EQUILIBRATED AGAINST 700 MICROL OF RESERVOIR SOLUTION CONTAINING 30 % PEG1500. ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type RAYONICS _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91841 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength 0.91841 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2WEW _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 1.95 _reflns.number_obs 13952 _reflns.number_all ? _reflns.percent_possible_obs 98.4 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 25.18 _reflns.B_iso_Wilson_estimate 36.55 _reflns.pdbx_redundancy 7.06 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.06 _reflns_shell.percent_possible_all 91.3 _reflns_shell.Rmerge_I_obs 0.36 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.84 _reflns_shell.pdbx_redundancy 5.90 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2WEW _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 13253 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 98.96 _refine.ls_R_factor_obs 0.21112 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20813 _refine.ls_R_factor_R_free 0.26746 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 696 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.916 _refine.B_iso_mean 30.360 _refine.aniso_B[1][1] -1.49 _refine.aniso_B[2][2] -1.49 _refine.aniso_B[3][3] 2.98 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.183 _refine.pdbx_overall_ESU_R_Free 0.176 _refine.overall_SU_ML 0.133 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.076 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1333 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 1436 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.021 ? 1408 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.610 1.973 ? 1906 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.283 5.000 ? 175 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.891 24.286 ? 63 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.319 15.000 ? 235 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.361 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.123 0.200 ? 203 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1076 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.234 0.200 ? 525 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.308 0.200 ? 921 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.143 0.200 ? 61 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.216 0.200 ? 51 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.259 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.913 1.500 ? 900 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.456 2.000 ? 1404 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.347 3.000 ? 581 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.297 4.500 ? 502 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.950 _refine_ls_shell.d_res_low 2.000 _refine_ls_shell.number_reflns_R_work 870 _refine_ls_shell.R_factor_R_work 0.223 _refine_ls_shell.percent_reflns_obs 89.41 _refine_ls_shell.R_factor_R_free 0.258 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2WEW _struct.title 'Crystal structure of human apoM in complex with myristic acid' _struct.pdbx_descriptor 'APOLIPOPROTEIN M' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2WEW _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' _struct_keywords.text 'LIPID TRANSPORT, LIGAND-BINDING SPECIFICITY, GLYCOPROTEIN, MYRISTIC ACID, HDL, LIPOCALIN, TRANSPORT, LIPOPROTEINS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 19 ? GLU A 22 ? ASP A 35 GLU A 38 5 ? 