data_2WNE # _entry.id 2WNE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2WNE PDBE EBI-40358 WWPDB D_1290040358 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2WLQ unspecified 'NUCLEOPHILE-DISABLED LAM16A MUTANT HOLDS LAMINARIHEPTAOSE (L7) IN A CYCLICAL CONFORMATION' PDB 2W39 unspecified 'GLC(BETA-1-3)GLC DISACCHARIDE IN -1 AND -2 SITES OF LAMINARINASE 16A FROM PHANEROCHAETE CHRYSOSPORIUM' PDB 2W52 unspecified ;2 BETA-GLUCANS (6-O-GLUCOSYL-LAMINARITRIOSE ) IN BOTH DONOR AND ACCEPTOR SITES OF GH16 LAMINARINASE 16A FROM PHANEROCHAETE CHRYSOSPORIUM. ; PDB 2CL2 unspecified ;ENDO-1,3(4)-BETA-GLUCANASE FROM PHANEROCHAETE CHRYSOSPORIUM, SOLVED USING NATIVE SULFUR SAD, EXHIBITING INTACT HEPTASACCHARIDE GLYCOSYLATION ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2WNE _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-07-09 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vasur, J.' 1 'Kawai, R.' 2 'Andersson, E.' 3 'Widmalm, G.' 4 'Jonsson, K.H.M.' 5 'Hansson, H.' 6 'Engstrom, A.' 7 'Einarsson, E.' 8 'Forsberg, Z.' 9 'Igarashi, K.' 10 'Sandgren, M.' 11 'Samejima, M.' 12 'Stahlberg, J.' 13 # _citation.id primary _citation.title 'Synthesis of Cyclic Beta-Glucan Using Laminarinase 16A Glycosynthase Mutant from the Basidiomycete Phanerochaete Chrysosporium.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 132 _citation.page_first 1724 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20078120 _citation.pdbx_database_id_DOI 10.1021/JA909129B # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vasur, J.' 1 ? primary 'Kawai, R.' 2 ? primary 'Jonsson, K.H.M.' 3 ? primary 'Widmalm, G.' 4 ? primary 'Engstrom, A.' 5 ? primary 'Frank, M.' 6 ? primary 'Andersson, E.' 7 ? primary 'Hansson, H.' 8 ? primary 'Forsberg, Z.' 9 ? primary 'Igarashi, K.' 10 ? primary 'Samejima, M.' 11 ? primary 'Sandgren, M.' 12 ? primary 'Stahlberg, J.' 13 ? # _cell.entry_id 2WNE _cell.length_a 38.175 _cell.length_b 47.911 _cell.length_c 152.766 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WNE _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PUTATIVE LAMINARINASE' 31880.686 1 3.2.1.6 YES 'RESIDUES 21-318' 'NUCLEOPHILE MUTANT' 2 branched man ;beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-alpha-D-glucopyranose ; 1153.001 1 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1235.105 1 ? ? ? ? 4 water nat water 18.015 263 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'LAMINARINASE 16A' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ATYHLEDNWVGSAFLSTFTHEAIADPTHGRVNYVDQATALAKNLTYASGDTLILRADHTTTLSPSGPGRNSVRIRSIKTY TTHVAVFDVRHMPQGCGTWPAAWETDEGDWPNGGSVDIIEGVNDQSPNAMTLHTGANCAMPASRTMTGHATNNNCDVNTD GNTGCGVQAPTANSYGPSFNANGGGWYAMERTNSFIKVWFFPRNAGNVPNDIASGPATINTDNWGTPTAFFPNTNCDIGS HFDANNIIINLTFCGDWAGQASIFNGAGCPGSCVDYVNNNPSAFANAYWDIASVRVYQ ; _entity_poly.pdbx_seq_one_letter_code_can ;ATYHLEDNWVGSAFLSTFTHEAIADPTHGRVNYVDQATALAKNLTYASGDTLILRADHTTTLSPSGPGRNSVRIRSIKTY TTHVAVFDVRHMPQGCGTWPAAWETDEGDWPNGGSVDIIEGVNDQSPNAMTLHTGANCAMPASRTMTGHATNNNCDVNTD GNTGCGVQAPTANSYGPSFNANGGGWYAMERTNSFIKVWFFPRNAGNVPNDIASGPATINTDNWGTPTAFFPNTNCDIGS HFDANNIIINLTFCGDWAGQASIFNGAGCPGSCVDYVNNNPSAFANAYWDIASVRVYQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 TYR n 1 4 HIS n 1 5 LEU n 1 6 GLU n 1 7 ASP n 1 8 ASN n 1 9 TRP n 1 10 VAL n 1 11 GLY n 1 12 SER n 1 13 ALA n 1 14 PHE n 1 15 LEU n 1 16 SER n 1 17 THR n 1 18 PHE n 1 19 THR n 1 20 HIS n 1 21 GLU n 1 22 ALA n 1 23 ILE n 1 24 ALA n 1 25 ASP n 1 26 PRO n 1 27 THR n 1 28 HIS n 1 29 GLY n 1 30 ARG n 1 31 VAL n 1 32 ASN n 1 33 TYR n 1 34 VAL n 1 35 ASP n 1 36 GLN n 1 37 ALA n 1 38 THR n 1 39 ALA n 1 40 LEU n 1 41 ALA n 1 42 LYS n 1 43 ASN n 1 44 LEU n 1 45 THR n 1 46 TYR n 1 47 ALA n 1 48 SER n 1 49 GLY n 1 50 ASP n 1 51 THR n 1 52 LEU n 1 53 ILE n 1 54 LEU n 1 55 ARG n 1 56 ALA n 1 57 ASP n 1 58 HIS n 1 59 THR n 1 60 THR n 1 61 THR n 1 62 LEU n 1 63 SER n 1 64 PRO n 1 65 SER n 1 66 GLY n 1 67 PRO n 1 68 GLY n 1 69 ARG n 1 70 ASN n 1 71 SER n 1 72 VAL n 1 73 ARG n 1 74 ILE n 1 75 ARG n 1 76 SER n 1 77 ILE n 1 78 LYS n 1 79 THR n 1 80 TYR n 1 81 THR n 1 82 THR n 1 83 HIS n 1 84 VAL n 1 85 ALA n 1 86 VAL n 1 87 PHE n 1 88 ASP n 1 89 VAL n 1 90 ARG n 1 91 HIS n 1 92 MET n 1 93 PRO n 1 94 GLN n 1 95 GLY n 1 96 CYS n 1 97 GLY n 1 98 THR n 1 99 TRP n 1 100 PRO n 1 101 ALA n 1 102 ALA n 1 103 TRP n 1 104 GLU n 1 105 THR n 1 106 ASP n 1 107 GLU n 1 108 GLY n 1 109 ASP n 1 110 TRP n 1 111 PRO n 1 112 ASN n 1 113 GLY n 1 114 GLY n 1 115 SER n 1 116 VAL n 1 117 ASP n 1 118 ILE n 1 119 ILE n 1 120 GLU n 1 121 GLY n 1 122 VAL n 1 123 ASN n 1 124 ASP n 1 125 GLN n 1 126 SER n 1 127 PRO n 1 128 ASN n 1 129 ALA n 1 130 MET n 1 131 THR n 1 132 LEU n 1 133 HIS n 1 134 THR n 1 135 GLY n 1 136 ALA n 1 137 ASN n 1 138 CYS n 1 139 ALA n 1 140 MET n 1 141 PRO n 1 142 ALA n 1 143 SER n 1 144 ARG n 1 145 THR n 1 146 MET n 1 147 THR n 1 148 GLY n 1 149 HIS n 1 150 ALA n 1 151 THR n 1 152 ASN n 1 153 ASN n 1 154 ASN n 1 155 CYS n 1 156 ASP n 1 157 VAL n 1 158 ASN n 1 159 THR n 1 160 ASP n 1 