HEADER FLUORESCENT PROTEIN 15-MAY-09 2WIS TITLE FLUORESCENT PROTEIN KILLERRED IN THE BLEACHED STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: KILLERRED; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 2-237; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANTHOMEDUSAE SP. DC-2005; SOURCE 3 ORGANISM_TAXID: 328397; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15-B KEYWDS FLUORESCENT PROTEIN, CALI, ROS, REACTIVE OXYGEN SPECIES EXPDTA X-RAY DIFFRACTION AUTHOR P.CARPENTIER,S.VIOLOT,L.BLANCHOIN,D.BOURGEOIS REVDAT 7 13-DEC-23 2WIS 1 REMARK REVDAT 6 15-NOV-23 2WIS 1 REMARK LINK ATOM REVDAT 5 23-OCT-19 2WIS 1 SEQADV REVDAT 4 06-MAR-19 2WIS 1 REMARK LINK REVDAT 3 07-MAR-18 2WIS 1 SOURCE REVDAT 2 08-SEP-09 2WIS 1 JRNL REVDAT 1 11-AUG-09 2WIS 0 JRNL AUTH P.CARPENTIER,S.VIOLOT,L.BLANCHOIN,D.BOURGEOIS JRNL TITL STRUCTURAL BASIS FOR THE PHOTOTOXICITY OF THE FLUORESCENT JRNL TITL 2 PROTEIN KILLERRED. JRNL REF FEBS LETT. V. 583 2839 2009 JRNL REFN ISSN 0014-5793 JRNL PMID 19646983 JRNL DOI 10.1016/J.FEBSLET.2009.07.041 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 16265 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 842 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1161 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.84 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3597 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.20000 REMARK 3 B22 (A**2) : -0.36000 REMARK 3 B33 (A**2) : 2.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.007 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.350 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.283 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.793 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.887 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3840 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5213 ; 1.570 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 476 ; 6.741 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 185 ;37.040 ;23.946 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 598 ;18.311 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;14.161 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 543 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3049 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2348 ; 0.781 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3816 ; 1.438 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1492 ; 1.634 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1396 ; 2.623 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE CRYSTAL WAS BLEACHED DURING 60 MINUTES UNDER REMARK 3 WHITE LIGHT PRIOR THE DATA COLLECTION REMARK 4 REMARK 4 2WIS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1290039832. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98007 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17145 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 2.