4 HELX_P HELX_P2 2 PRO A 24 ? HIS A 27 ? PRO A 40 HIS A 43 5 ? 4 HELX_P HELX_P3 3 LYS A 41 ? ASP A 48 ? LYS A 57 ASP A 64 5 ? 8 HELX_P HELX_P4 4 GLU A 139 ? LEU A 152 ? GLU A 155 LEU A 168 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 151 SG ? ? A CYS 23 A CYS 167 1_555 ? ? ? ? ? ? ? 2.032 ? disulf2 disulf ? ? A CYS 79 SG ? ? ? 1_555 A CYS 167 SG ? ? A CYS 95 A CYS 183 1_555 ? ? ? ? ? ? ? 2.058 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 23 A . ? PHE 39 A PRO 24 A ? PRO 40 A 1 2.80 2 GLY 99 A . ? GLY 115 A ARG 100 A ? ARG 116 A 1 7.05 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 8 ? AB ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel AA 7 8 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ARG A 96 ? THR A 97 ? ARG A 112 THR A 113 AA 2 CYS A 79 ? HIS A 87 ? CYS A 95 HIS A 103 AA 3 GLN A 65 ? MET A 74 ? GLN A 81 MET A 90 AA 4 VAL A 50 ? ALA A 59 ? VAL A 66 ALA A 75 AA 5 GLY A 29 ? ALA A 38 ? GLY A 45 ALA A 54 AA 6 TYR A 125 ? ASN A 132 ? TYR A 141 ASN A 148 AA 7 GLY A 115 ? GLY A 122 ? GLY A 131 GLY A 138 AA 8 LYS A 104 ? PHE A 108 ? LYS A 120 PHE A 124 AB 1 ARG A 96 ? THR A 97 ? ARG A 112 THR A 113 AB 2 CYS A 79 ? HIS A 87 ? CYS A 95 HIS A 103 AB 3 GLN A 65 ? MET A 74 ? GLN A 81 MET A 90 AB 4 VAL A 50 ? ALA A 59 ? VAL A 66 ALA A 75 AB 5 GLY A 29 ? ALA A 38 ? GLY A 45 ALA A 54 AB 6 ALA A 156 ? LEU A 159 ? ALA A 172 LEU A 175 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ARG A 96 ? N ARG A 112 O HIS A 87 ? O HIS A 103 AA 2 3 N TYR A 86 ? N TYR A 102 O LEU A 66 ? O LEU A 82 AA 3 4 O ARG A 73 ? O ARG A 89 N ASP A 51 ? N ASP A 67 AA 4 5 N MET A 57 ? N MET A 73 O GLY A 29 ? O GLY A 45 AA 5 6 N ALA A 37 ? N ALA A 53 O PHE A 128 ? O PHE A 144 AA 6 7 N TYR A 131 ? N TYR A 147 O ILE A 116 ? O ILE A 132 AA 7 8 N THR A 121 ? N THR A 137 O LYS A 104 ? O LYS A 120 AB 1 2 N ARG A 96 ? N ARG A 112 O HIS A 87 ? O HIS A 103 AB 2 3 N TYR A 86 ? N TYR A 102 O LEU A 66 ? O LEU A 82 AB 3 4 O ARG A 73 ? O ARG A 89 N ASP A 51 ? N ASP A 67 AB 4 5 N MET A 57 ? N MET A 73 O GLY A 29 ? O GLY A 45 AB 5 6 N ALA A 38 ? N ALA A 54 O ALA A 156 ? O ALA A 172 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE MYR A 1188' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 1189' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 HIS A 27 ? HIS A 43 . ? 1_555 ? 2 AC1 10 TRP A 31 ? TRP A 47 . ? 1_555 ? 3 AC1 10 PHE A 55 ? PHE A 71 . ? 1_555 ? 4 AC1 10 TRP A 84 ? TRP A 100 . ? 1_555 ? 5 AC1 10 TYR A 86 ? TYR A 102 . ? 1_555 ? 6 AC1 10 LEU A 107 ? LEU A 123 . ? 1_555 ? 7 AC1 10 GLU A 120 ? GLU A 136 . ? 1_555 ? 8 AC1 10 ARG A 127 ? ARG A 143 . ? 1_555 ? 9 AC1 10 TYR A 131 ? TYR A 147 . ? 1_555 ? 10 AC1 10 HOH D . ? HOH A 2083 . ? 1_555 ? 11 AC2 4 HIS A 136 ? HIS A 152 . ? 1_555 ? 12 AC2 4 PRO A 137 ? PRO A 153 . ? 1_555 ? 13 AC2 4 GLU A 139 ? GLU A 155 . ? 1_555 ? 14 AC2 4 ARG A 162 ? ARG A 178 . ? 