HEADER SUGAR BINDING PROTEIN 14-JUN-09 2WKK TITLE IDENTIFICATION OF THE GLYCAN TARGET OF THE NEMATOTOXIC FUNGAL GALECTIN TITLE 2 CGL2 IN CAENORHABDITIS ELEGANS CAVEAT 2WKK FUC H 1 HAS WRONG CHIRALITY AT ATOM C3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALECTIN-2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GALECTIN CGL2, GALECTIN II , CGL-II; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COPRINOPSIS CINEREA; SOURCE 3 ORGANISM_TAXID: 5346; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SUGAR-BINDING PROTEIN, LECTIN, GALECTIN, SECRETED, CELL WALL, SUGAR KEYWDS 2 BINDING, SUGAR BINDING PROTEIN, BETA-GALACTOSIDE BINDING LECTIN, KEYWDS 3 FRUITING BODY, EXTRACELLULAR MATRIX EXPDTA X-RAY DIFFRACTION AUTHOR A.BUTSCHI,A.TITZ,M.WAELTI,V.OLIERIC,K.PASCHINGER,G.XIAOQIANG, AUTHOR 2 P.H.SEEBERGER,I.B.H.WILSON,M.AEBI,M.O.HENGARTNER,M.KUENZLER REVDAT 6 13-DEC-23 2WKK 1 HETSYN REVDAT 5 29-JUL-20 2WKK 1 CAVEAT COMPND REMARK HETNAM REVDAT 5 2 1 LINK SITE ATOM REVDAT 4 21-JAN-15 2WKK 1 REMARK VERSN HET HETSYN REVDAT 4 2 1 LINK HETATM CONECT MASTER REVDAT 3 29-JUN-11 2WKK 1 REMARK HETSYN REVDAT 2 26-JAN-10 2WKK 1 JRNL REMARK REVDAT 1 19-JAN-10 2WKK 0 JRNL AUTH A.BUTSCHI,A.TITZ,M.A.WALTI,V.OLIERIC,K.PASCHINGER,K.NOBAUER, JRNL AUTH 2 X.GUO,P.H.SEEBERGER,I.B.H.WILSON,M.AEBI,M.O.HENGARTNER, JRNL AUTH 3 M.KUNZLER JRNL TITL CAENORHABDITIS ELEGANS N-GLYCAN CORE BETA-GALACTOSIDE JRNL TITL 2 CONFERS SENSITIVITY TOWARDS NEMATOTOXIC FUNGAL GALECTIN JRNL TITL 3 CGL2. JRNL REF PLOS PATHOG. V. 6 E717 2010 JRNL REFN ISSN 1553-7366 JRNL PMID 20062796 JRNL DOI 10.1371/JOURNAL.PPAT.1000717 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 17766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3201 - 3.6147 1.00 7642 149 0.1586 0.1597 REMARK 3 2 3.6147 - 2.8692 1.00 7379 146 0.1415 0.1816 REMARK 3 3 2.8692 - 2.5065 1.00 7345 145 0.1517 0.1949 REMARK 3 4 2.5065 - 2.2773 1.00 7264 143 0.1443 0.1779 REMARK 3 5 2.2773 - 2.1141 1.00 7294 144 0.1295 0.1734 REMARK 3 6 2.1141 - 1.9895 1.00 7258 142 0.1316 0.1800 REMARK 3 7 1.9895 - 1.8898 1.00 7219 143 0.1252 0.1752 REMARK 3 8 1.8898 - 1.8076 1.00 7261 142 0.1282 0.1850 REMARK 3 9 1.8076 - 1.7380 1.00 7182 142 0.1255 0.1798 REMARK 3 10 1.7380 - 1.6780 1.00 7214 142 0.1310 0.1784 REMARK 3 11 1.6780 - 1.6255 1.00 7212 142 0.1492 0.1941 REMARK 3 12 1.6255 - 1.5791 1.00 7176 141 0.1673 0.2085 REMARK 3 13 1.5791 - 1.5375 0.99 7141 141 0.1799 0.2509 REMARK 3 14 1.5375 - 1.5000 0.96 6950 137 0.2177 0.2841 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 50.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.90690 REMARK 3 B22 (A**2) : -2.30480 REMARK 3 B33 (A**2) : -2.42200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 5068 REMARK 3 ANGLE : 1.685 6923 REMARK 3 CHIRALITY : 0.099 779 REMARK 3 PLANARITY : 0.009 896 REMARK 3 DIHEDRAL : 17.631 1894 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WKK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUN-09. REMARK 100 THE DEPOSITION ID IS D_1290040128. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JAN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17766 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 48.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.68 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 8.17 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1ULG REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.10500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.31500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.31000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.31500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.10500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.31000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -0.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 14 CD OE1 NE2 REMARK 470 ARG A 85 CZ NH1 NH2 REMARK 470 LYS C 33 CE NZ REMARK 470 LYS C 117 CD CE NZ REMARK 470 ARG D 85 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 2158 O HOH D 2165 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 126 CB ASN A 126 CG -0.156 REMARK 500 PRO D 149 C ALA D 150 N 0.183 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 149 CA - C - N ANGL. DEV. = -16.5 DEGREES REMARK 500 PRO D 149 O - C - N ANGL. DEV. = -84.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 20 -16.55 88.21 REMARK 500 PHE A 104 -158.72 -101.74 REMARK 500 GLU B 20 -15.80 87.36 REMARK 500 PHE B 104 -153.87 -99.37 REMARK 500 ALA B 127 137.78 -173.30 REMARK 500 GLU C 20 -16.28 88.25 REMARK 500 PHE C 104 -151.47 -92.70 REMARK 500 ALA C 127 141.79 -173.44 REMARK 500 GLU D 20 -18.64 88.73 REMARK 500 PHE D 104 -155.18 -100.54 REMARK 500 ALA D 127 138.14 -170.36 REMARK 500 PRO D 149 -160.39 -51.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO D 149 41.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2003 DISTANCE = 6.70 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG F 1 REMARK 610 NAG G 1 REMARK 610 FUC H 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ULE RELATED DB: PDB REMARK 900 CGL2 IN COMPLEX WITH LINEAR B2 TRISACCHARIDE REMARK 900 RELATED ID: 1ULG RELATED DB: PDB REMARK 900 CGL2 IN COMPLEX WITH THOMSEN-FRIEDENREICH ANTIGEN REMARK 900 RELATED ID: 1ULF RELATED DB: PDB REMARK 900 CGL2 IN COMPLEX WITH BLOOD GROUP A TETRASACCHARIDE REMARK 900 RELATED ID: 1UL9 RELATED DB: PDB REMARK 900 CGL2 LIGANDFREE REMARK 900 RELATED ID: 1ULC RELATED DB: PDB REMARK 900 CGL2 IN COMPLEX WITH LACTOSE REMARK 900 RELATED ID: 1ULD RELATED DB: PDB REMARK 900 CGL2 IN COMPLEX WITH BLOOD GROUP H TYPE II DBREF 2WKK A 1 150 UNP Q9P4R8 CGL2_COPCI 1 150 DBREF 2WKK B 1 150 UNP Q9P4R8 CGL2_COPCI 1 150 DBREF 2WKK C 1 150 UNP Q9P4R8 CGL2_COPCI 1 150 DBREF 2WKK D 1 150 UNP Q9P4R8 CGL2_COPCI 1 150 SEQRES 1 A 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 A 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 A 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 A 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 A 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 A 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 A 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 A 