HEADER SUGAR BINDING PROTEIN 01-SEP-09 2WRA TITLE BCLA LECTIN FROM BURKHOLDERIA CENOCEPACIA COMPLEXED WITH AMAN1(AMAN1- TITLE 2 6)-3MAN TRISACCHARIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LECTIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BCLA MONOMER, RESIDUES 2-129; COMPND 5 SYNONYM: BCLA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 216591; SOURCE 4 STRAIN: J2315; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRSET; SOURCE 9 OTHER_DETAILS: DNA FROM BURKHOLDERIA CENOCEPACIA STRAIN J2315 SOURCE 10 OBTAINED FROM THE CZECH COLLECTION OF MICROORGANISMS AT BRNO KEYWDS SUGAR BINDING PROTEIN, BACTERIAL LECTIN, OLIGOSACCHARIDES EXPDTA X-RAY DIFFRACTION AUTHOR E.LAMEIGNERE,T.C.SHIAO,R.ROY,M.WIMMEROVA,F.DUBREUIL,A.VARROT, AUTHOR 2 A.IMBERTY REVDAT 6 20-DEC-23 2WRA 1 HETSYN SHEET REVDAT 5 29-JUL-20 2WRA 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE ATOM REVDAT 4 08-DEC-09 2WRA 1 JRNL REVDAT 3 24-NOV-09 2WRA 1 REMARK SHEET REVDAT 2 06-OCT-09 2WRA 1 JRNL REVDAT 1 29-SEP-09 2WRA 0 JRNL AUTH E.LAMEIGNERE,T.C.SHIAO,R.ROY,M.WIMMEROVA,F.DUBREUIL, JRNL AUTH 2 A.VARROT,A.IMBERTY JRNL TITL STRUCTURAL BASIS OF THE AFFINITY FOR OLIGOMANNOSIDES AND JRNL TITL 2 ANALOGS DISPLAYED BY BC2L-A, A BURKHOLDERIA CENOCEPACIA JRNL TITL 3 SOLUBLE LECTIN. JRNL REF GLYCOBIOLOGY V. 20 87 2010 JRNL REFN ISSN 0959-6658 JRNL PMID 19770128 JRNL DOI 10.1093/GLYCOB/CWP151 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 3 NUMBER OF REFLECTIONS : 43671 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2303 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2383 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.41 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 932 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 178 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.18000 REMARK 3 B12 (A**2) : 0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.031 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.033 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.018 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.819 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.975 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1069 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 713 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1468 ; 2.010 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1738 ; 1.551 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 138 ; 8.018 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ;35.935 ;24.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 158 ;11.610 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;13.552 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 167 ; 0.134 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1210 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 215 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 656 ; 1.902 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 266 ; 0.816 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1064 ; 2.851 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 413 ; 3.379 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 401 ; 4.560 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1782 ; 1.655 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 180 ; 9.616 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1751 ; 4.126 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U REFINED INDIVIDUALLY REMARK 4 REMARK 4 2WRA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1290040788. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794999 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47704 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 57.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.400 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.22000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2VNV REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 80% OF THE INITIAL PRECIPITANT REMARK 280 SOLUTION (30% PEG IN 0.2M AMMONIUM SULPHATE) REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 15.38633 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.77267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.77267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 15.38633 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -15.38633 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2061 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2164 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 ASP A 2 REMARK 465 SER A 3 REMARK 465 GLN A 4 REMARK 465 SER A 94 REMARK 465 ASP A 95 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2050 O HOH A 2108 5554 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 128 N GLY A 128 CA 0.094 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 10 -77.83 -91.36 REMARK 500 ASP A 113 -154.86 -155.39 REMARK 500 ASP A 113 -155.81 -155.