HEADER HYDROLASE 03-AUG-09 2WP8 TITLE YEAST RRP44 NUCLEASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXOSOME COMPLEX COMPONENT RRP45; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXOSOME NON-CATALYTIC CORE COMPONENT RRP45, RIBOSOMAL RNA- COMPND 5 PROCESSING PROTEIN 45; COMPND 6 EC: 3.1.13.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: EXOSOME COMPLEX COMPONENT SKI6; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: EXOSOME NON-CATALYTIC CORE COMPONENT RRP41, SUPERKILLER COMPND 12 PROTEIN 6, RIBOSOMAL RNA-PROCESSING PROTEIN 41, EXTRACELLULAR MUTANT COMPND 13 PROTEIN 20; COMPND 14 EC: 3.1.13.-; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: EXOSOME COMPLEX EXONUCLEASE DIS3; COMPND 18 CHAIN: J; COMPND 19 FRAGMENT: RESIDUES 25-1001; COMPND 20 SYNONYM: EXOSOME CORE COMPLEX CATALYTIC SUBUNIT RRP44, CHROMOSOME COMPND 21 DISJUNCTION PROTEIN 3, RIBOSOMAL RNA-PROCESSING PROTEIN 44; COMPND 22 EC: 3.1.13.-; COMPND 23 ENGINEERED: YES; COMPND 24 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM-11; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 11 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 12 ORGANISM_TAXID: 4932; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PETMCN; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 19 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 20 ORGANISM_TAXID: 4932; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 23 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 24 EXPRESSION_SYSTEM_PLASMID: PETMCN KEYWDS EXOSOME, NUCLEUS, NUCLEASE, HYDROLASE, RNA-BINDING, EXONUCLEASE, RNA KEYWDS 2 BINDING, MITOCHONDRION, RRNA PROCESSING EXPDTA X-RAY DIFFRACTION AUTHOR J.BASQUIN,F.BONNEAU,J.EBERT,E.LORENTZEN,E.CONTI REVDAT 5 06-NOV-24 2WP8 1 REMARK REVDAT 4 20-DEC-23 2WP8 1 REMARK REVDAT 3 30-MAY-12 2WP8 1 JRNL REMARK HETSYN REVDAT 2 13-JUL-11 2WP8 1 VERSN REVDAT 1 10-NOV-09 2WP8 0 JRNL AUTH F.BONNEAU,J.BASQUIN,J.EBERT,E.LORENTZEN,E.CONTI JRNL TITL THE YEAST EXOSOME FUNCTIONS AS A MACROMOLECULAR CAGE TO JRNL TITL 2 CHANNEL RNA SUBSTRATES FOR DEGRADATION. JRNL REF CELL(CAMBRIDGE,MASS.) V. 139 547 2009 JRNL REFN ISSN 0092-8674 JRNL PMID 19879841 JRNL DOI 10.1016/J.CELL.2009.08.042 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 38325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1185 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2740 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10809 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 0.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.000 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.439 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.345 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 40.476 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.919 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.848 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10987 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 7310 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 14916 ; 1.508 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17869 ; 0.936 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1384 ; 7.388 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 490 ;36.758 ;24.286 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1857 ;18.127 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 74 ;17.870 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1740 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12218 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2143 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6963 ; 0.486 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2788 ; 0.074 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11237 ; 0.938 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4024 ; 