data_2WFO # _entry.id 2WFO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2WFO PDBE EBI-39436 WWPDB D_1290039436 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2WFO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-04-09 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bowden, T.A.' 1 'Crispin, M.' 2 'Graham, S.C.' 3 'Harvey, D.J.' 4 'Grimes, J.M.' 5 'Jones, E.Y.' 6 'Stuart, D.I.' 7 # _citation.id primary _citation.title 'Unusual Molecular Architecture of the Machupo Virus Attachment Glycoprotein.' _citation.journal_abbrev J.Virol. _citation.journal_volume 83 _citation.page_first 8259 _citation.page_last ? _citation.year 2009 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19494008 _citation.pdbx_database_id_DOI 10.1128/JVI.00761-09 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bowden, T.A.' 1 ? primary 'Crispin, M.' 2 ? primary 'Graham, S.C.' 3 ? primary 'Harvey, D.J.' 4 ? primary 'Grimes, J.M.' 5 ? primary 'Jones, E.Y.' 6 ? primary 'Stuart, D.I.' 7 ? # _cell.entry_id 2WFO _cell.length_a 51.523 _cell.length_b 55.070 _cell.length_c 61.327 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WFO _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GLYCOPROTEIN 1' 21050.939 1 ? ? 'TFR1 RECEPTOR BINDING DOMAIN, RESIDUES 87-257' 'N-ACETYLGLUCOSAMINE LINKAGES OBSERVED IN STRUCTURE ASN95, ASN137, ASN166, AND ASN178' 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 3 ? ? ? ? 4 water nat water 18.015 198 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name MACV-GP1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ELPSLCMLNNSFYYMKGGANIFLIRVSDVSVLMKEYDVSVYEPEDLGNCLNKSDSSWAIHWFSIALGHDWLMDPPMLCRN KTKKEGSNIQFNISKADESRVYGKKIRNGMRHLFRGFYDPCEEGKVCYVTINQCGDPSSFEYCGTNYLSKCQFDHVNTLH FLVRSKTHLNFGTGTKHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;ELPSLCMLNNSFYYMKGGANIFLIRVSDVSVLMKEYDVSVYEPEDLGNCLNKSDSSWAIHWFSIALGHDWLMDPPMLCRN KTKKEGSNIQFNISKADESRVYGKKIRNGMRHLFRGFYDPCEEGKVCYVTINQCGDPSSFEYCGTNYLSKCQFDHVNTLH FLVRSKTHLNFGTGTKHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 LEU n 1 3 PRO n 1 4 SER n 1 5 LEU n 1 6 CYS n 1 7 MET n 1 8 LEU n 1 9 ASN n 1 10 ASN n 1 11 SER n 1 12 PHE n 1 13 TYR n 1 14 TYR n 1 15 MET n 1 16 LYS n 1 17 GLY n 1 18 GLY n 1 19 ALA n 1 20 ASN n 1 21 ILE n 1 22 PHE n 1 23 LEU n 1 24 ILE n 1 25 ARG n 1 26 VAL n 1 27 SER n 1 28 ASP n 1 29 VAL n 1 30 SER n 1 31 VAL n 1 32 LEU n 1 33 MET n 1 34 LYS n 1 35 GLU n 1 36 TYR n 1 37 ASP n 1 38 VAL n 1 39 SER n 1 40 VAL n 1 41 TYR n 1 42 GLU n 1 43 PRO n 1 44 GLU n 1 45 ASP n 1 46 LEU n 1 47 GLY n 1 48 ASN n 1 49 CYS n 1 50 LEU n 1 51 ASN n 1 52 LYS n 1 53 SER n 1 54 ASP n 1 55 SER n 1 56 SER n 1 57 TRP n 1 58 ALA n 1 59 ILE n 1 60 HIS n 1 61 TRP n 1 62 PHE n 1 63 SER n 1 64 ILE n 1 65 ALA n 1 66 LEU n 1 67 GLY n 1 68 HIS n 1 69 ASP n 1 70 TRP n 1 71 LEU n 1 72 MET n 1 73 ASP n 1 74 PRO n 1 75 PRO n 1 76 MET n 1 77 LEU n 1 78 CYS n 1 79 ARG n 1 80 ASN n 1 81 LYS n 1 82 THR n 1 83 LYS n 1 84 LYS n 1 85 GLU n 1 86 GLY n 1 87 SER n 1 88 ASN n 1 89 ILE n 1 90 GLN n 1 91 PHE n 1 92 ASN n 1 93 ILE n 1 94 SER n 1 95 LYS n 1 96 ALA n 1 97 ASP n 1 98 GLU n 1 99 SER n 1 100 ARG n 1 101 VAL n 1 102 TYR n 1 103 GLY n 1 104 LYS n 1 105 LYS n 1 106 ILE n 1 107 ARG n 1 108 ASN n 1 109 GLY n 1 110 MET n 1 111 ARG n 1 112 HIS n 1 113 LEU n 1 114 PHE n 1 115 ARG n 1 116 GLY n 1 117 PHE n 1 118 TYR n 1 119 ASP n 1 120 PRO n 1 121 CYS n 1 122 GLU n 1 123 GLU n 1 124 GLY n 1 125 LYS n 1 126 VAL n 1 127 CYS n 1 128 TYR n 1 129 VAL n 1 130 THR n 1 131 ILE n 1 132 ASN n 1 133 GLN n 1 134 CYS n 1 135 GLY n 1 136 ASP n 1 137 PRO n 1 138 SER n 1 139 SER n 1 140 PHE n 1 141 GLU n 1 142 TYR n 1 143 CYS n 1 144 GLY n 1 145 THR n 1 146 ASN