HEADER TRANSFERASE 25-AUG-09 2WQQ TITLE CRYSTALLOGRAPHIC ANALYSIS OF MONOMERIC CSTII COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-2,3-/2,8-SIALYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ALPHA-2\,3/8-SIALYLTRANSFERASE, CSTII; COMPND 5 EC: 2.4.99.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 STRAIN: OH4384; SOURCE 5 ATCC: 43446; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS GTA, CSTII, TRANSFERASE, SIALYLTRANSFERASE, GLYCOSYLTRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR P.H.W.CHAN,L.L.LAIRSON,H.J.LEE,W.W.WAKARCHUK,N.C.J.STRYNADKA, AUTHOR 2 S.G.WITHERS,L.P.MCINTOSH REVDAT 5 20-DEC-23 2WQQ 1 REMARK REVDAT 4 01-APR-15 2WQQ 1 JRNL REVDAT 3 02-NOV-11 2WQQ 1 JRNL REVDAT 2 13-JUL-11 2WQQ 1 VERSN REVDAT 1 27-OCT-09 2WQQ 0 JRNL AUTH P.H.W.CHAN,L.L.LAIRSON,H.J.LEE,W.W.WAKARCHUK, JRNL AUTH 2 N.C.J.STRYNADKA,S.G.WITHERS,L.P.MCINTOSH JRNL TITL NMR SPECTROSCOPIC CHARACTERIZATION OF THE SIALYLTRANSFERASE JRNL TITL 2 CSTII FROM CAMPLYOBACTER JEJUNI: HISTIDINE 188 IS THE JRNL TITL 3 GENERAL BASE. JRNL REF BIOCHEMISTRY V. 48 11220 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19824695 JRNL DOI 10.1021/BI901606N REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0066 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13972 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 743 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 988 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2046 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 77 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.21000 REMARK 3 B22 (A**2) : -2.21000 REMARK 3 B33 (A**2) : 4.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.259 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.197 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.898 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2151 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1834 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2902 ; 1.366 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4278 ; 0.635 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 242 ; 6.195 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 111 ;34.319 ;24.955 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 367 ;17.115 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 9.551 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 303 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2334 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 461 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1220 ; 0.510 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 494 ; 0.125 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1963 ; 0.952 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 931 ; 1.528 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 939 ; 2.407 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 20 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9520 -39.0543 -17.9372 REMARK 3 T TENSOR REMARK 3 T11: 0.0883 T22: 0.1288 REMARK 3 T33: 0.4816 T12: 0.0448 REMARK 3 T13: -0.0320 T23: -0.2223 REMARK 3 L TENSOR REMARK 3 L11: 5.0296 L22: 5.5639 REMARK 3 L33: 7.7647 L12: -0.5039 REMARK 3 L13: 2.0708 L23: 2.1517 REMARK 3 S TENSOR REMARK 3 S11: 0.1823 S12: 0.4888 S13: -1.1671 REMARK 3 S21: -0.1853 S22: -0.0241 S23: -0.2824 REMARK 3 S31: 0.3744 S32: 0.2064 S33: -0.1582 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 21 A 74 REMARK 3 ORIGIN FOR THE GROUP (A): 19.2454 -26.9275 -12.2911 REMARK 3 T