HEADER TRANSFERASE 04-SEP-09 2WSA TITLE CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) TITLE 2 WITH BOUND MYRISTOYL-COA AND A PYRAZOLE SULPHONAMIDE LIGAND TITLE 3 (DDD85646) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 5-421; COMPND 5 SYNONYM: N-MYRISTOYL TRANSFERASE; COMPND 6 EC: 2.3.1.97; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 5664; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACYLTRANSFERASE, TRANSFERASE, DRUG DISCOVERY EXPDTA X-RAY DIFFRACTION AUTHOR D.A.ROBINSON,S.BRAND,A.H.FAIRLAMB,M.A.J.FERGUSON,J.A.FREARSON, AUTHOR 2 P.G.WYATT,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 4 20-DEC-23 2WSA 1 REMARK REVDAT 3 12-OCT-11 2WSA 1 CAVEAT REMARK HETATM VERSN REVDAT 2 14-APR-10 2WSA 1 JRNL REVDAT 1 23-MAR-10 2WSA 0 JRNL AUTH J.A.FREARSON,S.BRAND,L.A.T.CLEGHORN,S.MCELROY,O.SMID, JRNL AUTH 2 L.STOJANOVSKI,L.TORRIE,D.A.ROBINSON,I.HALLYBURTON, JRNL AUTH 3 M.L.GUTHER,H.P.PRICE,C.P.MPAMHANGA,J.A.BRANNIGAN, JRNL AUTH 4 M.HODGKINSON,O.RAIMI,D.M.F.VAN AALTEN,R.BRENK,I.H.GILBERT, JRNL AUTH 5 K.D.READ,A.H.FAIRLAMB,M.A.J.FERGUSON,D.F.SMITH,P.G.WYATT JRNL TITL N-MYRISTOYLTRANSFERASE INHIBITORS AS NEW LEADS TO TREAT JRNL TITL 2 SLEEPING SICKNESS. JRNL REF NATURE V. 464 728 2010 JRNL REFN ISSN 0028-0836 JRNL PMID 20360736 JRNL DOI 10.1038/NATURE08893 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.P.PRICE,M.R.MENON,C.PANETHYMITAKI,D.GOULDING,P.G.MCKEAN, REMARK 1 AUTH 2 D.F.SMITH REMARK 1 TITL MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE, AN ESSENTIAL REMARK 1 TITL 2 ENZYME AND POTENTIAL DRUG TARGET IN KINETOPLASTID PARASITES. REMARK 1 REF J.BIOL.CHEM. V. 278 7206 2003 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 12488459 REMARK 1 DOI 10.1074/JBC.M211391200 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 52161 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1678 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3739 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.3180 REMARK 3 BIN FREE R VALUE SET COUNT : 107 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3346 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 95 REMARK 3 SOLVENT ATOMS : 556 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.10000 REMARK 3 B22 (A**2) : -0.88000 REMARK 3 B33 (A**2) : 0.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.44000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.801 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3551 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4845 ; 1.789 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 412 ; 6.207 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;32.965 ;23.779 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 559 ;15.051 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.652 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 506 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2751 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2070 ; 0.933 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3366 ; 1.629 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1481 ; 2.591 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1476 ; 3.890 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RESIDUES -16-10 ARE DISORDERED REMARK 4 REMARK 4 2WSA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1290041046. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.93340 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53906 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.100 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3H5Z REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25.9%PEG1500,0.2M NACL, 0.1M REMARK 280 NACACODYLATE, PH 5.6, PH 5.