n 1 147 TYR n 1 148 LEU n 1 149 SER n 1 150 LYS n 1 151 CYS n 1 152 GLN n 1 153 PHE n 1 154 ASP n 1 155 HIS n 1 156 VAL n 1 157 ASN n 1 158 THR n 1 159 LEU n 1 160 HIS n 1 161 PHE n 1 162 LEU n 1 163 VAL n 1 164 ARG n 1 165 SER n 1 166 LYS n 1 167 THR n 1 168 HIS n 1 169 LEU n 1 170 ASN n 1 171 PHE n 1 172 GLY n 1 173 THR n 1 174 GLY n 1 175 THR n 1 176 LYS n 1 177 HIS n 1 178 HIS n 1 179 HIS n 1 180 HIS n 1 181 HIS n 1 182 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Machupo virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11628 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name Human _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293T _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PHLSEC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'SYNTHETICALLY OPTIMIZED CDNA (CODON DEVICES)' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP Q6PXS3_MACHU 1 ? ? Q6PXS3 ? 2 PDB 2WFO 1 ? ? 2WFO ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2WFO A 1 ? 171 ? Q6PXS3 87 ? 257 ? 87 257 2 2 2WFO A 172 ? 182 ? 2WFO 258 ? 268 ? 258 268 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2WFO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 50.4 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '25% (W/V) PEG 3350, 0.2 M NACL, AND 0.1 M BIS-TRIS (PH 5.5)' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details 'VERTICALLY BENDED MULTILAYER' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'DIAMOND (111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9334 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength 0.9334 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2WFO _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.73 _reflns.number_obs 18458 _reflns.number_all ? _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.40 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 14.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.73 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 90.5 _reflns_shell.Rmerge_I_obs 0.71 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.50 _reflns_shell.pdbx_redundancy 11.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2WFO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17465 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.07 _refine.ls_d_res_high 1.73 _refine.ls_percent_reflns_obs 98.1 _refine.ls_R_factor_obs 0.174 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.172 _refine.ls_R_factor_R_free 0.213 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 943 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.958 _refine.correlation_coeff_Fo_to_Fc_free 0.930 _refine.B_iso_mean 17.54 _refine.aniso_B[1][1] -0.68000 _refine.aniso_B[2][2] 0.67000 _refine.aniso_B[3][3] 0.00000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES CONTAIN TLS CONTRIBUTION.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.111 _refine.pdbx_overall_ESU_R_Free 0.111 _refine.overall_SU_ML 0.071 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.738 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1230 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 70 _refine_hist.number_atoms_solvent 198 _refine_hist.number_atoms_total 1498 _refine_hist.d_res_high 1.73 _refine_hist.d_res_low 32.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 1350 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 921 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.380 2.008 ? 1828 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.870 3.000 ? 2221 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.669 5.000 ? 154 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.857 24.355 ? 