TENSOR REMARK 3 T11: 0.0790 T22: 0.0842 REMARK 3 T33: 0.1308 T12: 0.0570 REMARK 3 T13: -0.0009 T23: -0.0691 REMARK 3 L TENSOR REMARK 3 L11: 5.0552 L22: 5.2204 REMARK 3 L33: 1.7974 L12: -1.2094 REMARK 3 L13: 1.2280 L23: 1.1940 REMARK 3 S TENSOR REMARK 3 S11: 0.2026 S12: 0.4517 S13: -0.5537 REMARK 3 S21: -0.2220 S22: -0.0115 S23: -0.3688 REMARK 3 S31: 0.0917 S32: 0.1995 S33: -0.1911 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 75 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 1.7903 -17.8986 -8.3229 REMARK 3 T TENSOR REMARK 3 T11: 0.0815 T22: 0.0322 REMARK 3 T33: 0.0618 T12: 0.0294 REMARK 3 T13: -0.0044 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 5.8080 L22: 1.7152 REMARK 3 L33: 0.7446 L12: 1.1064 REMARK 3 L13: -0.1302 L23: 0.0399 REMARK 3 S TENSOR REMARK 3 S11: 0.1179 S12: 0.1126 S13: -0.1123 REMARK 3 S21: -0.0397 S22: -0.0136 S23: 0.1727 REMARK 3 S31: 0.0638 S32: 0.0337 S33: -0.1043 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 129 A 147 REMARK 3 ORIGIN FOR THE GROUP (A): 3.5809 -27.0691 -16.7590 REMARK 3 T TENSOR REMARK 3 T11: 0.1458 T22: 0.1549 REMARK 3 T33: 0.2517 T12: 0.0344 REMARK 3 T13: -0.0602 T23: -0.1532 REMARK 3 L TENSOR REMARK 3 L11: 6.2201 L22: 3.0379 REMARK 3 L33: 6.1656 L12: -0.2262 REMARK 3 L13: -1.8452 L23: -0.1112 REMARK 3 S TENSOR REMARK 3 S11: 0.1628 S12: 0.6135 S13: -1.0495 REMARK 3 S21: -0.2098 S22: -0.1200 S23: 0.4065 REMARK 3 S31: 0.0541 S32: -0.0417 S33: -0.0428 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 148 A 191 REMARK 3 ORIGIN FOR THE GROUP (A): 11.3925 -34.6287 -2.5050 REMARK 3 T TENSOR REMARK 3 T11: 0.2161 T22: 0.0832 REMARK 3 T33: 0.5226 T12: 0.0692 REMARK 3 T13: 0.0443 T23: 0.0656 REMARK 3 L TENSOR REMARK 3 L11: 4.5949 L22: 4.3541 REMARK 3 L33: 4.2833 L12: 0.8510 REMARK 3 L13: 3.2379 L23: 2.8011 REMARK 3 S TENSOR REMARK 3 S11: 0.1940 S12: -0.2719 S13: -1.0712 REMARK 3 S21: 0.6940 S22: 0.0126 S23: 0.1046 REMARK 3 S31: 0.6991 S32: -0.0417 S33: -0.2066 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 192 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8030 -33.7349 -18.9944 REMARK 3 T TENSOR REMARK 3 T11: 0.2256 T22: 0.2415 REMARK 3 T33: 0.4328 T12: 0.0171 REMARK 3 T13: -0.1830 T23: -0.2631 REMARK 3 L TENSOR REMARK 3 L11: 7.6469 L22: 4.5548 REMARK 3 L33: 0.7446 L12: -3.6086 REMARK 3 L13: -1.3841 L23: -0.2359 REMARK 3 S TENSOR REMARK 3 S11: 0.3316 S12: 1.1197 S13: -1.4539 REMARK 3 S21: -0.3400 S22: -0.3990 S23: 0.8481 REMARK 3 S31: 0.1933 S32: -0.2466 S33: 0.0674 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 235 REMARK 3 ORIGIN FOR THE GROUP (A): 11.7433 -43.5102 -20.2425 REMARK 3 T TENSOR REMARK 3 T11: 0.5299 T22: 0.2004 REMARK 3 T33: 0.8593 T12: 0.1067 REMARK 3 T13: 0.0312 T23: -0.3668 REMARK 3 L TENSOR REMARK 3 L11: 6.8934 L22: 2.5264 REMARK 3 L33: 2.3807 L12: -3.9424 REMARK 3 L13: 1.3616 L23: -0.5769 REMARK 3 S TENSOR REMARK 3 S11: 0.1765 S12: 0.6879 S13: -1.4456 REMARK 3 S21: -0.2064 S22: -0.3927 S23: 0.8078 REMARK 3 S31: 0.7803 S32: 0.1272 S33: 0.2162 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 236 A 258 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1472 -20.1298 0.4134 REMARK 3 T TENSOR REMARK 3 T11: 0.0876 T22: 0.0972 REMARK 3 T33: 0.0828 T12: 0.0418 REMARK 3 T13: -0.0374 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 3.5304 L22: 9.9405 REMARK 3 L33: 6.4077 L12: -1.8031 REMARK 3 L13: -0.7565 L23: 4.7314 REMARK 3 S TENSOR REMARK 3 S11: -0.2934 S12: -0.2169 S13: -0.0901 REMARK 3 S21: 0.8833 S22: 0.2900 S23: -0.4625 REMARK 3 S31: 0.2993 S32: -0.0476 S33: 0.0034 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WQQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-AUG-09. REMARK 100 THE DEPOSITION ID IS D_1290040224. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14714 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 34.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1RO7 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM CITRATE TRIBASIC, 10% REMARK 280 PEG 3350, PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 58.31700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.31700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 22.69250 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 58.31700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.31700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 22.69250 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 58.31700 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 58.31700 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 22.69250 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 58.31700 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 58.31700 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 22.69250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ILE 53 TO SER REMARK 400 ENGINEERED RESIDUE IN CHAIN A, TYR 125 TO GLN REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 222 TO GLY REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 157 REMARK 465 ASN A 158 REMARK 465 GLY A 159 REMARK 465 SER A 160 REMARK 465 SER A 161 REMARK 465 ASN A 180 REMARK 465 ASP A 181 REMARK 465 ASN A 182 REMARK 465 SER A 183 REMARK 465 HIS A 184 REMARK 465 TYR A 185 REMARK 465 ILE A 186 REMARK 465 ASN A 259 REMARK 465 PHE A 260 REMARK 465 LYS A 261 REMARK 465 LYS A 262 REMARK 465 ILE A 263 REMARK 465 LYS A 264 REMARK 465 ILE A 265 REMARK 465 LYS A 266 REMARK 465 GLU A 267 REMARK 465 ASN A 268 REMARK 465 ILE A 269 REMARK 465 TYR A 270 REMARK 465 TYR A 271 REMARK 465 LYS A 272 REMARK 465 LEU A 273 REMARK 465 ILE A 274 REMARK 465 LYS A 275 REMARK 465 ASP A 276 REMARK 465 LEU A 277 REMARK 465 LEU A 278 REMARK 465 ARG A 279 REMARK 465 LEU A 280 REMARK 465 PRO A 281 REMARK 465 SER A 282 REMARK 465 ASP A 283 REMARK 465 ILE A 284 REMARK 465 LYS A 285 REMARK 465 HIS A 286 REMARK 465 TYR A 287 REMARK 465 PHE A 288 REMARK 465 LYS A 289 REMARK 465 GLY A 290 REMARK 465 LYS A 291 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 156 O HOH A 2061 1.79 REMARK 500 O4 PEG A 1260 O HOH A 2077 2.06 REMARK 500 N TYR A 162 O HOH A 2063 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 31 -120.31 45.48 REMARK 500 GLN A 32 41.79 -93.49 REMARK 500 ASN A 127 36.36 70.33 REMARK 500 PHE A 178 24.07 -73.36 REMARK 500 ASN A 228 40.93 -108.21 REMARK 500 ASN A 238 59.34 39.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CSF A 1259 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1260 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RO8 RELATED DB: PDB REMARK 900 STRUCTURAL ANALYSIS OF THE SIALYLTRANSFERASE CSTII REMARK 900 FROMCAMPYLOBACTER JEJUNI IN COMPLEX WITH A SUBSTRATE ANALOGUE, REMARK 900 CYTIDINE-5'- MONOPHOSPHATE REMARK 900 RELATED ID: 1RO7 RELATED DB: PDB REMARK 900 STRUCTURAL ANALYSIS OF THE SIALYLTRANSFERASE CSTII REMARK 900 FROMCAMPYLOBACTER JEJUNI IN COMPLEX WITH A SUBSTRATE ANALOGUE,CMP- REMARK 900 3FNEUAC. DBREF 2WQQ A 1 291 UNP Q9LAK3 Q9LAK3_CAMJE 1 291 SEQADV 2WQQ SER A 53 UNP Q9LAK3 ILE 53 ENGINEERED MUTATION