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2WIQ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE 0.1M TRIS PH REMARK 280 8.5, 0.05M ASCORBIC ACID, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.97000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.61500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.70000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.61500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.97000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.70000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 VAL A -7 REMARK 465 PRO A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 MET A -1 REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 SER A 230 REMARK 465 ALA A 231 REMARK 465 ILE A 232 REMARK 465 GLY A 233 REMARK 465 SER A 234 REMARK 465 ASP A 235 REMARK 465 GLU A 236 REMARK 465 ASP A 237 REMARK 465 MET B -21 REMARK 465 GLY B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 SER B -11 REMARK 465 SER B -10 REMARK 465 GLY B -9 REMARK 465 LEU B -8 REMARK 465 VAL B -7 REMARK 465 PRO B -6 REMARK 465 ARG B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 HIS B -2 REMARK 465 MET B -1 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 SER B 234 REMARK 465 ASP B 235 REMARK 465 GLU B 236 REMARK 465 ASP B 237 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 230 OG REMARK 470 ILE B 232 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 124 OD2 ASP B 126 1.96 REMARK 500 OG SER B 79 O HOH B 2017 2.08 REMARK 500 O HOH B 2013 O HOH B 2056 2.14 REMARK 500 OG1 THR B 105 O HOH B 2025 2.17 REMARK 500 O HOH B 2045 O HOH B 2056 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 39 -167.26 54.88 REMARK 500 ASP A 101 -164.55 -165.79 REMARK 500 ASP A 113 63.48 -117.46 REMARK 500 ASP A 114 -82.72 69.84 REMARK 500 ASP A 169 1.61 -61.53 REMARK 500 THR A 201 144.83 -26.12 REMARK 500 ARG A 205 59.32 -92.32 REMARK 500 ASP A 206 147.28 -29.09 REMARK 500 THR A 207 109.99 -30.85 REMARK 500 ASP A 209 -122.08 -122.45 REMARK 500 HIS B 39 -162.31 78.78 REMARK 500 THR B 50 34.67 -89.68 REMARK 500 THR B 50 34.67 -95.23 REMARK 500 ASP B 76 119.83 -38.35 REMARK 500 ASN B 100 20.39 48.03 REMARK 500 ASN B 100 21.57 48.03 REMARK 500 ASP B 101 -126.83 -147.49 REMARK 500 ASP B 101 -141.24 -139.00 REMARK 500 ASP B 113 69.71 -117.16 REMARK 500 ASP B 114 -113.83 75.42 REMARK 500 ASP B 169 25.16 -71.67 REMARK 500 SER B 230 -35.05 54.17 REMARK 500 ALA B 231 84.06 172.97 REMARK 500 ILE B 232 79.53 90.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASN B 100 ASP B 101 146.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "BA" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 11-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 12-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1230 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WIQ RELATED DB: PDB REMARK 900 FLUORESCENT PROTEIN KILLERRED IN THE NATIVE STATE DBREF 2WIS A -21 1 PDB 2WIS 2WIS -21 1 DBREF 2WIS A 2 237 UNP Q2TCH5 Q2TCH5_9CNID 2 237 DBREF 2WIS B -21 1 PDB 2WIS 2WIS -21 1 DBREF 2WIS B 2 237 UNP Q2TCH5 Q2TCH5_9CNID 2 237 SEQADV 2WIS CRQ A 65 UNP Q2TCH5 GLN 65 CHROMOPHORE SEQADV 2WIS CRQ A 65 UNP Q2TCH5 TYR 66 CHROMOPHORE SEQADV 2WIS CRQ A 65 UNP Q2TCH5 GLY 67 CHROMOPHORE SEQADV 2WIS CRQ B 65 UNP Q2TCH5 GLN 65 CHROMOPHORE SEQADV 2WIS CRQ B 65 UNP Q2TCH5 TYR 66 CHROMOPHORE SEQADV 2WIS CRQ B 65 UNP Q2TCH5 GLY 67 CHROMOPHORE SEQRES 1 A 257 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 257 LEU VAL