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.15850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -16 REMARK 465 GLY A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 SER A -6 REMARK 465 SER A -5 REMARK 465 GLY A -4 REMARK 465 ARG A -3 REMARK 465 GLU A -2 REMARK 465 ASN A -1 REMARK 465 LEU A 0 REMARK 465 TYR A 1 REMARK 465 PHE A 2 REMARK 465 GLN A 3 REMARK 465 GLY A 4 REMARK 465 PRO A 5 REMARK 465 SER A 6 REMARK 465 ASN A 7 REMARK 465 SER A 8 REMARK 465 ASP A 9 REMARK 465 ALA A 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 64 O REMARK 470 LYS A 241 CD CE NZ REMARK 470 LYS A 268 NZ REMARK 470 ASP A 316 O REMARK 470 SER A 336 OG REMARK 470 LYS A 412 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CLG 646 A 1423 O HOH A 2556 1.50 REMARK 500 CB SER A 257 O HOH A 2382 1.64 REMARK 500 CB SER A 298 O HOH A 2424 1.72 REMARK 500 O HOH A 2434 O HOH A 2435 1.85 REMARK 500 O HOH A 2435 O HOH A 2487 1.88 REMARK 500 O HOH A 2318 O HOH A 2319 1.88 REMARK 500 OD1 ASP A 27 O HOH A 2030 1.94 REMARK 500 CB GLN A 243 O HOH A 2359 1.98 REMARK 500 OE1 GLU A 48 O HOH A 2073 2.02 REMARK 500 O HOH A 2059 O HOH A 2066 2.03 REMARK 500 O HOH A 2359 O HOH A 2362 2.09 REMARK 500 O HOH A 2443 O HOH A 2444 2.10 REMARK 500 O HOH A 2193 O HOH A 2303 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2071 O HOH A 2327 2645 1.79 REMARK 500 O HOH A 2117 O HOH A 2379 2646 1.86 REMARK 500 O HOH A 2284 O HOH A 2359 2746 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 67 CB ASP A 67 CG 0.204 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 63 CB - CG - SD ANGL. DEV. = -22.1 DEGREES REMARK 500 ASP A 67 CB - CG - OD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 220 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 304 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 135 25.70 -147.16 REMARK 500 ILE A 163 -165.49 -126.45 REMARK 500 VAL A 307 -63.84 -128.19 REMARK 500 HIS A 347 -139.17 -103.51 REMARK 500 GLU A 379 39.12 -70.14 REMARK 500 LEU A 381 -139.55 50.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2007 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A2039 DISTANCE = 6.22 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MYA A 1422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 646 A 1423 DBREF 2WSA A -16 4 PDB 2WSA 2WSA -16 4 DBREF 2WSA A 5 421 UNP Q4Q5S8 Q4Q5S8_LEIMA 5 421 SEQADV 2WSA ASP A 27 UNP Q4Q5S8 THR 27 CONFLICT SEQRES 1 A 438 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 438 ARG GLU ASN LEU TYR PHE GLN GLY PRO SER ASN SER ASP SEQRES 3 A 438 ALA ALA HIS ALA PHE TRP SER THR GLN PRO VAL PRO GLN SEQRES 4 A 438 THR GLU ASP GLU ASP GLU LYS ILE VAL PHE ALA GLY PRO SEQRES 5 A 438 MET ASP GLU PRO LYS THR VAL ALA ASP ILE PRO GLU GLU SEQRES 6 A 438 PRO TYR PRO ILE ALA SER THR PHE GLU TRP TRP THR PRO SEQRES 7 A 438 ASN MET GLU ALA ALA ASP ASP ILE HIS ALA ILE TYR GLU SEQRES 8 A 438 LEU LEU ARG ASP ASN TYR VAL GLU ASP ASP ASP SER MET SEQRES 9 A 438 PHE ARG PHE ASN TYR SER GLU GLU PHE LEU GLN TRP ALA SEQRES 10 A 438 LEU CYS PRO PRO ASN TYR ILE PRO ASP TRP HIS VAL ALA SEQRES 11 A 438 VAL ARG ARG LYS ALA ASP LYS LYS LEU LEU ALA PHE ILE SEQRES 12 A 438 ALA GLY VAL PRO VAL THR LEU ARG MET GLY THR PRO LYS SEQRES 13 A 438 TYR MET LYS VAL LYS ALA GLN GLU LYS GLY GLU GLY GLU SEQRES 14 A 438 GLU ALA ALA LYS TYR ASP GLU PRO ARG HIS ILE CYS GLU SEQRES 15 A 438 ILE ASN PHE LEU CYS VAL HIS LYS GLN LEU ARG GLU LYS SEQRES 16 A 438 ARG LEU ALA PRO ILE LEU ILE LYS GLU ALA THR ARG ARG SEQRES 17 A 438 VAL ASN ARG THR ASN VAL TRP GLN ALA VAL