161 GLY n 1 162 ASN n 1 163 THR n 1 164 GLY n 1 165 CYS n 1 166 GLY n 1 167 VAL n 1 168 GLN n 1 169 ALA n 1 170 PRO n 1 171 THR n 1 172 ALA n 1 173 ASN n 1 174 SER n 1 175 TYR n 1 176 GLY n 1 177 PRO n 1 178 SER n 1 179 PHE n 1 180 ASN n 1 181 ALA n 1 182 ASN n 1 183 GLY n 1 184 GLY n 1 185 GLY n 1 186 TRP n 1 187 TYR n 1 188 ALA n 1 189 MET n 1 190 GLU n 1 191 ARG n 1 192 THR n 1 193 ASN n 1 194 SER n 1 195 PHE n 1 196 ILE n 1 197 LYS n 1 198 VAL n 1 199 TRP n 1 200 PHE n 1 201 PHE n 1 202 PRO n 1 203 ARG n 1 204 ASN n 1 205 ALA n 1 206 GLY n 1 207 ASN n 1 208 VAL n 1 209 PRO n 1 210 ASN n 1 211 ASP n 1 212 ILE n 1 213 ALA n 1 214 SER n 1 215 GLY n 1 216 PRO n 1 217 ALA n 1 218 THR n 1 219 ILE n 1 220 ASN n 1 221 THR n 1 222 ASP n 1 223 ASN n 1 224 TRP n 1 225 GLY n 1 226 THR n 1 227 PRO n 1 228 THR n 1 229 ALA n 1 230 PHE n 1 231 PHE n 1 232 PRO n 1 233 ASN n 1 234 THR n 1 235 ASN n 1 236 CYS n 1 237 ASP n 1 238 ILE n 1 239 GLY n 1 240 SER n 1 241 HIS n 1 242 PHE n 1 243 ASP n 1 244 ALA n 1 245 ASN n 1 246 ASN n 1 247 ILE n 1 248 ILE n 1 249 ILE n 1 250 ASN n 1 251 LEU n 1 252 THR n 1 253 PHE n 1 254 CYS n 1 255 GLY n 1 256 ASP n 1 257 TRP n 1 258 ALA n 1 259 GLY n 1 260 GLN n 1 261 ALA n 1 262 SER n 1 263 ILE n 1 264 PHE n 1 265 ASN n 1 266 GLY n 1 267 ALA n 1 268 GLY n 1 269 CYS n 1 270 PRO n 1 271 GLY n 1 272 SER n 1 273 CYS n 1 274 VAL n 1 275 ASP n 1 276 TYR n 1 277 VAL n 1 278 ASN n 1 279 ASN n 1 280 ASN n 1 281 PRO n 1 282 SER n 1 283 ALA n 1 284 PHE n 1 285 ALA n 1 286 ASN n 1 287 ALA n 1 288 TYR n 1 289 TRP n 1 290 ASP n 1 291 ILE n 1 292 ALA n 1 293 SER n 1 294 VAL n 1 295 ARG n 1 296 VAL n 1 297 TYR n 1 298 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'WHITE-ROT FUNGUS' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PHANEROCHAETE CHRYSOSPORIUM' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5306 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'PICHIA PASTORIS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain KM71H _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPICZALPHAA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q874E3_PHACH _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q874E3 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2WNE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 298 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q874E3 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 318 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 298 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2WNE _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 115 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q874E3 _struct_ref_seq_dif.db_mon_id GLU _struct_ref_seq_dif.pdbx_seq_db_seq_num 135 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 115 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose ? 'C6 H12 O6' 180.156 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose ? 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2WNE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2 _exptl_crystal.density_percent_sol 40 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;HANGING DROP: 1 UL 2MG/ML PROTEIN MIXED WITH 1 UL RESERVOIR SOLUTION: 20% PEG 3350, 0.2 M NH4NO3 PH 5 (REERVOIR VOLUME 500 UL). XTALS WERE SOAKED O/N IN DROP OF 10 MM AL7F AND EQUAL VOLUME 35% PEG, 0.2 M NH4NO3 PH 5. ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2008-05-16 _diffrn_detector.details 'MULTILAYER MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'BENT SI (111) CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0379 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-2' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-2 _diffrn_source.pdbx_wavelength 1.0379 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2WNE _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.90 _reflns.d_resolution_high 2.11 _reflns.number_obs 16720 _reflns.number_all ? _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.00 _reflns.B_iso_Wilson_estimate 17.7 _reflns.pdbx_redundancy 3.6 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.20 _reflns_shell.percent_possible_all 81.0 _reflns_shell.Rmerge_I_obs 0.24 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.00 _reflns_shell.pdbx_redundancy 3.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2WNE _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16341 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.124 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.589 _refine.ls_d_res_high 2.124 _refine.ls_percent_reflns_obs 98.839 _refine.ls_R_factor_obs 0.163 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1598 _refine.ls_R_factor_R_free 0.2200 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.08 _refine.ls_number_reflns_R_free 820 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.952 _refine.correlation_coeff_Fo_to_Fc_free 0.904 _refine.B_iso_mean 13.021 _refine.aniso_B[1][1] -0.006 _refine.aniso_B[2][2] 0.015 _refine.aniso_B[3][3] -0.009 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct OTHER _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values RESTRAINED _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.261 _refine.pdbx_overall_ESU_R_Free 0.199 _refine.overall_SU_ML 0.122 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.555 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2244 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 161 _refine_hist.number_atoms_solvent 263 _refine_hist.number_atoms_total 2668 _refine_hist.d_res_high 2.124 _refine_hist.d_res_low 40.589 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.021 ? 