SEQADV 2WQQ GLN A 125 UNP Q9LAK3 TYR 125 ENGINEERED MUTATION SEQADV 2WQQ GLY A 222 UNP Q9LAK3 GLU 222 ENGINEERED MUTATION SEQRES 1 A 291 MET LYS LYS VAL ILE ILE ALA GLY ASN GLY PRO SER LEU SEQRES 2 A 291 LYS GLU ILE ASP TYR SER ARG LEU PRO ASN ASP PHE ASP SEQRES 3 A 291 VAL PHE ARG CYS ASN GLN PHE TYR PHE GLU ASP LYS TYR SEQRES 4 A 291 TYR LEU GLY LYS LYS CYS LYS ALA VAL PHE TYR ASN PRO SEQRES 5 A 291 SER LEU PHE PHE GLU GLN TYR TYR THR LEU LYS HIS LEU SEQRES 6 A 291 ILE GLN ASN GLN GLU TYR GLU THR GLU LEU ILE MET CYS SEQRES 7 A 291 SER ASN TYR ASN GLN ALA HIS LEU GLU ASN GLU ASN PHE SEQRES 8 A 291 VAL LYS THR PHE TYR ASP TYR PHE PRO ASP ALA HIS LEU SEQRES 9 A 291 GLY TYR ASP PHE PHE LYS GLN LEU LYS ASP PHE ASN ALA SEQRES 10 A 291 TYR PHE LYS PHE HIS GLU ILE GLN PHE ASN GLN ARG ILE SEQRES 11 A 291 THR SER GLY VAL TYR MET CYS ALA VAL ALA ILE ALA LEU SEQRES 12 A 291 GLY TYR LYS GLU ILE TYR LEU SER GLY ILE ASP PHE TYR SEQRES 13 A 291 GLN ASN GLY SER SER TYR ALA PHE ASP THR LYS GLN LYS SEQRES 14 A 291 ASN LEU LEU LYS LEU ALA PRO ASN PHE LYS ASN ASP ASN SEQRES 15 A 291 SER HIS TYR ILE GLY HIS SER LYS ASN THR ASP ILE LYS SEQRES 16 A 291 ALA LEU GLU PHE LEU GLU LYS THR TYR LYS ILE LYS LEU SEQRES 17 A 291 TYR CYS LEU CYS PRO ASN SER LEU LEU ALA ASN PHE ILE SEQRES 18 A 291 GLY LEU ALA PRO ASN LEU ASN SER ASN PHE ILE ILE GLN SEQRES 19 A 291 GLU LYS ASN ASN TYR THR LYS ASP ILE LEU ILE PRO SER SEQRES 20 A 291 SER GLU ALA TYR GLY LYS PHE SER LYS ASN ILE ASN PHE SEQRES 21 A 291 LYS LYS ILE LYS ILE LYS GLU ASN ILE TYR TYR LYS LEU SEQRES 22 A 291 ILE LYS ASP LEU LEU ARG LEU PRO SER ASP ILE LYS HIS SEQRES 23 A 291 TYR PHE LYS GLY LYS HET CSF A1259 42 HET PEG A1260 7 HETNAM CSF CYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC HETNAM 2 CSF ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN CSF CMP-3FNEUAC FORMUL 2 CSF C20 H30 F N4 O16 P FORMUL 3 PEG C4 H10 O3 FORMUL 4 HOH *77(H2 O) HELIX 1 1 PRO A 11 GLU A 15 5 5 HELIX 2 2 ASP A 17 LEU A 21 5 5 HELIX 3 3 GLN A 32 GLU A 36 5 5 HELIX 4 4 ASN A 51 SER A 53 5 3 HELIX 5 5 LEU A 54 ASN A 68 1 15 HELIX 6 6 ASN A 88 THR A 94 1 7 HELIX 7 7 THR A 94 PHE A 99 1 6 HELIX 8 8 PHE A 108 GLN A 111 5 4 HELIX 9 9 LEU A 112 ASN A 127 1 16 HELIX 10 10 VAL A 134 LEU A 143 1 10 HELIX 11 11 GLN A 168 ALA A 175 1 8 HELIX 12 12 PRO A 176 LYS A 179 5 4 HELIX 13 13 SER A 189 LYS A 205 1 17 HELIX 14 14 SER A 215 PHE A 220 5 6 HELIX 15 15 PHE A 254 ILE A 258 5 5 SHEET 1 AA 6 GLU A 72 CYS A 78 0 SHEET 2 AA 6 LYS A 44 TYR A 50 1 O CYS A 45 N GLU A 74 SHEET 3 AA 6 PHE A 25 CYS A 30 1 O VAL A 27 N LYS A 46 SHEET 4 AA 6 LYS A 3 ILE A 6 1 O LYS A 3 N ASP A 26 SHEET 5 AA 6 GLU A 147 LEU A 150 1 O GLU A 147 N VAL A 4 SHEET 6 AA 6 LYS A 207 CYS A 210 1 O LYS A 207 N ILE A 148 SHEET 1 AB 2 LYS A 38 TYR A 39 0 SHEET 2 AB 2 GLN A 234 GLU A 235 -1 O GLN A 234 N TYR A 39 SITE 1 AC1 23 GLY A 8 ASN A 9 GLY A 10 CYS A 30 SITE 2 AC1 23 ASN A 31 GLN A 32 ASN A 51 GLN A 58 SITE 3 AC1 23 THR A 131 SER A 132 GLY A 133 GLY A 152 SITE 4 AC1 23 ILE A 153 ASP A 154 PHE A 155 TYR A 156 SITE 5 AC1 23 TYR A 162 PHE A 178 HIS A 188 HOH A2002 SITE 6 AC1 23 HOH A2011 HOH A2063 HOH A2066 SITE 1 AC2 10 TYR A 59 TYR A 98 PRO A 100 ALA A 117 SITE 2 AC2 10 LYS A 120 PHE A 121 ILE A 124 GLN A 125 SITE 3 AC2 10 HOH A2076 HOH A2077 CRYST1 116.634 116.634 45.385 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008574 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008574 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022034 0.00000