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 ALPHA-D-MANNOSE (MAN): AMAN1-3AMAN1-6MAN TRISACCHARIDE REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 28 O REMARK 620 2 ASP A 115 OD1 144.1 REMARK 620 3 ASP A 115 OD2 153.6 45.3 REMARK 620 4 ASN A 117 OD1 86.4 69.2 76.4 REMARK 620 5 ASP A 118 OD1 84.2 69.2 114.2 87.1 REMARK 620 6 GLY A 128 O 82.0 121.0 77.5 87.2 165.3 REMARK 620 7 MAN B 2 O2 76.5 130.8 115.4 160.0 101.2 80.3 REMARK 620 8 MAN B 2 O3 133.1 64.9 71.7 134.1 77.1 116.2 65.8 REMARK 620 9 MAN B 3 O2 76.4 131.0 115.4 159.7 101.5 79.9 0.3 66.1 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 109 OE1 REMARK 620 2 GLU A 109 OE2 53.0 REMARK 620 3 ASP A 113 OD1 86.6 84.2 REMARK 620 4 ASP A 115 OD1 76.4 128.6 84.1 REMARK 620 5 ASP A 118 OD2 83.6 78.5 162.6 107.2 REMARK 620 6 ASP A 118 OD1 115.8 130.1 145.5 76.8 51.8 REMARK 620 7 MAN B 2 O3 147.6 147.5 75.8 74.9 119.3 71.6 REMARK 620 8 MAN B 2 O4 142.7 89.9 94.5 140.8 84.9 83.0 66.9 REMARK 620 9 MAN B 3 O3 148.5 146.1 75.3 76.3 119.6 72.4 1.4 65.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: PROVIDED BY DEPOSITOR REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: PROVIDED BY DEPOSITOR REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WR9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BURKHOLDERIA CENOCEPACIA LECTIN (BCLA) REMARK 900 COMPLEXED WITH AMAN1-3MAN DISACCHARIDE DBREF 2WRA A 1 128 UNP B4EH87 B4EH87_BURCJ 2 129 SEQRES 1 A 128 ALA ASP SER GLN THR SER SER ASN ARG ALA GLY GLU PHE SEQRES 2 A 128 SER ILE PRO PRO ASN THR ASP PHE ARG ALA ILE PHE PHE SEQRES 3 A 128 ALA ASN ALA ALA GLU GLN GLN HIS ILE LYS LEU PHE ILE SEQRES 4 A 128 GLY ASP SER GLN GLU PRO ALA ALA TYR HIS LYS LEU THR SEQRES 5 A 128 THR ARG ASP GLY PRO ARG GLU ALA THR LEU ASN SER GLY SEQRES 6 A 128 ASN GLY LYS ILE ARG PHE GLU VAL SER VAL ASN GLY LYS SEQRES 7 A 128 PRO SER ALA THR ASP ALA ARG LEU ALA PRO ILE ASN GLY SEQRES 8 A 128 LYS LYS SER ASP GLY SER PRO PHE THR VAL ASN PHE GLY SEQRES 9 A 128 ILE VAL VAL SER GLU ASP GLY HIS ASP SER ASP TYR ASN SEQRES 10 A 128 ASP GLY ILE VAL VAL LEU GLN TRP PRO ILE GLY HET MAN B 1 12 HET MAN B 2 11 HET MAN B 3 11 HET CA A 301 1 HET CA A 302 1 HET SO4 A 303 5 HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CA CALCIUM ION HETNAM SO4 SULFATE ION HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 MAN 3(C6 H12 O6) FORMUL 3 CA 2(CA 2+) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *178(H2 O) HELIX 1 2 THR A 52 GLY A 56 5 5 SHEET 1 AA 4 GLY A 11 SER A 14 0 SHEET 2 AA 4 LYS A 68 VAL A 75 -1 O ILE A 69 N PHE A 13 SHEET 3 AA 4 GLN A 33 ILE A 39 -1 O HIS A 34 N SER A 74 SHEET 4 AA 4 ALA A 47 LEU A 51 -1 O ALA A 47 N LEU A 37 SHEET 1 AB 7 ARG A 58 ASN A 63 0 SHEET 2 AB 7 ASP A 20 ALA A 27 -1 O PHE A 21 N LEU A 62 SHEET 3 AB 7 GLY A 119 TRP A 125 -1 O ILE A 120 N PHE A 26 SHEET 4 AB 7 PRO A 98 GLU A 109 -1 O ASN A 102 N TRP A 125 SHEET 5 AB 7 ALA A 81 LEU A 86 -1 O ALA A 81 N GLU A 109 SHEET 6 AB 7 PRO A 98 GLU A 109 -1 O ILE A 105 N ARG A 85 SHEET 7 AB 7 ILE A 89 LYS A 93 -1 O ILE A 89 N VAL A 101 LINK O3 MAN B 1 C1 MAN B 2 1555 1555 1.43 LINK O6 MAN B 1 C1 MAN B 3 1555 1555 1.44 LINK O ASN A 28 CA CA A 301 1555 1555 2.39 LINK OE1 GLU A 109 CA CA A 302 1555 1555 2.45 LINK OE2 GLU A 109 CA CA A 302 1555 1555 2.44 LINK OD1 ASP A 113 CA CA A 302 1555 1555 2.30 LINK OD1 ASP A 115 CA CA A 301 1555 1555 3.03 LINK OD2 ASP A 115 CA CA A 301 1555 1555 2.43 LINK OD1 ASP A 115 CA CA A 302 1555 1555 2.39 LINK OD1 ASN A 117 CA CA A 301 1555 1555 2.33 LINK OD1 ASP A 118 CA CA A 301 1555 1555 2.35 LINK OD2 ASP A 118 CA CA A 302 1555 1555 2.40 LINK OD1 ASP A 118 CA CA A 302 1555 1555 2.61 LINK O GLY A 128 CA CA A 301 5554 1555 2.38 LINK CA CA A 301 O2 MAN B 2 1555 1555 2.46 LINK CA CA A 301 O3 MAN B 2 1555 1555 2.46 LINK CA CA A 301 O2 MAN B 3 1555 5555 2.47 LINK CA CA A 301 O3 MAN B 3 1555 5555 2.51 LINK CA CA A 302 O3 MAN B 2 1555 1555 2.52 LINK CA CA A 302 O4 MAN B 2 1555 1555 2.48 LINK CA CA A 302 O3 MAN B 3 1555 5555 2.53 LINK CA CA A 302 O4 MAN B 3 1555 5555 2.52 CISPEP 1 TRP A 125 PRO A 126 0 -9.72 CRYST1 66.296 66.296 46.159 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015084 0.008709 0.000000 0.00000 SCALE2 0.000000 0.017417 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021664 0.00000