HEADER HYDROLASE INHIBITOR 21-APR-09 2WGN TITLE PSEUDOMONAS AERUGINOSA ICP COMPND MOL_ID: 1; COMPND 2 MOLECULE: INHIBITOR OF CYSTEINE PEPTIDASE COMPND 3; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: RESIDUES 24-134; COMPND 5 SYNONYM: HISPAICP, CHAGASIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS HYDROLASE INHIBITOR, DYNAMICS, PEPTIDASE INHIBITOR, CATHEPSIN KEYWDS 2 HYDROLASE INHIBITOR EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR Y.FU,B.O.SMITH REVDAT 2 23-OCT-24 2WGN 1 REMARK ATOM REVDAT 1 07-JUL-10 2WGN 0 JRNL AUTH Y.FU JRNL TITL STRUCTURE AND DYNAMICS OF PSEUDOMONAS AERUGINOSA ICP JRNL REF PH D THESIS 2009 JRNL PUBL UNIVERSITY OF GLASGOW, GLASGOW, UK. (THESIS) REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Y.FU,P.NICHOLA,G.WESTROP,J.MOTTRAM,G.COOMBS,S.BRIAN REMARK 1 TITL CHARACTERISATION OF THE STRUCTURE AND INHIBITORY ACTIVITY OF REMARK 1 TITL 2 PSEUDOMONAS AERUGINOSA ICP REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WGN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-APR-09. REMARK 100 THE DEPOSITION ID IS D_1290039554. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298.0 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 125 REMARK 210 PRESSURE : 1.0 ATM REMARK 210 SAMPLE CONTENTS : 5 PERCENT D2O, 25MM NA2HPO4, 75 REMARK 210 MM NACL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HBCBCGCDCEHE; HBCBCGCDHD; REMARK 210 NEWC13HSQC; NEWCBCACONH; REMARK 210 NEWCCONH; NEWHCCH; NEWHNCACB; REMARK 210 NEWHSQC; NEWN15NOESY; REMARK 210 NEWSAMC13NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AZARA, CNS, CCPNMR ANALYSIS REMARK 210 ANALYSIS, TOPSPIN REMARK 210 METHOD USED : ARIA ALIKE METHOD REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 25 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : LOWEST ENEGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY ON 13C, 15N-LABELED PA-ICP REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS B -16 -171.73 58.34 REMARK 500 1 HIS B -14 -172.61 58.37 REMARK 500 1 SER B -10 -21.82 -147.05 REMARK 500 1 GLN B 1 -34.49 -149.99 REMARK 500 1 VAL B 4 -45.34 -141.20 REMARK 500 1 VAL B 5 8.96 52.16 REMARK 500 1 LEU B 7 110.19 -165.05 REMARK 500 1 ASP B 12 45.28 -84.83 REMARK 500 1 PRO B 15 75.89 -63.59 REMARK 500 1 LEU B 24 81.77 -161.49 REMARK 500 1 THR B 34 -66.27 -101.00 REMARK 500 1 ARG B 37 -163.20 -103.16 REMARK 500 1 ARG B 41 -73.74 -93.99 REMARK 500 1 SER B 63 91.83 49.11 REMARK 500 1 SER B 68 1.93 -155.13 REMARK 500 1 ALA B 79 -41.79 -131.58 REMARK 500 1 ALA B 98 -172.85 -67.70 REMARK 500 1 SER B 105 111.31 -173.07 REMARK 500 2 HIS B -13 -38.94 -142.86 REMARK 500 2 LEU B -7 -172.28 58.14 REMARK 500 2 PRO B -5 -175.73 -63.93 REMARK 500 2 HIS B -1 -30.96 -154.50 REMARK 500 2 MET B 0 99.51 59.00 REMARK 500 2 VAL B 4 77.04 -156.14 REMARK 500 2 VAL B 5 103.76 -55.16 REMARK 500 2 ASP B 8 -29.32 -145.15 REMARK 500 2 ALA B 10 96.52 -66.10 REMARK 500 2 ASP B 11 -55.90 -134.65 REMARK 500 2 SER B 14 -49.15 -179.12 REMARK 500 2 LEU B 16 19.80 39.53 REMARK 500 2 LEU B 18 -168.03 -126.83 REMARK 500 2 ARG B 37 -160.25 -100.24 REMARK 500 2 ASN B 42 85.87 -169.32 REMARK 500 2 VAL B 47 -35.39 -136.31 