2515 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.477 1.976 ? 3477 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.099 5.000 ? 303 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.450 24.609 ? 115 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.627 15.000 ? 299 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.578 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.100 0.200 ? 412 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1910 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.194 0.200 ? 1164 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.308 0.200 ? 1709 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.110 0.200 ? 194 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.178 0.200 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.142 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.635 1.500 ? 1528 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.084 2.000 ? 2409 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.732 3.000 ? 1125 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.594 4.500 ? 1068 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.124 _refine_ls_shell.d_res_low 2.179 _refine_ls_shell.number_reflns_R_work 1041 _refine_ls_shell.R_factor_R_work 0.182 _refine_ls_shell.percent_reflns_obs 91.115 _refine_ls_shell.R_factor_R_free 0.265 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 46 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2WNE _struct.title 'Mutant Laminarinase 16A cyclizes laminariheptaose' _struct.pdbx_descriptor 'PUTATIVE LAMINARINASE (E.C.3.2.1.6)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2WNE _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;LAMINARIN, FAMILY 16, CYCLICAL POYSACCHARIDES, GLYCOSYL HYDROLASE, BETA SANDWICH, BASIDIOMYCETE, BETA-GLUCANASE, GH7, GH16, LAM16A, BETA-1\, 6-GLUCAN, HYDROLASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 11 ? THR A 17 ? GLY A 11 THR A 17 1 ? 7 HELX_P HELX_P2 2 GLN A 36 ? ALA A 41 ? GLN A 36 ALA A 41 1 ? 6 HELX_P HELX_P3 3 GLU A 107 ? ASP A 109 ? GLU A 107 ASP A 109 1 ? 3 HELX_P HELX_P4 4 ALA A 172 ? SER A 174 ? ALA A 172 SER A 174 1 ? 3 HELX_P HELX_P5 5 GLY A 176 ? ALA A 181 ? GLY A 176 ALA A 181 1 ? 6 HELX_P HELX_P6 6 ASN A 210 ? ALA A 213 ? ASN A 210 ALA A 213 1 ? 4 HELX_P HELX_P7 7 THR A 221 ? ASN A 223 ? THR A 221 ASN A 223 1 ? 3 HELX_P HELX_P8 8 ILE A 238 ? HIS A 241 ? ILE A 238 HIS A 241 1 ? 4 HELX_P HELX_P9 9 GLY A 255 ? ALA A 258 ? GLY A 255 ALA A 258 1 ? 4 HELX_P HELX_P10 10 ALA A 261 ? GLY A 266 ? ALA A 261 GLY A 266 1 ? 6 HELX_P HELX_P11 11 CYS A 273 ? ASN A 279 ? CYS A 273 ASN A 279 1 ? 7 HELX_P HELX_P12 12 PRO A 281 ? PHE A 284 ? PRO A 281 PHE A 284 1 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 96 SG ? ? ? 1_555 A CYS 269 SG ? ? A CYS 96 A CYS 269 1_555 ? ? ? ? ? ? ? 2.018 ? ? disulf2 disulf ? ? A CYS 138 SG ? ? ? 1_555 A CYS 236 SG ? ? A CYS 138 A CYS 236 1_555 ? ? ? ? ? ? ? 2.018 ? ? disulf3 disulf ? ? A CYS 155 SG ? ? ? 1_555 A CYS 165 SG ? ? A CYS 155 A CYS 165 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf4 disulf ? ? A CYS 254 SG ? ? ? 1_555 A CYS 273 SG ? ? A CYS 254 A CYS 273 1_555 ? ? ? ? ? ? ? 2.016 ? ? covale1 covale one ? A ASN 43 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 43 C NAG 1 1_555 ? ? ? ? ? ? ? 1.446 ? N-Glycosylation covale2 covale one ? B GLC . O3 ? ? ? 1_555 B BGC . C1 ? ? B GLC 1 B BGC 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale3 covale one ? B BGC . O3 ? ? ? 1_555 B BGC . C1 ? ? B BGC 2 B BGC 3 1_555 ? ? ? ? ? ? ? 1.436 ? ? covale4 covale one ? B BGC . O3 ? ? ? 1_555 B BGC . C1 ? ? B BGC 3 B BGC 4 1_555 ? ? ? ? ? ? ? 1.433 ? ? covale5 covale one ? B BGC . O3 ? ? ? 1_555 B BGC . C1 ? ? B BGC 4 B BGC 5 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale6 covale one ? B BGC . O3 ? ? ? 1_555 B BGC . C1 ? ? B BGC 5 B BGC 6 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale7 covale one ? B BGC . O3 ? ? ? 1_555 B BGC . C1 ? ? B BGC 6 B BGC 7 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale8 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale9 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale10 covale one ? C BMA . O6 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale11 covale one ? C MAN . O6 ? ? ? 1_555 C MAN . C1 ? ? C MAN 4 C MAN 5 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale12 covale one ? C MAN . O3 ? ? ? 