data_2WJ0 # _entry.id 2WJ0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2WJ0 pdb_00002wj0 10.2210/pdb2wj0/pdb PDBE EBI-39865 ? ? WWPDB D_1290039865 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2WCZ unspecified '1.6A RESOLUTION STRUCTURE OF ARCHAEOGLOBUS FULGIDUS HJC, A HOLLIDAY JUNCTION RESOLVASE FROM AN ARCHAEAL HYPERTHERMOPHILE' PDB 2WCW unspecified '1.6A RESOLUTION STRUCTURE OF ARCHAEOGLOBUS FULGIDUS HJC, A HOLLIDAY JUNCTION RESOLVASE FROM AN ARCHAEAL HYPERTHERMOPHILE' PDB 2WIW unspecified 'CRYSTAL STRUCTURES OF HOLLIDAY JUNCTION RESOLVASES FROM ARCHAEOGLOBUS FULGIDUS BOUND TO DNA SUBSTRATE' PDB 2WIZ unspecified 'CRYSTAL STRUCTURES OF HOLLIDAY JUNCTION RESOLVASES FROM ARCHAEOGLOBUS FULGIDUS BOUND TO DNA SUBSTRATE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2WJ0 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-05-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Carolis, C.' 1 'Koehler, C.' 2 'Sauter, C.' 3 'Basquin, J.' 4 'Suck, D.' 5 'Toeroe, I.' 6 # _citation.id primary _citation.title 'Crystal Structures of Holliday Junction Resolvases from Archaeoglobus Fulgidus Bound to DNA Substrate' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Carolis, C.' 1 ? primary 'Koehler, C.' 2 ? primary 'Sauter, C.' 3 ? primary 'Basquin, J.' 4 ? primary 'Suck, D.' 5 ? primary 'Toeroe, I.' 6 ? # _cell.entry_id 2WJ0 _cell.length_a 110.980 _cell.length_b 110.980 _cell.length_c 150.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WJ0 _symmetry.space_group_name_H-M 'P 63 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ARCHAEAL HJC' 15674.213 2 ? ? 'RESIDUES 2-136' 'N-TERMINUS CONTAINS EXTRA RESIDUES AS A RESULT OF CLONING PROCEDURE' 2 polymer syn HALF-JUNCTION 7370.753 1 ? ? ? SYNTHESIZED 3 polymer syn HALF-JUNCTION 7370.753 1 ? ? ? SYNTHESIZED 4 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 1 ? ? ? ? 5 water nat water 18.015 7 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GTMGKSKGTRFERDLLVELWKAGFAAIRVAGSGVSPFPCPDIVAGNGRTYLAIEVKMRKELPLYLSADEVEQLVTFARGF GAEAYVALKLPRKKWRFFPVQMLERTEKNFKIDESVYPLGLEIAEVAGKFFQERFGEKV ; ;GTMGKSKGTRFERDLLVELWKAGFAAIRVAGSGVSPFPCPDIVAGNGRTYLAIEVKMRKELPLYLSADEVEQLVTFARGF GAEAYVALKLPRKKWRFFPVQMLERTEKNFKIDESVYPLGLEIAEVAGKFFQERFGEKV ; A,B ? 2 polydeoxyribonucleotide no no ;(DG)(DG)(DG)(DG)(DA)(DT)(DC)(DC)(DC)(DT)(DA)(DA)(DG)(DC)(DT)(DC)(DC)(DA)(DT)(DC) (DG)(DA)(DT)(DG) ; GGGGATCCCTAAGCTCCATCGATG C ? 3 polydeoxyribonucleotide no no ;(DC)(DA)(DT)(DC)(DG)(DA)(DT)(DG)(DG)(DA)(DG)(DC)(DT)(DT)(DA)(DG)(DG)(DG)(DA)(DT) (DC)(DC)(DC)(DC) ; CATCGATGGAGCTTAGGGATCCCC D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 THR n 1 3 MET n 1 4 GLY n 1 5 LYS n 1 6 SER n 1 7 LYS n 1 8 GLY n 1 9 THR n 1 10 ARG n 1 11 PHE n 1 12 GLU n 1 13 ARG n 1 14 ASP n 1 15 LEU n 1 16 LEU n 1 17 VAL n 1 18 GLU n 1 19 LEU n 1 20 TRP n 1 21 LYS n 1 22 ALA n 1 23 GLY n 1 24 PHE n 1 25 ALA n 1 26 ALA n 1 27 ILE n 1 28 ARG n 1 29 VAL n 1 30 ALA n 1 31 GLY n 1 32 SER n 1 33 GLY n 1 34 VAL n 1 35 SER n 1 36 PRO n 1 37 PHE n 1 38 PRO n 1 39 CYS n 1 40 PRO n 1 41 ASP n 1 42 ILE n 1 43 VAL n 1 44 ALA n 1 45 GLY n 1 46 ASN n 1 47 GLY n 1 48 ARG n 1 49 THR n 1 50 TYR n 1 51 LEU n 1 52 ALA n 1 53 ILE n 1 54 GLU n 1 55 VAL n 1 56 LYS n 1 57 MET n 1 58 ARG n 1 59 LYS n 1 60 GLU n 1 61 LEU n 1 62 PRO n 1 63 LEU n 1 64 TYR n 1 65 LEU n 1 66 SER n 1 67 ALA n 1 68 ASP n 1 69 GLU n 1 70 VAL n 1 71 GLU n 1 72 GLN n 1 73 LEU n 1 74 VAL n 1 75 THR n 1 76 PHE n 1 77 ALA n 1 78 ARG n 1 79 GLY n 1 80 PHE n 1 81 GLY n 1 82 ALA n 1 83 GLU n 1 84 ALA n 1 85 TYR n 1 86 VAL n 1 87 ALA n 1 88 LEU n 1 89 LYS n 1 90 LEU n 1 91 PRO n 1 92 ARG n 1 93 LYS n 1 94 LYS n 1 95 TRP n 1 96 ARG n 1 97 PHE n 1 98 PHE n 1 99 PRO n 1 100 VAL n 1 101 GLN n 1 102 MET n 1 103 LEU n 1 104 GLU n 1 105 ARG n 1 106 THR n 1 107 GLU n 1 108 LYS n 1 109 ASN n 1 110 PHE n 1 111 LYS n 1 112 ILE n 1 113 ASP n 1 114 GLU n 1 115 SER n 1 116 VAL n 1 117 TYR n 1 118 PRO n 1 119 LEU n 1 120 GLY n 1 121 LEU n 1 122 GLU n 1 123 ILE n 1 124 ALA n 1 125 GLU n 1 126 VAL n 1 127 ALA n 1 128 GLY n 1 129 LYS n 1 130 PHE n 1 131 PHE n 1 132 GLN n 1 133 GLU n 1 134 ARG n 1 135 PHE n 1 136 GLY n 1 137 GLU n 1 138 LYS n 1 139 VAL n 2 1 DG n 2 2 DG n 2 3 DG n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DC n 2 8 DC n 2 9 DC n 2 10 DT n 2 11 DA n 2 12 DA n 2 13 DG n 2 14 DC n 2 15 DT n 2 16 DC n 2 17 DC n 2 18 DA n 2 19 DT n 2 20 DC n 2 21 DG n 2 22 DA n 2 23 DT n 2 24 DG n 3 1 DC n 3 2 DA n 3 3 DT n 3 4 DC n 3 5 DG n 3 6 DA n 3 7 DT n 3 8 DG n 3 9 DG n 3 10 DA n 3 11 DG n 3 12 DC n 3 13 DT n 3 14 DT n 3 15 DA n 3 16 DG n 3 17 DG n 3 18 DG n 3 19 DA n 3 20 DT n 3 21 DC n 3 22 DC n 3 23 DC n 3 24 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 4304 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'ARCHAEOGLOBUS FULGIDUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2234 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 49558 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant PLYSS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETM12 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'GERMAN COLLECTION OF MICROORGANISMS (DSM)' # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 'SYNTHESIZED BY METABION GMBH, MARTINSRIED, GERMANY' 3 1 sample ? ? 'SYNTHETIC CONSTRUCT' ? 32630 'SYNTHESIZED BY METABION GMBH, MARTINSRIED, GERMANY' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2WJ0 1 ? ? 2WJ0 ? 2 UNP O28314_ARCFU 1 ? ? O28314 ? 3 PDB 2WJ0 2 ? ? 2WJ0 ? 4 PDB 2WJ0 3 ? ? 2WJ0 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2WJ0 A 1 ? 4 ? 2WJ0 -2 ? 1 ? -2 1 2 2 2WJ0 A 5 ? 139 ? O28314 2 ? 136 ? 2 136 3 1 2WJ0 B 1 ? 4 ? 2WJ0 -2 ? 1 ? -2 1 4 2 2WJ0 B 5 ? 139 ? O28314 2 ? 136 ? 2 136 5 3 2WJ0 C 1 ? 24 ? 2WJ0 1 ? 24 ? 1 24 6 4 2WJ0 D 1 ? 24 ? 2WJ0 1 ? 24 ? 1 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2WJ0 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.2 _exptl_crystal.density_percent_sol 61.3 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% W/V PEG 3350, 0.2 M TRI-LITHIUM CITRATE TETRAHYDRATE, 0.01M HEXAAMINE- COBALT(III) CHLORIDE, pH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2008-10-04 _diffrn_detector.details 'PT COATED MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI (111) MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength 0.8726 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2WJ0 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 3.10 _reflns.number_obs 9975 _reflns.number_all ? _reflns.percent_possible_obs 95.1 _reflns.pdbx_Rmerge_I_obs 0.14 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.18 _reflns.B_iso_Wilson_estimate 68.13 _reflns.pdbx_redundancy 11.86 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.10 _reflns_shell.d_res_low 3.18 _reflns_shell.percent_possible_all 86.3 _reflns_shell.Rmerge_I_obs 0.89 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.89 _reflns_shell.pdbx_redundancy 12.41 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2WJ0 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 9975 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.02 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.056 _refine.ls_d_res_high 3.100 _refine.ls_percent_reflns_obs 95.17 _refine.ls_R_factor_obs 0.2051 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2015 _refine.ls_R_factor_R_free 0.2781 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 484 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 86.84 _refine.aniso_B[1][1] -5.3845 _refine.aniso_B[2][2] -5.3845 _refine.aniso_B[3][3] 10.6682 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.342 _refine.solvent_model_param_bsol 74.706 _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 1.40 _refine.pdbx_ls_cross_valid_method ? _refine.details ;WATSON-CRICK BASE PAIRING WAS RESTRAINED BY GEOMETRY_RESTRAINTS.EDITS WITH BOND PARAMETERS DERIVED FROM DNA-RNA_RESTRAINTS.DEF FILE OF CNS. AS THE HOLLIDAY JUNCTION SITS ON A TWO-FOLD SYMMETRY AXIS THE HALF JUNCTION HAS BEEN MODELED USING ONE OF THE CONTINUOUS STRAND (STRAND 2) AND ITS COMPLEMENTARY STRAND AS THE CROSSOVER STRAND. THUS THE CROSSOVER STRAND IN THE HALF-JUNCTION IS A CHIMERA OF THE REAL SEQUENCES (STRANDS 1 AND 3). ; _refine.pdbx_starting_model 'PDB ENTRY 2WIZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.42 _refine.pdbx_overall_phase_error 25.94 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1991 _refine_hist.pdbx_number_atoms_nucleic_acid 978 _refine_hist.pdbx_number_atoms_ligand 7 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 2983 _refine_hist.d_res_high 3.100 _refine_hist.d_res_low 48.056 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 3251 'X-RAY DIFFRACTION' ? f_angle_d 1.047 ? ? 4451 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 23.753 ? ? 1227 'X-RAY DIFFRACTION' ? f_chiral_restr 0.053 ? ? 486 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 399 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 3.1001 3.5486 2886 0.2491 90.00 0.3193 . . 146 . . 'X-RAY DIFFRACTION' . 3.5486 4.4704 3157 0.1988 97.00 0.2565 . . 174 . . 'X-RAY DIFFRACTION' . 4.4704 48.0615 3448 0.1863 99.00 0.2774 . . 164 . . # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.082950 _struct_ncs_oper.matrix[1][2] -0.203500 _struct_ncs_oper.matrix[1][3] -0.975600 _struct_ncs_oper.matrix[2][1] -0.238400 _struct_ncs_oper.matrix[2][2] -0.954600 _struct_ncs_oper.matrix[2][3] 0.178800 _struct_ncs_oper.matrix[3][1] -0.967600 _struct_ncs_oper.matrix[3][2] 0.217700 _struct_ncs_oper.matrix[3][3] -0.127700 _struct_ncs_oper.vector[1] 31.12000 _struct_ncs_oper.vector[2] -99.87000 _struct_ncs_oper.vector[3] 57.28000 # _struct.entry_id 2WJ0 _struct.title 'Crystal structures of Holliday junction resolvases from Archaeoglobus fulgidus bound to DNA substrate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2WJ0 _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text ;HYDROLASE DNA COMPLEX, TYPE II RESTRICTION ENDONUCLEASE, HOLLIDAY JUNCTION RESOLVASE, HYDROLASE, DNA BINDING PROTEIN, HYDROLASE-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 7 ? ALA A 22 ? LYS A 4 ALA A 19 1 ? 16 HELX_P HELX_P2 2 ALA A 67 ? GLY A 81 ? ALA A 64 GLY A 78 1 ? 15 HELX_P HELX_P3 3 GLN A 101 ? LEU A 103 ? GLN A 98 LEU A 100 5 ? 3 HELX_P HELX_P4 4 VAL A 116 ? GLY A 120 ? VAL A 113 GLY A 117 5 ? 5 HELX_P HELX_P5 5 GLU A 122 ? GLY A 128 ? GLU A 119 GLY A 125 1 ? 7 HELX_P HELX_P6 6 GLY B 8 ? ALA B 22 ? GLY B 5 ALA B 19 1 ? 15 HELX_P HELX_P7 7 ALA B 67 ? GLY B 81 ? ALA B 64 GLY B 78 1 ? 15 HELX_P HELX_P8 8 VAL B 116 ? GLY B 120 ? VAL B 113 GLY B 117 5 ? 5 HELX_P HELX_P9 9 GLU B 122 ? LYS B 129 ? GLU B 119 LYS B 126 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 24 N3 ? ? C DG 1 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 24 O2 ? ? C DG 1 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 24 N4 ? ? C DG 1 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 23 N3 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 23 O2 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 23 N4 ? ? C DG 2 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 22 N3 ? ? C DG 3 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 22 O2 ? ? C DG 3 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 22 N4 ? ? C DG 3 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 21 N3 ? ? C DG 4 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 21 O2 ? ? C DG 4 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 21 N4 ? ? C DG 4 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 20 N3 ? ? C DA 5 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 20 O4 ? ? C DA 5 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 19 N1 ? ? C DT 6 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 19 N6 ? ? C DT 6 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 18 N1 ? ? C DC 7 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 18 O6 ? ? C DC 7 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 18 N2 ? ? C DC 7 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 17 N1 ? ? C DC 8 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 17 O6 ? ? C DC 8 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 17 N2 ? ? C DC 8 D DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 16 N1 ? ? C DC 9 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 16 O6 ? ? C DC 9 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 16 N2 ? ? C DC 9 D DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 15 N1 ? ? C DT 10 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 15 N6 ? ? C DT 10 D DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 14 N3 ? ? C DA 11 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 14 O4 ? ? C DA 11 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 13 N3 ? ? C DA 12 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 13 O4 ? ? C DA 12 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 61 A . ? LEU 58 A PRO 62 A ? PRO 59 A 1 1.21 2 LEU 61 B . ? LEU 58 B PRO 62 B ? PRO 59 B 1 0.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 3 ? BA ? 5 ? BB ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? parallel BA 4 5 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ALA A 25 ? ARG A 28 ? ALA A 22 ARG A 25 AA 2 ILE A 42 ? GLY A 45 ? ILE A 39 GLY A 42 AA 3 TYR A 50 ? MET A 57 ? TYR A 47 MET A 54 AA 4 GLU A 83 ? LYS A 89 ? GLU A 80 LYS A 86 AA 5 ARG A 96 ? PRO A 99 ? ARG A 93 PRO A 96 AB 1 LEU A 63 ? SER A 66 ? LEU A 60 SER A 63 AB 2 ASN A 109 ? ILE A 112 ? ASN A 106 ILE A 109 AB 3 GLU A 104 ? ARG A 105 ? GLU A 101 ARG A 102 BA 1 ALA B 25 ? ARG B 28 ? ALA B 22 ARG B 25 BA 2 ILE B 42 ? GLY B 45 ? ILE B 39 GLY B 42 BA 3 TYR B 50 ? MET B 57 ? TYR B 47 MET B 54 BA 4 GLU B 83 ? LYS B 89 ? GLU B 80 LYS B 86 BA 5 PHE B 97 ? PRO B 99 ? PHE B 94 PRO B 96 BB 1 LEU B 63 ? SER B 66 ? LEU B 60 SER B 63 BB 2 ASN B 109 ? ILE B 112 ? ASN B 106 ILE B 109 BB 3 GLU B 104 ? ARG B 105 ? GLU B 101 ARG B 102 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 27 ? N ILE A 24 O VAL A 43 ? O VAL A 40 AA 2 3 N ALA A 44 ? N ALA A 41 O LEU A 51 ? O LEU A 48 AA 3 4 N ALA A 52 ? N ALA A 49 O GLU A 83 ? O GLU A 80 AA 4 5 N LEU A 88 ? N LEU A 85 O ARG A 96 ? O ARG A 93 AB 1 2 N LEU A 65 ? N LEU A 62 O PHE A 110 ? O PHE A 107 AB 2 3 N LYS A 111 ? N LYS A 108 O GLU A 104 ? O GLU A 101 BA 1 2 N ILE B 27 ? N ILE B 24 O VAL B 43 ? O VAL B 40 BA 2 3 N ALA B 44 ? N ALA B 41 O LEU B 51 ? O LEU B 48 BA 3 4 N ALA B 52 ? N ALA B 49 O GLU B 83 ? O GLU B 80 BA 4 5 N VAL B 86 ? N VAL B 83 O PHE B 98 ? O PHE B 95 BB 1 2 N LEU B 65 ? N LEU B 62 O PHE B 110 ? O PHE B 107 BB 2 3 N LYS B 111 ? N LYS B 108 O GLU B 104 ? O GLU B 101 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id NCO _struct_site.pdbx_auth_seq_id 1129 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE NCO B 1129' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 SER B 32 ? SER B 29 . ? 1_555 ? 2 AC1 9 PRO B 36 ? PRO B 33 . ? 1_555 ? 3 AC1 9 PHE B 37 ? PHE B 34 . ? 1_555 ? 4 AC1 9 CYS B 39 ? CYS B 36 . ? 1_555 ? 5 AC1 9 ASP B 41 ? ASP B 38 . ? 1_555 ? 6 AC1 9 GLU B 54 ? GLU B 51 . ? 1_555 ? 7 AC1 9 GLN B 72 ? GLN B 69 . ? 1_555 ? 8 AC1 9 DG C 13 ? DG C 13 . ? 1_555 ? 9 AC1 9 DC C 14 ? DC C 14 . ? 1_555 ? # _database_PDB_matrix.entry_id 2WJ0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2WJ0 _atom_sites.fract_transf_matrix[1][1] 0.009011 _atom_sites.fract_transf_matrix[1][2] 0.005202 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010405 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006645 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 THR 2 -1 ? ? ? A . n A 1 3 MET 3 0 ? ? ? A . n A 1 4 GLY 4 1 ? ? ? A . n A 1 5 LYS 5 2 ? ? ? A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 LYS 7 4 4 LYS LYS A . n A 1 8 GLY 8 5 5 GLY GLY A . n A 1 9 THR 9 6 6 THR THR A . n A 1 10 ARG 10 7 7 ARG ARG A . n A 1 11 PHE 11 8 8 PHE PHE A . n A 1 12 GLU 12 9 9 GLU GLU A . n A 1 13 ARG 13 10 10 ARG ARG A . n A 1 14 ASP 14 11 11 ASP ASP A . n A 1 15 LEU 15 12 12 LEU LEU A . n A 1 16 LEU 16 13 13 LEU LEU A . n A 1 17 VAL 17 14 14 VAL VAL A . n A 1 18 GLU 18 15 15 GLU GLU A . n A 1 19 LEU 19 16 16 LEU LEU A . n A 1 20 TRP 20 17 17 TRP TRP A . n A 1 21 LYS 21 18 18 LYS LYS A . n A 1 22 ALA 22 19 19 ALA ALA A . n A 1 23 GLY 23 20 20 GLY GLY A . n A 1 24 PHE 24 21 21 PHE PHE A . n A 1 25 ALA 25 22 22 ALA ALA A . n A 1 26 ALA 26 23 23 ALA ALA A . n A 1 27 ILE 27 24 24 ILE ILE A . n A 1 28 ARG 28 25 25 ARG ARG A . n A 1 29 VAL 29 26 26 VAL VAL A . n A 1 30 ALA 30 27 27 ALA ALA A . n A 1 31 GLY 31 28 28 GLY GLY A . n A 1 32 SER 32 29 29 SER SER A . n A 1 33 GLY 33 30 30 GLY GLY A . n A 1 34 VAL 34 31 31 VAL VAL A . n A 1 35 SER 35 32 32 SER SER A . n A 1 36 PRO 36 33 33 PRO PRO A . n A 1 37 PHE 37 34 34 PHE PHE A . n A 1 38 PRO 38 35 35 PRO PRO A . n A 1 39 CYS 39 36 36 CYS CYS A . n A 1 40 PRO 40 37 37 PRO PRO A . n A 1 41 ASP 41 38 38 ASP ASP A . n A 1 42 ILE 42 39 39 ILE ILE A . n A 1 43 VAL 43 40 40 VAL VAL A . n A 1 44 ALA 44 41 41 ALA ALA A . n A 1 45 GLY 45 42 42 GLY GLY A . n A 1 46 ASN 46 43 43 ASN ASN A . n A 1 47 GLY 47 44 44 GLY GLY A . n A 1 48 ARG 48 45 45 ARG ARG A . n A 1 49 THR 49 46 46 THR THR A . n A 1 50 TYR 50 47 47 TYR TYR A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 ALA 52 49 49 ALA ALA A . n A 1 53 ILE 53 50 50 ILE ILE A . n A 1 54 GLU 54 51 51 GLU GLU A . n A 1 55 VAL 55 52 52 VAL VAL A . n A 1 56 LYS 56 53 53 LYS LYS A . n A 1 57 MET 57 54 54 MET MET A . n A 1 58 ARG 58 55 55 ARG ARG A . n A 1 59 LYS 59 56 56 LYS LYS A . n A 1 60 GLU 60 57 57 GLU GLU A . n A 1 61 LEU 61 58 58 LEU LEU A . n A 1 62 PRO 62 59 59 PRO PRO A . n A 1 63 LEU 63 60 60 LEU LEU A . n A 1 64 TYR 64 61 61 TYR TYR A . n A 1 65 LEU 65 62 62 LEU LEU A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 ALA 67 64 64 ALA ALA A . n A 1 68 ASP 68 65 65 ASP ASP A . n A 1 69 GLU 69 66 66 GLU GLU A . n A 1 70 VAL 70 67 67 VAL VAL A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 GLN 72 69 69 GLN GLN A . n A 1 73 LEU 73 70 70 LEU LEU A . n A 1 74 VAL 74 71 71 VAL VAL A . n A 1 75 THR 75 72 72 THR THR A . n A 1 76 PHE 76 73 73 PHE PHE A . n A 1 77 ALA 77 74 74 ALA ALA A . n A 1 78 ARG 78 75 75 ARG ARG A . n A 1 79 GLY 79 76 76 GLY GLY A . n A 1 80 PHE 80 77 77 PHE PHE A . n A 1 81 GLY 81 78 78 GLY GLY A . n A 1 82 ALA 82 79 79 ALA ALA A . n A 1 83 GLU 83 80 80 GLU GLU A . n A 1 84 ALA 84 81 81 ALA ALA A . n A 1 85 TYR 85 82 82 TYR TYR A . n A 1 86 VAL 86 83 83 VAL VAL A . n A 1 87 ALA 87 84 84 ALA ALA A . n A 1 88 LEU 88 85 85 LEU LEU A . n A 1 89 LYS 89 86 86 LYS LYS A . n A 1 90 LEU 90 87 87 LEU LEU A . n A 1 91 PRO 91 88 88 PRO PRO A . n A 1 92 ARG 92 89 89 ARG ARG A . n A 1 93 LYS 93 90 90 LYS LYS A . n A 1 94 LYS 94 91 91 LYS LYS A . n A 1 95 TRP 95 92 92 TRP TRP A . n A 1 96 ARG 96 93 93 ARG ARG A . n A 1 97 PHE 97 94 94 PHE PHE A . n A 1 98 PHE 98 95 95 PHE PHE A . n A 1 99 PRO 99 96 96 PRO PRO A . n A 1 100 VAL 100 97 97 VAL VAL A . n A 1 101 GLN 101 98 98 GLN GLN A . n A 1 102 MET 102 99 99 MET MET A . n A 1 103 LEU 103 100 100 LEU LEU A . n A 1 104 GLU 104 101 101 GLU GLU A . n A 1 105 ARG 105 102 102 ARG ARG A . n A 1 106 THR 106 103 103 THR THR A . n A 1 107 GLU 107 104 104 GLU GLU A . n A 1 108 LYS 108 105 105 LYS LYS A . n A 1 109 ASN 109 106 106 ASN ASN A . n A 1 110 PHE 110 107 107 PHE PHE A . n A 1 111 LYS 111 108 108 LYS LYS A . n A 1 112 ILE 112 109 109 ILE ILE A . n A 1 113 ASP 113 110 110 ASP ASP A . n A 1 114 GLU 114 111 111 GLU GLU A . n A 1 115 SER 115 112 112 SER SER A . n A 1 116 VAL 116 113 113 VAL VAL A . n A 1 117 TYR 117 114 114 TYR TYR A . n A 1 118 PRO 118 115 115 PRO PRO A . n A 1 119 LEU 119 116 116 LEU LEU A . n A 1 120 GLY 120 117 117 GLY GLY A . n A 1 121 LEU 121 118 118 LEU LEU A . n A 1 122 GLU 122 119 119 GLU GLU A . n A 1 123 ILE 123 120 120 ILE ILE A . n A 1 124 ALA 124 121 121 ALA ALA A . n A 1 125 GLU 125 122 122 GLU GLU A . n A 1 126 VAL 126 123 123 VAL VAL A . n A 1 127 ALA 127 124 124 ALA ALA A . n A 1 128 GLY 128 125 125 GLY GLY A . n A 1 129 LYS 129 126 126 LYS LYS A . n A 1 130 PHE 130 127 127 PHE PHE A . n A 1 131 PHE 131 128 ? ? ? A . n A 1 132 GLN 132 129 ? ? ? A . n A 1 133 GLU 133 130 ? ? ? A . n A 1 134 ARG 134 131 ? ? ? A . n A 1 135 PHE 135 132 ? ? ? A . n A 1 136 GLY 136 133 ? ? ? A . n A 1 137 GLU 137 134 ? ? ? A . n A 1 138 LYS 138 135 ? ? ? A . n A 1 139 VAL 139 136 ? ? ? A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 THR 2 -1 ? ? ? B . n B 1 3 MET 3 0 ? ? ? B . n B 1 4 GLY 4 1 ? ? ? B . n B 1 5 LYS 5 2 ? ? ? B . n B 1 6 SER 6 3 ? ? ? B . n B 1 7 LYS 7 4 4 LYS LYS B . n B 1 8 GLY 8 5 5 GLY GLY B . n B 1 9 THR 9 6 6 THR THR B . n B 1 10 ARG 10 7 7 ARG ARG B . n B 1 11 PHE 11 8 8 PHE PHE B . n B 1 12 GLU 12 9 9 GLU GLU B . n B 1 13 ARG 13 10 10 ARG ARG B . n B 1 14 ASP 14 11 11 ASP ASP B . n B 1 15 LEU 15 12 12 LEU LEU B . n B 1 16 LEU 16 13 13 LEU LEU B . n B 1 17 VAL 17 14 14 VAL VAL B . n B 1 18 GLU 18 15 15 GLU GLU B . n B 1 19 LEU 19 16 16 LEU LEU B . n B 1 20 TRP 20 17 17 TRP TRP B . n B 1 21 LYS 21 18 18 LYS LYS B . n B 1 22 ALA 22 19 19 ALA ALA B . n B 1 23 GLY 23 20 20 GLY GLY B . n B 1 24 PHE 24 21 21 PHE PHE B . n B 1 25 ALA 25 22 22 ALA ALA B . n B 1 26 ALA 26 23 23 ALA ALA B . n B 1 27 ILE 27 24 24 ILE ILE B . n B 1 28 ARG 28 25 25 ARG ARG B . n B 1 29 VAL 29 26 26 VAL VAL B . n B 1 30 ALA 30 27 27 ALA ALA B . n B 1 31 GLY 31 28 28 GLY GLY B . n B 1 32 SER 32 29 29 SER SER B . n B 1 33 GLY 33 30 30 GLY GLY B . n B 1 34 VAL 34 31 31 VAL VAL B . n B 1 35 SER 35 32 32 SER SER B . n B 1 36 PRO 36 33 33 PRO PRO B . n B 1 37 PHE 37 34 34 PHE PHE B . n B 1 38 PRO 38 35 35 PRO PRO B . n B 1 39 CYS 39 36 36 CYS CYS B . n B 1 40 PRO 40 37 37 PRO PRO B . n B 1 41 ASP 41 38 38 ASP ASP B . n B 1 42 ILE 42 39 39 ILE ILE B . n B 1 43 VAL 43 40 40 VAL VAL B . n B 1 44 ALA 44 41 41 ALA ALA B . n B 1 45 GLY 45 42 42 GLY GLY B . n B 1 46 ASN 46 43 43 ASN ASN B . n B 1 47 GLY 47 44 44 GLY GLY B . n B 1 48 ARG 48 45 45 ARG ARG B . n B 1 49 THR 49 46 46 THR THR B . n B 1 50 TYR 50 47 47 TYR TYR B . n B 1 51 LEU 51 48 48 LEU LEU B . n B 1 52 ALA 52 49 49 ALA ALA B . n B 1 53 ILE 53 50 50 ILE ILE B . n B 1 54 GLU 54 51 51 GLU GLU B . n B 1 55 VAL 55 52 52 VAL VAL B . n B 1 56 LYS 56 53 53 LYS LYS B . n B 1 57 MET 57 54 54 MET MET B . n B 1 58 ARG 58 55 55 ARG ARG B . n B 1 59 LYS 59 56 56 LYS LYS B . n B 1 60 GLU 60 57 57 GLU GLU B . n B 1 61 LEU 61 58 58 LEU LEU B . n B 1 62 PRO 62 59 59 PRO PRO B . n B 1 63 LEU 63 60 60 LEU LEU B . n B 1 64 TYR 64 61 61 TYR TYR B . n B 1 65 LEU 65 62 62 LEU LEU B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 ALA 67 64 64 ALA ALA B . n B 1 68 ASP 68 65 65 ASP ASP B . n B 1 69 GLU 69 66 66 GLU GLU B . n B 1 70 VAL 70 67 67 VAL VAL B . n B 1 71 GLU 71 68 68 GLU GLU B . n B 1 72 GLN 72 69 69 GLN GLN B . n B 1 73 LEU 73 70 70 LEU LEU B . n B 1 74 VAL 74 71 71 VAL VAL B . n B 1 75 THR 75 72 72 THR THR B . n B 1 76 PHE 76 73 73 PHE PHE B . n B 1 77 ALA 77 74 74 ALA ALA B . n B 1 78 ARG 78 75 75 ARG ARG B . n B 1 79 GLY 79 76 76 GLY GLY B . n B 1 80 PHE 80 77 77 PHE PHE B . n B 1 81 GLY 81 78 78 GLY GLY B . n B 1 82 ALA 82 79 79 ALA ALA B . n B 1 83 GLU 83 80 80 GLU GLU B . n B 1 84 ALA 84 81 81 ALA ALA B . n B 1 85 TYR 85 82 82 TYR TYR B . n B 1 86 VAL 86 83 83 VAL VAL B . n B 1 87 ALA 87 84 84 ALA ALA B . n B 1 88 LEU 88 85 85 LEU LEU B . n B 1 89 LYS 89 86 86 LYS LYS B . n B 1 90 LEU 90 87 87 LEU LEU B . n B 1 91 PRO 91 88 88 PRO PRO B . n B 1 92 ARG 92 89 89 ARG ARG B . n B 1 93 LYS 93 90 90 LYS LYS B . n B 1 94 LYS 94 91 91 LYS LYS B . n B 1 95 TRP 95 92 92 TRP TRP B . n B 1 96 ARG 96 93 93 ARG ARG B . n B 1 97 PHE 97 94 94 PHE PHE B . n B 1 98 PHE 98 95 95 PHE PHE B . n B 1 99 PRO 99 96 96 PRO PRO B . n B 1 100 VAL 100 97 97 VAL VAL B . n B 1 101 GLN 101 98 98 GLN GLN B . n B 1 102 MET 102 99 99 MET MET B . n B 1 103 LEU 103 100 100 LEU LEU B . n B 1 104 GLU 104 101 101 GLU GLU B . n B 1 105 ARG 105 102 102 ARG ARG B . n B 1 106 THR 106 103 103 THR THR B . n B 1 107 GLU 107 104 104 GLU GLU B . n B 1 108 LYS 108 105 105 LYS LYS B . n B 1 109 ASN 109 106 106 ASN ASN B . n B 1 110 PHE 110 107 107 PHE PHE B . n B 1 111 LYS 111 108 108 LYS LYS B . n B 1 112 ILE 112 109 109 ILE ILE B . n B 1 113 ASP 113 110 110 ASP ASP B . n B 1 114 GLU 114 111 111 GLU GLU B . n B 1 115 SER 115 112 112 SER SER B . n B 1 116 VAL 116 113 113 VAL VAL B . n B 1 117 TYR 117 114 114 TYR TYR B . n B 1 118 PRO 118 115 115 PRO PRO B . n B 1 119 LEU 119 116 116 LEU LEU B . n B 1 120 GLY 120 117 117 GLY GLY B . n B 1 121 LEU 121 118 118 LEU LEU B . n B 1 122 GLU 122 119 119 GLU GLU B . n B 1 123 ILE 123 120 120 ILE ILE B . n B 1 124 ALA 124 121 121 ALA ALA B . n B 1 125 GLU 125 122 122 GLU GLU B . n B 1 126 VAL 126 123 123 VAL VAL B . n B 1 127 ALA 127 124 124 ALA ALA B . n B 1 128 GLY 128 125 125 GLY GLY B . n B 1 129 LYS 129 126 126 LYS LYS B . n B 1 130 PHE 130 127 127 PHE PHE B . n B 1 131 PHE 131 128 128 PHE PHE B . n B 1 132 GLN 132 129 ? ? ? B . n B 1 133 GLU 133 130 ? ? ? B . n B 1 134 ARG 134 131 ? ? ? B . n B 1 135 PHE 135 132 ? ? ? B . n B 1 136 GLY 136 133 ? ? ? B . n B 1 137 GLU 137 134 ? ? ? B . n B 1 138 LYS 138 135 ? ? ? B . n B 1 139 VAL 139 136 ? ? ? B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DG 2 2 2 DG DG C . n C 2 3 DG 3 3 3 DG DG C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DA 5 5 5 DA DA C . n C 2 6 DT 6 6 6 DT DT C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DC 8 8 8 DC DC C . n C 2 9 DC 9 9 9 DC DC C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DA 11 11 11 DA DA C . n C 2 12 DA 12 12 12 DA DA C . n C 2 13 DG 13 13 13 DG DG C . n C 2 14 DC 14 14 14 DC DC C . n C 2 15 DT 15 15 15 DT DT C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DC 17 17 17 DC DC C . n C 2 18 DA 18 18 18 DA DA C . n C 2 19 DT 19 19 19 DT DT C . n C 2 20 DC 20 20 20 DC DC C . n C 2 21 DG 21 21 21 DG DG C . n C 2 22 DA 22 22 22 DA DA C . n C 2 23 DT 23 23 23 DT DT C . n C 2 24 DG 24 24 24 DG DG C . n D 3 1 DC 1 1 1 DC DC D . n D 3 2 DA 2 2 2 DA DA D . n D 3 3 DT 3 3 3 DT DT D . n D 3 4 DC 4 4 4 DC DC D . n D 3 5 DG 5 5 5 DG DG D . n D 3 6 DA 6 6 6 DA DA D . n D 3 7 DT 7 7 7 DT DT D . n D 3 8 DG 8 8 8 DG DG D . n D 3 9 DG 9 9 9 DG DG D . n D 3 10 DA 10 10 10 DA DA D . n D 3 11 DG 11 11 11 DG DG D . n D 3 12 DC 12 12 12 DC DC D . n D 3 13 DT 13 13 13 DT DT D . n D 3 14 DT 14 14 14 DT DT D . n D 3 15 DA 15 15 15 DA DA D . n D 3 16 DG 16 16 16 DG DG D . n D 3 17 DG 17 17 17 DG DG D . n D 3 18 DG 18 18 18 DG DG D . n D 3 19 DA 19 19 19 DA DA D . n D 3 20 DT 20 20 20 DT DT D . n D 3 21 DC 21 21 21 DC DC D . n D 3 22 DC 22 22 22 DC DC D . n D 3 23 DC 23 23 23 DC DC D . n D 3 24 DC 24 24 24 DC DC D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 NCO 1 1129 1129 NCO NCO B . F 5 HOH 1 2001 2001 HOH HOH A . F 5 HOH 2 2002 2002 HOH HOH A . F 5 HOH 3 2003 2003 HOH HOH A . G 5 HOH 1 2001 2001 HOH HOH B . G 5 HOH 2 2002 2002 HOH HOH B . H 5 HOH 1 2001 2001 HOH HOH D . H 5 HOH 2 2002 2002 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14050 ? 1 MORE -91.5 ? 1 'SSA (A^2)' 37640 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 9_555 -x,-x+y,-z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-26 2 'Structure model' 1 1 2015-10-28 3 'Structure model' 1 2 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' 'Non-polymer description' 3 2 'Structure model' Other 4 2 'Structure model' 'Refinement description' 5 2 'Structure model' 'Source and taxonomy' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' 'Data collection' 8 3 'Structure model' 'Database references' 9 3 'Structure model' 'Derived calculations' 10 3 'Structure model' Other 11 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 35.9438 -49.3735 23.2142 0.4389 0.3972 0.4452 0.0823 0.0055 0.0889 2.6911 6.6008 3.4158 2.4956 2.1782 -0.8147 -0.1319 -0.0379 -1.1185 -0.1038 0.3731 -1.9061 0.5838 0.5057 0.1614 'X-RAY DIFFRACTION' 2 ? refined 25.6740 -46.7973 7.6064 1.0277 2.2510 0.3844 -0.5053 0.0117 0.5242 3.2998 1.7921 -0.0016 2.4317 0.0426 0.0369 -0.6186 0.1238 -1.6434 -0.6923 0.4563 -0.8280 0.1243 -1.8897 0.0339 'X-RAY DIFFRACTION' 3 ? refined 30.4846 -39.5397 20.7126 0.2891 0.4883 0.2413 -0.0343 -0.0414 0.0362 2.8012 2.9286 3.4283 -1.4831 2.0600 0.3026 0.3921 1.0592 -0.1796 0.4690 0.2281 -0.0469 -0.2005 -0.4513 -0.0006 'X-RAY DIFFRACTION' 4 ? refined 19.5213 -41.5339 17.2040 -0.0426 0.6572 0.2184 -0.1871 -0.0545 -0.0576 6.5048 3.6649 8.7325 1.4522 -6.6947 0.9240 -0.3779 1.3812 0.7427 -0.3995 1.3724 0.0729 -0.7314 -1.6224 0.6921 'X-RAY DIFFRACTION' 5 ? refined 31.2837 -33.7397 26.8249 0.2954 0.3255 0.1640 -0.0987 -0.0749 0.0683 5.3416 5.2754 4.9353 -3.3639 -1.4021 1.0445 -0.4694 -0.8988 0.2841 0.6316 0.0425 -0.7065 -0.4864 -0.2010 -0.0013 'X-RAY DIFFRACTION' 6 ? refined 24.7417 -60.5373 2.6556 1.1610 0.9238 1.2271 0.3389 0.4447 0.4560 0.1280 0.3521 0.1758 0.0680 0.1244 -0.0848 -1.1857 -1.1210 2.5195 -1.0989 0.0680 1.1592 -0.3501 2.2247 -0.0063 'X-RAY DIFFRACTION' 7 ? refined 16.0690 -55.3647 8.2012 0.2260 0.3606 0.4597 -0.0104 0.1378 0.3751 6.6910 7.0186 2.0141 5.9642 7.5649 8.9168 -0.6047 -0.1690 1.9224 -1.5620 -1.5781 0.0990 -0.5235 -0.3735 -0.7215 'X-RAY DIFFRACTION' 8 ? refined 25.3564 -57.1384 17.4736 0.1848 0.4414 0.4248 0.0561 -0.1057 0.1009 2.5989 3.1286 3.2049 0.7787 0.7876 2.6836 -0.2344 -1.1006 -0.1313 1.0630 0.4653 -0.7586 0.6331 0.4493 -0.0628 'X-RAY DIFFRACTION' 9 ? refined 22.0967 -68.5905 17.0954 0.4133 0.5971 0.3840 -0.1171 0.1883 0.2247 4.8292 4.1274 3.3344 1.1420 1.1952 0.2363 -0.5636 0.0057 -0.9486 -1.1538 0.6312 -1.3756 0.0713 0.5196 0.0329 'X-RAY DIFFRACTION' 10 ? refined 15.9591 -68.3361 18.2757 0.2140 0.2868 0.4091 -0.1554 -0.0621 0.0944 2.8310 6.6158 3.8081 2.8748 0.4131 0.1033 -0.4240 -0.0716 -0.0961 -0.1676 0.2594 0.6554 0.2662 -0.7078 0.0002 'X-RAY DIFFRACTION' 11 ? refined 63.8287 -41.7247 12.1221 0.5757 1.0179 1.4038 0.0123 -0.0419 0.2261 0.5419 0.2335 0.7450 -0.2518 -0.2040 0.2999 -3.1005 3.1677 1.7607 0.0323 1.5732 0.6474 0.0319 0.4967 -0.0076 'X-RAY DIFFRACTION' 12 ? refined 51.5560 -53.5308 7.5134 0.4488 1.2670 0.9581 -0.0474 0.0310 -0.2036 1.4994 0.3790 1.2046 0.2879 0.4328 -0.5859 -0.8176 -0.2236 -0.4480 0.0421 0.6476 -0.6788 0.3670 -1.0549 0.0012 'X-RAY DIFFRACTION' 13 ? refined 37.5836 -68.4049 13.2173 0.8031 1.0037 1.4002 -0.1807 -0.1458 0.1251 0.2252 0.1027 0.8559 0.1312 -0.2322 -0.2899 -0.9947 -1.4784 1.7857 0.6861 -0.0424 -1.0614 0.1752 0.0127 -0.0093 'X-RAY DIFFRACTION' 14 ? refined 32.9371 -85.0378 8.4008 1.1615 0.8004 2.2982 -0.0294 0.5310 -0.0290 0.1933 0.2534 0.6419 0.0926 0.3543 0.2694 -0.1771 -0.7405 -1.6260 -0.3656 0.1758 0.8141 0.5536 0.8804 0.0068 'X-RAY DIFFRACTION' 15 ? refined 26.5623 -95.7055 20.3491 1.3600 1.1018 2.7661 -0.0775 0.3474 0.3731 0.0754 0.2071 0.2068 0.0531 0.0718 0.2104 -1.3161 -0.5813 -0.9972 0.7510 0.0129 2.0766 0.7486 0.7004 -0.0016 'X-RAY DIFFRACTION' 16 ? refined 71.1407 -67.6642 -12.1943 1.1747 1.4312 1.4304 0.0847 0.0809 0.0605 0.5188 0.2330 0.0630 -0.3103 -0.1308 0.1148 -1.1638 -0.8837 1.4001 3.2625 0.8091 -1.4334 0.0015 0.1565 0.0081 'X-RAY DIFFRACTION' 17 ? refined 57.0762 -69.0205 -17.1838 0.8558 1.1190 2.2226 -0.2344 0.3165 0.0597 0.1473 0.2079 0.6796 0.0415 0.1063 -0.3040 -1.4712 -1.1595 -1.4274 -0.3908 -0.2538 0.6659 0.7180 -1.0826 0.0025 'X-RAY DIFFRACTION' 18 ? refined 45.6212 -71.7495 -6.3370 0.4897 1.1363 1.4157 -0.0329 0.2405 0.0263 0.3661 0.4778 0.2495 0.3734 -0.1444 0.0241 -1.6214 2.3883 -1.1839 0.3516 0.9296 1.5358 1.6529 0.5517 0.0029 'X-RAY DIFFRACTION' 19 ? refined 41.9879 -58.1242 10.2492 0.7364 1.1574 1.6137 -0.3319 0.1026 -0.3085 0.2181 0.3672 0.2185 0.1411 0.1859 -0.0780 0.1728 -2.1689 1.0386 0.1609 0.1671 0.9131 -0.9477 1.3815 -0.0029 'X-RAY DIFFRACTION' 20 ? refined 59.2648 -48.5678 8.1722 0.8409 1.2307 0.7348 -0.2253 0.0604 -0.0095 2.0434 1.7686 2.3947 0.2187 1.8577 1.3536 0.3723 -0.5097 0.5225 0.6017 -1.5642 0.5049 -2.4143 -0.6210 0.0011 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 3:27)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 28:35)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 36:67)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 68:79)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(CHAIN A AND RESID 80:127)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 4:10)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 11:18)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 19:44)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 45:68)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '(CHAIN B AND RESID 69:128)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '(CHAIN C AND RESID 1:4)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '(CHAIN C AND RESID 5:10)' 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? '(CHAIN C AND RESID 11:15)' 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? '(CHAIN C AND RESID 16:20)' 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? '(CHAIN C AND RESID 21:24)' 'X-RAY DIFFRACTION' 16 16 ? ? ? ? ? ? ? ? ? '(CHAIN D AND RESID 1:4)' 'X-RAY DIFFRACTION' 17 17 ? ? ? ? ? ? ? ? ? '(CHAIN D AND RESID 5:8)' 'X-RAY DIFFRACTION' 18 18 ? ? ? ? ? ? ? ? ? '(CHAIN D AND RESID 9:12)' 'X-RAY DIFFRACTION' 19 19 ? ? ? ? ? ? ? ? ? '(CHAIN D AND RESID 13:17)' 'X-RAY DIFFRACTION' 20 20 ? ? ? ? ? ? ? ? ? '(CHAIN D AND RESID 18:24)' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 2WJ0 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;INSERTED RESIDUES GTMG AT THE N-TERMINUS ARE A RESULT OF CLONING PROCEDURE ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C B LEU 87 ? ? N B PRO 88 ? ? CA B PRO 88 ? ? 128.61 119.30 9.31 1.50 Y 2 1 "O4'" C DT 6 ? ? "C1'" C DT 6 ? ? N1 C DT 6 ? ? 103.70 108.00 -4.30 0.70 N 3 1 "O4'" C DA 12 ? ? "C1'" C DA 12 ? ? N9 C DA 12 ? ? 110.35 108.30 2.05 0.30 N 4 1 "C3'" C DA 18 ? ? "C2'" C DA 18 ? ? "C1'" C DA 18 ? ? 97.39 102.40 -5.01 0.80 N 5 1 "C3'" C DG 24 ? ? "C2'" C DG 24 ? ? "C1'" C DG 24 ? ? 96.74 102.40 -5.66 0.80 N 6 1 "O4'" C DG 24 ? ? "C1'" C DG 24 ? ? N9 C DG 24 ? ? 110.95 108.30 2.65 0.30 N 7 1 "O4'" D DG 8 ? ? "C1'" D DG 8 ? ? N9 D DG 8 ? ? 110.92 108.30 2.62 0.30 N 8 1 "O4'" D DC 12 ? ? "C1'" D DC 12 ? ? N1 D DC 12 ? ? 112.19 108.30 3.89 0.30 N 9 1 C5 D DT 20 ? ? C4 D DT 20 ? ? O4 D DT 20 ? ? 120.47 124.90 -4.43 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 31 ? ? -69.82 88.69 2 1 PRO A 88 ? ? -23.01 -75.56 3 1 THR A 103 ? ? -86.93 -159.10 4 1 ASN A 106 ? ? -162.14 -164.79 5 1 ASP A 110 ? ? -116.87 -162.40 6 1 LEU A 116 ? ? -84.36 31.01 7 1 SER B 32 ? ? -39.32 138.64 8 1 PRO B 33 ? ? -38.42 79.94 9 1 PRO B 35 ? ? -45.08 91.51 10 1 ASN B 43 ? ? -143.98 46.35 11 1 ARG B 45 ? ? -120.64 -58.44 12 1 PRO B 88 ? ? -31.11 -28.60 13 1 TRP B 92 ? ? -42.22 153.49 14 1 THR B 103 ? ? -134.25 -100.86 15 1 GLU B 104 ? ? -128.89 -101.76 16 1 LYS B 105 ? ? -59.37 -9.01 17 1 ASP B 110 ? ? -125.82 -160.30 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A THR -1 ? A THR 2 3 1 Y 1 A MET 0 ? A MET 3 4 1 Y 1 A GLY 1 ? A GLY 4 5 1 Y 1 A LYS 2 ? A LYS 5 6 1 Y 1 A PHE 128 ? A PHE 131 7 1 Y 1 A GLN 129 ? A GLN 132 8 1 Y 1 A GLU 130 ? A GLU 133 9 1 Y 1 A ARG 131 ? A ARG 134 10 1 Y 1 A PHE 132 ? A PHE 135 11 1 Y 1 A GLY 133 ? A GLY 136 12 1 Y 1 A GLU 134 ? A GLU 137 13 1 Y 1 A LYS 135 ? A LYS 138 14 1 Y 1 A VAL 136 ? A VAL 139 15 1 Y 1 B GLY -2 ? B GLY 1 16 1 Y 1 B THR -1 ? B THR 2 17 1 Y 1 B MET 0 ? B MET 3 18 1 Y 1 B GLY 1 ? B GLY 4 19 1 Y 1 B LYS 2 ? B LYS 5 20 1 Y 1 B SER 3 ? B SER 6 21 1 Y 1 B GLN 129 ? B GLN 132 22 1 Y 1 B GLU 130 ? B GLU 133 23 1 Y 1 B ARG 131 ? B ARG 134 24 1 Y 1 B PHE 132 ? B PHE 135 25 1 Y 1 B GLY 133 ? B GLY 136 26 1 Y 1 B GLU 134 ? B GLU 137 27 1 Y 1 B LYS 135 ? B LYS 138 28 1 Y 1 B VAL 136 ? B VAL 139 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 NCO CO CO N N 372 NCO N1 N N N 373 NCO N2 N N N 374 NCO N3 N N N 375 NCO N4 N N N 376 NCO N5 N N N 377 NCO N6 N N N 378 NCO HN11 H N N 379 NCO HN12 H N N 380 NCO HN13 H N N 381 NCO HN21 H N N 382 NCO HN22 H N N 383 NCO HN23 H N N 384 NCO HN31 H N N 385 NCO HN32 H N N 386 NCO HN33 H N N 387 NCO HN41 H N N 388 NCO HN42 H N N 389 NCO HN43 H N N 390 NCO HN51 H N N 391 NCO HN52 H N N 392 NCO HN53 H N N 393 NCO HN61 H N N 394 NCO HN62 H N N 395 NCO HN63 H N N 396 PHE N N N N 397 PHE CA C N S 398 PHE C C N N 399 PHE O O N N 400 PHE CB C N N 401 PHE CG C Y N 402 PHE CD1 C Y N 403 PHE CD2 C Y N 404 PHE CE1 C Y N 405 PHE CE2 C Y N 406 PHE CZ C Y N 407 PHE OXT O N N 408 PHE H H N N 409 PHE H2 H N N 410 PHE HA H N N 411 PHE HB2 H N N 412 PHE HB3 H N N 413 PHE HD1 H N N 414 PHE HD2 H N N 415 PHE HE1 H N N 416 PHE HE2 H N N 417 PHE HZ H N N 418 PHE HXT H N N 419 PRO N N N N 420 PRO CA C N S 421 PRO C C N N 422 PRO O O N N 423 PRO CB C N N 424 PRO CG C N N 425 PRO CD C N N 426 PRO OXT O N N 427 PRO H H N N 428 PRO HA H N N 429 PRO HB2 H N N 430 PRO HB3 H N N 431 PRO HG2 H N N 432 PRO HG3 H N N 433 PRO HD2 H N N 434 PRO HD3 H N N 435 PRO HXT H N N 436 SER N N N N 437 SER CA C N S 438 SER C C N N 439 SER O O N N 440 SER CB C N N 441 SER OG O N N 442 SER OXT O N N 443 SER H H N N 444 SER H2 H N N 445 SER HA H N N 446 SER HB2 H N N 447 SER HB3 H N N 448 SER HG H N N 449 SER HXT H N N 450 THR N N N N 451 THR CA C N S 452 THR C C N N 453 THR O O N N 454 THR CB C N R 455 THR OG1 O N N 456 THR CG2 C N N 457 THR OXT O N N 458 THR H H N N 459 THR H2 H N N 460 THR HA H N N 461 THR HB H N N 462 THR HG1 H N N 463 THR HG21 H N N 464 THR HG22 H N N 465 THR HG23 H N N 466 THR HXT H N N 467 TRP N N N N 468 TRP CA C N S 469 TRP C C N N 470 TRP O O N N 471 TRP CB C N N 472 TRP CG C Y N 473 TRP CD1 C Y N 474 TRP CD2 C Y N 475 TRP NE1 N Y N 476 TRP CE2 C Y N 477 TRP CE3 C Y N 478 TRP CZ2 C Y N 479 TRP CZ3 C Y N 480 TRP CH2 C Y N 481 TRP OXT O N N 482 TRP H H N N 483 TRP H2 H N N 484 TRP HA H N N 485 TRP HB2 H N N 486 TRP HB3 H N N 487 TRP HD1 H N N 488 TRP HE1 H N N 489 TRP HE3 H N N 490 TRP HZ2 H N N 491 TRP HZ3 H N N 492 TRP HH2 H N N 493 TRP HXT H N N 494 TYR N N N N 495 TYR CA C N S 496 TYR C C N N 497 TYR O O N N 498 TYR CB C N N 499 TYR CG C Y N 500 TYR CD1 C Y N 501 TYR CD2 C Y N 502 TYR CE1 C Y N 503 TYR CE2 C Y N 504 TYR CZ C Y N 505 TYR OH O N N 506 TYR OXT O N N 507 TYR H H N N 508 TYR H2 H N N 509 TYR HA H N N 510 TYR HB2 H N N 511 TYR HB3 H N N 512 TYR HD1 H N N 513 TYR HD2 H N N 514 TYR HE1 H N N 515 TYR HE2 H N N 516 TYR HH H N N 517 TYR HXT H N N 518 VAL N N N N 519 VAL CA C N S 520 VAL C C N N 521 VAL O O N N 522 VAL CB C N N 523 VAL CG1 C N N 524 VAL CG2 C N N 525 VAL OXT O N N 526 VAL H H N N 527 VAL H2 H N N 528 VAL HA H N N 529 VAL HB H N N 530 VAL HG11 H N N 531 VAL HG12 H N N 532 VAL HG13 H N N 533 VAL HG21 H N N 534 VAL HG22 H N N 535 VAL HG23 H N N 536 VAL HXT H N N 537 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 NCO CO N1 sing N N 365 NCO CO N2 sing N N 366 NCO CO N3 sing N N 367 NCO CO N4 sing N N 368 NCO CO N5 sing N N 369 NCO CO N6 sing N N 370 NCO N1 HN11 sing N N 371 NCO N1 HN12 sing N N 372 NCO N1 HN13 sing N N 373 NCO N2 HN21 sing N N 374 NCO N2 HN22 sing N N 375 NCO N2 HN23 sing N N 376 NCO N3 HN31 sing N N 377 NCO N3 HN32 sing N N 378 NCO N3 HN33 sing N N 379 NCO N4 HN41 sing N N 380 NCO N4 HN42 sing N N 381 NCO N4 HN43 sing N N 382 NCO N5 HN51 sing N N 383 NCO N5 HN52 sing N N 384 NCO N5 HN53 sing N N 385 NCO N6 HN61 sing N N 386 NCO N6 HN62 sing N N 387 NCO N6 HN63 sing N N 388 PHE N CA sing N N 389 PHE N H sing N N 390 PHE N H2 sing N N 391 PHE CA C sing N N 392 PHE CA CB sing N N 393 PHE CA HA sing N N 394 PHE C O doub N N 395 PHE C OXT sing N N 396 PHE CB CG sing N N 397 PHE CB HB2 sing N N 398 PHE CB HB3 sing N N 399 PHE CG CD1 doub Y N 400 PHE CG CD2 sing Y N 401 PHE CD1 CE1 sing Y N 402 PHE CD1 HD1 sing N N 403 PHE CD2 CE2 doub Y N 404 PHE CD2 HD2 sing N N 405 PHE CE1 CZ doub Y N 406 PHE CE1 HE1 sing N N 407 PHE CE2 CZ sing Y N 408 PHE CE2 HE2 sing N N 409 PHE CZ HZ sing N N 410 PHE OXT HXT sing N N 411 PRO N CA sing N N 412 PRO N CD sing N N 413 PRO N H sing N N 414 PRO CA C sing N N 415 PRO CA CB sing N N 416 PRO CA HA sing N N 417 PRO C O doub N N 418 PRO C OXT sing N N 419 PRO CB CG sing N N 420 PRO CB HB2 sing N N 421 PRO CB HB3 sing N N 422 PRO CG CD sing N N 423 PRO CG HG2 sing N N 424 PRO CG HG3 sing N N 425 PRO CD HD2 sing N N 426 PRO CD HD3 sing N N 427 PRO OXT HXT sing N N 428 SER N CA sing N N 429 SER N H sing N N 430 SER N H2 sing N N 431 SER CA C sing N N 432 SER CA CB sing N N 433 SER CA HA sing N N 434 SER C O doub N N 435 SER C OXT sing N N 436 SER CB OG sing N N 437 SER CB HB2 sing N N 438 SER CB HB3 sing N N 439 SER OG HG sing N N 440 SER OXT HXT sing N N 441 THR N CA sing N N 442 THR N H sing N N 443 THR N H2 sing N N 444 THR CA C sing N N 445 THR CA CB sing N N 446 THR CA HA sing N N 447 THR C O doub N N 448 THR C OXT sing N N 449 THR CB OG1 sing N N 450 THR CB CG2 sing N N 451 THR CB HB sing N N 452 THR OG1 HG1 sing N N 453 THR CG2 HG21 sing N N 454 THR CG2 HG22 sing N N 455 THR CG2 HG23 sing N N 456 THR OXT HXT sing N N 457 TRP N CA sing N N 458 TRP N H sing N N 459 TRP N H2 sing N N 460 TRP CA C sing N N 461 TRP CA CB sing N N 462 TRP CA HA sing N N 463 TRP C O doub N N 464 TRP C OXT sing N N 465 TRP CB CG sing N N 466 TRP CB HB2 sing N N 467 TRP CB HB3 sing N N 468 TRP CG CD1 doub Y N 469 TRP CG CD2 sing Y N 470 TRP CD1 NE1 sing Y N 471 TRP CD1 HD1 sing N N 472 TRP CD2 CE2 doub Y N 473 TRP CD2 CE3 sing Y N 474 TRP NE1 CE2 sing Y N 475 TRP NE1 HE1 sing N N 476 TRP CE2 CZ2 sing Y N 477 TRP CE3 CZ3 doub Y N 478 TRP CE3 HE3 sing N N 479 TRP CZ2 CH2 doub Y N 480 TRP CZ2 HZ2 sing N N 481 TRP CZ3 CH2 sing Y N 482 TRP CZ3 HZ3 sing N N 483 TRP CH2 HH2 sing N N 484 TRP OXT HXT sing N N 485 TYR N CA sing N N 486 TYR N H sing N N 487 TYR N H2 sing N N 488 TYR CA C sing N N 489 TYR CA CB sing N N 490 TYR CA HA sing N N 491 TYR C O doub N N 492 TYR C OXT sing N N 493 TYR CB CG sing N N 494 TYR CB HB2 sing N N 495 TYR CB HB3 sing N N 496 TYR CG CD1 doub Y N 497 TYR CG CD2 sing Y N 498 TYR CD1 CE1 sing Y N 499 TYR CD1 HD1 sing N N 500 TYR CD2 CE2 doub Y N 501 TYR CD2 HD2 sing N N 502 TYR CE1 CZ doub Y N 503 TYR CE1 HE1 sing N N 504 TYR CE2 CZ sing Y N 505 TYR CE2 HE2 sing N N 506 TYR CZ OH sing N N 507 TYR OH HH sing N N 508 TYR OXT HXT sing N N 509 VAL N CA sing N N 510 VAL N H sing N N 511 VAL N H2 sing N N 512 VAL CA C sing N N 513 VAL CA CB sing N N 514 VAL CA HA sing N N 515 VAL C O doub N N 516 VAL C OXT sing N N 517 VAL CB CG1 sing N N 518 VAL CB CG2 sing N N 519 VAL CB HB sing N N 520 VAL CG1 HG11 sing N N 521 VAL CG1 HG12 sing N N 522 VAL CG1 HG13 sing N N 523 VAL CG2 HG21 sing N N 524 VAL CG2 HG22 sing N N 525 VAL CG2 HG23 sing N N 526 VAL OXT HXT sing N N 527 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2WJ0 'double helix' 2WJ0 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 24 1_555 -0.177 0.002 -0.253 -28.177 -9.869 -1.069 1 C_DG1:DC24_D C 1 ? D 24 ? 19 1 1 C DG 2 1_555 D DC 23 1_555 -0.152 -0.077 -0.117 -7.251 -7.767 -0.950 2 C_DG2:DC23_D C 2 ? D 23 ? 19 1 1 C DG 3 1_555 D DC 22 1_555 -0.085 -0.058 -0.021 7.804 -8.017 1.081 3 C_DG3:DC22_D C 3 ? D 22 ? 19 1 1 C DG 4 1_555 D DC 21 1_555 -0.150 -0.235 -0.925 -1.222 -12.595 4.925 4 C_DG4:DC21_D C 4 ? D 21 ? 19 1 1 C DA 5 1_555 D DT 20 1_555 0.062 -0.166 -0.273 1.105 -17.826 -3.506 5 C_DA5:DT20_D C 5 ? D 20 ? 20 1 1 C DT 6 1_555 D DA 19 1_555 -0.108 -0.124 0.408 -10.134 -6.894 -4.843 6 C_DT6:DA19_D C 6 ? D 19 ? 20 1 1 C DC 7 1_555 D DG 18 1_555 0.038 -0.150 0.706 -9.814 -14.165 -3.836 7 C_DC7:DG18_D C 7 ? D 18 ? 19 1 1 C DC 8 1_555 D DG 17 1_555 0.121 -0.109 -0.113 -9.994 -10.486 -0.528 8 C_DC8:DG17_D C 8 ? D 17 ? 19 1 1 C DC 9 1_555 D DG 16 1_555 0.098 -0.052 0.314 -17.971 -8.543 -0.669 9 C_DC9:DG16_D C 9 ? D 16 ? 19 1 1 C DT 10 1_555 D DA 15 1_555 -0.069 -0.162 0.299 -6.512 -2.462 0.259 10 C_DT10:DA15_D C 10 ? D 15 ? 20 1 1 C DA 11 1_555 D DT 14 1_555 0.063 -0.152 0.237 3.242 -6.085 -3.619 11 C_DA11:DT14_D C 11 ? D 14 ? 20 1 1 C DA 12 1_555 D DT 13 1_555 0.137 -0.148 0.228 6.859 -15.319 -2.910 12 C_DA12:DT13_D C 12 ? D 13 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 24 1_555 C DG 2 1_555 D DC 23 1_555 -1.005 0.864 2.729 -1.059 -4.431 41.059 1.617 1.332 2.650 -6.295 1.504 41.300 1 CC_DG1DG2:DC23DC24_DD C 1 ? D 24 ? C 2 ? D 23 ? 1 C DG 2 1_555 D DC 23 1_555 C DG 3 1_555 D DC 22 1_555 -0.021 0.378 3.058 0.255 -10.111 32.374 2.146 0.074 2.816 -17.607 -0.443 33.877 2 CC_DG2DG3:DC22DC23_DD C 2 ? D 23 ? C 3 ? D 22 ? 1 C DG 3 1_555 D DC 22 1_555 C DG 4 1_555 D DC 21 1_555 0.244 0.175 3.636 8.488 10.112 35.520 -1.202 0.858 3.521 15.913 -13.357 37.820 3 CC_DG3DG4:DC21DC22_DD C 3 ? D 22 ? C 4 ? D 21 ? 1 C DG 4 1_555 D DC 21 1_555 C DA 5 1_555 D DT 20 1_555 -0.991 0.975 3.181 -9.559 1.279 40.159 1.244 0.364 3.349 1.831 13.683 41.254 4 CC_DG4DA5:DT20DC21_DD C 4 ? D 21 ? C 5 ? D 20 ? 1 C DA 5 1_555 D DT 20 1_555 C DT 6 1_555 D DA 19 1_555 -0.311 -0.886 3.646 -6.363 -3.576 35.939 -0.851 -0.497 3.714 -5.723 10.183 36.648 5 CC_DA5DT6:DA19DT20_DD C 5 ? D 20 ? C 6 ? D 19 ? 1 C DT 6 1_555 D DA 19 1_555 C DC 7 1_555 D DG 18 1_555 -0.133 -0.700 3.399 -1.774 -8.698 32.623 0.301 -0.078 3.469 -15.138 3.088 33.778 6 CC_DT6DC7:DG18DA19_DD C 6 ? D 19 ? C 7 ? D 18 ? 1 C DC 7 1_555 D DG 18 1_555 C DC 8 1_555 D DG 17 1_555 0.046 1.327 3.529 6.681 -8.598 41.776 2.689 0.624 3.179 -11.818 -9.183 43.110 7 CC_DC7DC8:DG17DG18_DD C 7 ? D 18 ? C 8 ? D 17 ? 1 C DC 8 1_555 D DG 17 1_555 C DC 9 1_555 D DG 16 1_555 -0.470 1.506 3.773 -5.126 -2.426 35.968 2.798 -0.067 3.697 -3.898 8.237 36.398 8 CC_DC8DC9:DG16DG17_DD C 8 ? D 17 ? C 9 ? D 16 ? 1 C DC 9 1_555 D DG 16 1_555 C DT 10 1_555 D DA 15 1_555 0.223 0.728 3.166 -0.521 -1.768 39.778 1.266 -0.385 3.129 -2.597 0.766 39.819 9 CC_DC9DT10:DA15DG16_DD C 9 ? D 16 ? C 10 ? D 15 ? 1 C DT 10 1_555 D DA 15 1_555 C DA 11 1_555 D DT 14 1_555 0.108 0.242 3.282 -1.361 5.860 30.242 -0.699 -0.472 3.262 11.094 2.577 30.821 10 CC_DT10DA11:DT14DA15_DD C 10 ? D 15 ? C 11 ? D 14 ? 1 C DA 11 1_555 D DT 14 1_555 C DA 12 1_555 D DT 13 1_555 0.659 -0.864 3.178 -2.091 7.126 31.274 -2.758 -1.542 2.868 12.991 3.811 32.122 11 CC_DA11DA12:DT13DT14_DD C 11 ? D 14 ? C 12 ? D 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'COBALT HEXAMMINE(III)' NCO 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2WIZ _pdbx_initial_refinement_model.details 'PDB ENTRY 2WIZ' #