62 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.157 15.000 ? 223 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 26.166 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.088 0.200 ? 195 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1467 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 274 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.760 1.500 ? 765 'X-RAY DIFFRACTION' ? r_mcbond_other 0.184 1.500 ? 312 'X-RAY DIFFRACTION' ? r_mcangle_it 1.467 2.000 ? 1232 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.211 3.000 ? 585 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.558 4.500 ? 596 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.73 _refine_ls_shell.d_res_low 1.78 _refine_ls_shell.number_reflns_R_work 1163 _refine_ls_shell.R_factor_R_work 0.2300 _refine_ls_shell.percent_reflns_obs 90.12 _refine_ls_shell.R_factor_R_free 0.3050 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2WFO _struct.title 'Crystal structure of Machupo virus envelope glycoprotein GP1' _struct.pdbx_descriptor 'GLYCOPROTEIN 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2WFO _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text ;GLYCOPROTEIN, ARENAVIRUS, NEW WORLD ARENAVIRUS, HEMORRHAGIC FEVER VIRUS, ENVELOPE PROTEIN, MACHUPO, JUNIN, GUANARITO, SABIA, CHAPARE, VIRION, MACV, GP1, VIRAL ATTACHMENT, TRANSFERRIN RECEPTOR, VIRAL PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 42 ? CYS A 49 ? GLU A 128 CYS A 135 5 ? 8 HELX_P HELX_P2 2 LYS A 52 ? ASP A 54 ? LYS A 138 ASP A 140 5 ? 3 HELX_P HELX_P3 3 SER A 55 ? GLY A 67 ? SER A 141 GLY A 153 1 ? 13 HELX_P HELX_P4 4 SER A 99 ? PHE A 114 ? SER A 185 PHE A 200 1 ? 16 HELX_P HELX_P5 5 ASP A 136 ? PHE A 140 ? ASP A 222 PHE A 226 5 ? 5 HELX_P HELX_P6 6 GLY A 144 ? SER A 149 ? GLY A 230 SER A 235 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 151 SG ? ? A CYS 92 A CYS 237 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf2 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 78 SG ? ? A CYS 135 A CYS 164 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf3 disulf ? ? A CYS 121 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 207 A CYS 213 1_555 ? ? ? ? ? ? ? 2.087 ? ? disulf4 disulf ? ? A CYS 134 SG ? ? ? 1_555 A CYS 143 SG ? ? A CYS 220 A CYS 229 1_555 ? ? ? ? ? ? ? 2.034 ? ? covale1 covale one ? A ASN 9 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 95 A NAG 1241 1_555 ? ? ? ? ? ? ? 1.436 ? N-Glycosylation covale2 covale one ? A ASN 51 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 137 A NAG 1243 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation covale3 covale one ? A ASN 80 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 166 A NAG 1240 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale4 covale one ? A ASN 92 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 178 B NAG 1 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation covale5 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 4 ? MET A 7 ? SER A 90 MET A 93 AA 2 PHE A 12 ? GLY A 17 ? PHE A 98 GLY A 103 AA 3 ASN A 20 ? SER A 27 ? ASN A 106 SER A 113 AA 4 TYR A 128 ? GLN A 133 ? TYR A 214 GLN A 219 AA 5 ILE A 89 ? ASN A 92 ? ILE A 175 ASN A 178 AA 6 MET A 76 ? CYS A 78 ? MET A 162 CYS A 164 AA 7 VAL A 38 ? VAL A 40 ? VAL A 124 VAL A 126 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N CYS A 6 ? N CYS A 92 O TYR A 14 ? O TYR A 100 AA 2 3 N GLY A 17 ? N GLY A 103 O ASN A 20 ? O ASN A 106 AA 3 4 N SER A 27 ? N SER A 113 O TYR A 128 ? O TYR A 214 AA 4 5 N ILE A 131 ? N ILE A 217 O ILE A 89 ? O ILE A 175 AA 5 6 N GLN A 90 ? N GLN A 176 O LEU A 77 ? O LEU A 163 AA 6 7 N CYS A 78 ? N CYS A 164 O VAL A 38 ? O VAL A 124 # _database_PDB_matrix.entry_id 2WFO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2WFO _atom_sites.fract_transf_matrix[1][1] 0.019409 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018159 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016306 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 87 87 GLU GLU A . n A 1 2 LEU 2 88 88 LEU LEU A . n A 1 3 PRO 3 89 89 PRO PRO A . n A 1 4 SER 4 90 90 SER SER A . n A 1 5 LEU 5 91 91 LEU LEU A . n A 1 6 CYS 6 92 92 CYS CYS A . n A 1 7 MET 7 93 93 MET MET A . n A 1 8 LEU 8 94 94 LEU LEU A . n A 1 9 ASN 9 95 95 ASN ASN A . n A 1 10 ASN 10 96 96 ASN ASN A . n A 1 11 SER 11 97 97 SER SER A . n A 1 12 PHE 12 98 98 PHE PHE A . n A 1 13 TYR 13 99 99 TYR TYR A . n A 1 14 TYR 14 100 100 TYR TYR A . n A 1 15 MET 15 101 101 MET MET A . n A 1 16 LYS 16 102 102 LYS LYS A . n A 1 17 GLY 17 103 103 GLY GLY A . n A 1 18 GLY 18 104 104 GLY GLY A . n A 1 19 ALA 19 105 105 ALA ALA A . n A 1 20 ASN 20 106 106 ASN ASN A . n A 1 21 ILE 21 107 107 ILE ILE A . n A 1 22 PHE 22 108 108 PHE PHE A . n A 1 23 LEU 23 109 109 LEU LEU A . n A 1 24 ILE 24 110 110 ILE ILE A . n A 1 25 ARG 25 111 111 ARG ARG A . n A 1 26 VAL 26 112 112 VAL VAL A . n A 1 27 SER 27 113 113 SER SER A . n A 1 28 ASP 28 114 114 ASP ASP A . n A 1 29 VAL 29 115 115 VAL VAL A . n A 1 30 SER 30 116 116 SER SER A . n A 1 31 VAL 31 117 117 VAL VAL A . n A 1 32 LEU 32 118 118 LEU LEU A . n A 1 33 MET 33 119 119 MET MET A . n A 1 34 LYS 34 120 120 LYS LYS A . n A 1 35 GLU 35 121 121 GLU GLU A . n A 1 36 TYR 36 122 122 TYR TYR A . n A 1 37 ASP 37 123 123 ASP ASP A . n A 1 38 VAL 38 124 124 VAL VAL A . n A 1 39 SER 39 125 125 SER SER A . n A 1 40 VAL 40 126 126 VAL VAL A . n A 1 41 TYR 41 127 127 TYR TYR A . n A 1 42 GLU 42 128 128 GLU GLU A . n A 1 43 PRO 43 129 129 PRO PRO A . n A 1 44 GLU 44 130 130 GLU GLU A . n A 1 45 ASP 45 131 131 ASP ASP A . n A 1 46 LEU 46 132 132 LEU LEU A . n A 1 47 GLY 47 133 133 GLY GLY A . n A 1 48 ASN 48 134 134 ASN ASN A . n A 1 49 CYS 49 135 135 CYS CYS A . n A 1 50 LEU 50 136 136 LEU LEU A . n A 1 51 ASN 51 137 137 ASN ASN A . n A 1 52 LYS 52 138 138 LYS LYS A . n A 1 53 SER 53 139 139 SER SER A . n A 1 54 ASP 54 140 140 ASP ASP A . n A 1 55 SER 55 141 141 SER SER A . n A 1 56 SER 56 142 142 SER SER A . n A 1 57 TRP 57 143 143 TRP TRP A . n A 1 58 ALA 58 144 144 ALA ALA A . n A 1 59 ILE 59 145 145 ILE ILE A . n A 1 60 HIS 60 146 146 HIS HIS A . n A 1 61 TRP 61 147 147 TRP TRP A . n A 1 62 PHE 62 148 148 PHE PHE A . n A 1 63 SER 63 149 149 SER SER A . n A 1 64 ILE 64 150 150 ILE ILE A . n A 1 65 ALA 65 151 151 ALA ALA A . n A 1 66 LEU 66 152 152 LEU LEU A . n A 1 67 GLY 67 153 153 GLY GLY A . n A 1 68 HIS 68 154 154 HIS HIS A . n A 1 69 ASP 69 155 155 ASP ASP A . n A 1 70 TRP 70 156 156 TRP TRP A . n A 1 71 LEU 71 157 157 LEU LEU A . n A 1 72 MET 72 158 158 MET MET A . n A 1 73 ASP 73 159 159 ASP ASP A . n A 1 74 PRO 74 160 160 PRO PRO A . n A 1 75 PRO 75 161 161 PRO PRO A . n A 1 76 MET 76 162 162 MET MET A . n A 1 77 LEU 77 163 163 LEU LEU A . n A 1 78 CYS 78 164 164 CYS CYS A . n A 1 79 ARG 79 165 165 ARG ARG A . n A 1 80 ASN 80 166 166 ASN ASN A . n A 1 81 LYS 81 167 167 LYS LYS A . n A 1 82 THR 82 168 168 THR THR A . n A 1 83 LYS 83 169 169 LYS LYS A . n A 1 84 LYS 84 170 170 LYS LYS A . n A 1 85 GLU 85 171 171 GLU GLU A . n A 1 86 GLY 86 172 172 GLY GLY A . n A 1 87 SER 87 173 173 SER SER A . n A 1 88 ASN 88 174 174 ASN ASN A . n A 1 89 ILE 89 175 175 ILE ILE A . n A 1 90 GLN 90 176 176 GLN GLN A . n A 1 91 PHE 91 177 177 PHE PHE A . n A 1 92 ASN 92 178 178 ASN ASN A . n A 1 93 ILE 93 179 179 ILE ILE A . n A 1 94 SER 94 180 180 SER SER A . n A 1 95 LYS 95 181 181 LYS LYS A . n A 1 96 ALA 96 182 182 ALA ALA A . n A 1 97 ASP 97 183 183 ASP ASP A . n A 1 98 GLU 98 184 184 GLU GLU A . n A 1 99 SER 99 185 185 SER SER A . n A 1 100 ARG 100 186 186 ARG ARG A . n A 1 101 VAL 101 187 187 VAL VAL A . n A 1 102 TYR 102 188 188 TYR TYR A . n A 1 103 GLY 103 189 189 GLY GLY A . n A 1 104 LYS 104 190 190 LYS LYS A . n A 1 105 LYS 105 191 191 LYS LYS A . n A 1 106 ILE 106 192 192 ILE ILE A . n A 1 107 ARG 107 193 193 ARG ARG A . n A 1 108 ASN 108 194 194 ASN ASN A . n A 1 109 GLY 109 195 195 GLY GLY A . n A 1 110 MET 110 196 196 MET MET A . n A 1 111 ARG 111 197 197 ARG ARG A . n A 1 112 HIS 112 198 198 HIS HIS A . n A 1 113 LEU 113 199 199 LEU LEU A . n A 1 114 PHE 114 200 200 PHE PHE A . n A 1 115 ARG 115 201 201 ARG ARG A . n A 1 116 GLY 116 202 202 GLY GLY A . n A 1 117 PHE 117 203 203 PHE PHE A . n A 1 118 TYR 118 204 204 TYR TYR A . n A 1 119 ASP 119 205 205 ASP ASP A . n A 1 120 PRO 120 206 206 PRO PRO A . n A 1 121 CYS 121 207 207 CYS CYS A . n A 1 122 GLU 122 208 208 GLU GLU A . n A 1 123 GLU 123 209 209 GLU GLU A . n A 1 124 GLY 124 210 210 GLY GLY A . n A 1 125 LYS 125 211 211 LYS LYS A . n A 1 126 VAL 126 212 212 VAL VAL A . n A 1 127 CYS 127 213 213 CYS CYS A . n A 1 128 TYR 128 214 214 TYR TYR A . n A 1 129 VAL 129 215 215 VAL VAL A . n A 1 130 THR 130 216 216 THR THR A . n A 1 131 ILE 131 217 217 ILE ILE A . n A 1 132 ASN 132 218 218 ASN ASN A . n A 1 133 GLN 133 219 219 GLN GLN A . n A 1 134 CYS 134 220 220 CYS CYS A . n A 1 135 GLY 135 221 221 GLY GLY A . n A 1 136 ASP 136 222 222 ASP ASP A . n A 1 137 PRO 137 223 223 PRO PRO A . n A 1 138 SER 138 224 224 SER SER A . n A 1 139 SER 139 225 225 SER SER A . n A 1 140 PHE 140 226 226 PHE PHE A . n A 1 141 GLU 141 227 227 GLU GLU A . n A 1 142 TYR 142 228 228 TYR TYR A . n A 1 143 CYS 143 229 229 CYS CYS A . n A 1 144 GLY 144 230 230 GLY GLY A . n A 1 145 THR 145 231 231 THR THR A . n A 1 146 ASN 146 232 232 ASN ASN A . n A 1 147 TYR 147 233 233 TYR TYR A . n A 1 148 LEU 148 234 234 LEU LEU A . n A 1 149 SER 149 235 235 SER SER A . n A 1 150 LYS 150 236 236 LYS LYS A . n A 1 151 CYS 151 237 237 CYS CYS A . n A 1 152 GLN 152 238 238 GLN GLN A . n A 1 153 PHE 153 239 239 PHE PHE A . n A 1 154 ASP 154 240 ? ? ? A . n A 1 155 HIS 155 241 ? ? ? A . n A 1 156 VAL 156 242 ? ? ? A . n A 1 157 ASN 157 243 ? ? ? A . n A 1 158 THR 158 244 ? ? ? A . n A 1 159 LEU 159 245 ? ? ? A . n A 1 160 HIS 160 246 ? ? ? A . n A 1 161 PHE 161 247 ? ? ? A . n A 1 162 LEU 162 248 ? ? ? A . n A 1 163 VAL 163 249 ? ? ? A . n A 1 164 ARG 164 250 ? ? ? A . n A 1 165 SER 165 251 ? ? ? A . n A 1 166 LYS 166 252 ? ? ? A . n A 1 167 THR 167 253 ? ? ? A . n A 1 168 HIS 168 254 ? ? ? A . n A 1 169 LEU 169 255 ? ? ? A . n A 1 170 ASN 170 256 ? ? ? A . n A 1 171 PHE 171 257 ? ? ? A . n A 1 172 GLY 172 258 ? ? ? A . n A 1 173 THR 173 259 ? ? ? A . n A 1 174 GLY 174 260 ? ? ? A . n A 1 175 THR 175 261 ? ? ? A . n A 1 176 LYS 176 262 ? ? ? A . n A 1 177 HIS 177 263 ? ? ? A . n A 1 178 HIS 178 264 ? ? ? A . n A 1 179 HIS 179 265 ? ? ? A . n A 1 180 HIS 180 266 ? ? ? A . n A 1 181 HIS 181 267 ? ? ? A . n A 1 182 HIS 182 268 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG 1 1240 1240 NAG NAG A . D 3 NAG 1 1241 1241 NAG NAG A . E 3 NAG 1 1243 1243 NAG NAG A . F 4 HOH 1 2001 2001 HOH HOH A . F 4 HOH 2 2002 2002 HOH HOH A . F 4 HOH 3 2003 2003 HOH HOH A . F 4 HOH 4 2004 2004 HOH HOH A . F 4 HOH 5 2005 2005 HOH HOH A . F 4 HOH 6 2006 2006 HOH HOH A . F 4 HOH 7 2007 2007 HOH HOH A . F 4 HOH 8 2008 2008 HOH HOH A . F 4 HOH 9 2009 2009 HOH HOH A . F 4 HOH 10 2010 2010 HOH HOH A . F 4 HOH 11 2011 2011 HOH HOH A . F 4 HOH 12 2012 2012 HOH HOH A . F 4 HOH 13 2013 2013 HOH