1_555 C MAN . C1 ? ? C MAN 4 C MAN 7 1_555 ? ? ? ? ? ? ? 1.435 ? ? covale13 covale one ? C MAN . O2 ? ? ? 1_555 C MAN . C1 ? ? C MAN 5 C MAN 6 1_555 ? ? ? ? ? ? ? 1.448 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TRP 110 A . ? TRP 110 A PRO 111 A ? PRO 111 A 1 1.71 2 SER 126 A . ? SER 126 A PRO 127 A ? PRO 127 A 1 0.66 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A1 ? 3 ? A2 ? 2 ? A3 ? 3 ? A4 ? 2 ? A5 ? 3 ? A6 ? 4 ? A7 ? 3 ? A8 ? 4 ? A9 ? 4 ? AA ? 2 ? AB ? 3 ? AC ? 1 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A1 1 2 ? anti-parallel A1 2 3 ? anti-parallel A2 1 2 ? anti-parallel A3 1 2 ? parallel A3 2 3 ? anti-parallel A4 1 2 ? anti-parallel A5 1 2 ? anti-parallel A5 2 3 ? anti-parallel A6 1 2 ? anti-parallel A6 2 3 ? anti-parallel A6 3 4 ? anti-parallel A7 1 2 ? anti-parallel A7 2 3 ? anti-parallel A8 1 2 ? anti-parallel A8 2 3 ? anti-parallel A8 3 4 ? anti-parallel A9 1 2 ? anti-parallel A9 2 3 ? anti-parallel A9 3 4 ? parallel AA 1 2 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A1 1 THR A 2 ? VAL A 10 ? THR A 2 VAL A 10 A1 2 ALA A 217 ? ASN A 220 ? ALA A 217 ASN A 220 A1 3 ALA A 287 ? GLN A 298 ? ALA A 287 GLN A 298 A2 1 PHE A 18 ? GLU A 21 ? PHE A 18 GLU A 21 A2 2 PRO A 67 ? MET A 92 ? PRO A 67 MET A 92 A3 1 GLY A 29 ? VAL A 34 ? GLY A 29 VAL A 34 A3 2 PRO A 67 ? MET A 92 ? PRO A 67 MET A 92 A3 3 PHE A 242 ? CYS A 254 ? PHE A 242 CYS A 254 A4 1 LEU A 44 ? SER A 48 ? LEU A 44 SER A 48 A4 2 THR A 51 ? ASP A 57 ? THR A 51 ASP A 57 A5 1 THR A 51 ? ASP A 57 ? THR A 51 ASP A 57 A5 2 PRO A 67 ? MET A 92 ? PRO A 67 MET A 92 A5 3 ALA A 287 ? GLN A 298 ? ALA A 287 GLN A 298 A6 1 PRO A 67 ? MET A 92 ? PRO A 67 MET A 92 A6 2 GLY A 183 ? THR A 192 ? GLY A 183 THR A 192 A6 3 PHE A 242 ? CYS A 254 ? PHE A 242 CYS A 254 A6 4 ALA A 287 ? GLN A 298 ? ALA A 287 GLN A 298 A7 1 GLY A 97 ? ASP A 106 ? GLY A 97 ASP A 106 A7 2 GLY A 113 ? GLU A 120 ? GLY A 113 GLU A 120 A7 3 PHE A 242 ? CYS A 254 ? PHE A 242 CYS A 254 A8 1 ASN A 128 ? MET A 140 ? ASN A 128 MET A 140 A8 2 MET A 146 ? VAL A 157 ? MET A 146 VAL A 157 A8 3 ASN A 162 ? ALA A 169 ? ASN A 162 ALA A 169 A8 4 ASN A 235 ? CYS A 236 ? ASN A 235 CYS A 236 A9 1 MET A 146 ? VAL A 157 ? MET A 146 VAL A 157 A9 2 THR A 159 ? ASP A 160 ? THR A 159 ASP A 160 A9 3 ASN A 162 ? ALA A 169 ? ASN A 162 ALA A 169 A9 4 PRO A 227 ? ASN A 233 ? PRO A 227 ASN A 233 AA 1 THR A 159 ? ASP A 160 ? THR A 159 ASP A 160 AA 2 ASN A 162 ? ALA A 169 ? ASN A 162 ALA A 169 AB 1 GLY A 183 ? THR A 192 ? GLY A 183 THR A 192 AB 2 SER A 194 ? ARG A 203 ? SER A 194 ARG A 203 AB 3 PRO A 227 ? ASN A 233 ? PRO A 227 ASN A 233 AC 1 PRO A 227 ? ASN A 233 ? PRO A 227 ASN A 233 AC 2 ASN A 235 ? CYS A 236 ? ASN A 235 CYS A 236 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A1 1 2 O LEU A 5 ? O LEU A 5 N ALA A 217 ? N ALA A 217 A1 2 3 O GLU A 6 ? O GLU A 6 N VAL A 296 ? N VAL A 296 A2 1 2 O GLU A 21 ? O GLU A 21 N ARG A 73 ? N ARG A 73 A3 1 2 O ASN A 32 ? O ASN A 32 N ARG A 69 ? N ARG A 69 A3 2 3 O ARG A 30 ? O ARG A 30 N PHE A 253 ? N PHE A 253 A4 1 2 N TYR A 46 ? N TYR A 46 O ILE A 53 ? O ILE A 53 A5 1 2 O ASP A 57 ? O ASP A 57 N ASN A 70 ? N ASN A 70 A5 2 3 N LEU A 54 ? N LEU A 54 O TRP A 289 ? O TRP A 289 A6 1 2 O PHE A 87 ? O PHE A 87 N TYR A 187 ? N TYR A 187 A6 2 3 O SER A 76 ? O SER A 76 N ILE A 247 ? N ILE A 247 A6 3 4 O VAL A 86 ? O VAL A 86 N ARG A 295 ? N ARG A 295 A7 1 2 N GLU A 104 ? N GLU A 104 O VAL A 116 ? O VAL A 116 A7 2 3 N TRP A 103 ? N TRP A 103 O ILE A 248 ? O ILE A 248 A8 1 2 O MET A 140 ? O MET A 140 N ASN A 153 ? N ASN A 153 A8 2 3 N ASN A 128 ? N ASN A 128 O ALA A 169 ? O ALA A 169 A8 3 4 O ALA A 139 ? O ALA A 139 N ASN A 235 ? N ASN A 235 A9 1 2 N ASP A 156 ? N ASP A 156 O THR A 159 ? O THR A 159 A9 2 3 N HIS A 149 ? N HIS A 149 O GLN A 168 ? O GLN A 168 A9 3 4 O GLY A 148 ? O GLY A 148 N THR A 228 ? N THR A 228 AA 1 2 N LEU A 132 ? N LEU A 132 O CYS A 165 ? O CYS A 165 AB 1 2 N ALA A 188 ? N ALA A 188 O TRP A 199 ? O TRP A 199 AB 2 3 N ILE A 196 ? N ILE A 196 O PHE A 231 ? O PHE A 231 AC 1 2 N VAL A 198 ? N VAL A 198 O ALA A 229 ? O ALA A 229 # _database_PDB_matrix.entry_id 2WNE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2WNE _atom_sites.fract_transf_matrix[1][1] 0.026195 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020872 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006546 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 THR 2 2 2 THR THR A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 HIS 4 4 4 HIS HIS A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 HIS 20 20 20 HIS HIS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 TYR 33 33 33 TYR TYR A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 THR 59 59 59 THR THR A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 TYR 80 80 80 TYR TYR A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 MET 92 92 92 MET MET A . n A 1 93 PRO 93 93 93 PRO PRO A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 THR 98 98 98 THR