HEADER SUGAR BINDING PROTEIN 13-AUG-09 2WQ4 TITLE N-TERMINAL DOMAIN OF BC2L-C LECTIN FROM BURKHOLDERIA CENOCEPACIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: LECTIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, RESIDUES 1-156; COMPND 5 SYNONYM: BC2L-C N-TERMINAL DOMAIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 216591; SOURCE 4 STRAIN: J2315; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET25 KEYWDS LUNG, PATHOGEN, INFECTION, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR O.SULAK,G.CIOCI,M.LAHMAN,M.DELIA,A.VARROT,A.IMBERTY,M.WIMMEROVA REVDAT 4 29-JUL-20 2WQ4 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 28-JUN-17 2WQ4 1 REMARK REVDAT 2 23-FEB-10 2WQ4 1 JRNL REMARK REVDAT 1 12-JAN-10 2WQ4 0 JRNL AUTH O.SULAK,G.CIOCI,M.LAHMAN,M.DELIA,A.VARROT,A.IMBERTY, JRNL AUTH 2 M.WIMMEROVA JRNL TITL A TNF-LIKE TRIMERIC LECTIN DOMAIN FROM BURKHOLDERIA JRNL TITL 2 CENOCEPACIA WITH SPECIFICITY FOR FUCOSYLATED HUMAN JRNL TITL 3 HISTO-BLOOD GROUP ANTIGENS JRNL REF STRUCTURE V. 18 59 2010 JRNL REFN ISSN 0969-2126 JRNL PMID 20152153 JRNL DOI 10.1016/J.STR.2009.10.021 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 60601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.133 REMARK 3 R VALUE (WORKING SET) : 0.131 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3244 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4084 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2150 REMARK 3 BIN FREE R VALUE SET COUNT : 225 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2895 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 513 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.058 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.032 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.813 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3137 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1994 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4316 ; 1.513 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4926 ; 0.862 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 422 ; 7.337 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;34.252 ;24.184 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 450 ;10.856 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;20.384 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 520 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3542 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 615 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2053 ; 1.188 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 843 ; 0.460 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3346 ; 1.846 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1084 ; 2.537 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 970 ; 3.417 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5131 ; 1.234 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 518 ; 6.208 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5046 ; 1.968 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 2WQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1290040728. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9755 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63845 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 39.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.920 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: HKL2MAP, ARP/WARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NABR, 0.1M BIS-TRIS PROPANE PH REMARK 280 6.5 AND 20% PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.55000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.63000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.63000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.55000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 0 REMARK 465 GLN A 135 REMARK 465 GLY A 136 REMARK 465 SER A 137 REMARK 465 GLY A 138 REMARK 465 