PRO ARG GLY SER HIS MET GLY SER GLU GLY GLY SEQRES 3 A 257 PRO ALA LEU PHE GLN SER ASP MET THR PHE LYS ILE PHE SEQRES 4 A 257 ILE ASP GLY GLU VAL ASN GLY GLN LYS PHE THR ILE VAL SEQRES 5 A 257 ALA ASP GLY SER SER LYS PHE PRO HIS GLY ASP PHE ASN SEQRES 6 A 257 VAL HIS ALA VAL CYS GLU THR GLY LYS LEU PRO MET SER SEQRES 7 A 257 TRP LYS PRO ILE CYS HIS LEU ILE CRQ GLU PRO PHE PHE SEQRES 8 A 257 ALA ARG TYR PRO ASP GLY ILE SER HIS PHE ALA GLN GLU SEQRES 9 A 257 CYS PHE PRO GLU GLY LEU SER ILE ASP ARG THR VAL ARG SEQRES 10 A 257 PHE GLU ASN ASP GLY THR MET THR SER HIS HIS THR TYR SEQRES 11 A 257 GLU LEU ASP ASP THR CYS VAL VAL SER ARG ILE THR VAL SEQRES 12 A 257 ASN CYS ASP GLY PHE GLN PRO ASP GLY PRO ILE MET ARG SEQRES 13 A 257 ASP GLN LEU VAL ASP ILE LEU PRO ASN GLU THR HIS MET SEQRES 14 A 257 PHE PRO HIS GLY PRO ASN ALA VAL ARG GLN LEU ALA PHE SEQRES 15 A 257 ILE GLY PHE THR THR ALA ASP GLY GLY LEU MET MET GLY SEQRES 16 A 257 HIS PHE ASP SER LYS MET THR PHE ASN GLY SER ARG ALA SEQRES 17 A 257 ILE GLU ILE PRO GLY PRO HIS PHE VAL THR ILE ILE THR SEQRES 18 A 257 LYS GLN MET ARG ASP THR SER ASP LYS ARG ASP HIS VAL SEQRES 19 A 257 CYS GLN ARG GLU VAL ALA TYR ALA HIS SER VAL PRO ARG SEQRES 20 A 257 ILE THR SER ALA ILE GLY SER ASP GLU ASP SEQRES 1 B 257 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 257 LEU VAL PRO ARG GLY SER HIS MET GLY SER GLU GLY GLY SEQRES 3 B 257 PRO ALA LEU PHE GLN SER ASP MET THR PHE LYS ILE PHE SEQRES 4 B 257 ILE ASP GLY GLU VAL ASN GLY GLN LYS PHE THR ILE VAL SEQRES 5 B 257 ALA ASP GLY SER SER LYS PHE PRO HIS GLY ASP PHE ASN SEQRES 6 B 257 VAL HIS ALA VAL CYS GLU THR GLY LYS LEU PRO MET SER SEQRES 7 B 257 TRP LYS PRO ILE CYS HIS LEU ILE CRQ GLU PRO PHE PHE SEQRES 8 B 257 ALA ARG TYR PRO ASP GLY ILE SER HIS PHE ALA GLN GLU SEQRES 9 B 257 CYS PHE PRO GLU GLY LEU SER ILE ASP ARG THR VAL ARG SEQRES 10 B 257 PHE GLU ASN ASP GLY THR MET THR SER HIS HIS THR TYR SEQRES 11 B 257 GLU LEU ASP ASP THR CYS VAL VAL SER ARG ILE THR VAL SEQRES 12 B 257 ASN CYS ASP GLY PHE GLN PRO ASP GLY PRO ILE MET ARG SEQRES 13 B 257 ASP GLN LEU VAL ASP ILE LEU PRO ASN GLU THR HIS MET SEQRES 14 B 257 PHE PRO HIS GLY PRO ASN ALA VAL ARG GLN LEU ALA PHE SEQRES 15 B 257 ILE GLY PHE THR THR ALA ASP GLY GLY LEU MET MET GLY SEQRES 16 B 257 HIS PHE ASP SER LYS MET THR PHE ASN GLY SER ARG ALA SEQRES 17 B 257 ILE GLU ILE PRO GLY PRO HIS PHE VAL THR ILE ILE THR SEQRES 18 B 257 LYS GLN MET ARG ASP THR SER ASP LYS ARG ASP HIS VAL SEQRES 19 B 257 CYS GLN ARG GLU VAL ALA TYR ALA HIS SER VAL PRO ARG SEQRES 20 B 257 ILE THR SER ALA ILE GLY SER ASP GLU ASP MODRES 2WIS CRQ A 65 GLN MODRES 2WIS CRQ A 65 TYR MODRES 2WIS CRQ A 65 GLY MODRES 2WIS CRQ B 65 GLN MODRES 2WIS CRQ B 65 TYR MODRES 2WIS CRQ B 65 GLY HET CRQ A 65 48 HET CRQ B 65 24 HET NA A1230 1 HET NA B1234 1 HETNAM CRQ [2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY- HETNAM 2 CRQ BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC HETNAM 3 CRQ ACID HETNAM NA SODIUM ION HETSYN CRQ CHROMOPHORE (GLN-TYR-GLY) FORMUL 1 CRQ 2(C16 H16 N4 O5) FORMUL 3 NA 2(NA 1+) FORMUL 5 HOH *77(H2 O) HELIX 1 1 GLY A 3 GLN A 9 5 7 HELIX 2 2 TRP A 57 CYS A 61 5 5 HELIX 3 3 GLU A 68 ALA A 72 5 5 HELIX 4 4 HIS A 80 CYS A 85 