REMARK 500 2 LYS B 49 -162.15 -124.28 REMARK 500 2 PRO B 53 -165.72 -66.77 REMARK 500 2 TYR B 56 -68.55 -141.35 REMARK 500 2 SER B 57 -5.11 -163.32 REMARK 500 2 SER B 59 -69.55 -92.94 REMARK 500 2 GLU B 60 98.80 58.87 REMARK 500 2 SER B 63 -21.53 -163.79 REMARK 500 2 ARG B 85 111.77 -160.81 REMARK 500 2 ASP B 97 95.84 57.51 REMARK 500 3 SER B -9 -27.30 -144.43 REMARK 500 3 GLN B 1 102.13 61.77 REMARK 500 3 VAL B 4 72.67 -153.84 REMARK 500 3 VAL B 5 107.96 -49.30 REMARK 500 3 ASP B 8 -26.66 -166.46 REMARK 500 3 PRO B 15 82.95 -59.12 REMARK 500 3 GLN B 20 105.15 -54.59 REMARK 500 REMARK 500 THIS ENTRY HAS 533 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2WGN B 1 111 UNP Q9I5G0 Q9I5G0_PSEAE 24 134 SEQADV 2WGN MET B -20 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN GLY B -19 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN SER B -18 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN SER B -17 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN HIS B -16 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN HIS B -15 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN HIS B -14 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN HIS B -13 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN HIS B -12 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN HIS B -11 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN SER B -10 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN SER B -9 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN GLY B -8 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN LEU B -7 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN VAL B -6 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN PRO B -5 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN ARG B -4 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN GLY B -3 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN SER B -2 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN HIS B -1 UNP Q9I5G0 EXPRESSION TAG SEQADV 2WGN MET B 0 UNP Q9I5G0 EXPRESSION TAG SEQRES 1 B 132 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 132 LEU VAL PRO ARG GLY SER HIS MET GLN LYS PRO VAL VAL SEQRES 3 B 132 THR LEU ASP ASP ALA ASP ASP CYS SER PRO LEU LYS LEU SEQRES 4 B 132 THR GLN GLY GLN GLU LEU VAL LEU THR LEU PRO SER ASN SEQRES 5 B 132 PRO THR THR GLY PHE ARG TRP GLU LEU ARG ASN PRO ALA SEQRES 6 B 132 ALA SER VAL LEU LYS ARG LEU GLY PRO GLU VAL TYR SER SEQRES 7 B 132 ASN SER GLU GLU ASP SER GLY LEU VAL GLY SER GLY GLY SEQRES 8 B 132 GLU SER THR TRP ARG PHE ARG VAL ALA ALA SER GLY ASP SEQRES 9 B 132 ASP ARG LEU GLU LEU VAL TYR ARG ARG PRO TRP GLU LYS SEQRES 10 B 132 ASP ALA GLU PRO ALA GLU SER PHE SER CYS ALA ILE GLN SEQRES 11 B 132 VAL ARG SHEET 1 BA 4 LEU B 16 LEU B 18 0 SHEET 2 BA 4 SER B 103 VAL B 110 1 O ALA B 107 N LEU B 16 SHEET 3 BA 4 GLY B 82 ARG B 91 -1 O GLY B 82 N VAL B 110 SHEET 4 BA 4 ARG B 37 ASN B 42 -1 O ARG B 37 N ARG B 91 SHEET 1 BB 3 GLU B 23 LEU B 28 0 SHEET 2 BB 3 SER B 72 VAL B 78 -1 O SER B 72 N LEU B 28 SHEET 3 BB 3 LEU B 48 ARG B 50 -1 O LYS B 49 N ARG B 77 SSBOND 1 CYS B 13 CYS B 106 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1