HEADER FLUORESCENT PROTEIN 15-MAY-09 2WIQ TITLE FLUORESCENT PROTEIN KILLERRED IN THE NATIVE STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: KILLERRED; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 2-237; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANTHOMEDUSAE SP. DC-2005; SOURCE 3 ORGANISM_TAXID: 328397; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15-B KEYWDS FLUORESCENT PROTEIN, CALI, ROS, REACTIVE OXYGEN SPECIES EXPDTA X-RAY DIFFRACTION AUTHOR P.CARPENTIER,S.VIOLOT,L.BLANCHOIN,D.BOURGEOIS REVDAT 7 13-DEC-23 2WIQ 1 REMARK REVDAT 6 15-NOV-23 2WIQ 1 REMARK LINK ATOM REVDAT 5 23-OCT-19 2WIQ 1 SEQADV REVDAT 4 06-MAR-19 2WIQ 1 REMARK LINK REVDAT 3 07-MAR-18 2WIQ 1 SOURCE REVDAT 2 08-SEP-09 2WIQ 1 JRNL REVDAT 1 11-AUG-09 2WIQ 0 JRNL AUTH P.CARPENTIER,S.VIOLOT,L.BLANCHOIN,D.BOURGEOIS JRNL TITL STRUCTURAL BASIS FOR THE PHOTOTOXICITY OF THE FLUORESCENT JRNL TITL 2 PROTEIN KILLERRED. JRNL REF FEBS LETT. V. 583 2839 2009 JRNL REFN ISSN 0014-5793 JRNL PMID 19646983 JRNL DOI 10.1016/J.FEBSLET.2009.07.041 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 27682 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1478 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1973 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1960 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3593 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 269 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.33000 REMARK 3 B33 (A**2) : 0.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.203 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.182 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.233 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3843 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5234 ; 1.882 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 485 ; 7.112 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 183 ;34.331 ;23.770 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 604 ;16.670 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;21.907 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 555 ; 0.137 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3033 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1693 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2532 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 279 ; 0.239 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 80 ; 0.305 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.321 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2350 ; 1.036 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3836 ; 1.864 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1516 ; 2.913 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1391 ; 4.378 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WIQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1290039831. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93300 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29194 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1GFL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, 0.1M TRIS PH REMARK 280 8.5, 0.05M ASCORBIC ACID, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.74500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.13000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.83500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.13000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.74500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.83500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 