THR A . n A 1 99 TRP 99 99 99 TRP TRP A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 TRP 103 103 103 TRP TRP A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 TRP 110 110 110 TRP TRP A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 VAL 122 122 122 VAL VAL A . n A 1 123 ASN 123 123 123 ASN ASN A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 MET 130 130 130 MET MET A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 HIS 133 133 133 HIS HIS A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 CYS 138 138 138 CYS CYS A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 MET 140 140 140 MET MET A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 THR 145 145 145 THR THR A . n A 1 146 MET 146 146 146 MET MET A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 ASN 154 154 154 ASN ASN A . n A 1 155 CYS 155 155 155 CYS CYS A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 ASN 158 158 158 ASN ASN A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 CYS 165 165 165 CYS CYS A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 GLN 168 168 168 GLN GLN A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 THR 171 171 171 THR THR A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 ASN 173 173 173 ASN ASN A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 TYR 175 175 175 TYR TYR A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 PHE 179 179 179 PHE PHE A . n A 1 180 ASN 180 180 180 ASN ASN A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 TRP 186 186 186 TRP TRP A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 MET 189 189 189 MET MET A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 ARG 191 191 191 ARG ARG A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 ASN 193 193 193 ASN ASN A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 PHE 195 195 195 PHE PHE A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 LYS 197 197 197 LYS LYS A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 TRP 199 199 199 TRP TRP A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 PHE 201 201 201 PHE PHE A . n A 1 202 PRO 202 202 202 PRO PRO A . n A 1 203 ARG 203 203 203 ARG ARG A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 ASN 207 207 207 ASN ASN A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 PRO 209 209 209 PRO PRO A . n A 1 210 ASN 210 210 210 ASN ASN A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 PRO 216 216 216 PRO PRO A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 THR 218 218 218 THR THR A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 THR 221 221 221 THR THR A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 ASN 223 223 223 ASN ASN A . n A 1 224 TRP 224 224 224 TRP TRP A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 PRO 227 227 227 PRO PRO A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 PHE 231 231 231 PHE PHE A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 ASN 233 233 233 ASN ASN A . n A 1 234 THR 234 234 234 THR THR A . n A 1 235 ASN 235 235 235 ASN ASN A . n A 1 236 CYS 236 236 236 CYS CYS A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 SER 240 240 240 SER SER A . n A 1 241 HIS 241 241 241 HIS HIS A . n A 1 242 PHE 242 242 242 PHE PHE A . n A 1 243 ASP 243 243 243 ASP ASP A . n A 1 244 ALA 244 244 244 ALA ALA A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 ASN 246 246 246 ASN ASN A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 ASN 250 250 250 ASN ASN A . n A 1 251 LEU 251 251 251 LEU LEU A . n A 1 252 THR 252 252 252 THR THR A . n A 1 253 PHE 253 253 253 PHE PHE A . n A 1 254 CYS 254 254 254 CYS CYS A . n A 1 255 GLY 255 255 255 GLY GLY A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 TRP 257 257 257 TRP TRP A . n A 1 258 ALA 258 258 258 ALA ALA A . n A 1 259 GLY 259 259 259 GLY GLY A . n A 1 260 GLN 260 260 260 GLN GLN A . n A 1 261 ALA 261 261 261 ALA ALA A . n A 1 262 SER 262 262 262 SER SER A . n A 1 263 ILE 263 263 263 ILE ILE A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 ASN 265 265 265 ASN ASN A . n A 1 266 GLY 266 266 266 GLY GLY A . n A 1 267 ALA 267 267 267 ALA ALA A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 CYS 269 269 269 CYS CYS A . n A 1 270 PRO 270 270 270 PRO PRO A . n A 1 271 GLY 271 271 271 GLY GLY A . n A 1 272 SER 272 272 272 SER SER A . n A 1 273 CYS 273 273 273 CYS CYS A . n A 1 274 VAL 274 274 274 VAL VAL A . n A 1 275 ASP 275 275 275 ASP ASP A . n A 1 276 TYR 276 276 276 TYR TYR A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 ASN 278 278 278 ASN ASN A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 ASN 280 280 280 ASN ASN A . n A 1 281 PRO 281 281 281 PRO PRO A . n A 1 282 SER 282 282 282 SER SER A . n A 1 283 ALA 283 283 283 ALA ALA A . n A 1 284 PHE 284 284 284 PHE PHE A . n A 1 285 ALA 285 285 285 ALA ALA A . n A 1 286 ASN 286 286 286 ASN ASN A . n A 1 287 ALA 287 287 287 ALA ALA A . n A 1 288 TYR 288 288 288 TYR TYR A . n A 1 289 TRP 289 289 289 TRP TRP A . n A 1 290 ASP 290 290 290 ASP ASP A . n