ASN A 139 REMARK 465 GLN A 140 REMARK 465 GLY A 141 REMARK 465 ALA A 142 REMARK 465 GLU A 143 REMARK 465 THR A 144 REMARK 465 GLY A 145 REMARK 465 GLY A 146 REMARK 465 THR A 147 REMARK 465 GLY A 148 REMARK 465 ALA A 149 REMARK 465 GLY A 150 REMARK 465 ASN A 151 REMARK 465 ILE A 152 REMARK 465 GLY A 153 REMARK 465 GLY A 154 REMARK 465 GLY A 155 REMARK 465 MSE B 0 REMARK 465 PRO B 132 REMARK 465 SER B 133 REMARK 465 SER B 134 REMARK 465 GLN B 135 REMARK 465 GLY B 136 REMARK 465 SER B 137 REMARK 465 GLY B 138 REMARK 465 ASN B 139 REMARK 465 GLN B 140 REMARK 465 GLY B 141 REMARK 465 ALA B 142 REMARK 465 GLU B 143 REMARK 465 THR B 144 REMARK 465 GLY B 145 REMARK 465 GLY B 146 REMARK 465 THR B 147 REMARK 465 GLY B 148 REMARK 465 ALA B 149 REMARK 465 GLY B 150 REMARK 465 ASN B 151 REMARK 465 ILE B 152 REMARK 465 GLY B 153 REMARK 465 GLY B 154 REMARK 465 GLY B 155 REMARK 465 MSE C 0 REMARK 465 PRO C 132 REMARK 465 SER C 133 REMARK 465 SER C 134 REMARK 465 GLN C 135 REMARK 465 GLY C 136 REMARK 465 SER C 137 REMARK 465 GLY C 138 REMARK 465 ASN C 139 REMARK 465 GLN C 140 REMARK 465 GLY C 141 REMARK 465 ALA C 142 REMARK 465 GLU C 143 REMARK 465 THR C 144 REMARK 465 GLY C 145 REMARK 465 GLY C 146 REMARK 465 THR C 147 REMARK 465 GLY C 148 REMARK 465 ALA C 149 REMARK 465 GLY C 150 REMARK 465 ASN C 151 REMARK 465 ILE C 152 REMARK 465 GLY C 153 REMARK 465 GLY C 154 REMARK 465 GLY C 155 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 34 CD NE CZ NH1 NH2 REMARK 470 ARG B 34 CD NE CZ NH1 NH2 REMARK 470 ALA B 131 CA C O CB REMARK 470 GLU C 16 OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2131 O HOH A 2132 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 53 85.10 -158.49 REMARK 500 PHE A 54 72.63 51.20 REMARK 500 SER A 98 -6.91 -58.53 REMARK 500 ASN B 53 77.39 -151.20 REMARK 500 PHE B 54 70.25 54.23 REMARK 500 THR B 63 -168.31 -121.54 REMARK 500 PHE C 54 70.80 53.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2004 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH A2005 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH A2006 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A2022 DISTANCE = 8.79 ANGSTROMS REMARK 525 HOH A2039 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH B2007 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH B2009 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B2012 DISTANCE = 6.28 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 METHYL 1-SELENO-A-L-FUCOPYRANOSIDE (SFU): CO-CRYSTALLIZED REMARK 600 WITH LECTIN DBREF 2WQ4 A 0 155 UNP B4EH86 B4EH86_BURCJ 1 156 DBREF 2WQ4 B 0 155 UNP B4EH86 B4EH86_BURCJ 1 156 DBREF 2WQ4 C 0 155 UNP B4EH86 B4EH86_BURCJ 1 156 SEQRES 1 A 156 MSE PRO LEU LEU SER ALA SER ILE VAL SER ALA PRO VAL SEQRES 2 A 156 VAL THR SER GLU THR TYR VAL ASP ILE PRO GLY LEU TYR SEQRES 3 A 156 LEU ASP VAL ALA LYS ALA GLY ILE ARG ASP GLY LYS LEU SEQRES 4 A 156 GLN VAL ILE LEU ASN VAL PRO THR PRO TYR ALA THR GLY SEQRES 5 A 156 ASN ASN PHE PRO GLY ILE TYR PHE ALA ILE ALA THR ASN SEQRES 6 A 156 GLN GLY VAL VAL ALA ASP GLY CYS PHE THR TYR SER SER SEQRES 7 A 156 LYS VAL PRO GLU SER THR GLY ARG MSE PRO PHE THR LEU SEQRES 8 A 156 VAL ALA THR ILE ASP VAL GLY SER GLY VAL THR PHE VAL SEQRES 9 A 156 LYS GLY GLN TRP LYS SER VAL ARG GLY SER ALA MSE HIS SEQRES 10 A 156 ILE ASP SER TYR ALA SER LEU SER ALA ILE TRP GLY THR SEQRES 11 A 156 ALA ALA PRO SER SER GLN GLY SER GLY ASN GLN GLY ALA SEQRES 12 A 156 GLU THR GLY GLY THR GLY ALA GLY ASN ILE GLY GLY GLY SEQRES 1 B 156 MSE PRO LEU LEU SER ALA SER ILE VAL SER ALA PRO VAL SEQRES 2 B 156 VAL THR SER GLU THR TYR VAL ASP ILE PRO GLY LEU TYR SEQRES 3 B 156 LEU ASP VAL ALA LYS ALA GLY ILE ARG ASP GLY LYS LEU SEQRES 4 B 156 GLN VAL ILE LEU ASN VAL PRO THR PRO TYR ALA THR GLY SEQRES 5 B 156 ASN ASN PHE PRO GLY ILE TYR PHE ALA ILE ALA THR ASN SEQRES 6 B 156 GLN GLY VAL VAL ALA ASP GLY CYS PHE THR TYR SER SER SEQRES 7 B 156 LYS VAL PRO GLU SER