1_555 ? # _database_PDB_matrix.entry_id 2WEW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2WEW _atom_sites.fract_transf_matrix[1][1] 0.020024 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020024 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006912 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 17 ? ? ? A . n A 1 2 SER 2 18 18 SER SER A . n A 1 3 HIS 3 19 19 HIS HIS A . n A 1 4 MET 4 20 20 MET MET A . n A 1 5 ASN 5 21 21 ASN ASN A . n A 1 6 GLN 6 22 22 GLN GLN A . n A 1 7 CYS 7 23 23 CYS CYS A . n A 1 8 PRO 8 24 24 PRO PRO A . n A 1 9 GLU 9 25 25 GLU GLU A . n A 1 10 HIS 10 26 26 HIS HIS A . n A 1 11 SER 11 27 27 SER SER A . n A 1 12 GLN 12 28 28 GLN GLN A . n A 1 13 LEU 13 29 29 LEU LEU A . n A 1 14 THR 14 30 30 THR THR A . n A 1 15 THR 15 31 31 THR THR A . n A 1 16 LEU 16 32 32 LEU LEU A . n A 1 17 GLY 17 33 33 GLY GLY A . n A 1 18 VAL 18 34 34 VAL VAL A . n A 1 19 ASP 19 35 35 ASP ASP A . n A 1 20 GLY 20 36 36 GLY GLY A . n A 1 21 LYS 21 37 37 LYS LYS A . n A 1 22 GLU 22 38 38 GLU GLU A . n A 1 23 PHE 23 39 39 PHE PHE A . n A 1 24 PRO 24 40 40 PRO PRO A . n A 1 25 GLU 25 41 41 GLU GLU A . n A 1 26 VAL 26 42 42 VAL VAL A . n A 1 27 HIS 27 43 43 HIS HIS A . n A 1 28 LEU 28 44 44 LEU LEU A . n A 1 29 GLY 29 45 45 GLY GLY A . n A 1 30 GLN 30 46 46 GLN GLN A . n A 1 31 TRP 31 47 47 TRP TRP A . n A 1 32 TYR 32 48 48 TYR TYR A . n A 1 33 PHE 33 49 49 PHE PHE A . n A 1 34 ILE 34 50 50 ILE ILE A . n A 1 35 ALA 35 51 51 ALA ALA A . n A 1 36 GLY 36 52 52 GLY GLY A . n A 1 37 ALA 37 53 53 ALA ALA A . n A 1 38 ALA 38 54 54 ALA ALA A . n A 1 39 PRO 39 55 55 PRO PRO A . n A 1 40 THR 40 56 56 THR THR A . n A 1 41 LYS 41 57 57 LYS LYS A . n A 1 42 GLU 42 58 58 GLU GLU A . n A 1 43 GLU 43 59 59 GLU GLU A . n A 1 44 LEU 44 60 60 LEU LEU A . n A 1 45 ALA 45 61 61 ALA ALA A . n A 1 46 THR 46 62 62 THR THR A . n A 1 47 PHE 47 63 63 PHE PHE A . n A 1 48 ASP 48 64 64 ASP ASP A . n A 1 49 PRO 49 65 65 PRO PRO A . n A 1 50 VAL 50 66 66 VAL VAL A . n A 1 51 ASP 51 67 67 ASP ASP A . n A 1 52 ASN 52 68 68 ASN ASN A . n A 1 53 ILE 53 69 69 ILE ILE A . n A 1 54 VAL 54 70 70 VAL VAL A . n A 1 55 PHE 55 71 71 PHE PHE A . n A 1 56 ASN 56 72 72 ASN ASN A . n A 1 57 MET 57 73 73 MET MET A . n A 1 58 ALA 58 74 74 ALA ALA A . n A 1 59 ALA 59 75 75 ALA ALA A . n A 1 60 GLY 60 76 76 GLY GLY A . n A 1 61 SER 61 77 77 SER SER A . n A 1 62 ALA 62 78 78 ALA ALA A . n A 1 63 PRO 63 79 79 PRO PRO A . n A 1 64 MET 64 80 80 MET MET A . n A 1 65 GLN 65 81 81 GLN GLN A . n A 1 66 LEU 66 82 82 LEU LEU A . n A 1 67 HIS 67 83 83 HIS HIS A . n A 1 68 LEU 68 84 84 LEU LEU A . n A 1 69 ARG 69 85 85 ARG ARG A . n A 1 70 ALA 70 86 86 ALA ALA A . n A 1 71 THR 71 87 87 THR THR A . n A 1 72 ILE 72 88 88 ILE ILE A . n A 1 73 ARG 73 89 89 ARG ARG A . n A 1 74 MET 74 90 90 MET MET A . n A 1 75 LYS 75 91 91 LYS LYS A . n A 1 76 ASP 76 92 92 ASP ASP A . n A 1 77 GLY 77 93 93 GLY GLY A . n A 1 78 LEU 78 94 94 LEU LEU A . n A 1 79 CYS 79 95 95 CYS CYS A . n A 1 80 VAL 80 96 96 VAL VAL A . n A 1 81 PRO 81 97 97 PRO PRO A . n A 1 82 ARG 82 98 98 ARG ARG A . n A 1 83 LYS 83 99 99 LYS LYS A . n A 1 84 TRP 84 100 100 TRP TRP A . n A 1 85 ILE 85 101 101 ILE ILE A . n A 1 86 TYR 86 102 102 TYR TYR A . n A 1 87 HIS 87 103 103 HIS HIS A . n A 1 88 LEU 88 104 