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 A 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 A 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 A 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 A 150 LEU PRO PRO LEU PRO PRO ALA SEQRES 1 B 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 B 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 B 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 B 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 B 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 B 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 B 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 B 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 B 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 B 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 B 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 B 150 LEU PRO PRO LEU PRO PRO ALA SEQRES 1 C 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 C 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 C 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 C 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 C 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 C 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 C 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 C 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 C 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 C 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 C 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 C 150 LEU PRO PRO LEU PRO PRO ALA SEQRES 1 D 150 MET LEU TYR HIS LEU PHE VAL ASN ASN GLN VAL LYS LEU SEQRES 2 D 150 GLN ASN ASP PHE LYS PRO GLU SER VAL ALA ALA ILE ARG SEQRES 3 D 150 SER SER ALA PHE ASN SER LYS GLY GLY THR THR VAL PHE SEQRES 4 D 150 ASN PHE LEU SER ALA GLY GLU ASN ILE LEU LEU HIS ILE SEQRES 5 D 150 SER ILE ARG PRO GLY GLU ASN VAL ILE VAL PHE ASN SER SEQRES 6 D 150 ARG LEU LYS ASN GLY ALA TRP GLY PRO GLU GLU ARG ILE SEQRES 7 D 150 PRO TYR ALA GLU LYS PHE ARG PRO PRO ASN PRO SER ILE SEQRES 8 D 150 THR VAL ILE ASP HIS GLY ASP ARG PHE GLN ILE ARG PHE SEQRES 9 D 150 ASP TYR GLY THR SER ILE TYR TYR ASN LYS ARG ILE LYS SEQRES 10 D 150 GLU ASN ALA ALA ALA ILE ALA TYR ASN ALA GLU ASN SER SEQRES 11 D 150 LEU PHE SER SER PRO VAL THR VAL ASP VAL HIS GLY LEU SEQRES 12 D 150 LEU PRO PRO LEU PRO PRO ALA HET FUC E 1 11 HET GAL E 2 11 HET NAG F 1 10 HET FUC F 2 10 HET GAL F 3 11 HET NAG G 1 20 HET FUC G 2 20 HET GAL G 3 22 HET FUC H 1 9 HET GAL H 2 11 HET GOL C1154 6 HET MG C1155 1 HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 FUC 4(C6 H12 O5) FORMUL 5 GAL 4(C6 H12 O6) FORMUL 6 NAG 2(C8 H15 N O6) FORMUL 9 GOL C3 H8 O3 FORMUL 10 MG MG 2+ FORMUL 11 HOH *818(H2 O) HELIX 1 1 PRO B 56 GLU B 58 5 3 HELIX 2 2 PRO D 56 GLU D 58 5 3 SHEET 1 AA 6 LEU A 2 LEU A 5 0 SHEET 2 AA 6 VAL A 136 HIS A 141 -1 O VAL A 136 N LEU A 5 SHEET 3 AA 6 VAL A 22 ARG A 26 -1 O VAL A 22 N HIS A 141 SHEET 4 AA 6 SER A 90 ASP A 95 -1 O ILE A 91 N ILE A 25 SHEET 5 AA 6 ARG A 99 ARG A 103 -1 O GLN A 101 N ILE A 94 SHEET 6 AA 6 ILE A 110 ASN A 113 -1 O ILE A 