HOH A . F 4 HOH 14 2014 2014 HOH HOH A . F 4 HOH 15 2015 2015 HOH HOH A . F 4 HOH 16 2016 2016 HOH HOH A . F 4 HOH 17 2017 2017 HOH HOH A . F 4 HOH 18 2018 2018 HOH HOH A . F 4 HOH 19 2019 2019 HOH HOH A . F 4 HOH 20 2020 2020 HOH HOH A . F 4 HOH 21 2021 2021 HOH HOH A . F 4 HOH 22 2022 2022 HOH HOH A . F 4 HOH 23 2023 2023 HOH HOH A . F 4 HOH 24 2024 2024 HOH HOH A . F 4 HOH 25 2025 2025 HOH HOH A . F 4 HOH 26 2026 2026 HOH HOH A . F 4 HOH 27 2027 2027 HOH HOH A . F 4 HOH 28 2028 2028 HOH HOH A . F 4 HOH 29 2029 2029 HOH HOH A . F 4 HOH 30 2030 2030 HOH HOH A . F 4 HOH 31 2031 2031 HOH HOH A . F 4 HOH 32 2032 2032 HOH HOH A . F 4 HOH 33 2033 2033 HOH HOH A . F 4 HOH 34 2034 2034 HOH HOH A . F 4 HOH 35 2035 2035 HOH HOH A . F 4 HOH 36 2036 2036 HOH HOH A . F 4 HOH 37 2037 2037 HOH HOH A . F 4 HOH 38 2038 2038 HOH HOH A . F 4 HOH 39 2039 2039 HOH HOH A . F 4 HOH 40 2040 2040 HOH HOH A . F 4 HOH 41 2041 2041 HOH HOH A . F 4 HOH 42 2042 2042 HOH HOH A . F 4 HOH 43 2043 2043 HOH HOH A . F 4 HOH 44 2044 2044 HOH HOH A . F 4 HOH 45 2045 2045 HOH HOH A . F 4 HOH 46 2046 2046 HOH HOH A . F 4 HOH 47 2047 2047 HOH HOH A . F 4 HOH 48 2048 2048 HOH HOH A . F 4 HOH 49 2049 2049 HOH HOH A . F 4 HOH 50 2050 2050 HOH HOH A . F 4 HOH 51 2051 2051 HOH HOH A . F 4 HOH 52 2052 2052 HOH HOH A . F 4 HOH 53 2053 2053 HOH HOH A . F 4 HOH 54 2054 2054 HOH HOH A . F 4 HOH 55 2055 2055 HOH HOH A . F 4 HOH 56 2056 2056 HOH HOH A . F 4 HOH 57 2057 2057 HOH HOH A . F 4 HOH 58 2058 2058 HOH HOH A . F 4 HOH 59 2059 2059 HOH HOH A . F 4 HOH 60 2060 2060 HOH HOH A . F 4 HOH 61 2061 2061 HOH HOH A . F 4 HOH 62 2062 2062 HOH HOH A . F 4 HOH 63 2063 2063 HOH HOH A . F 4 HOH 64 2064 2064 HOH HOH A . F 4 HOH 65 2065 2065 HOH HOH A . F 4 HOH 66 2066 2066 HOH HOH A . F 4 HOH 67 2067 2067 HOH HOH A . F 4 HOH 68 2068 2068 HOH HOH A . F 4 HOH 69 2069 2069 HOH HOH A . F 4 HOH 70 2070 2070 HOH HOH A . F 4 HOH 71 2071 2071 HOH HOH A . F 4 HOH 72 2072 2072 HOH HOH A . F 4 HOH 73 2073 2073 HOH HOH A . F 4 HOH 74 2074 2074 HOH HOH A . F 4 HOH 75 2075 2075 HOH HOH A . F 4 HOH 76 2076 2076 HOH HOH A . F 4 HOH 77 2077 2077 HOH HOH A . F 4 HOH 78 2078 2078 HOH HOH A . F 4 HOH 79 2079 2079 HOH HOH A . F 4 HOH 80 2080 2080 HOH HOH A . F 4 HOH 81 2081 2081 HOH HOH A . F 4 HOH 82 2082 2082 HOH HOH A . F 4 HOH 83 2083 2083 HOH HOH A . F 4 HOH 84 2084 2084 HOH HOH A . F 4 HOH 85 2085 2085 HOH HOH A . F 4 HOH 86 2086 2086 HOH HOH A . F 4 HOH 87 2087 2087 HOH HOH A . F 4 HOH 88 2088 2088 HOH HOH A . F 4 HOH 89 2089 2089 HOH HOH A . F 4 HOH 90 2090 2090 HOH HOH A . F 4 HOH 91 2091 2091 HOH HOH A . F 4 HOH 92 2092 2092 HOH HOH A . F 4 HOH 93 2093 2093 HOH HOH A . F 4 HOH 94 2094 2094 HOH HOH A . F 4 HOH 95 2095 2095 HOH HOH A . F 4 HOH 96 2096 2096 HOH HOH A . F 4 HOH 97 2097 2097 HOH HOH A . F 4 HOH 98 2098 2098 HOH HOH A . F 4 HOH 99 2099 2099 HOH HOH A . F 4 HOH 100 2100 2100 HOH HOH A . F 4 HOH 101 2101 2101 HOH HOH A . F 4 HOH 102 2102 2102 HOH HOH A . F 4 HOH 103 2103 2103 HOH HOH A . F 4 HOH 104 2104 2104 HOH HOH A . F 4 HOH 105 2105 2105 HOH HOH A . F 4 HOH 106 2106 2106 HOH HOH A . F 4 HOH 107 2107 2107 HOH HOH A . F 4 HOH 108 2108 2108 HOH HOH A . F 4 HOH 109 2109 2109 HOH HOH A . F 4 HOH 110 2110 2110 HOH HOH A . F 4 HOH 111 2111 2111 HOH HOH A . F 4 HOH 112 2112 2112 HOH HOH A . F 4 HOH 113 2113 2113 HOH HOH A . F 4 HOH 114 2114 2114 HOH HOH A . F 4 HOH 115 2115 2115 HOH HOH A . F 4 HOH 116 2116 2116 HOH HOH A . F 4 HOH 117 2117 2117 HOH HOH A . F 4 HOH 118 2118 2118 HOH HOH A . F 4 HOH 119 2119 2119 HOH HOH A . F 4 HOH 120 2120 2120 HOH HOH A . F 4 HOH 121 2121 2121 HOH HOH A . F 4 HOH 122 2122 2122 HOH HOH A . F 4 HOH 123 2123 2123 HOH HOH A . F 4 