A 1 291 ILE 291 291 291 ILE ILE A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 SER 293 293 293 SER SER A . n A 1 294 VAL 294 294 294 VAL VAL A . n A 1 295 ARG 295 295 295 ARG ARG A . n A 1 296 VAL 296 296 296 VAL VAL A . n A 1 297 TYR 297 297 297 TYR TYR A . n A 1 298 GLN 298 298 298 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 501 2244 HOH HOH A . D 4 HOH 2 502 2045 HOH HOH A . D 4 HOH 3 503 2105 HOH HOH A . D 4 HOH 4 504 2194 HOH HOH A . D 4 HOH 5 505 2095 HOH HOH A . D 4 HOH 6 506 2160 HOH HOH A . D 4 HOH 7 507 2171 HOH HOH A . D 4 HOH 8 508 2041 HOH HOH A . D 4 HOH 9 509 2165 HOH HOH A . D 4 HOH 10 510 2240 HOH HOH A . D 4 HOH 11 511 2159 HOH HOH A . D 4 HOH 12 512 2113 HOH HOH A . D 4 HOH 13 513 2223 HOH HOH A . D 4 HOH 14 514 2203 HOH HOH A . D 4 HOH 15 515 2055 HOH HOH A . D 4 HOH 16 516 2192 HOH HOH A . D 4 HOH 17 517 2232 HOH HOH A . D 4 HOH 18 518 2090 HOH HOH A . D 4 HOH 19 519 2086 HOH HOH A . D 4 HOH 20 520 2241 HOH HOH A . D 4 HOH 21 521 2205 HOH HOH A . D 4 HOH 22 522 2158 HOH HOH A . D 4 HOH 23 523 2122 HOH HOH A . D 4 HOH 24 524 2166 HOH HOH A . D 4 HOH 25 525 2002 HOH HOH A . D 4 HOH 26 526 2248 HOH HOH A . D 4 HOH 27 527 2117 HOH HOH A . D 4 HOH 28 528 2049 HOH HOH A . D 4 HOH 29 529 2098 HOH HOH A . D 4 HOH 30 530 2009 HOH HOH A . D 4 HOH 31 531 2029 HOH HOH A . D 4 HOH 32 532 2116 HOH HOH A . D 4 HOH 33 533 2167 HOH HOH A . D 4 HOH 34 534 2012 HOH HOH A . D 4 HOH 35 535 2072 HOH HOH A . D 4 HOH 36 536 2024 HOH HOH A . D 4 HOH 37 537 2066 HOH HOH A . D 4 HOH 38 538 2112 HOH HOH A . D 4 HOH 39 539 2242 HOH HOH A . D 4 HOH 40 540 2010 HOH HOH A . D 4 HOH 41 541 2073 HOH HOH A . D 4 HOH 42 542 2036 HOH HOH A . D 4 HOH 43 543 2120 HOH HOH A . D 4 HOH 44 544 2017 HOH HOH A . D 4 HOH 45 545 2243 HOH HOH A . D 4 HOH 46 546 2185 HOH HOH A . D 4 HOH 47 547 2217 HOH HOH A . D 4 HOH 48 548 2149 HOH HOH A . D 4 HOH 49 549 2189 HOH HOH A . D 4 HOH 50 550 2134 HOH HOH A . D 4 HOH 51 551 2238 HOH HOH A . D 4 HOH 52 552 2118 HOH HOH A . D 4 HOH 53 553 2087 HOH HOH A . D 4 HOH 54 554 2224 HOH HOH A . D 4 HOH 55 555 2074 HOH HOH A . D 4 HOH 56 556 2220 HOH HOH A . D 4 HOH 57 557 2080 HOH HOH A . D 4 HOH 58 558 2236 HOH HOH A . D 4 HOH 59 559 2038 HOH HOH A . D 4 HOH 60 560 2106 HOH HOH A . D 4 HOH 61 561 2146 HOH HOH A . D 4 HOH 62 562 2109 HOH HOH A . D 4 HOH 63 563 2119 HOH HOH A . D 4 HOH 64 564 2234 HOH HOH A . D 4 HOH 65 565 2177 HOH HOH A . D 4 HOH 66 566 2005 HOH HOH A . D 4 HOH 67 567 2178 HOH HOH A . D 4 HOH 68 568 2003 HOH HOH A . D 4 HOH 69 569 2132 HOH HOH A . D 4 HOH 70 570 2141 HOH HOH A . D 4 HOH 71 571 2173 HOH HOH A . D 4 HOH 72 572 2197 HOH HOH A . D 4 HOH 73 573 2046 HOH HOH A . D 4 HOH 74 574 2129 HOH HOH A . D 4 HOH 75 575 2237 HOH HOH A . D 4 HOH 76 576 2127 HOH HOH A . D 4 HOH 77 577 2211 HOH HOH A . D 4 HOH 78 578 2042 HOH HOH A . D 4 HOH 79 579 2150 HOH HOH A . D 4 HOH 80 580 2216 HOH HOH A . D 4 HOH 81 581 2200 HOH HOH A . D 4 HOH 82 582 2003 HOH HOH A . D 4 HOH 83 583 2006 HOH HOH A . D 4 HOH 84 584 2161 HOH HOH A . D 4 HOH 85 585 2199 HOH HOH A . D 4 HOH 86 586 2212 HOH HOH A . D 4 HOH 87 587 2060 HOH HOH A . D 4 HOH 88 588 2032 HOH HOH A . D 4 HOH 89 589 2128 HOH HOH A . D 4 HOH 90 590 2009 HOH HOH A . D 4 HOH 91 591 2196 HOH HOH A . D 4 HOH 92 592 2067 HOH HOH A . D 4 HOH 93 593 2168 HOH HOH A . D 4 HOH 94 594 2111 HOH HOH A . D 4 HOH 95 595 2172 HOH HOH A . D 4 HOH 96 596 2252 HOH HOH A . D 4 HOH 97 597 2231 HOH HOH A . D 4 HOH 98 598 2096 HOH HOH A . D 4 HOH 99 599 2110 HOH HOH A . D 4 HOH 100 600 2108 HOH HOH A . D 4 HOH 101 601 2083 HOH HOH A . D 4 HOH 102 602 2195 HOH HOH A . D 4 HOH 103 603 2006 HOH HOH A . D 4 HOH 104 604 2235 HOH HOH A . D 4 HOH 105 605 2115 HOH HOH A . D 4 HOH 106 606 2187 HOH HOH A . D 4 HOH 107 607 2142 HOH HOH A . D 4 HOH 108 608 2188 HOH HOH A . D 4 HOH 109 609 2011 HOH HOH A . D 4 HOH 110 610 2084 HOH HOH A . D 4 HOH 111 611 2004 HOH HOH A . D 4 HOH 112 612 2016 HOH HOH A . D 4 HOH 113 613 2210 HOH HOH A . D 4 HOH 114 614 2151 HOH HOH A . D 4 HOH 115 615 2001 HOH HOH A . D 4 HOH 116 616 2039 HOH HOH A . D 4 HOH 117 617 2062 HOH HOH A . D 4 HOH 118 618 2233 HOH HOH A . D 4 HOH 119 619 2239 HOH HOH A . D 4 HOH 120 620 2169 HOH HOH A . D 4 HOH 121 621 2145 HOH HOH A . D 4 HOH 122 622 2040 HOH HOH A . D 4 HOH 123 623 2208 HOH HOH A . D 4 HOH 124 624 2136 HOH HOH A . D 4 HOH 125 625 2020 HOH HOH A . D 4 HOH 126 626 2204 HOH HOH A . D 4 HOH 127 627 2018 HOH HOH A . D 4 HOH 128 628 2008 HOH HOH A . D 4 HOH 129 629 2101 HOH HOH A . D 4 HOH 130 630 2230 HOH HOH A . D 4 HOH 131 631 2075 HOH HOH A . D 4 HOH 132 632 2219 HOH HOH A . D 4 HOH 133 633 2175 HOH HOH A . D 4 HOH 134 634 2022 HOH HOH A . D 4 HOH 135 635 2107 HOH HOH A . D 4 HOH 136 636 2229 HOH HOH A . D 4 HOH 137 637 2124 HOH HOH A . D 4 HOH 138 638 2099 HOH HOH A . D 4 HOH 139 639 2133 HOH HOH A . D 4 HOH 140 640 2005 HOH HOH A . D 4 HOH 141 641 2170 HOH HOH A . D 4 HOH 142 642 2228 HOH HOH A . D 4 HOH 143 643 2250 HOH HOH A . D 4 HOH 144 644 2031 HOH HOH A . D 4 HOH 