VAL A -7 REMARK 465 PRO A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 SER A 230 REMARK 465 ALA A 231 REMARK 465 ILE A 232 REMARK 465 GLY A 233 REMARK 465 SER A 234 REMARK 465 ASP A 235 REMARK 465 GLU A 236 REMARK 465 ASP A 237 REMARK 465 MET B -21 REMARK 465 GLY B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 SER B -11 REMARK 465 SER B -10 REMARK 465 GLY B -9 REMARK 465 LEU B -8 REMARK 465 VAL B -7 REMARK 465 PRO B -6 REMARK 465 ARG B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 GLY B 233 REMARK 465 SER B 234 REMARK 465 ASP B 235 REMARK 465 GLU B 236 REMARK 465 ASP B 237 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 230 OG REMARK 470 ILE B 232 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2011 O HOH A 2055 1.56 REMARK 500 NH1 ARG B 73 O HOH B 2058 1.91 REMARK 500 O HOH A 2078 O HOH A 2082 1.96 REMARK 500 O HOH A 2011 O HOH A 2052 1.97 REMARK 500 O HOH B 2009 O HOH B 2010 1.98 REMARK 500 OH TYR B 221 O HOH B 2141 2.01 REMARK 500 O HOH A 2055 O HOH B 2073 2.04 REMARK 500 O HOH B 2023 O HOH B 2024 2.10 REMARK 500 OE1 GLN B 25 O HOH B 2016 2.10 REMARK 500 O SER A 224 O HOH A 2115 2.14 REMARK 500 O SER A 224 O HOH A 2116 2.15 REMARK 500 O HOH B 2029 O HOH B 2030 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 187 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 187 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 SER A 224 N - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 ARG B 136 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 39 -157.65 69.48 REMARK 500 ASP A 76 -98.18 8.24 REMARK 500 ASP A 101 -153.20 -152.82 REMARK 500 ASP A 114 -104.30 64.74 REMARK 500 ASN A 184 30.32 -97.49 REMARK 500 THR A 207 107.05 -56.34 REMARK 500 ASP A 209 -90.46 -154.67 REMARK 500 SER A 224 -140.81 -93.35 REMARK 500 VAL A 225 139.70 83.11 REMARK 500 VAL A 225 139.70 -174.12 REMARK 500 HIS B 39 -156.69 67.74 REMARK 500 ASP B 41 104.01 -161.47 REMARK 500 ASP B 114 -93.37 61.80 REMARK 500 SER B 208 -71.60 -48.23 REMARK 500 ALA B 231 36.41 -90.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 11-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 12-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEETS PRESENTED AS "BA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 11-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 12-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1230 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1231 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1234 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WIS RELATED DB: PDB REMARK 900 FLUORESCENT PROTEIN KILLERRED IN THE BLEACHED STATE DBREF 2WIQ A -21 1 PDB 2WIQ 2WIQ -21 1 DBREF 2WIQ A 2 237 UNP Q2TCH5 Q2TCH5_9CNID 2 237 DBREF 2WIQ B -21 1 PDB 2WIQ 2WIQ -21 1 DBREF 2WIQ B 2 237 UNP Q2TCH5 Q2TCH5_9CNID 2 237 SEQADV 2WIQ CRQ A 65 UNP Q2TCH5 GLN 65 CHROMOPHORE SEQADV 2WIQ CRQ A 65 UNP Q2TCH5 TYR 66 CHROMOPHORE SEQADV 2WIQ CRQ A 65 UNP Q2TCH5 GLY 67 CHROMOPHORE SEQADV 2WIQ CRQ B 65 UNP Q2TCH5 GLN 65 CHROMOPHORE SEQADV 2WIQ CRQ B 65 UNP Q2TCH5 TYR 66 CHROMOPHORE SEQADV 2WIQ CRQ B 65 UNP Q2TCH5 GLY 67 CHROMOPHORE SEQRES 1 A 257 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 257 LEU VAL PRO ARG GLY SER HIS MET GLY SER GLU GLY GLY SEQRES 3 A 257 PRO ALA LEU PHE GLN SER