104 LEU LEU A . n A 1 89 THR 89 105 105 THR THR A . n A 1 90 GLU 90 106 106 GLU GLU A . n A 1 91 GLY 91 107 107 GLY GLY A . n A 1 92 SER 92 108 108 SER SER A . n A 1 93 THR 93 109 109 THR THR A . n A 1 94 ASP 94 110 110 ASP ASP A . n A 1 95 LEU 95 111 111 LEU LEU A . n A 1 96 ARG 96 112 112 ARG ARG A . n A 1 97 THR 97 113 113 THR THR A . n A 1 98 GLU 98 114 114 GLU GLU A . n A 1 99 GLY 99 115 115 GLY GLY A . n A 1 100 ARG 100 116 116 ARG ARG A . n A 1 101 PRO 101 117 117 PRO PRO A . n A 1 102 ASP 102 118 118 ASP ASP A . n A 1 103 MET 103 119 119 MET MET A . n A 1 104 LYS 104 120 120 LYS LYS A . n A 1 105 THR 105 121 121 THR THR A . n A 1 106 GLU 106 122 122 GLU GLU A . n A 1 107 LEU 107 123 123 LEU LEU A . n A 1 108 PHE 108 124 124 PHE PHE A . n A 1 109 SER 109 125 125 SER SER A . n A 1 110 SER 110 126 126 SER SER A . n A 1 111 SER 111 127 127 SER SER A . n A 1 112 CYS 112 128 128 CYS CYS A . n A 1 113 PRO 113 129 129 PRO PRO A . n A 1 114 GLY 114 130 130 GLY GLY A . n A 1 115 GLY 115 131 131 GLY GLY A . n A 1 116 ILE 116 132 132 ILE ILE A . n A 1 117 MET 117 133 133 MET MET A . n A 1 118 LEU 118 134 134 LEU LEU A . n A 1 119 ASN 119 135 135 ASN ASN A . n A 1 120 GLU 120 136 136 GLU GLU A . n A 1 121 THR 121 137 137 THR THR A . n A 1 122 GLY 122 138 138 GLY GLY A . n A 1 123 GLN 123 139 139 GLN GLN A . n A 1 124 GLY 124 140 140 GLY GLY A . n A 1 125 TYR 125 141 141 TYR TYR A . n A 1 126 GLN 126 142 142 GLN GLN A . n A 1 127 ARG 127 143 143 ARG ARG A . n A 1 128 PHE 128 144 144 PHE PHE A . n A 1 129 LEU 129 145 145 LEU LEU A . n A 1 130 LEU 130 146 146 LEU LEU A . n A 1 131 TYR 131 147 147 TYR TYR A . n A 1 132 ASN 132 148 148 ASN ASN A . n A 1 133 ARG 133 149 149 ARG ARG A . n A 1 134 SER 134 150 150 SER SER A . n A 1 135 PRO 135 151 151 PRO PRO A . n A 1 136 HIS 136 152 152 HIS HIS A . n A 1 137 PRO 137 153 153 PRO PRO A . n A 1 138 PRO 138 154 154 PRO PRO A . n A 1 139 GLU 139 155 155 GLU GLU A . n A 1 140 LYS 140 156 156 LYS LYS A . n A 1 141 CYS 141 157 157 CYS CYS A . n A 1 142 VAL 142 158 158 VAL VAL A . n A 1 143 GLU 143 159 159 GLU GLU A . n A 1 144 GLU 144 160 160 GLU GLU A . n A 1 145 PHE 145 161 161 PHE PHE A . n A 1 146 LYS 146 162 162 LYS LYS A . n A 1 147 SER 147 163 163 SER SER A . n A 1 148 LEU 148 164 164 LEU LEU A . n A 1 149 THR 149 165 165 THR THR A . n A 1 150 SER 150 166 166 SER SER A . n A 1 151 CYS 151 167 167 CYS CYS A . n A 1 152 LEU 152 168 168 LEU LEU A . n A 1 153 ASP 153 169 169 ASP ASP A . n A 1 154 SER 154 170 170 SER SER A . n A 1 155 LYS 155 171 171 LYS LYS A . n A 1 156 ALA 156 172 172 ALA ALA A . n A 1 157 PHE 157 173 173 PHE PHE A . n A 1 158 LEU 158 174 174 LEU LEU A . n A 1 159 LEU 159 175 175 LEU LEU A . n A 1 160 THR 160 176 176 THR THR A . n A 1 161 PRO 161 177 177 PRO PRO A . n A 1 162 ARG 162 178 178 ARG ARG A . n A 1 163 ASN 163 179 179 ASN ASN A . n A 1 164 GLN 164 180 180 GLN GLN A . n A 1 165 GLU 165 181 181 GLU GLU A . n A 1 166 ALA 166 182 182 ALA ALA A . n A 1 167 CYS 167 183 183 CYS CYS A . n A 1 168 GLU 168 184 184 GLU GLU A . n A 1 169 LEU 169 185 185 LEU LEU A . n A 1 170 SER 170 186 186 SER SER A . n A 1 171 ASN 171 187 187 ASN ASN A . n A 1 172 ASN 172 188 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYR 1 1188 