145 645 2033 HOH HOH A . D 4 HOH 146 646 2078 HOH HOH A . D 4 HOH 147 647 2174 HOH HOH A . D 4 HOH 148 648 2114 HOH HOH A . D 4 HOH 149 649 2097 HOH HOH A . D 4 HOH 150 650 2184 HOH HOH A . D 4 HOH 151 651 2179 HOH HOH A . D 4 HOH 152 652 2215 HOH HOH A . D 4 HOH 153 653 2028 HOH HOH A . D 4 HOH 154 654 2007 HOH HOH A . D 4 HOH 155 655 2154 HOH HOH A . D 4 HOH 156 656 2013 HOH HOH A . D 4 HOH 157 657 2191 HOH HOH A . D 4 HOH 158 658 2214 HOH HOH A . D 4 HOH 159 659 2088 HOH HOH A . D 4 HOH 160 660 2081 HOH HOH A . D 4 HOH 161 661 2140 HOH HOH A . D 4 HOH 162 662 2249 HOH HOH A . D 4 HOH 163 663 2093 HOH HOH A . D 4 HOH 164 664 2198 HOH HOH A . D 4 HOH 165 665 2157 HOH HOH A . D 4 HOH 166 666 2025 HOH HOH A . D 4 HOH 167 667 2037 HOH HOH A . D 4 HOH 168 668 2182 HOH HOH A . D 4 HOH 169 669 2164 HOH HOH A . D 4 HOH 170 670 2176 HOH HOH A . D 4 HOH 171 671 2026 HOH HOH A . D 4 HOH 172 672 2135 HOH HOH A . D 4 HOH 173 673 2148 HOH HOH A . D 4 HOH 174 674 2121 HOH HOH A . D 4 HOH 175 675 2048 HOH HOH A . D 4 HOH 176 676 2071 HOH HOH A . D 4 HOH 177 677 2044 HOH HOH A . D 4 HOH 178 678 2059 HOH HOH A . D 4 HOH 179 679 2209 HOH HOH A . D 4 HOH 180 680 2222 HOH HOH A . D 4 HOH 181 681 2207 HOH HOH A . D 4 HOH 182 682 2152 HOH HOH A . D 4 HOH 183 683 2068 HOH HOH A . D 4 HOH 184 684 2104 HOH HOH A . D 4 HOH 185 685 2131 HOH HOH A . D 4 HOH 186 686 2027 HOH HOH A . D 4 HOH 187 687 2186 HOH HOH A . D 4 HOH 188 688 2218 HOH HOH A . D 4 HOH 189 689 2221 HOH HOH A . D 4 HOH 190 690 2227 HOH HOH A . D 4 HOH 191 691 2057 HOH HOH A . D 4 HOH 192 692 2213 HOH HOH A . D 4 HOH 193 693 2085 HOH HOH A . D 4 HOH 194 694 2147 HOH HOH A . D 4 HOH 195 695 2251 HOH HOH A . D 4 HOH 196 696 2190 HOH HOH A . D 4 HOH 197 697 2245 HOH HOH A . D 4 HOH 198 698 2181 HOH HOH A . D 4 HOH 199 699 2143 HOH HOH A . D 4 HOH 200 700 2125 HOH HOH A . D 4 HOH 201 701 2103 HOH HOH A . D 4 HOH 202 702 2126 HOH HOH A . D 4 HOH 203 703 2201 HOH HOH A . D 4 HOH 204 704 2202 HOH HOH A . D 4 HOH 205 705 2102 HOH HOH A . D 4 HOH 206 706 2163 HOH HOH A . D 4 HOH 207 707 2138 HOH HOH A . D 4 HOH 208 708 2156 HOH HOH A . D 4 HOH 209 709 2004 HOH HOH A . D 4 HOH 210 710 2056 HOH HOH A . D 4 HOH 211 711 2130 HOH HOH A . D 4 HOH 212 712 2008 HOH HOH A . D 4 HOH 213 713 2183 HOH HOH A . D 4 HOH 214 714 2225 HOH HOH A . D 4 HOH 215 715 2123 HOH HOH A . D 4 HOH 216 716 2137 HOH HOH A . D 4 HOH 217 717 2089 HOH HOH A . D 4 HOH 218 718 2091 HOH HOH A . D 4 HOH 219 719 2069 HOH HOH A . D 4 HOH 220 720 2247 HOH HOH A . D 4 HOH 221 721 2043 HOH HOH A . D 4 HOH 222 722 2100 HOH HOH A . D 4 HOH 223 723 2010 HOH HOH A . D 4 HOH 224 724 2144 HOH HOH A . D 4 HOH 225 725 2035 HOH HOH A . D 4 HOH 226 726 2226 HOH HOH A . D 4 HOH 227 727 2058 HOH HOH A . D 4 HOH 228 728 2052 HOH HOH A . D 4 HOH 229 729 2180 HOH HOH A . D 4 HOH 230 730 2155 HOH HOH A . D 4 HOH 231 731 2051 HOH HOH A . D 4 HOH 232 732 2193 HOH HOH A . D 4 HOH 233 733 2153 HOH HOH A . D 4 HOH 234 734 2246 HOH HOH A . D 4 HOH 235 735 2014 HOH HOH A . D 4 HOH 236 736 2139 HOH HOH A . D 4 HOH 237 737 2047 HOH HOH A . D 4 HOH 238 738 2162 HOH HOH A . D 4 HOH 239 739 2002 HOH HOH A . D 4 HOH 240 740 2206 HOH HOH A . D 4 HOH 241 741 2077 HOH HOH A . D 4 HOH 242 742 2092 HOH HOH A . D 4 HOH 243 743 2061 HOH HOH A . D 4 HOH 244 744 2011 HOH HOH A . D 4 HOH 245 745 2070 HOH HOH A . D 4 HOH 246 746 2034 HOH HOH A . D 4 HOH 247 747 2030 HOH HOH A . D 4 HOH 248 748 2065 HOH HOH A . D 4 HOH 249 749 2064 HOH HOH A . D 4 HOH 250 750 2054 HOH HOH A . D 4 HOH 251 751 2094 HOH HOH A . D 4 HOH 252 752 2021 HOH HOH A . D 4 HOH 253 753 2007 HOH HOH A . D 4 HOH 254 754 2076 HOH HOH A . D 4 HOH 255 755 2053 HOH HOH A . D 4 HOH 256 756 2082 HOH HOH A . D 4 HOH 257 757 2050 HOH HOH A . D 4 HOH 258 758 2001 HOH HOH A . D 4 HOH 259 759 2063 HOH HOH A . D 4 HOH 260 760 2019 HOH HOH A . D 4 HOH 261 761 2015 HOH HOH A . D 4 HOH 262 762 2079 HOH HOH A . D 4 HOH 263 763 2023 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 43 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 43 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-26 2 'Structure model' 1 1 2011-09-21 3 'Structure model' 1 2 2017-07-12 4 'Structure model' 1 3 2019-05-08 5 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Non-polymer description' 4 2 'Structure model' 'Refinement description' 5 2 'Structure model' 'Version format compliance' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Experimental preparation' 10 5 'Structure model' 'Atomic model' 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Derived calculations' 13 5 'Structure model' Other 14 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 3 'Structure model' struct_conn 3 4 'Structure model' database_PDB_rev 4 4 'Structure model' database_PDB_rev_record 5 4 'Structure model' exptl_crystal_grow 6 5 'Structure model' atom_site 7 5 'Structure model' chem_comp 8 5 'Structure model' entity 9 5 'Structure model' pdbx_branch_scheme 10 5 'Structure model' pdbx_chem_comp_identifier 11 5 'Structure