110 N ILE A 102 SHEET 1 AB 6 ASN A 9 PHE A 17 0 SHEET 2 AB 6 ALA A 120 ALA A 127 -1 O ALA A 120 N PHE A 17 SHEET 3 AB 6 THR A 37 LEU A 42 -1 O VAL A 38 N ASN A 126 SHEET 4 AB 6 ILE A 48 ARG A 55 -1 N LEU A 49 O PHE A 41 SHEET 5 AB 6 VAL A 60 ARG A 66 -1 O VAL A 60 N ARG A 55 SHEET 6 AB 6 GLU A 76 PRO A 79 -1 O GLU A 76 N PHE A 63 SHEET 1 BA 6 LEU B 2 LEU B 5 0 SHEET 2 BA 6 VAL B 136 HIS B 141 -1 O VAL B 136 N LEU B 5 SHEET 3 BA 6 VAL B 22 ARG B 26 -1 O VAL B 22 N HIS B 141 SHEET 4 BA 6 SER B 90 ASP B 95 -1 O ILE B 91 N ILE B 25 SHEET 5 BA 6 ARG B 99 ARG B 103 -1 O GLN B 101 N ILE B 94 SHEET 6 BA 6 ILE B 110 ASN B 113 -1 O ILE B 110 N ILE B 102 SHEET 1 BB 6 ASN B 9 PHE B 17 0 SHEET 2 BB 6 ALA B 120 ASN B 126 -1 O ALA B 120 N PHE B 17 SHEET 3 BB 6 THR B 37 LEU B 42 -1 O VAL B 38 N ASN B 126 SHEET 4 BB 6 ILE B 48 ARG B 55 -1 N LEU B 49 O PHE B 41 SHEET 5 BB 6 VAL B 60 ARG B 66 -1 O VAL B 60 N ARG B 55 SHEET 6 BB 6 GLU B 76 PRO B 79 -1 O GLU B 76 N PHE B 63 SHEET 1 CA 6 LEU C 2 LEU C 5 0 SHEET 2 CA 6 VAL C 136 HIS C 141 -1 O VAL C 136 N LEU C 5 SHEET 3 CA 6 VAL C 22 ARG C 26 -1 O VAL C 22 N HIS C 141 SHEET 4 CA 6 SER C 90 ASP C 95 -1 O ILE C 91 N ILE C 25 SHEET 5 CA 6 ARG C 99 ARG C 103 -1 O GLN C 101 N ILE C 94 SHEET 6 CA 6 ILE C 110 ASN C 113 -1 O ILE C 110 N ILE C 102 SHEET 1 CB 6 ASN C 9 PHE C 17 0 SHEET 2 CB 6 ALA C 120 ALA C 127 -1 O ALA C 120 N PHE C 17 SHEET 3 CB 6 THR C 37 LEU C 42 -1 O VAL C 38 N ASN C 126 SHEET 4 CB 6 ILE C 48 ARG C 55 -1 N LEU C 49 O PHE C 41 SHEET 5 CB 6 VAL C 60 ARG C 66 -1 O VAL C 60 N ARG C 55 SHEET 6 CB 6 GLU C 76 PRO C 79 -1 O GLU C 76 N PHE C 63 SHEET 1 DA 6 LEU D 2 LEU D 5 0 SHEET 2 DA 6 VAL D 136 HIS D 141 -1 O VAL D 136 N LEU D 5 SHEET 3 DA 6 VAL D 22 ARG D 26 -1 O VAL D 22 N HIS D 141 SHEET 4 DA 6 SER D 90 ASP D 95 -1 O ILE D 91 N ILE D 25 SHEET 5 DA 6 ARG D 99 ARG D 103 -1 O GLN D 101 N ILE D 94 SHEET 6 DA 6 ILE D 110 ASN D 113 -1 O ILE D 110 N ILE D 102 SHEET 1 DB 6 ASN D 9 PHE D 17 0 SHEET 2 DB 6 ALA D 120 ALA D 127 -1 O ALA D 120 N PHE D 17 SHEET 3 DB 6 THR D 37 LEU D 42 -1 O VAL D 38 N ASN D 126 SHEET 4 DB 6 ILE D 48 ARG D 55 -1 N LEU D 49 O PHE D 41 SHEET 5 DB 6 VAL D 60 ARG D 66 -1 O VAL D 60 N ARG D 55 SHEET 6 DB 6 GLU D 76 PRO D 79 -1 O GLU D 76 N PHE D 63 LINK O4 FUC E 1 C1 GAL E 2 1555 1555 1.43 LINK O6 NAG F 1 C1 FUC F 2 1555 1555 1.42 LINK O4 FUC F 2 C1 GAL F 3 1555 1555 1.36 LINK O6 ANAG G 1 C1 AFUC G 2 1555 1555 1.38 LINK O6 BNAG G 1 C1 BFUC G 2 1555 1555 1.28 LINK O4 BFUC G 2 C1 BGAL G 3 1555 1555 1.38 LINK O4 AFUC G 2 C1 AGAL G 3 1555 1555 1.38 LINK O2 FUC H 1 C1 GAL H 2 1555 1555 1.42 CISPEP 1 PRO A 86 PRO A 87 0 1.46 CISPEP 2 SER A 134 PRO A 135 0 2.72 CISPEP 3 PRO B 86 PRO B 87 0 1.53 CISPEP 4 SER B 134 PRO B 135 0 0.07 CISPEP 5 PRO C 86 PRO C 87 0 0.83 CISPEP 6 SER C 134 PRO C 135 0 1.84 CISPEP 7 PRO D 86 PRO D 87 0 0.98 CISPEP 8 SER D 134 PRO D 135 0 0.08 CRYST1 66.210 80.620 120.630 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015103 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012404 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008290 0.00000