1.365 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3679 ; 2.364 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 37 J 198 REMARK 3 ORIGIN FOR THE GROUP (A): -30.9840 -59.7730 77.1080 REMARK 3 T TENSOR REMARK 3 T11: 0.1233 T22: 0.1680 REMARK 3 T33: 0.0824 T12: -0.0085 REMARK 3 T13: -0.0463 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 3.9717 L22: 3.2194 REMARK 3 L33: 3.1697 L12: 1.1492 REMARK 3 L13: 1.3124 L23: -0.3082 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: -0.5348 S13: -0.1308 REMARK 3 S21: 0.4555 S22: -0.0746 S23: -0.2621 REMARK 3 S31: -0.1910 S32: 0.2229 S33: 0.0603 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 303 REMARK 3 ORIGIN FOR THE GROUP (A): -57.8810 -52.2490 31.7580 REMARK 3 T TENSOR REMARK 3 T11: 0.1000 T22: 0.1339 REMARK 3 T33: 0.0814 T12: -0.0151 REMARK 3 T13: -0.0095 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.5630 L22: 0.8946 REMARK 3 L33: 0.5409 L12: 0.6681 REMARK 3 L13: 0.2417 L23: 0.1434 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: -0.0007 S13: 0.1352 REMARK 3 S21: -0.0014 S22: -0.0071 S23: 0.0393 REMARK 3 S31: -0.0921 S32: 0.0389 S33: 0.0032 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 238 REMARK 3 ORIGIN FOR THE GROUP (A): -67.5950 -60.3410 60.6080 REMARK 3 T TENSOR REMARK 3 T11: 0.0104 T22: 0.0155 REMARK 3 T33: 0.0812 T12: 0.0109 REMARK 3 T13: -0.0122 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 6.2305 L22: 1.2894 REMARK 3 L33: 1.0883 L12: -0.1968 REMARK 3 L13: -0.6681 L23: 0.1593 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: 0.0682 S13: -0.1631 REMARK 3 S21: -0.0503 S22: -0.0153 S23: 0.3192 REMARK 3 S31: -0.0904 S32: -0.1296 S33: 0.0594 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1240 B 1240 REMARK 3 ORIGIN FOR THE GROUP (A): -11.4380 -26.7940 58.6080 REMARK 3 T TENSOR REMARK 3 T11: 0.2331 T22: 0.1260 REMARK 3 T33: 0.1818 T12: 0.1714 REMARK 3 T13: 0.1109 T23: 0.0810 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0000 REMARK 3 L13: 0.0000 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0000 S12: 0.0000 S13: 0.0000 REMARK 3 S21: 0.0000 S22: 0.0000 S23: 0.0000 REMARK 3 S31: 0.0000 S32: 0.0000 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 253 J 475 REMARK 3 ORIGIN FOR THE GROUP (A): -25.3550 -30.0170 53.2990 REMARK 3 T TENSOR REMARK 3 T11: 0.0539 T22: 0.0138 REMARK 3 T33: 0.0170 T12: -0.0039 REMARK 3 T13: -0.0294 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.2773 L22: 2.6505 REMARK 3 L33: 0.9766 L12: 0.7855 REMARK 3 L13: 0.1888 L23: 0.3603 REMARK 3 S TENSOR REMARK 3 S11: 0.1064 S12: -0.1545 S13: -0.0450 REMARK 3 S21: 0.3233 S22: -0.0329 S23: -0.1959 REMARK 3 S31: 0.1515 S32: 0.0159 S33: -0.0736 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 476 J 910 REMARK 3 ORIGIN FOR THE GROUP (A): -9.5910 -30.8850 18.2570 REMARK 3 T TENSOR REMARK 3 T11: 0.0931 T22: 0.0644 REMARK 3 T33: 0.1501 T12: -0.0212 REMARK 3 T13: 0.0269 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 1.0142 L22: 0.9229 REMARK 3 L33: 1.6142 L12: 0.1094 REMARK 3 L13: -0.2146 L23: 0.2817 REMARK 3 S TENSOR REMARK 3 S11: 0.0136 S12: 0.0376 S13: 0.0085 REMARK 3 S21: -0.0593 S22: 0.0630 S23: -0.2274 REMARK 3 S31: -0.0593 S32: 0.1089 S33: -0.0765 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : J 911 J 1001 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6180 -46.0890 53.2710 REMARK 3 T TENSOR REMARK 3 T11: 0.2784 T22: 0.2201 REMARK 3 T33: 0.3200 T12: 0.1172 REMARK 3 T13: -0.0859 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 3.4134 L22: 2.1990 REMARK 3 L33: 6.3322 L12: 0.2780 REMARK 3 L13: 1.2037 L23: -0.2361 REMARK 3 S TENSOR REMARK 3 S11: 0.0652 S12: -0.3193 S13: -0.3784 REMARK 3 S21: 0.2456 S22: -0.0288 S23: -0.1126 REMARK 3 S31: 0.8046 S32: 0.3080 S33: -0.0363 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WP8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1290040635. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39670 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.01000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.05000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2NN6, 2VNU REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7.5 % (W/V) OF PEG 20.000, 50 MM TRIS REMARK 280 PH 8.0 AND 10% (W/V) GLYCEROL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 55.45000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.70000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.84000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.70000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 55.45000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.84000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 59520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN J, ASP 551 TO ASN REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 ASP A 4 REMARK 465 ILE A 5 REMARK 465 GLU A 6 REMARK 465 PRO A 85 REMARK 465 MET A 86 REMARK 465 ALA A 87 REMARK 465 GLY A 88 REMARK 465 SER A 89 REMARK 465 GLN A 90 REMARK 465 PHE A 91 REMARK 465 GLU A 92 REMARK 465 ASN A 93 REMARK 465 GLY A 94 REMARK 465 ASN A 95 REMARK 465 ILE A 96 REMARK 465 THR A 97 REMARK 465 GLY A 98 REMARK 465 GLU A 99 REMARK 465 ASP A 100 REMARK 465 GLU A 101 REMARK 465 VAL A 102 REMARK 465 LEU A 103 REMARK 465 CYS A 104 REMARK 465 SER A 105 REMARK 465 ARG A 106 REMARK 465 PRO A 203 REMARK 465 GLN A 204 REMARK 465 ASP A 205 REMARK 465 THR A 206 REMARK 465 GLU A 207 REMARK 465 GLU A 208 REMARK 465 ASN A 209 REMARK 465 ILE A 210 REMARK 465 LYS A 211 REMARK 465 GLY A 212 REMARK 465 GLU A 213 REMARK 465 THR A 214 REMARK 465 ASN A 215 REMARK 465 SER A 216 REMARK 465 GLU A 217 REMARK 465 GLU A 304 REMARK 465 ILE A 305 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 PRO B 59 REMARK 465 ARG B 60 REMARK 465 LEU B 61 REMARK 465 LYS B 62 REMARK 465 SER B 63 REMARK 465 GLN B 64 REMARK 465 LYS B 80 REMARK 465 PHE B 81 REMARK 465 SER B 82 REMARK 465 LYS B 83 REMARK 465 PHE B 84 REMARK 465 GLU B 85 REMARK 465 ARG B 86 REMARK 465 SER B 87 REMARK 465 LYS B 88 REMARK 465 SER B 89 REMARK 465 SER B 90 REMARK 465 HIS B 91 REMARK 465 LYS B 92 REMARK 465 ASN B 93 REMARK 465 VAL B 240 REMARK 465 SER B 241 REMARK 465 ASN B 242 REMARK 465 ALA B 243 REMARK 465 SER B 244 REMARK 465 ALA B 245 REMARK 465 ARG B 246 REMARK 465 VAL J 25 REMARK 465 ARG J 26 REMARK 465 SER J 27 REMARK 465 ARG J 28 REMARK 465 ASN J 29 REMARK 465 GLY J 30 REMARK 465 GLY J 31 REMARK 465 ALA J 32 REMARK 465 THR J 33 REMARK 465 LYS J 34 REMARK 465 ILE J 35 REMARK 465 ARG J 160 REMARK 465 LEU J 161 REMARK 465 PRO J 162 REMARK 465 ASN J 163 REMARK 465 GLU J 164 REMARK 465 THR J 165 REMARK 465 ILE J 166 REMARK 465 ARG J 199 REMARK 465 LEU J 200 REMARK 465 ASN J 201 REMARK 465 ARG J 202 REMARK 465 GLU J 203 REMARK 465 ALA J 204 REMARK 465 ALA J 205 REMARK 465 THR J 206 REMARK 465 LYS J 207 REMARK 465 GLU J 208 REMARK 465 VAL J 209 REMARK 465 ILE J 235 REMARK 465 PRO J 236 REMARK 465 GLN J 237 REMARK 465 MET J 238 REMARK 465 ASP J 239 REMARK 465 SER J 240 REMARK 465 PHE J 241 REMARK 465 ASP J 242 REMARK 465 LYS J 243 REMARK 465 ASP J 244 REMARK 465 LEU J 245 REMARK 465 GLU J 246 REMARK 465 ARG J 247 REMARK 465 ASP J 248 REMARK 465 THR J 249 REMARK 465 PHE J 250 REMARK 465 SER J 251 REMARK 465 ASP J 252 REMARK 465 ALA J 349 REMARK 465 GLY J 350 REMARK 465 ASP J 351 REMARK 465 ASP J 352 REMARK 465 ASP J 353 REMARK 465 ASP J 354 REMARK 465 ASN J 355 REMARK 465 ASN J 356 REMARK 465 GLU J 357 REMARK 465 SER J 358 REMARK 465 SER J 359 REMARK 465 SER J 360 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 LYS A 42 CG CD CE NZ REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 