ASP MET THR PHE LYS ILE PHE SEQRES 4 A 257 ILE ASP GLY GLU VAL ASN GLY GLN LYS PHE THR ILE VAL SEQRES 5 A 257 ALA ASP GLY SER SER LYS PHE PRO HIS GLY ASP PHE ASN SEQRES 6 A 257 VAL HIS ALA VAL CYS GLU THR GLY LYS LEU PRO MET SER SEQRES 7 A 257 TRP LYS PRO ILE CYS HIS LEU ILE CRQ GLU PRO PHE PHE SEQRES 8 A 257 ALA ARG TYR PRO ASP GLY ILE SER HIS PHE ALA GLN GLU SEQRES 9 A 257 CYS PHE PRO GLU GLY LEU SER ILE ASP ARG THR VAL ARG SEQRES 10 A 257 PHE GLU ASN ASP GLY THR MET THR SER HIS HIS THR TYR SEQRES 11 A 257 GLU LEU ASP ASP THR CYS VAL VAL SER ARG ILE THR VAL SEQRES 12 A 257 ASN CYS ASP GLY PHE GLN PRO ASP GLY PRO ILE MET ARG SEQRES 13 A 257 ASP GLN LEU VAL ASP ILE LEU PRO ASN GLU THR HIS MET SEQRES 14 A 257 PHE PRO HIS GLY PRO ASN ALA VAL ARG GLN LEU ALA PHE SEQRES 15 A 257 ILE GLY PHE THR THR ALA ASP GLY GLY LEU MET MET GLY SEQRES 16 A 257 HIS PHE ASP SER LYS MET THR PHE ASN GLY SER ARG ALA SEQRES 17 A 257 ILE GLU ILE PRO GLY PRO HIS PHE VAL THR ILE ILE THR SEQRES 18 A 257 LYS GLN MET ARG ASP THR SER ASP LYS ARG ASP HIS VAL SEQRES 19 A 257 CYS GLN ARG GLU VAL ALA TYR ALA HIS SER VAL PRO ARG SEQRES 20 A 257 ILE THR SER ALA ILE GLY SER ASP GLU ASP SEQRES 1 B 257 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 257 LEU VAL PRO ARG GLY SER HIS MET GLY SER GLU GLY GLY SEQRES 3 B 257 PRO ALA LEU PHE GLN SER ASP MET THR PHE LYS ILE PHE SEQRES 4 B 257 ILE ASP GLY GLU VAL ASN GLY GLN LYS PHE THR ILE VAL SEQRES 5 B 257 ALA ASP GLY SER SER LYS PHE PRO HIS GLY ASP PHE ASN SEQRES 6 B 257 VAL HIS ALA VAL CYS GLU THR GLY LYS LEU PRO MET SER SEQRES 7 B 257 TRP LYS PRO ILE CYS HIS LEU ILE CRQ GLU PRO PHE PHE SEQRES 8 B 257 ALA ARG TYR PRO ASP GLY ILE SER HIS PHE ALA GLN GLU SEQRES 9 B 257 CYS PHE PRO GLU GLY LEU SER ILE ASP ARG THR VAL ARG SEQRES 10 B 257 PHE GLU ASN ASP GLY THR MET THR SER HIS HIS THR TYR SEQRES 11 B 257 GLU LEU ASP ASP THR CYS VAL VAL SER ARG ILE THR VAL SEQRES 12 B 257 ASN CYS ASP GLY PHE GLN PRO ASP GLY PRO ILE MET ARG SEQRES 13 B 257 ASP GLN LEU VAL ASP ILE LEU PRO ASN GLU THR HIS MET SEQRES 14 B 257 PHE PRO HIS GLY PRO ASN ALA VAL ARG GLN LEU ALA PHE SEQRES 15 B 257 ILE GLY PHE THR THR ALA ASP GLY GLY LEU MET MET GLY SEQRES 16 B 257 HIS PHE ASP SER LYS MET THR PHE ASN GLY SER ARG ALA SEQRES 17 B 257 ILE GLU ILE PRO GLY PRO HIS PHE VAL THR ILE ILE THR SEQRES 18 B 257 LYS GLN MET ARG ASP THR SER ASP LYS ARG ASP HIS VAL SEQRES 19 B 257 CYS GLN ARG GLU VAL ALA TYR ALA HIS SER VAL PRO ARG SEQRES 20 B 257 ILE THR SER ALA ILE GLY SER ASP GLU ASP MODRES 2WIQ CRQ A 65 GLN MODRES 2WIQ CRQ A 65 TYR MODRES 2WIQ CRQ A 65 GLY MODRES 2WIQ CRQ B 65 GLN MODRES 2WIQ CRQ B 65 TYR MODRES 2WIQ CRQ B 65 GLY HET CRQ A 65 24 HET CRQ B 65 24 HET SO4 A1230 5 HET SO4 A1231 5 HET NA A1232 1 HET SO4 B1233 5 HET NA B1234 1 HETNAM CRQ [2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY- HETNAM 2 CRQ BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC HETNAM 3 CRQ ACID HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION HETSYN CRQ CHROMOPHORE (GLN-TYR-GLY) FORMUL 1 CRQ 2(C16 H16 N4 O5) FORMUL 3 SO4 3(O4 S 2-) FORMUL 5 NA 2(NA 1+) FORMUL 8 HOH *269(H2 O) HELIX 1 1 GLY A 3 GLN A 9 5 7 HELIX 2 2 TRP A 57 CYS A 61 5 5 HELIX 3 3 GLU A 68 ALA A 72 5 5 HELIX 4 4 HIS A 80 CYS A 85 1 6 HELIX 5 5 GLY B 3 PHE B 8 1 6 HELIX 6 6 TRP B 57 CYS B 61 5 5 HELIX 7 7 GLU B 68 ALA B 72 5 5 HELIX 8 8 HIS B 80 CYS B 85 1 6 SHEET 1 AA30 MET A 12 VAL A 22 0 SHEET 2 AA30 GLN A 25 SER A 35 -1 O GLN A 25 N VAL A 22 SHEET 3 AA30 ASP A 41 CYS A 48 -1 O ASN A 43 N SER A 34 SHEET 4 AA30 HIS A 213 HIS A 223 -1 O VAL A 214 N ALA A 46 SHEET 5 AA30 HIS A 195 ARG A 205 -1 O PHE A 196 N HIS A 223 SHEET 6 AA30 ASN A 145 PRO A 151 -1 O ASN A 145 N ILE A 199 SHEET 7 AA30 ALA A 156 THR A 167 1 O ARG A 158 N PHE A 150 SHEET 8 AA30 LEU A 139 ILE A 142 -1 N VAL A 140 O THR A 166 SHEET 9 AA30 GLN A 25 SER A 35 0 SHEET 10 AA30 MET A 12 VAL A 22 -1 O MET A 12 N SER A 35 SHEET 11 AA30 ASP A 41 CYS A 48 0 SHEET 12 AA30 GLN A 25 SER A 35 -1 O VAL A 30 N VAL A 47 SHEET 13 AA30 LEU A 90 PHE A 98 0 SHEET 14 AA30 THR A 103 ASP A 113 -1 O MET A 104 N VAL A 96 SHEET 15 AA30 THR A 103 ASP A 113 0 SHEET 16 AA30 LEU A 90 PHE A 98 -1 O LEU A 90 N TYR A 110 SHEET 17 AA30 CYS A 116 ASP A 126 0 SHEET 18 AA30 MET A 12 VAL A 22 1 O THR A 13 N VAL A 117 SHEET 19 AA30 LEU A 139 ILE A 142 0 SHEET 20 AA30 ALA A 156 THR A 167 -1 O THR A 166 N VAL A 140 SHEET 21 AA30 ASN A 145 PRO A 151 -1 O HIS A 148 N LEU A 160 SHEET 22 AA30 HIS A 195 ARG A 205 -1 O HIS A 195 N MET A 149 SHEET 23 AA30 ALA A 156 THR A 167 0 SHEET 24 AA30 LEU A 139 ILE A 142 -1 N VAL A 140 O THR A 166 SHEET 25 AA30 LEU A 172 PHE A 183 0 SHEET 26 AA30 LEU A 90 PHE A 98 -1 O SER A 91 N THR A 182 SHEET 27 AA30 HIS A 195 ARG A 205 0 SHEET 28 AA30 ASN A 145 PRO A 151 -1 O ASN A 145 N ILE A 199 SHEET 29 AA30 HIS A 213 HIS A 223 0 SHEET 30 AA30 ASP A 41 CYS A 48 -1 O PHE A 42 N GLU A 218 SHEET 1 BA24 MET B 12 VAL B 22 0 SHEET 2 BA24 GLN B 25 SER B 35 -1 O GLN B 25 N VAL B 22 SHEET 3 BA24 GLN B 25 SER B 35 0 SHEET 4 BA24 MET B 12 VAL B 22 -1 O MET B 12 N SER B 35 SHEET 5 BA24 ASP B 41 CYS B 48 0 SHEET 6 BA24 GLN B 25 SER B 35 -1 O VAL B 30 N VAL B 47 SHEET 7 BA24 LEU B 90 PHE B 98 0 SHEET 8 BA24 THR B 103 ASP B 113 -1 O MET B 104 N VAL B 96 SHEET 9 BA24 THR B 103 ASP B 113 0 SHEET 10 BA24 LEU B 90 PHE B 98 -1 O LEU B 90 N TYR B 110 SHEET 11 BA24 CYS B 116 ASP B 126 0 SHEET 12 BA24 MET B 12 VAL B 22 1 O THR B 13 N VAL B 117 SHEET 13 BA24 LEU B 139 ILE B 142 0 SHEET 14 BA24 ALA B 156 THR B 167 -1 O THR B 166 N VAL B 140 SHEET 15 BA24 ASN B 145 PRO B 151 -1 O HIS B 148 N LEU B 160 SHEET 16 BA24 HIS B 195 MET B 204 -1 O HIS B 195 N MET B 149 SHEET 17 BA24 ALA B 156 THR B 167 0 SHEET 18 BA24 LEU B 139 ILE B 142 -1 N VAL B 140 O THR B 166 SHEET 19 BA24 LEU B 172 PHE B 183 0 SHEET 20 BA24 LEU B 90 PHE B 98 -1 O SER B 91 N THR B 182 SHEET 21 BA24 HIS B 195 MET B 204 0 SHEET 22 BA24 ASN B 145 PRO B 151 -1 O ASN B 145 N ILE B 199 SHEET 23 BA24 HIS B 213 HIS B 223 0 SHEET 24 BA24 ASP B 41 CYS B 48 -1 O PHE B 42 N GLU B 218 LINK C ILE A 64 N1 CRQ A 65 1555 1555 1.36 LINK C3 CRQ A 65 N GLU A 68 1555 1555 1.35 LINK C ILE B 64 N1 CRQ B 65 1555 1555 1.36 LINK C3 CRQ B 65 N GLU B 68 1555 1555 1.35 CISPEP 1 PHE A 37 PRO A 38 0 4.97 CISPEP 2 PHE A 86 PRO A 87 0 7.20 CISPEP 3 GLU B 2 GLY B 3 0 0.76 CISPEP 4 PHE B 37 PRO B 38 0 7.78 CISPEP 5 PHE B 86 PRO B 87 0 10.18 SITE 1 AC1 4 ASP A 209 LYS A 210 ARG A 211 HIS A 213 SITE 1 AC2 4 PRO A 154 HOH A2121 HIS B 152 LYS B 180 SITE 1 AC3 6 ARG A 217 LYS B 210 ARG B 227 ILE B 228 SITE 2 AC3 6 THR B 229 HOH B2145 SITE 1 AC4 2 SER A 79 PRO A 192 SITE 1 AC5 1 SER B 79 CRYST1 71.490 73.670 80.260 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013988 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013574 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012460 0.00000