THR GLY ARG MSE PRO PHE THR LEU SEQRES 8 B 156 VAL ALA THR ILE ASP VAL GLY SER GLY VAL THR PHE VAL SEQRES 9 B 156 LYS GLY GLN TRP LYS SER VAL ARG GLY SER ALA MSE HIS SEQRES 10 B 156 ILE ASP SER TYR ALA SER LEU SER ALA ILE TRP GLY THR SEQRES 11 B 156 ALA ALA PRO SER SER GLN GLY SER GLY ASN GLN GLY ALA SEQRES 12 B 156 GLU THR GLY GLY THR GLY ALA GLY ASN ILE GLY GLY GLY SEQRES 1 C 156 MSE PRO LEU LEU SER ALA SER ILE VAL SER ALA PRO VAL SEQRES 2 C 156 VAL THR SER GLU THR TYR VAL ASP ILE PRO GLY LEU TYR SEQRES 3 C 156 LEU ASP VAL ALA LYS ALA GLY ILE ARG ASP GLY LYS LEU SEQRES 4 C 156 GLN VAL ILE LEU ASN VAL PRO THR PRO TYR ALA THR GLY SEQRES 5 C 156 ASN ASN PHE PRO GLY ILE TYR PHE ALA ILE ALA THR ASN SEQRES 6 C 156 GLN GLY VAL VAL ALA ASP GLY CYS PHE THR TYR SER SER SEQRES 7 C 156 LYS VAL PRO GLU SER THR GLY ARG MSE PRO PHE THR LEU SEQRES 8 C 156 VAL ALA THR ILE ASP VAL GLY SER GLY VAL THR PHE VAL SEQRES 9 C 156 LYS GLY GLN TRP LYS SER VAL ARG GLY SER ALA MSE HIS SEQRES 10 C 156 ILE ASP SER TYR ALA SER LEU SER ALA ILE TRP GLY THR SEQRES 11 C 156 ALA ALA PRO SER SER GLN GLY SER GLY ASN GLN GLY ALA SEQRES 12 C 156 GLU THR GLY GLY THR GLY ALA GLY ASN ILE GLY GLY GLY MODRES 2WQ4 MSE A 86 MET SELENOMETHIONINE MODRES 2WQ4 MSE A 115 MET SELENOMETHIONINE MODRES 2WQ4 MSE B 86 MET SELENOMETHIONINE MODRES 2WQ4 MSE B 115 MET SELENOMETHIONINE MODRES 2WQ4 MSE C 86 MET SELENOMETHIONINE MODRES 2WQ4 MSE C 115 MET SELENOMETHIONINE HET MSE A 86 8 HET MSE A 115 8 HET MSE B 86 8 HET MSE B 115 8 HET MSE C 86 8 HET MSE C 115 8 HET SFU A 200 12 HET BR A 300 1 HET SFU B 200 12 HET SFU C 200 12 HETNAM MSE SELENOMETHIONINE HETNAM SFU METHYL 1-SELENO-ALPHA-L-FUCOPYRANOSIDE HETNAM BR BROMIDE ION HETSYN SFU METHYL 1-SELENO-ALPHA-L-FUCOPYRANOSIDE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 4 SFU 3(C7 H14 O4 SE) FORMUL 5 BR BR 1- FORMUL 8 HOH *513(H2 O) HELIX 1 1 ASP A 27 GLY A 32 1 6 HELIX 2 2 GLY A 97 GLY A 99 5 3 HELIX 3 3 ASP C 27 GLY C 32 1 6 SHEET 1 AA 4 LEU A 2 ILE A 7 0 SHEET 2 AA 4 ALA A 121 ILE A 126 -1 O ALA A 121 N ILE A 7 SHEET 3 AA 4 LEU A 38 VAL A 44 -1 O GLN A 39 N ILE A 126 SHEET 4 AA 4 PHE A 88 ILE A 94 -1 O PHE A 88 N VAL A 44 SHEET 1 AB 2 TYR A 48 THR A 50 0 SHEET 2 AB 2 ALA A 114 HIS A 116 -1 O ALA A 114 N THR A 50 SHEET 1 AC 2 TYR A 58 THR A 63 0 SHEET 2 AC 2 VAL A 103 LYS A 108 -1 O LYS A 104 N ALA A 62 SHEET 1 BA 4 LEU B 2 ILE B 7 0 SHEET 2 BA 4 ALA B 121 ILE B 126 -1 O ALA B 121 N ILE B 7 SHEET 3 BA 4 LEU B 38 VAL B 44 -1 O GLN B 39 N ILE B 126 SHEET 4 BA 4 PHE B 88 ILE B 94 -1 O PHE B 88 N VAL B 44 SHEET 1 BB 3 LEU B 26 ASP B 27 0 SHEET 2 BB 3 PHE B 102 LYS B 108 -1 O VAL B 103 N LEU B 26 SHEET 3 BB 3 TYR B 58 ALA B 62 -1 O TYR B 58 N LYS B 108 SHEET 1 BC 2 TYR B 48 THR B 50 0 SHEET 2 BC 2 ALA B 114 HIS B 116 -1 O ALA B 114 N THR B 50 SHEET 1 CA 4 LEU C 2 ILE C 7 0 SHEET 2 CA 4 ALA C 121 ILE C 126 -1 O ALA C 121 N ILE C 7 SHEET 3 CA 4 LEU C 38 VAL C 44 -1 O GLN C 39 N ILE C 126 SHEET 4 CA 4 PHE C 88 ILE C 94 -1 O PHE C 88 N VAL C 44 SHEET 1 CB 2 TYR C 48 THR C 50 0 SHEET 2 CB 2 ALA C 114 HIS C 116 -1 O ALA C 114 N THR C 50 SHEET 1 CC 2 TYR C 58 THR C 63 0 SHEET 2 CC 2 VAL C 103 LYS C 108 -1 O LYS C 104 N ALA C 62 LINK C ARG A 85 N MSE A 86 1555 1555 1.32 LINK C MSE A 86 N PRO A 87 1555 1555 1.34 LINK C ALA A 114 N MSE A 115 1555 1555 1.32 LINK C MSE A 115 N HIS A 116 1555 1555 1.33 LINK C ARG B 85 N MSE B 86 1555 1555 1.35 LINK C MSE B 86 N PRO B 87 1555 1555 1.34 LINK C ALA B 114 N MSE B 115 1555 1555 1.33 LINK C MSE B 115 N HIS B 116 1555 1555 1.34 LINK C ARG C 85 N MSE C 86 1555 1555 1.33 LINK C MSE C 86 N PRO C 87 1555 1555 1.33 LINK C ALA C 114 N MSE C 115 1555 1555 1.33 LINK C MSE C 115 N HIS C 116 1555 1555 1.34 CRYST1 43.100 76.730 103.260 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023202 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013033 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009684 0.00000