GLN A 66 C CB CG CD OE1 NE2 REMARK 470 GLU A 69 CG CD OE1 OE2 REMARK 470 ILE A 83 CG1 CG2 CD1 REMARK 470 SER A 84 OG REMARK 470 ILE A 107 CG1 CG2 CD1 REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 LYS A 110 CG CD CE NZ REMARK 470 ARG A 113 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 114 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 ILE A 148 CD1 REMARK 470 THR A 168 OG1 CG2 REMARK 470 HIS A 170 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 172 CB CG CD OE1 OE2 REMARK 470 HIS A 191 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 202 CG OD1 ND2 REMARK 470 GLN A 247 CD OE1 NE2 REMARK 470 LEU A 261 CG CD1 CD2 REMARK 470 LYS A 284 CE NZ REMARK 470 LYS A 292 CG CD CE NZ REMARK 470 SER B 68 OG REMARK 470 VAL B 74 CG1 CG2 REMARK 470 SER B 75 OG REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 ARG B 95 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 96 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 98 CG CD1 CD2 REMARK 470 LYS B 110 CG CD CE NZ REMARK 470 ILE B 116 CG1 CG2 CD1 REMARK 470 ARG B 119 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 135 CD1 REMARK 470 ILE B 148 CD1 REMARK 470 LYS B 192 CG CD CE NZ REMARK 470 LYS B 195 CG CD CE NZ REMARK 470 SER B 197 OG REMARK 470 ARG B 239 CG CD NE CZ NH1 NH2 REMARK 470 VAL J 36 CG1 CG2 REMARK 470 SER J 43 OG REMARK 470 CYS J 47 SG REMARK 470 SER J 49 OG REMARK 470 ARG J 50 CG CD NE CZ NH1 NH2 REMARK 470 ILE J 58 CG1 CG2 CD1 REMARK 470 LYS J 69 CG CD CE NZ REMARK 470 GLN J 97 CG CD OE1 NE2 REMARK 470 GLU J 120 CG CD OE1 OE2 REMARK 470 LYS J 124 CG CD CE NZ REMARK 470 GLU J 159 CG CD OE1 OE2 REMARK 470 LYS J 176 CD CE NZ REMARK 470 GLU J 183 CG CD OE1 OE2 REMARK 470 ASP J 198 CG OD1 OD2 REMARK 470 GLU J 210 CG CD OE1 OE2 REMARK 470 SER J 211 OG REMARK 470 ARG J 232 CG CD NE CZ NH1 NH2 REMARK 470 SER J 324 OG REMARK 470 GLU J 348 CG CD OE1 OE2 REMARK 470 ASN J 361 CG OD1 ND2 REMARK 470 ARG J 370 CG CD NE CZ NH1 NH2 REMARK 470 ARG J 371 CG CD NE CZ NH1 NH2 REMARK 470 LYS J 385 CG CD CE NZ REMARK 470 GLN J 415 CG CD OE1 NE2 REMARK 470 SER J 417 OG REMARK 470 SER J 523 OG REMARK 470 LYS J 524 CG CD CE NZ REMARK 470 LYS J 532 CG CD CE NZ REMARK 470 VAL J 548 CG1 CG2 REMARK 470 LYS J 702 CG CD CE NZ REMARK 470 SER J 710 OG REMARK 470 LYS J 718 CG CD CE NZ REMARK 470 LYS J 719 CG CD CE NZ REMARK 470 GLU J 797 CG CD OE1 OE2 REMARK 470 MET J 879 CG SD CE REMARK 470 SER J 912 OG REMARK 470 ASN J 966 CG OD1 ND2 REMARK 470 ARG J 984 CG CD NE CZ NH1 NH2 REMARK 470 LYS J 995 CG CD CE NZ REMARK 470 LYS J1001 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO J 82 N ILE J 83 1.48 REMARK 500 O GLN A 66 N PRO A 67 1.76 REMARK 500 OE1 GLN J 406 NZ LYS J 993 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS J 52 CB CYS J 52 SG 0.129 REMARK 500 CYS J 55 CB CYS J 55 SG 0.120 REMARK 500 PRO J 82 C ILE J 83 N -0.358 REMARK 500 CYS J 430 CB CYS J 430 SG -0.130 REMARK 500 CYS J 502 CB CYS J 502 SG -0.103 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 178 C - N - CD ANGL. DEV. = -19.3 DEGREES REMARK 500 ARG B 18 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 CYS J 55 CA - CB - SG ANGL. DEV. = 7.8 DEGREES REMARK 500 PRO J 82 CA - C - N ANGL. DEV. = 38.4 DEGREES REMARK 500 PRO J 82 O - C - N ANGL. DEV. = -38.2 DEGREES REMARK 500 ILE J 83 C - N - CA ANGL. DEV. = 31.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 22 84.60 -155.91 REMARK 500 GLU A 82 85.88 -161.57 REMARK 500 GLU A 109 -74.96 -43.55 REMARK 500 LYS A 110 -76.83 -51.66 REMARK 500 SER A 111 -86.32 -9.97 REMARK 500 ILE A 125 -61.20 -108.96 REMARK 500 SER A 129 -30.39 -132.72 REMARK 500 GLU A 172 -67.12 66.49 REMARK 500 HIS A 177 114.63 -170.27 REMARK 500 VAL A 179 -61.70 -163.77 REMARK 500 ARG A 243 7.34 86.44 REMARK 500 GLN A 247 144.84 -173.75 REMARK 500 ASP B 132 56.39 -153.63 REMARK 500 ASP B 167 -113.21 48.63 REMARK 500 ASP B 173 89.60 -157.30 REMARK 500 LYS B 234 -70.18 -50.79 REMARK 500 CYS J 47 -62.47 -20.17 REMARK 500 LEU J 48 5.72 85.21 REMARK 500 PRO J 56 2.21 -61.56 REMARK 500 ILE J 83 -63.69 -149.63 REMARK 500 CYS J 107 -49.62 -143.85 REMARK 500 SER J 125 110.37 -160.54 REMARK 500 ASP J 168 75.29 -103.27 REMARK 500 ARG J 169 -36.18 -35.26 REMARK 500 LYS J 186 -54.97 -27.80 REMARK 500 ASN J 197 -46.60 -135.92 REMARK 500 ASN J 212 2.36 47.66 REMARK 500 ASN J 227 39.48 -85.94 REMARK 500 ASN J 308 61.34 37.64 REMARK 500 ILE J 347 -103.01 -133.21 REMARK 500 LYS J 385 61.17 61.48 REMARK 500 ALA J 477 -56.94 79.62 REMARK 500 ASP J 525 99.49 -160.25 REMARK 500 ASP J 611 -86.11 -95.44 REMARK 500 SER J 710 32.01 79.67 REMARK 500 THR J 749 34.51 -143.06 REMARK 500 ASN J 775 54.41 37.08 REMARK 500 ARG J 830 129.08 -30.82 REMARK 500 PHE J 842 -30.72 -137.35 REMARK 500 SER J 844 57.43 -144.28 REMARK 500 SER J 992 -7.11 -58.58 REMARK 500 ARG J 994 74.43 -115.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 21 ASN A 22 39.92 REMARK 500 PRO A 178 VAL A 179 -32.48 REMARK 500 GLY A 252 GLY A 253 -38.78 REMARK 500 PRO J 82 ILE J 83 -103.02 REMARK 500 ASP J 168 ARG J 169 149.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO J 82 -17.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1240 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL J 2002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VNU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SC RRP44 DBREF 2WP8 A 1 305 UNP Q05636 RRP45_YEAST 1 305 DBREF 2WP8 B 1 246 UNP P46948 RRP41_YEAST 1 246 DBREF 2WP8 J 25 1001 UNP Q08162 RRP44_YEAST 25 1001 SEQADV 2WP8 ASN B 79 UNP P46948 THR 79 CONFLICT SEQADV 2WP8 ASN J 551 UNP Q08162 ASP 551 ENGINEERED MUTATION SEQRES 1 A 305 MET ALA LYS ASP ILE GLU ILE SER ALA SER GLU SER LYS SEQRES 2 A 305 PHE ILE LEU GLU ALA LEU ARG GLN ASN TYR ARG LEU ASP SEQRES 3 A 305 GLY ARG SER PHE ASP GLN PHE ARG ASP VAL GLU ILE THR SEQRES 4 A 305 PHE GLY LYS GLU PHE GLY ASP VAL SER VAL LYS MET GLY SEQRES 5 A 305 ASN THR LYS VAL HIS CYS ARG ILE SER CYS GLN ILE ALA SEQRES 6 A 305 GLN PRO TYR GLU ASP ARG PRO PHE GLU GLY LEU PHE VAL SEQRES 7 A 305 ILE SER THR GLU ILE SER PRO MET ALA GLY SER GLN PHE SEQRES 8 A 305 GLU ASN GLY ASN ILE THR GLY GLU ASP GLU VAL LEU CYS SEQRES 9 A 305 SER ARG ILE ILE GLU LYS SER VAL ARG ARG SER GLY ALA SEQRES 10 A 305 LEU ASP VAL GLU GLY LEU CYS ILE VAL ALA GLY SER LYS SEQRES 11 A 305 CYS TRP ALA VAL ARG ALA ASP VAL HIS PHE LEU ASP CYS SEQRES 12 A 305 ASP GLY GLY PHE ILE ASP ALA SER CYS ILE ALA VAL MET SEQRES 13 A 305 ALA GLY LEU MET HIS PHE LYS LYS PRO ASP ILE THR VAL SEQRES 14 A 305 HIS GLY GLU GLN ILE ILE VAL HIS PRO VAL ASN GLU ARG SEQRES 15 A 305 GLU PRO VAL PRO LEU GLY ILE LEU HIS ILE PRO ILE CYS SEQRES 16 A 305 VAL THR PHE SER PHE PHE ASN PRO GLN ASP THR GLU GLU SEQRES 17 A 305 ASN ILE LYS GLY GLU THR ASN SER GLU ILE SER ILE ILE SEQRES 18 A 305 ASP ALA THR LEU LYS GLU GLU LEU LEU ARG ASP GLY VAL SEQRES 19 A 305 LEU THR VAL THR LEU ASN LYS ASN ARG GLU VAL VAL GLN SEQRES 20 A 305 VAL SER LYS ALA GLY GLY LEU PRO MET ASP ALA LEU THR SEQRES 21 A 305 LEU MET LYS CYS CYS HIS GLU ALA TYR SER ILE ILE GLU SEQRES 22 A 305 LYS ILE THR ASP GLN ILE LEU GLN LEU LEU LYS GLU ASP SEQRES 23 A 305 SER GLU LYS ARG ASN LYS TYR ALA ALA MET LEU THR SER SEQRES 24 A 305 GLU ASN ALA ARG GLU ILE SEQRES 1 B 246 MET SER ARG LEU GLU ILE TYR SER PRO GLU GLY LEU ARG SEQRES 2 B 246 LEU ASP GLY ARG ARG TRP ASN GLU LEU ARG ARG PHE GLU SEQRES 3 B 246 SER SER ILE ASN THR HIS PRO HIS ALA ALA ASP GLY SER SEQRES 4 B 246 SER TYR MET GLU GLN GLY ASN ASN LYS ILE ILE THR LEU SEQRES 5 B 246 VAL LYS GLY PRO LYS GLU PRO ARG LEU LYS SER GLN MET SEQRES 6 B 246 ASP THR SER LYS ALA LEU LEU ASN VAL SER VAL ASN ILE SEQRES 7 B 246 ASN LYS PHE SER LYS PHE GLU ARG SER LYS SER SER HIS SEQRES 8 B 246 LYS ASN GLU ARG ARG VAL LEU GLU ILE GLN THR SER LEU SEQRES 9 B 246 VAL ARG MET PHE GLU LYS ASN VAL MET LEU ASN ILE TYR SEQRES 10 B 246 PRO ARG THR VAL ILE ASP ILE GLU ILE HIS VAL LEU GLU SEQRES 11 B 246 GLN ASP GLY GLY ILE MET GLY SER LEU ILE ASN GLY ILE SEQRES 12 B 246 THR LEU ALA LEU ILE ASP ALA GLY ILE SER MET PHE ASP SEQRES 13 B 246 TYR ILE SER GLY ILE SER VAL GLY LEU TYR ASP THR THR SEQRES 14 B 246 PRO LEU LEU ASP THR ASN SER LEU GLU GLU ASN ALA MET SEQRES 15 B 246 SER THR VAL THR LEU GLY VAL VAL GLY LYS SER GLU LYS SEQRES 16 B 246 LEU SER LEU LEU LEU VAL GLU ASP LYS ILE PRO LEU ASP SEQRES 17 B 246 ARG LEU GLU ASN VAL LEU ALA ILE GLY ILE ALA GLY ALA SEQRES 18 B 246 HIS ARG VAL ARG ASP LEU MET ASP GLU GLU LEU ARG LYS SEQRES 19 B 246 HIS ALA GLN LYS ARG VAL SER ASN ALA SER ALA ARG SEQRES 1 J 977 VAL ARG SER ARG ASN GLY GLY ALA THR LYS ILE VAL ARG SEQRES 2 J 977 GLU HIS TYR LEU ARG SER ASP ILE PRO CYS LEU SER ARG SEQRES 3 J 977 SER CYS THR LYS CYS PRO GLN ILE VAL VAL PRO ASP ALA SEQRES 4 J 977 GLN ASN GLU LEU PRO LYS PHE ILE LEU SER ASP SER PRO SEQRES 5 J 977 LEU GLU LEU SER ALA PRO ILE GLY LYS HIS TYR VAL VAL SEQRES 6 J 977 LEU ASP THR ASN VAL VAL LEU GLN ALA ILE ASP LEU LEU SEQRES 7 J 977 GLU ASN PRO ASN CYS PHE PHE ASP VAL ILE VAL PRO GLN SEQRES 8 J 977 ILE VAL LEU ASP GLU VAL ARG ASN LYS SER TYR PRO VAL SEQRES 9 J 977 TYR THR ARG LEU ARG THR LEU CYS ARG ASP SER ASP ASP SEQRES 10 J 977 HIS LYS ARG PHE ILE VAL PHE HIS ASN GLU PHE SER GLU SEQRES 11 J 977 HIS THR PHE VAL GLU ARG LEU PRO ASN GLU THR ILE ASN SEQRES 12 J 977 ASP ARG ASN ASP ARG ALA ILE ARG LYS THR CYS GLN TRP SEQRES 13 J 977 TYR SER GLU HIS LEU LYS PRO TYR ASP ILE ASN VAL VAL SEQRES 14 J 977 LEU VAL THR ASN ASP ARG LEU ASN ARG GLU ALA ALA THR SEQRES 15 J 977 LYS GLU VAL GLU SER ASN ILE ILE THR LYS SER LEU VAL SEQRES 16 J 977 GLN TYR ILE GLU LEU LEU PRO ASN ALA ASP ASP ILE ARG SEQRES 17 J 977 ASP SER ILE PRO GLN MET ASP SER PHE ASP LYS ASP LEU SEQRES 18 J 977 GLU ARG ASP THR PHE SER ASP PHE THR PHE PRO GLU TYR SEQRES 19 J 977 TYR SER THR ALA ARG VAL MET GLY GLY LEU LYS ASN GLY SEQRES 20 J 977 VAL LEU TYR GLN GLY ASN ILE GLN ILE SER GLU TYR ASN SEQRES 21 J 977 PHE LEU GLU GLY SER VAL SER LEU PRO ARG PHE SER LYS SEQRES 22 J 977 PRO VAL LEU ILE VAL GLY GLN LYS ASN LEU ASN ARG ALA SEQRES 23 J 977 PHE ASN GLY ASP GLN VAL ILE VAL GLU LEU LEU PRO GLN SEQRES 24 J 977 SER GLU TRP LYS ALA PRO SER SER ILE VAL LEU ASP SER SEQRES 25 J 977 GLU HIS PHE ASP VAL ASN ASP ASN PRO ASP ILE GLU ALA SEQRES 26 J 977 GLY ASP ASP ASP ASP ASN ASN GLU SER SER SER ASN THR SEQRES 27 J 977 THR VAL ILE SER ASP LYS GLN ARG ARG LEU LEU ALA LYS SEQRES 28 J 977 ASP ALA MET ILE ALA GLN ARG SER LYS LYS ILE GLN PRO SEQRES 29 J 977 THR ALA LYS VAL VAL TYR ILE GLN ARG ARG SER TRP ARG SEQRES 30 J 977 GLN TYR VAL GLY GLN LEU ALA PRO SER SER VAL ASP PRO SEQRES 31 J 977 GLN SER SER SER THR GLN ASN VAL PHE VAL ILE LEU MET SEQRES 32 J 977 ASP LYS CYS LEU PRO LYS VAL ARG ILE ARG THR ARG ARG SEQRES 33 J 977 ALA ALA GLU LEU LEU ASP LYS ARG ILE VAL ILE SER ILE SEQRES 34 J 977 ASP SER TRP PRO THR THR HIS LYS TYR PRO LEU GLY HIS SEQRES 35 J 977 PHE VAL ARG ASP LEU GLY THR ILE GLU SER ALA GLN ALA SEQRES 36 J 977 GLU THR GLU ALA LEU LEU LEU GLU HIS ASP VAL GLU TYR SEQRES 37 J 977 ARG PRO PHE SER LYS LYS VAL LEU GLU CYS LEU PRO ALA SEQRES 38 J 977 GLU GLY HIS ASP TRP LYS ALA PRO THR LYS LEU ASP ASP SEQRES 39 J 977 PRO GLU ALA VAL SER LYS ASP PRO LEU LEU THR LYS ARG SEQRES 40 J 977 LYS ASP LEU ARG ASP LYS LEU ILE CYS SER ILE ASP PRO SEQRES 41 J 977 PRO GLY CYS VAL ASP ILE ASN ASP ALA LEU HIS ALA LYS SEQRES 42 J 977 LYS LEU PRO ASN GLY ASN TRP GLU VAL GLY VAL HIS ILE SEQRES 43 J 977 ALA ASP VAL THR HIS PHE VAL LYS PRO GLY THR ALA LEU SEQRES 44 J 977 ASP ALA GLU GLY ALA ALA ARG GLY THR SER VAL TYR LEU SEQRES 45 J 977 VAL ASP LYS ARG ILE ASP MET LEU PRO MET LEU LEU GLY SEQRES 46 J 977 THR ASP LEU CYS SER LEU LYS PRO TYR VAL ASP ARG PHE SEQRES 47 J 977 ALA PHE SER VAL ILE TRP GLU LEU ASP ASP SER ALA ASN SEQRES 48 J 977 ILE VAL ASN VAL ASN PHE MET LYS SER VAL ILE ARG SER SEQRES 49 J 977 ARG GLU ALA PHE SER TYR GLU GLN ALA GLN LEU ARG ILE SEQRES 50 J 977 ASP ASP LYS THR GLN ASN ASP GLU LEU THR MET GLY MET SEQRES 51 J 977 ARG ALA LEU LEU LYS LEU SER VAL LYS LEU LYS GLN LYS SEQRES 52 J 977 ARG LEU GLU ALA GLY ALA LEU ASN LEU ALA SER PRO GLU SEQRES 53 J 977 VAL LYS VAL HIS MET ASP SER GLU THR SER ASP PRO ASN SEQRES 54 J 977 GLU VAL GLU ILE LYS LYS LEU LEU ALA THR ASN SER LEU SEQRES 55 J 977 VAL GLU GLU PHE MET LEU LEU ALA ASN ILE SER VAL ALA SEQRES 56 J 977 ARG LYS ILE TYR ASP ALA PHE PRO GLN THR ALA MET LEU SEQRES 57 J 977 ARG ARG HIS ALA ALA PRO PRO SER THR ASN PHE GLU ILE SEQRES 58 J 977 LEU ASN GLU MET LEU ASN THR ARG LYS ASN MET SER ILE SEQRES 59 J 977 SER LEU GLU SER SER LYS ALA LEU ALA ASP SER LEU ASP SEQRES 60 J 977 ARG CYS VAL ASP PRO GLU ASP PRO TYR PHE ASN THR LEU SEQRES 61 J 977 VAL ARG ILE MET SER THR ARG CYS MET MET ALA ALA GLN SEQRES 62 J 977 TYR PHE TYR SER GLY ALA TYR SER TYR PRO ASP PHE ARG SEQRES 63 J 977 HIS TYR GLY LEU ALA VAL ASP ILE TYR THR HIS PHE THR SEQRES 64 J 977 SER PRO ILE ARG ARG TYR CYS ASP VAL VAL ALA HIS ARG SEQRES 65 J 977 GLN LEU ALA GLY ALA ILE GLY TYR GLU PRO LEU SER LEU SEQRES 66 J 977 THR HIS ARG ASP LYS ASN LYS MET ASP MET ILE CYS ARG SEQRES 67 J 977 ASN ILE ASN ARG LYS HIS ARG ASN ALA GLN PHE ALA GLY SEQRES 68 J 977 ARG ALA SER ILE GLU TYR TYR VAL GLY GLN VAL MET ARG SEQRES 69 J 977 ASN ASN GLU SER THR GLU THR GLY TYR VAL ILE LYS VAL SEQRES 70 J 977 PHE ASN ASN GLY ILE VAL VAL LEU VAL PRO LYS PHE GLY SEQRES 71 J 977 VAL GLU GLY LEU ILE ARG LEU ASP ASN LEU THR GLU ASP SEQRES 72 J 977 PRO ASN SER ALA ALA PHE ASP GLU VAL GLU TYR LYS LEU SEQRES 73 J 977 THR PHE VAL PRO THR ASN SER ASP LYS PRO ARG ASP VAL SEQRES 74 J 977 TYR VAL PHE ASP LYS VAL GLU VAL GLN VAL ARG SER VAL SEQRES 75 J 977 MET ASP PRO ILE THR SER LYS ARG LYS ALA GLU LEU LEU SEQRES 76 J 977 LEU LYS HET CL B1240 1 HET GOL J2002 6 HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 CL CL 1- FORMUL 5 GOL C3 H8 O3 HELIX 1 1 SER A 8 ARG A 20 1 13 HELIX 2 2 ILE A 107 SER A 115 1 9 HELIX 3 3 PHE A 147 ALA A 157 1 11 HELIX 4 4 THR A 224 ARG A 231 1 8 HELIX 5 5 ASP A 257 ASN A 291 1 35 HELIX 6 6 TYR A 293 THR A 298 1 6 HELIX 7 7 GLU B 94 VAL B 112 1 19 HELIX 8 8 ILE B 143 ALA B 150 1 8 HELIX 9 9 ASN B 175 MET B 182 1 8 HELIX 10 10 LEU B 207 ILE B 216 1 10 HELIX 11 11 ALA B 221 LYS B 238 1 18 HELIX 12 12 LYS J 54 ILE J 58 5 5 HELIX 13 13 ASP J 91 GLU J 103 1 13 HELIX 14 14 GLN J 115 SER J 125 1 11 HELIX 15 15 SER J 125 ASP J 138 1 14 HELIX 16 16 ASP J 168 LYS J 186 1 19 HELIX 17 17 PRO J 187 ASP J 189 5 3 HELIX 18 18 LEU J 218 LEU J 224 1 7 HELIX 19 19 SER J 260 MET J 265 1 6 HELIX 20 20 PRO J 322 TRP J 326 5 5 HELIX 21 21 ASP J 335 PHE J 339 5 5 HELIX 22 22 SER J 366 SER J 383 1 18 HELIX 23 23 ALA J 408 VAL J 412 5 5 HELIX 24 24 ALA J 442 LYS J 447 5 6 HELIX 25 25 ALA J 477 HIS J 488 1 12 HELIX 26 26 SER J 496 GLU J 501 1 6 HELIX 27 27 ASP J 518 ASP J 525 1 8 HELIX 28 28 PRO J 526 ARG J 531 5 6 HELIX 29 29 ASP J 572 VAL J 577 1 6 HELIX 30 30 THR J 581 GLU J 586 1 6 HELIX 31 31 TYR J 654 ASP J 663 1 10 HELIX 32 32 MET J 674 GLU J 690 1 17 HELIX 33 33 SER J 698 VAL J 703 1 6 HELIX 34 34 LEU J 721 PHE J 746 1 26 HELIX 35 35 PRO J 759 ASN J 762 5 4 HELIX 36 36 PHE J 763 ASN J 775 1 13 HELIX 37 37 SER J 782 CYS J 793 1 12 HELIX 38 38 TYR J 800 ARG J 811 1 12 HELIX 39 39 SER J 825 PHE J 829 5 5 HELIX 40 40 ARG J 848 ALA J 859 1 12 HELIX 41 41 SER J 