1 6 HELIX 5 5 GLY B 3 PHE B 8 1 6 HELIX 6 6 TRP B 57 CYS B 61 5 5 HELIX 7 7 GLU B 68 ALA B 72 5 5 HELIX 8 8 HIS B 80 CYS B 85 1 6 SHEET 1 AA 5 LEU A 139 ILE A 142 0 SHEET 2 AA 5 ALA A 156 THR A 167 -1 O THR A 166 N VAL A 140 SHEET 3 AA 5 ASN A 145 PRO A 151 -1 O HIS A 148 N LEU A 160 SHEET 4 AA 5 HIS A 195 ILE A 199 -1 O HIS A 195 N MET A 149 SHEET 5 AA 5 HIS A 213 HIS A 223 -1 O TYR A 221 N THR A 198 SHEET 1 AB10 LEU A 139 ILE A 142 0 SHEET 2 AB10 ALA A 156 THR A 167 -1 O THR A 166 N VAL A 140 SHEET 3 AB10 LEU A 172 PHE A 183 -1 O MET A 173 N PHE A 165 SHEET 4 AB10 LEU A 90 PHE A 98 -1 O SER A 91 N THR A 182 SHEET 5 AB10 THR A 103 ASP A 113 -1 O MET A 104 N VAL A 96 SHEET 6 AB10 CYS A 116 ASP A 126 -1 O CYS A 116 N ASP A 113 SHEET 7 AB10 MET A 12 VAL A 22 1 O THR A 13 N VAL A 117 SHEET 8 AB10 GLN A 25 SER A 35 -1 O GLN A 25 N VAL A 22 SHEET 9 AB10 ASP A 41 CYS A 48 -1 O ASN A 43 N SER A 34 SHEET 10 AB10 HIS A 213 HIS A 223 -1 O VAL A 214 N ALA A 46 SHEET 1 BA30 MET B 12 VAL B 22 0 SHEET 2 BA30 GLN B 25 SER B 35 -1 O GLN B 25 N VAL B 22 SHEET 3 BA30 ASP B 41 CYS B 48 -1 O ASN B 43 N SER B 34 SHEET 4 BA30 HIS B 213 HIS B 223 -1 O VAL B 214 N ALA B 46 SHEET 5 BA30 HIS B 195 MET B 204 -1 O PHE B 196 N HIS B 223 SHEET 6 BA30 ASN B 145 HIS B 152 -1 O ASN B 145 N ILE B 199 SHEET 7 BA30 ALA B 156 THR B 167 1 O ALA B 156 N HIS B 152 SHEET 8 BA30 LEU B 139 ILE B 142 -1 N VAL B 140 O THR B 166 SHEET 9 BA30 GLN B 25 SER B 35 0 SHEET 10 BA30 MET B 12 VAL B 22 -1 O MET B 12 N SER B 35 SHEET 11 BA30 ASP B 41 CYS B 48 0 SHEET 12 BA30 GLN B 25 SER B 35 -1 O VAL B 30 N VAL B 47 SHEET 13 BA30 LEU B 90 PHE B 98 0 SHEET 14 BA30 THR B 103 LEU B 112 -1 O MET B 104 N VAL B 96 SHEET 15 BA30 THR B 103 LEU B 112 0 SHEET 16 BA30 LEU B 90 PHE B 98 -1 O LEU B 90 N TYR B 110 SHEET 17 BA30 CYS B 116 ASP B 126 0 SHEET 18 BA30 MET B 12 VAL B 22 1 O THR B 13 N VAL B 117 SHEET 19 BA30 LEU B 139 ILE B 142 0 SHEET 20 BA30 ALA B 156 THR B 167 -1 O THR B 166 N VAL B 140 SHEET 21 BA30 ASN B 145 HIS B 152 -1 O HIS B 148 N LEU B 160 SHEET 22 BA30 HIS B 195 MET B 204 -1 O HIS B 195 N MET B 149 SHEET 23 BA30 ALA B 156 THR B 167 0 SHEET 24 BA30 LEU B 139 ILE B 142 -1 N VAL B 140 O THR B 166 SHEET 25 BA30 LEU B 172 PHE B 183 0 SHEET 26 BA30 LEU B 90 PHE B 98 -1 O SER B 91 N THR B 182 SHEET 27 BA30 HIS B 195 MET B 204 0 SHEET 28 BA30 ASN B 145 HIS B 152 -1 O ASN B 145 N ILE B 199 SHEET 29 BA30 HIS B 213 HIS B 223 0 SHEET 30 BA30 ASP B 41 CYS B 48 -1 O PHE B 42 N GLU B 218 LINK C ILE A 64 N1 ACRQ A 65 1555 1555 1.33 LINK C ILE A 64 N1 BCRQ A 65 1555 1555 1.33 LINK C3 ACRQ A 65 N GLU A 68 1555 1555 1.33 LINK C3 BCRQ A 65 N GLU A 68 1555 1555 1.33 LINK C ILE B 64 N1 CRQ B 65 1555 1555 1.36 LINK C3 CRQ B 65 N GLU B 68 1555 1555 1.34 CISPEP 1 PHE A 37 PRO A 38 0 6.08 CISPEP 2 PHE A 86 PRO A 87 0 3.14 CISPEP 3 GLU B 2 GLY B 3 0 0.27 CISPEP 4 PHE B 37 PRO B 38 0 7.69 CISPEP 5 PHE B 86 PRO B 87 0 1.65 CISPEP 6 ALA B 231 ILE B 232 0 3.30 CISPEP 7 ILE B 232 GLY B 233 0 -4.37 SITE 1 AC1 3 SER B 79 PRO B 192 GLY B 193 SITE 1 AC2 2 GLY A 77 SER A 79 CRYST1 71.940 73.400 75.230 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013624 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013293 0.00000