1188 MYR MYR A . C 3 EDO 1 1189 1189 EDO EDO A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-15 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 25.1203 -10.7694 25.4068 0.1601 0.1990 0.1981 0.1317 0.0038 -0.1469 14.3811 1.1588 2.3956 3.7230 3.0243 1.0804 -0.0291 0.9736 -1.2395 0.1308 0.1326 -0.3417 0.2504 0.3611 -0.1035 'X-RAY DIFFRACTION' 2 ? refined 10.6641 2.0583 27.4671 0.1810 0.1276 0.0748 0.0533 0.0319 0.0313 3.5212 2.5554 0.1594 0.8356 -0.4132 0.0663 -0.0288 0.3089 0.1430 -0.4975 -0.0257 -0.1967 0.0043 -0.0401 0.0545 'X-RAY DIFFRACTION' 3 ? refined 2.3081 7.1227 27.4722 0.1657 0.0921 0.0213 0.0594 -0.0311 0.0126 3.1055 7.9009 3.1367 1.2285 1.2423 3.2235 0.0369 0.4086 0.0589 -0.5986 0.0427 -0.1069 -0.1127 -0.0895 -0.0796 'X-RAY DIFFRACTION' 4 ? refined 2.6910 4.3081 21.1539 0.2599 0.1368 -0.0045 0.0782 -0.0256 0.0069 1.2237 15.3823 7.0230 -1.8654 -1.3236 9.9895 0.0675 0.3682 0.1971 -1.0107 0.0088 -0.1070 -0.5247 0.0011 -0.0764 'X-RAY DIFFRACTION' 5 ? refined 12.1816 -0.7220 19.4478 0.1355 0.1712 -0.0077 0.0563 0.0422 0.0298 8.9729 3.8003 13.0842 -0.7151 0.8641 1.1080 0.1355 1.1055 0.2230 -0.7249 -0.0370 -0.0366 -0.6148 0.5960 -0.0985 'X-RAY DIFFRACTION' 6 ? refined 17.7982 2.2439 31.1834 0.0577 0.0519 0.1393 0.0469 0.0213 0.0254 5.7753 1.7331 3.5526 -0.4032 -1.1549 0.7705 0.0083 0.1653 0.2799 -0.1959 0.0287 -0.3776 -0.0685 0.1670 -0.0370 'X-RAY DIFFRACTION' 7 ? refined 11.5313 9.5371 33.9785 0.0590 -0.0115 0.1074 0.0064 -0.0125 0.0608 5.4258 3.8198 3.8980 -3.3978 -1.7911 2.4646 0.0377 -0.0748 0.4924 -0.0419 0.0374 -0.2586 -0.0718 0.0867 -0.0751 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 17 ? ? A 35 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 36 ? ? A 63 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 64 ? ? A 92 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 93 ? ? A 108 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 109 ? ? A 129 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 130 ? ? A 167 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 168 ? ? A 187 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 SHELXCDE phasing . ? 4 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; 700 ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _pdbx_entry_details.entry_id 2WEW _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'RESIDUES 22-188 WITHOUT SIGNAL PEPTIDE HAVE BEEN CLONED' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 48 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2018 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 21 ? ? -146.60 17.20 2 1 ASP A 35 ? ? 91.32 4.98 3 1 MET A 80 ? ? -104.90 57.88 4 1 GLU A 106 ? ? -39.55 118.43 5 1 LEU A 185 ? ? -122.64 -65.92 6 1 SER A 186 ? ? 96.24 131.44 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 SER _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 18 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 HIS _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 19 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -148.96 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 17 ? A GLY 1 2 1 Y 1 A ASN 188 ? A ASN 172 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MYRISTIC ACID' MYR 3 1,2-ETHANEDIOL EDO 4 water HOH #