868 ARG J 872 5 5 HELIX 42 42 ASP J 873 ALA J 894 1 22 HELIX 43 43 ARG J 896 VAL J 903 1 8 HELIX 44 44 GLN J 905 ASN J 910 1 6 HELIX 45 45 ARG J 940 LEU J 944 5 5 HELIX 46 46 ASP J 947 ALA J 951 5 5 SHEET 1 AA 5 GLU A 37 THR A 39 0 SHEET 2 AA 5 VAL A 47 LYS A 50 -1 O SER A 48 N THR A 39 SHEET 3 AA 5 LYS A 55 ALA A 65 -1 O VAL A 56 N VAL A 49 SHEET 4 AA 5 LYS A 130 ASP A 142 -1 O CYS A 131 N ALA A 65 SHEET 5 AA 5 PHE A 77 THR A 81 1 O VAL A 78 N ALA A 136 SHEET 1 AB 4 GLU A 37 THR A 39 0 SHEET 2 AB 4 VAL A 47 LYS A 50 -1 O SER A 48 N THR A 39 SHEET 3 AB 4 LYS A 55 ALA A 65 -1 O VAL A 56 N VAL A 49 SHEET 4 AB 4 LYS A 130 ASP A 142 -1 O CYS A 131 N ALA A 65 SHEET 1 AC 2 LYS A 163 LYS A 164 0 SHEET 2 AC 2 VAL A 185 PRO A 186 -1 O VAL A 185 N LYS A 164 SHEET 1 AD 5 SER A 219 ILE A 221 0 SHEET 2 AD 5 ILE A 194 PHE A 200 -1 O SER A 199 N ILE A 220 SHEET 3 AD 5 LEU A 235 LEU A 239 -1 O LEU A 235 N PHE A 198 SHEET 4 AD 5 GLU A 244 LYS A 250 -1 N VAL A 246 O THR A 238 SHEET 5 AD 5 ILE B 205 PRO B 206 -1 O ILE B 205 N VAL A 245 SHEET 1 AE 4 SER A 219 ILE A 221 0 SHEET 2 AE 4 ILE A 194 PHE A 200 -1 O SER A 199 N ILE A 220 SHEET 3 AE 4 LEU A 235 LEU A 239 -1 O LEU A 235 N PHE A 198 SHEET 4 AE 4 GLU A 244 LYS A 250 -1 N VAL A 246 O THR A 238 SHEET 1 AF 3 GLU A 300 ALA A 302 0 SHEET 2 AF 3 LYS J 599 ILE J 601 -1 O ARG J 600 N ASN A 301 SHEET 3 AF 3 VAL J 594 LEU J 596 -1 O VAL J 594 N ILE J 601 SHEET 1 BA 5 GLU B 26 ILE B 29 0 SHEET 2 BA 5 SER B 40 GLU B 43 -1 O TYR B 41 N SER B 28 SHEET 3 BA 5 LYS B 48 LYS B 57 -1 O ILE B 49 N MET B 42 SHEET 4 BA 5 THR B 120 GLU B 130 -1 O VAL B 121 N LYS B 57 SHEET 5 BA 5 ALA B 70 ILE B 78 1 O LEU B 71 N ILE B 122 SHEET 1 JA 5 ARG J 144 PHE J 148 0 SHEET 2 JA 5 ASP J 110 PRO J 114 1 O VAL J 111 N ILE J 146 SHEET 3 JA 5 HIS J 86 LEU J 90 1 O VAL J 88 N ILE J 112 SHEET 4 JA 5 ASN J 191 THR J 196 1 O ASN J 191 N TYR J 87 SHEET 5 JA 5 THR J 215 SER J 217 1 O LYS J 216 N THR J 196 SHEET 1 JB 2 GLN J 315 LEU J 320 0 SHEET 2 JB 2 ALA J 390 ARG J 397 -1 O LYS J 391 N GLU J 319 SHEET 1 JC 3 GLN J 402 TYR J 403 0 SHEET 2 JC 3 ILE J 449 SER J 455 -1 O ILE J 451 N TYR J 403 SHEET 3 JC 3 LEU J 464 ASP J 470 -1 O LEU J 464 N ASP J 454 SHEET 1 JD 2 GLN J 420 VAL J 424 0 SHEET 2 JD 2 VAL J 434 THR J 438 -1 O VAL J 434 N VAL J 424 SHEET 1 JE 5 LYS J 532 ASP J 533 0 SHEET 2 JE 5 ILE J 636 ARG J 647 1 O LYS J 643 N LYS J 532 SHEET 3 JE 5 ASP J 620 LEU J 630 -1 O ARG J 621 N ILE J 646 SHEET 4 JE 5 TRP J 564 ALA J 571 -1 O TRP J 564 N LEU J 630 SHEET 5 JE 5 ASP J 552 ALA J 553 -1 O ALA J 553 N HIS J 569 SHEET 1 JF 5 LYS J 532 ASP J 533 0 SHEET 2 JF 5 ILE J 636 ARG J 647 1 O LYS J 643 N LYS J 532 SHEET 3 JF 5 ASP J 620 LEU J 630 -1 O ARG J 621 N ILE J 646 SHEET 4 JF 5 TRP J 564 ALA J 571 -1 O TRP J 564 N LEU J 630 SHEET 5 JF 5 LYS J 557 LYS J 558 -1 O LYS J 557 N GLU J 565 SHEET 1 JG 2 CYS J 540 ASP J 543 0 SHEET 2 JG 2 GLU J 650 SER J 653 1 O GLU J 650 N SER J 541 SHEET 1 JH 2 MET J 751 ARG J 754 0 SHEET 2 JH 2 GLN J 817 TYR J 820 -1 O GLN J 817 N ARG J 754 SHEET 1 JI 3 THR J 913 GLU J 914 0 SHEET 2 JI 3 VAL J 981 VAL J 983 -1 O VAL J 981 N GLU J 914 SHEET 3 JI 3 LEU J 998 LEU J1000 -1 O LEU J 999 N GLN J 982 SHEET 1 JJ 2 VAL J 918 LYS J 920 0 SHEET 2 JJ 2 VAL J 927 VAL J 928 -1 O VAL J 927 N ILE J 919 SHEET 1 JK 3 ALA J 952 ASP J 954 0 SHEET 2 JK 3 LYS J 959 PHE J 962 -1 O LYS J 959 N ASP J 954 SHEET 3 JK 3 ARG J 971 TYR J 974 -1 O ARG J 971 N PHE J 962 SSBOND 1 CYS J 52 CYS J 55 1555 1555 2.07 CISPEP 1 ALA J 81 PRO J 82 0 9.79 CISPEP 2 GLU J 210 SER J 211 0 -7.05 SITE 1 AC1 4 HIS B 32 PRO B 33 HIS B 34 ALA B 35 SITE 1 AC2 4 ILE J 280 PHE J 285 ALA J 310 CYS J 430 CRYST1 110.900 125.680 139.400 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009017 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007174 0.00000