model' pdbx_database_status 12 5 'Structure model' pdbx_entity_branch 13 5 'Structure model' pdbx_entity_branch_descriptor 14 5 'Structure model' pdbx_entity_branch_link 15 5 'Structure model' pdbx_entity_branch_list 16 5 'Structure model' pdbx_entity_nonpoly 17 5 'Structure model' pdbx_nonpoly_scheme 18 5 'Structure model' pdbx_struct_assembly_gen 19 5 'Structure model' struct_asym 20 5 'Structure model' struct_conn 21 5 'Structure model' struct_site 22 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 3 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 4 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 5 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 6 4 'Structure model' '_exptl_crystal_grow.method' 7 5 'Structure model' '_atom_site.auth_asym_id' 8 5 'Structure model' '_atom_site.auth_seq_id' 9 5 'Structure model' '_atom_site.label_asym_id' 10 5 'Structure model' '_atom_site.label_entity_id' 11 5 'Structure model' '_chem_comp.name' 12 5 'Structure model' '_chem_comp.type' 13 5 'Structure model' '_pdbx_database_status.status_code_sf' 14 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 15 5 'Structure model' '_struct_conn.pdbx_role' 16 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 17 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 18 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 20 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 21 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 22 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 REFMAC phasing . ? 4 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. SECONDARY STRUCTURE ASSIGNED BY DSSP DSSP OUTPUT CONVERTED BY DSSP2PDB VERSION 0.03 ; 700 ; SHEET DETERMINATION METHOD: AUTHOR PROVIDED. THE FOLLOWING SHEET RECORDS FOR MODEL `1` CHAIN ID `A` HAVE BEEN DETERMINED BY BETA-SPIDER, VERSION ALPHA 2.0 WITH AN ENERGY THRESHOLD OF -8.2 KCAL/MOL USING COULOMB ELECTROSTATICS USING 12-6 L-J VAN DER WAALS USING BETA-SPIDER RULE SETS. ; # _pdbx_entry_details.entry_id 2WNE _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, GLU 135 TO SER' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;ALFA-LAMINARIHEPTAOSYL FLUORIDE (A401-A407): BETA-1-3-LINKED GLUCAN WITH AN ALPHA-FLUORIDE FOUND IN LAMINARIA DIGITATA. BETA-D-MANNOSE (BMA): PART OF N-GLYCOSYLATION ALPHA-GLYCOSYL-FLUORIDE (GLF): A402 HAS BETA-1,3 GLYCOSIDIC BOND TO THIS RESIDUE IN THE -1 SUBSITE. ALPHA-D-MANNOSE (MAN): PART OF N-GLYCOSYLATION BETA-D-GLUCOSE (BGC): BETA-1,3-GLUCAN IN THE ACTIVE SITE, WITH A407 AT +1 SUBSITE, A406 AT +2 AND A403 AT -3 AND A402 AT -2. B402 IS LINKED TO GLF WITH A BETA-1-3-GLYCOSIDIC BOND. N-ACETYL-D-GLUCOSAMINE (NAG): PART OF N-GLYCOSYLATION ; _pdbx_entry_details.sequence_details ;POINT MUTATION OF NUCLEOPHILE RESIDUE GLUTAMATE 115 TO SERINE (THIS IS A E115S MUTANT) ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 81 ? ? -112.56 -93.15 2 1 THR A 151 ? ? -108.14 -85.14 3 1 ASP A 243 ? ? -108.35 -156.33 4 1 CYS A 254 ? ? 49.92 -129.55 5 1 TRP A 257 ? ? -104.61 -69.64 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GLC 1 B GLC 1 A GLC 401 n B 2 BGC 2 B BGC 2 A BGC 402 n B 2 BGC 3 B BGC 3 A BGC 403 n B 2 BGC 4 B BGC 4 A BGC 404 n B 2 BGC 5 B BGC 5 A BGC 405 n B 2 BGC 6 B BGC 6 A BGC 406 n B 2 BGC 7 B BGC 7 A BGC 407 n C 3 NAG 1 C NAG 1 A NAG 1299 n C 3 NAG 2 C NAG 2 A NAG 1300 n C 3 BMA 3 C BMA 3 A BMA 1301 n C 3 MAN 4 C MAN 4 A MAN 1302 n C 3 MAN 5 C MAN 5 A MAN 1303 n C 3 MAN 6 C MAN 6 A MAN 1304 n C 3 MAN 7 C MAN 7 A MAN 1305 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpb1-3DGlcpb1-3DGlcpb1-3DGlcpb1-3DGlcpb1-3DGlcpb1-3DGlcpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,7,6/[a2122h-1a_1-5][a2122h-1b_1-5]/1-2-2-2-2-2-2/a3-b1_b3-c1_c3-d1_d3-e1_e3-f1_f3-g1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-Glcp]{[(3+1)][b-D-Glcp]{[(3+1)][b-D-Glcp]{[(3+1)][b-D-Glcp]{[(3+1)][b-D-Glcp]{[(3+1)][b-D-Glcp]{[(3+1)][b-D-Glcp]{}}}}}}}' LINUCS PDB-CARE ? 4 3 'DManpa1-2DManpa1-6[DManpa1-3]DManpa1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3-3/a4-b1_b4-c1_c6-d1_d3-e1_d6-f1_f2-g1' WURCS PDB2Glycan 1.1.0 6 3 ;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][a-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{[(2+1)][a-D-Manp]{}}}}}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 BGC C1 O1 1 GLC O3 HO3 sing ? 2 2 3 BGC C1 O1 2 BGC O3 HO3 sing ? 3 2 4 BGC C1 O1 3 BGC O3 HO3 sing ? 4 2 5 BGC C1 O1 4 BGC O3 HO3 sing ? 5 2 6 BGC C1 O1 5 BGC O3 HO3 sing ? 6 2 7 BGC C1 O1 6 BGC O3 HO3 sing ? 7 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 8 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 9 3 4 MAN C1 O1 3 BMA O6 HO6 sing ? 10 3 5 MAN C1 O1 4 MAN O6 HO6 sing ? 11 3 6 MAN C1 O1 5 MAN O2 HO2 sing ? 12 3 7 MAN C1 O1 4 MAN O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 BGC 2 n 2 BGC 3 n 2 BGC 4 n 2 BGC 5 n 2 BGC 6 n 2 BGC 7 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 MAN 5 n 3 MAN 6 n 3 MAN 7 n # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #