HEADER HYDROLASE 25-MAY-09 2WJD TITLE CRYSTAL STRUCTURE OF THE TYROSINE PHOSPHATASE CPS4B FROM STEPTOCOCCUS TITLE 2 PNEUMONIAE TIGR4. COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE CPSB; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CPS4B; COMPND 5 EC: 3.1.3.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 1313; SOURCE 4 STRAIN: TIGR 4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA KEYWDS CAPSULE BIOGENESIS/DEGRADATION, MANGANESE, HYDROLASE, PHOSPHATASE, KEYWDS 2 PROTEIN PHOSPHATASE, EXOPOLYSACCHARIDE SYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR G.HAGELUEKEN,H.HUANG,J.H.NAISMITH REVDAT 5 08-MAY-24 2WJD 1 REMARK LINK REVDAT 4 12-JUL-17 2WJD 1 REVDAT 3 15-SEP-09 2WJD 1 JRNL REMARK HETATM REVDAT 2 28-JUL-09 2WJD 1 JRNL REVDAT 1 14-JUL-09 2WJD 0 JRNL AUTH G.HAGELUEKEN,H.HUANG,I.L.MAINPRIZE,C.WHITFIELD,J.H.NAISMITH JRNL TITL CRYSTAL STRUCTURES OF WZB OF ESCHERICHIA COLI AND CPSB OF JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE, REPRESENTATIVES OF TWO FAMILIES OF JRNL TITL 3 TYROSINE PHOSPHATASES THAT REGULATE CAPSULE ASSEMBLY. JRNL REF J.MOL.BIOL. V. 392 678 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19616007 JRNL DOI 10.1016/J.JMB.2009.07.026 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.210 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 9507 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 458 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.0773 - 4.0346 1.00 3148 163 0.1592 0.1869 REMARK 3 2 4.0346 - 3.2037 0.99 2958 152 0.1601 0.2430 REMARK 3 3 3.2037 - 2.7991 1.00 2943 143 0.2062 0.3063 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 27.44 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 2.010 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06760 REMARK 3 B22 (A**2) : -0.06760 REMARK 3 B33 (A**2) : 0.13520 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2039 REMARK 3 ANGLE : 0.931 2751 REMARK 3 CHIRALITY : 0.065 300 REMARK 3 PLANARITY : 0.003 352 REMARK 3 DIHEDRAL : 16.605 769 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 4:138) REMARK 3 ORIGIN FOR THE GROUP (A): 71.5072 52.6384 36.7425 REMARK 3 T TENSOR REMARK 3 T11: 0.1609 T22: 0.1098 REMARK 3 T33: 0.1283 T12: 0.0190 REMARK 3 T13: 0.0002 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.9276 L22: 1.1535 REMARK 3 L33: 1.0355 L12: -0.1656 REMARK 3 L13: 0.0066 L23: 0.6387 REMARK 3 S TENSOR REMARK 3 S11: 0.0869 S12: 0.1031 S13: -0.0392 REMARK 3 S21: -0.1594 S22: -0.0195 S23: -0.0777 REMARK 3 S31: -0.2622 S32: -0.0524 S33: -0.0712 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 139:155) REMARK 3 ORIGIN FOR THE GROUP (A): 77.3529 36.6033 48.8224 REMARK 3 T TENSOR REMARK 3 T11: 0.2460 T22: 0.0118 REMARK 3 T33: 0.2152 T12: -0.0030 REMARK 3 T13: 0.0080 T23: 0.0403 REMARK 3 L TENSOR REMARK 3 L11: 2.2536 L22: -3.3044 REMARK 3 L33: 5.8943 L12: 1.1696 REMARK 3 L13: -1.5825 L23: -1.5491 REMARK 3 S TENSOR REMARK 3 S11: -0.1977 S12: -0.1093 S13: -0.5819 REMARK 3 S21: -0.1689 S22: -0.1265 S23: -0.1724 REMARK 3 S31: 0.5112 S32: 0.2239 S33: 0.3051 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 156:247) REMARK 3 ORIGIN FOR THE GROUP (A): 65.2232 39.0199 44.4483 REMARK 3 T TENSOR REMARK 3 T11: 0.1073 T22: 0.0554 REMARK 3 T33: 0.1230 T12: -0.0062 REMARK 3 T13: 0.0426 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.7698 L22: 0.3348 REMARK 3 L33: 0.6182 L12: -0.0148 REMARK 3 L13: -0.0047 L23: 0.3338 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: -0.0526 S13: -0.1786 REMARK 3 S21: 0.1167 S22: 0.0624 S23: 0.0146 REMARK 3 S31: 0.1761 S32: -0.0836 S33: 0.0569 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WJD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-MAY-09. REMARK 100 THE DEPOSITION ID IS D_1290039920. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9531 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 22.40 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 58.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.18000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 18.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M (NH4)2SO4, 0.1 M TRIS-CL PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 46.15500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.42500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.42500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.23250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.42500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.42500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.07750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.42500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.42500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 69.23250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.42500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.42500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 23.07750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 46.15500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -166.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.31000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2069 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 ALA A -2 REMARK 465 MET A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 13 -143.59 -146.49 REMARK 500 MET A 47 -24.49 -140.36 REMARK 500 ALA A 70 141.82 -178.30 REMARK 500 HIS A 136 77.83 28.52 REMARK 500 ASN A 202 -175.18 -174.21 REMARK 500 ILE A 231 -55.17 -132.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1250 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 5 NE2 REMARK 620 2 HIS A 7 NE2 118.3 REMARK 620 3 GLU A 80 OE2 101.2 84.0 REMARK 620 4 ASP A 199 OD1 84.2 91.2 174.0 REMARK 620 5 HOH A2072 O 131.4 108.1 97.1 81.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1253 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 14 OD2 REMARK 620 2 ASP A 14 OD1 54.4 REMARK 620 3 HIS A 42 NE2 102.7 129.5 REMARK 620 4 HIS A 201 NE2 95.0 112.6 113.9 REMARK 620 5 HOH A2073 O 151.8 100.0 84.5 107.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1249 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 GLU A 108 OE2 88.1 REMARK 620 3 HIS A 136 NE2 93.0 106.6 REMARK 620 4 HOH A2072 O 100.5 133.7 118.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1244 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1245 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1246 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1247 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A 1251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SM A 1252 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1253 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WJF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TYROSINE PHOSPHATASE CPS4B FROM REMARK 900 STEPTOCOCCUS PNEUMONIAE TIGR4 IN COMPLEX WITH PHOSPHATE. REMARK 900 RELATED ID: 2WJE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TYROSINE PHOSPHATASE CPS4B FROM REMARK 900 STEPTOCOCCUS PNEUMONIAE TIGR4. DBREF 2WJD A -3 0 PDB 2WJD 2WJD -3 0 DBREF 2WJD A 1 243 UNP Q9AHD4 CPSB1_STRPN 1 243 SEQRES 1 A 247 GLY ALA MET GLY MET ILE ASP ILE HIS SER HIS ILE VAL SEQRES 2 A 247 PHE ASP VAL ASP ASP GLY PRO LYS SER ARG GLU GLU SER SEQRES 3 A 247 LYS ALA LEU LEU ALA GLU SER TYR ARG GLN GLY VAL ARG SEQRES 4 A 247 THR ILE VAL SER THR SER HIS ARG ARG LYS GLY MET PHE SEQRES 5 A 247 GLU THR PRO GLU GLU LYS ILE ALA GLU ASN PHE LEU GLN SEQRES 6 A 247 VAL ARG GLU ILE ALA LYS GLU VAL ALA SER ASP LEU VAL SEQRES 7 A 247 ILE ALA TYR GLY ALA GLU ILE TYR TYR THR PRO ASP VAL SEQRES 8 A 247 LEU ASP LYS LEU GLU LYS LYS ARG ILE PRO THR LEU ASN SEQRES 9 A 247 ASP SER ARG TYR ALA LEU ILE GLU PHE SER MET ASN THR SEQRES 10 A 247 PRO TYR ARG ASP ILE HIS SER ALA LEU SER LYS ILE LEU SEQRES 11 A 247 MET LEU GLY ILE THR PRO VAL ILE ALA HIS ILE GLU ARG SEQRES 12 A 247 TYR ASP ALA LEU GLU ASN ASN GLU LYS ARG VAL ARG GLU SEQRES 13 A 247 LEU ILE ASP MET GLY CYS TYR THR GLN VAL ASN SER SER SEQRES 14 A 247 HIS VAL LEU LYS PRO LYS LEU PHE GLY GLU ARG TYR LYS SEQRES 15 A 247 PHE MET LYS LYS ARG ALA GLN TYR PHE LEU GLU GLN ASP SEQRES 16 A 247 LEU VAL HIS VAL ILE ALA SER ASP MET HIS ASN LEU ASP SEQRES 17 A 247 GLY ARG PRO PRO HIS MET ALA GLU ALA TYR ASP LEU VAL SEQRES 18 A 247 THR GLN LYS TYR GLY GLU ALA LYS ALA GLN GLU LEU PHE SEQRES 19 A 247 ILE ASP ASN PRO ARG LYS ILE VAL MET ASP GLN LEU ILE HET SO4 A1244 5 HET SO4 A1245 5 HET SO4 A1246 5 HET SO4 A1247 5 HET SO4 A1248 5 HET MN A1249 1 HET MN A1250 1 HET SM A1251 1 HET SM A1252 1 HET MN A1253 1 HETNAM SO4 SULFATE ION HETNAM MN MANGANESE (II) ION HETNAM SM SAMARIUM (III) ION FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 MN 3(MN 2+) FORMUL 9 SM 2(SM 3+) FORMUL 12 HOH *73(H2 O) HELIX 1 1 SER A 18 GLN A 32 1 15 HELIX 2 2 PRO A 51 ALA A 70 1 20 HELIX 3 3 ASP A 86 LYS A 93 1 8 HELIX 4 4 THR A 98 SER A 102 5 5 HELIX 5 5 PRO A 114 MET A 127 1 14 HELIX 6 6 HIS A 136 TYR A 140 5 5 HELIX 7 7 TYR A 140 GLU A 144 5 5 HELIX 8 8 ASN A 146 GLY A 157 1 12 HELIX 9 9 SER A 165 VAL A 167 5 3 HELIX 10 10 TYR A 177 GLN A 190 1 14 HELIX 11 11 HIS A 209 GLY A 222 1 14 HELIX 12 12 GLY A 222 ILE A 231 1 10 HELIX 13 13 ILE A 231 MET A 239 1 9 SHEET 1 AA 3 MET A 1 ASP A 3 0 SHEET 2 AA 3 VAL A 34 VAL A 38 1 N ARG A 35 O MET A 1 SHEET 3 AA 3 VAL A 74 ALA A 76 1 O VAL A 74 N ILE A 37 SHEET 1 AB 6 HIS A 42 ARG A 43 0 SHEET 2 AB 6 GLU A 80 TYR A 82 1 O GLU A 80 N ARG A 43 SHEET 3 AB 6 TYR A 104 GLU A 108 1 O LEU A 106 N ILE A 81 SHEET 4 AB 6 THR A 131 ILE A 134 1 O THR A 131 N ALA A 105 SHEET 5 AB 6 TYR A 159 ASN A 163 1 O TYR A 159 N ILE A 134 SHEET 6 AB 6 VAL A 195 ALA A 197 1 O VAL A 195 N VAL A 162 LINK NE2 HIS A 5 MN MN A1250 1555 1555 2.07 LINK NE2 HIS A 7 MN MN A1250 1555 1555 2.15 LINK OD2 ASP A 14 MN MN A1253 1555 1555 2.31 LINK OD1 ASP A 14 MN MN A1253 1555 1555 2.48 LINK NE2 HIS A 42 MN MN A1253 1555 1555 2.28 LINK OE1 GLU A 80 MN MN A1249 1555 1555 2.40 LINK OE2 GLU A 80 MN MN A1250 1555 1555 2.19 LINK OE2 GLU A 108 MN MN A1249 1555 1555 2.30 LINK NE2 HIS A 136 MN MN A1249 1555 1555 2.38 LINK OE1 GLU A 147 SM SM A1251 1555 1555 2.64 LINK OD1 ASP A 199 MN MN A1250 1555 1555 2.28 LINK NE2 HIS A 201 MN MN A1253 1555 1555 2.19 LINK MN MN A1249 O HOH A2072 1555 1555 2.32 LINK MN MN A1250 O HOH A2072 1555 1555 2.07 LINK MN MN A1253 O HOH A2073 1555 1555 2.17 SITE 1 AC1 5 ARG A 63 ARG A 103 LYS A 178 GLN A 241 SITE 2 AC1 5 LEU A 242 SITE 1 AC2 2 TYR A 115 ARG A 149 SITE 1 AC3 1 ARG A 149 SITE 1 AC4 6 ARG A 44 SER A 110 MET A 111 SER A 123 SITE 2 AC4 6 ARG A 139 HOH A2038 SITE 1 AC5 4 SER A 18 ARG A 19 GLU A 20 HOH A2071 SITE 1 AC6 6 GLU A 80 GLU A 108 HIS A 136 MN A1250 SITE 2 AC6 6 HOH A2036 HOH A2072 SITE 1 AC7 6 HIS A 5 HIS A 7 GLU A 80 ASP A 199 SITE 2 AC7 6 MN A1249 HOH A2072 SITE 1 AC8 2 GLU A 147 GLN A 190 SITE 1 AC9 2 ASP A 191 LYS A 225 SITE 1 BC1 5 ASP A 14 HIS A 42 HIS A 201 ARG A 206 SITE 2 BC1 5 HOH A2073 CRYST1 88.850 88.850 92.310 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011255 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011255 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010833 0.00000