HOH 124 2124 2124 HOH HOH A . F 4 HOH 125 2125 2125 HOH HOH A . F 4 HOH 126 2126 2126 HOH HOH A . F 4 HOH 127 2127 2127 HOH HOH A . F 4 HOH 128 2128 2128 HOH HOH A . F 4 HOH 129 2129 2129 HOH HOH A . F 4 HOH 130 2130 2130 HOH HOH A . F 4 HOH 131 2131 2131 HOH HOH A . F 4 HOH 132 2132 2132 HOH HOH A . F 4 HOH 133 2133 2133 HOH HOH A . F 4 HOH 134 2134 2134 HOH HOH A . F 4 HOH 135 2135 2135 HOH HOH A . F 4 HOH 136 2136 2136 HOH HOH A . F 4 HOH 137 2137 2137 HOH HOH A . F 4 HOH 138 2138 2138 HOH HOH A . F 4 HOH 139 2139 2139 HOH HOH A . F 4 HOH 140 2140 2140 HOH HOH A . F 4 HOH 141 2141 2141 HOH HOH A . F 4 HOH 142 2142 2142 HOH HOH A . F 4 HOH 143 2143 2143 HOH HOH A . F 4 HOH 144 2144 2144 HOH HOH A . F 4 HOH 145 2145 2145 HOH HOH A . F 4 HOH 146 2146 2146 HOH HOH A . F 4 HOH 147 2147 2147 HOH HOH A . F 4 HOH 148 2148 2148 HOH HOH A . F 4 HOH 149 2149 2149 HOH HOH A . F 4 HOH 150 2150 2150 HOH HOH A . F 4 HOH 151 2151 2151 HOH HOH A . F 4 HOH 152 2152 2152 HOH HOH A . F 4 HOH 153 2153 2153 HOH HOH A . F 4 HOH 154 2154 2154 HOH HOH A . F 4 HOH 155 2155 2155 HOH HOH A . F 4 HOH 156 2156 2156 HOH HOH A . F 4 HOH 157 2157 2157 HOH HOH A . F 4 HOH 158 2158 2158 HOH HOH A . F 4 HOH 159 2159 2159 HOH HOH A . F 4 HOH 160 2160 2160 HOH HOH A . F 4 HOH 161 2161 2161 HOH HOH A . F 4 HOH 162 2162 2162 HOH HOH A . F 4 HOH 163 2163 2163 HOH HOH A . F 4 HOH 164 2164 2164 HOH HOH A . F 4 HOH 165 2165 2165 HOH HOH A . F 4 HOH 166 2166 2166 HOH HOH A . F 4 HOH 167 2167 2167 HOH HOH A . F 4 HOH 168 2168 2168 HOH HOH A . F 4 HOH 169 2169 2169 HOH HOH A . F 4 HOH 170 2170 2170 HOH HOH A . F 4 HOH 171 2171 2171 HOH HOH A . F 4 HOH 172 2172 2172 HOH HOH A . F 4 HOH 173 2173 2173 HOH HOH A . F 4 HOH 174 2174 2174 HOH HOH A . F 4 HOH 175 2175 2175 HOH HOH A . F 4 HOH 176 2176 2176 HOH HOH A . F 4 HOH 177 2177 2177 HOH HOH A . F 4 HOH 178 2178 2178 HOH HOH A . F 4 HOH 179 2179 2179 HOH HOH A . F 4 HOH 180 2180 2180 HOH HOH A . F 4 HOH 181 2181 2181 HOH HOH A . F 4 HOH 182 2182 2182 HOH HOH A . F 4 HOH 183 2183 2183 HOH HOH A . F 4 HOH 184 2184 2184 HOH HOH A . F 4 HOH 185 2185 2185 HOH HOH A . F 4 HOH 186 2186 2186 HOH HOH A . F 4 HOH 187 2187 2187 HOH HOH A . F 4 HOH 188 2188 2188 HOH HOH A . F 4 HOH 189 2189 2189 HOH HOH A . F 4 HOH 190 2190 2190 HOH HOH A . F 4 HOH 191 2191 2191 HOH HOH A . F 4 HOH 192 2192 2192 HOH HOH A . F 4 HOH 193 2193 2193 HOH HOH A . F 4 HOH 194 2194 2194 HOH HOH A . F 4 HOH 195 2195 2195 HOH HOH A . F 4 HOH 196 2196 2196 HOH HOH A . F 4 HOH 197 2197 2197 HOH HOH A . F 4 HOH 198 2198 2198 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 9 A ASN 95 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 51 A ASN 137 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 80 A ASN 166 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 92 A ASN 178 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-16 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-02-28 5 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Source and taxonomy' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' Other 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_src_gen 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp 4 5 'Structure model' entity 5 5 'Structure model' pdbx_branch_scheme 6 5 'Structure model' pdbx_chem_comp_identifier 7 5 'Structure model' pdbx_database_status 8 5 'Structure model' pdbx_entity_branch 9 5 'Structure model' pdbx_entity_branch_descriptor 10 5 'Structure model' pdbx_entity_branch_link 11 5 'Structure model' pdbx_entity_branch_list 12 5 'Structure model' pdbx_entity_nonpoly 13 5 'Structure model' pdbx_nonpoly_scheme 14 5 'Structure model' pdbx_struct_assembly_gen 15 5 'Structure model' struct_asym 16 5 'Structure model' struct_conn 17 5 'Structure model' struct_site 18 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_src_gen.host_org_common_name' 2 4 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 3 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 4 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 5 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 6 5 'Structure model' '_atom_site.B_iso_or_equiv' 7 5 'Structure model' '_atom_site.Cartn_x' 8 5 'Structure model' '_atom_site.Cartn_y' 9 5 'Structure model' '_atom_site.Cartn_z' 10 5 'Structure model' '_atom_site.auth_asym_id' 11 5 'Structure model' '_atom_site.auth_seq_id' 12 5 'Structure model' '_atom_site.label_asym_id' 13 5 'Structure model' '_atom_site.label_entity_id' 14 5 'Structure model' '_chem_comp.name' 15 5 'Structure model' '_chem_comp.type' 16 5 'Structure model' '_pdbx_database_status.status_code_sf' 17 5 'Structure model' '_pdbx_entity_nonpoly.entity_id' 18 5 'Structure model' '_pdbx_entity_nonpoly.name' 19 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 20 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 21 5 'Structure model' '_struct_conn.pdbx_role' 22 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 33.0030 _pdbx_refine_tls.origin_y 36.2830 _pdbx_refine_tls.origin_z 5.0220 _pdbx_refine_tls.T[1][1] 0.0045 _pdbx_refine_tls.T[2][2] 0.0305 _pdbx_refine_tls.T[3][3] 0.0170 _pdbx_refine_tls.T[1][2] -0.0032 _pdbx_refine_tls.T[1][3] -0.0051 _pdbx_refine_tls.T[2][3] -0.0063 _pdbx_refine_tls.L[1][1] 0.7093 _pdbx_refine_tls.L[2][2] 0.6423 _pdbx_refine_tls.L[3][3] 0.5581 _pdbx_refine_tls.L[1][2] -0.0912 _pdbx_refine_tls.L[1][3] -0.1682 _pdbx_refine_tls.L[2][3] -0.0380 _pdbx_refine_tls.S[1][1] -0.0016 _pdbx_refine_tls.S[1][2] -0.0356 _pdbx_refine_tls.S[1][3] 0.0170 _pdbx_refine_tls.S[2][1] 0.0081 _pdbx_refine_tls.S[2][2] -0.0024 _pdbx_refine_tls.S[2][3] -0.0268 _pdbx_refine_tls.S[3][1] 0.0265 _pdbx_refine_tls.S[3][2] 0.0187 _pdbx_refine_tls.S[3][3] 0.0040 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 87 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 239 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0088 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SHARP phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 2070 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 2103 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 95 ? ? -164.16 -169.41 2 1 PHE A 226 ? ? 44.56 -128.32 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2056 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 5.84 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 240 ? A ASP 154 2 1 Y 1 A HIS 241 ? A HIS 155 3 1 Y 1 A VAL 242 ? A VAL 156 4 1 Y 1 A ASN 243 ? A ASN 157 5 1 Y 1 A THR 244 ? A THR 158 6 1 Y 1 A LEU 245 ? A LEU 159 7 1 Y 1 A HIS 246 ? A HIS 160 8 1 Y 1 A PHE 247 ? A PHE 161 9 1 Y 1 A LEU 248 ? A LEU 162 10 1 Y 1 A VAL 249 ? A VAL 163 11 1 Y 1 A ARG 250 ? A ARG 164 12 1 Y 1 A SER 251 ? A SER 165 13 1 Y 1 A LYS 252 ? A LYS 166 14 1 Y 1 A THR 253 ? A THR 167 15 1 Y 1 A HIS 254 ? A HIS 168 16 1 Y 1 A LEU 255 ? A LEU 169 17 1 Y 1 A ASN 256 ? A ASN 170 18 1 Y 1 A PHE 257 ? A PHE 171 19 1 Y 1 A GLY 258 ? A GLY 172 20 1 Y 1 A THR 259 ? A THR 173 21 1 Y 1 A GLY 260 ? A GLY 174 22 1 Y 1 A THR 261 ? A THR 175 23 1 Y 1 A LYS 262 ? A LYS 176 24 1 Y 1 A HIS 263 ? A HIS 177 25 1 Y 1 A HIS 264 ? A HIS 178 26 1 Y 1 A HIS 265 ? A HIS 179 27 1 Y 1 A HIS 266 ? A HIS 180 28 1 Y 1 A HIS 267 ? A HIS 181 29 1 Y 1 A HIS 268 ? A HIS 182 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1242 n B 2 NAG 2 B NAG 2 A NAG 1244 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 4 water HOH #