TYR THR ALA SEQRES 18 A 438 GLY VAL LEU LEU PRO THR PRO TYR ALA SER GLY GLN TYR SEQRES 19 A 438 PHE HIS ARG SER LEU ASN PRO GLU LYS LEU VAL GLU ILE SEQRES 20 A 438 ARG PHE SER GLY ILE PRO ALA GLN TYR GLN LYS PHE GLN SEQRES 21 A 438 ASN PRO MET ALA MET LEU LYS ARG ASN TYR GLN LEU PRO SEQRES 22 A 438 SER ALA PRO LYS ASN SER GLY LEU ARG GLU MET LYS PRO SEQRES 23 A 438 SER ASP VAL PRO GLN VAL ARG ARG ILE LEU MET ASN TYR SEQRES 24 A 438 LEU ASP SER PHE ASP VAL GLY PRO VAL PHE SER ASP ALA SEQRES 25 A 438 GLU ILE SER HIS TYR LEU LEU PRO ARG ASP GLY VAL VAL SEQRES 26 A 438 PHE THR TYR VAL VAL GLU ASN ASP LYS LYS VAL THR ASP SEQRES 27 A 438 PHE PHE SER PHE TYR ARG ILE PRO SER THR VAL ILE GLY SEQRES 28 A 438 ASN SER ASN TYR ASN LEU LEU ASN ALA ALA TYR VAL HIS SEQRES 29 A 438 TYR TYR ALA ALA THR SER ILE PRO LEU HIS GLN LEU ILE SEQRES 30 A 438 LEU ASP LEU LEU ILE VAL ALA HIS SER ARG GLY PHE ASP SEQRES 31 A 438 VAL CYS ASN MET VAL GLU ILE LEU ASP ASN ARG SER PHE SEQRES 32 A 438 VAL GLU GLN LEU LYS PHE GLY ALA GLY ASP GLY HIS LEU SEQRES 33 A 438 ARG TYR TYR PHE TYR ASN TRP ALA TYR PRO LYS ILE LYS SEQRES 34 A 438 PRO SER GLN VAL ALA LEU VAL MET LEU HET MYA A1422 63 HET 646 A1423 32 HETNAM MYA TETRADECANOYL-COA HETNAM 646 2,6-DICHLORO-4-(2-PIPERAZIN-1-YLPYRIDIN-4-YL)-N-(1,3,5- HETNAM 2 646 TRIMETHYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE HETSYN MYA MYRISTOYL-COA FORMUL 2 MYA C35 H62 N7 O17 P3 S FORMUL 3 646 C21 H24 CL2 N6 O2 S FORMUL 4 HOH *556(H2 O) HELIX 1 1 PHE A 14 GLN A 18 5 5 HELIX 2 2 THR A 23 LYS A 29 1 7 HELIX 3 3 THR A 41 ILE A 45 5 5 HELIX 4 4 ALA A 65 TYR A 80 1 16 HELIX 5 5 SER A 93 CYS A 102 1 10 HELIX 6 6 ILE A 107 ASP A 109 5 3 HELIX 7 7 PRO A 138 LYS A 148 1 11 HELIX 8 8 GLU A 150 LYS A 156 1 7 HELIX 9 9 LYS A 173 ARG A 176 5 4 HELIX 10 10 ARG A 179 ARG A 194 1 16 HELIX 11 11 ASN A 223 ILE A 230 1 8 HELIX 12 12 PRO A 236 PHE A 242 5 7 HELIX 13 13 ASN A 244 GLN A 254 1 11 HELIX 14 14 LYS A 268 SER A 270 5 3 HELIX 15 15 ASP A 271 ASP A 284 1 14 HELIX 16 16 SER A 293 LEU A 302 1 10 HELIX 17 17 PRO A 355 ARG A 370 1 16 HELIX 18 18 ASP A 382 VAL A 387 5 6 HELIX 19 19 LYS A 412 VAL A 416 5 5 SHEET 1 A12 PHE A 56 TRP A 59 0 SHEET 2 A12 HIS A 111 ARG A 116 -1 O ALA A 113 N TRP A 59 SHEET 3 A12 LEU A 122 ARG A 134 -1 O LEU A 123 N VAL A 114 SHEET 4 A12 ARG A 161 VAL A 171 -1 O ARG A 161 N LEU A 133 SHEET 5 A12 ALA A 200 ALA A 204 1 O VAL A 201 N CYS A 164 SHEET 6 A12 GLY A 393 TYR A 404 -1 O ARG A 400 N ALA A 204 SHEET 7 A12 ALA A 213 SER A 221 -1 N ALA A 213 O TYR A 401 SHEET 8 A12 VAL A 374 VAL A 378 -1 O MET A 377 N PHE A 218 SHEET 9 A12 LEU A 340 ALA A 351 1 N ALA A 344 O ASN A 376 SHEET 10 A12 LYS A 318 VAL A 332 -1 N TYR A 326 O TYR A 345 SHEET 11 A12 VAL A 308 ASN A 315 -1 N PHE A 309 O PHE A 325 SHEET 12 A12 LEU A 264 GLU A 266 -1 N ARG A 265 O VAL A 312 SHEET 1 B10 PHE A 88 PHE A 90 0 SHEET 2 B10 LYS A 318 VAL A 332 -1 O THR A 331 N ARG A 89 SHEET 3 B10 LEU A 340 ALA A 351 -1 O TYR A 345 N TYR A 326 SHEET 4 B10 VAL A 374 VAL A 378 1 O ASN A 376 N ALA A 344 SHEET 5 B10 ALA A 213 SER A 221 -1 N PHE A 218 O MET A 377 SHEET 6 B10 GLY A 393 TYR A 404 -1 O TYR A 401 N ALA A 213 SHEET 7 B10 ALA A 200 ALA A 204 -1 N ALA A 204 O ARG A 400 SHEET 8 B10 ARG A 161 VAL A 171 1 N CYS A 164 O VAL A 201 SHEET 9 B10 LEU A 122 ARG A 134 -1 N LEU A 133 O ARG A 161 SHEET 10 B10 GLY A 289 PRO A 290 -1 O GLY A 289 N ARG A 134 CISPEP 1 PRO A 209 THR A 210 0 -10.11 SITE 1 AC1 36 HIS A 12 ALA A 13 PHE A 14 TRP A 15 SITE 2 AC1 36 ASN A 79 TYR A 80 VAL A 81 PHE A 168 SITE 3 AC1 36 LEU A 169 CYS A 170 VAL A 171 ARG A 176 SITE 4 AC1 36 GLU A 177 LYS A 178 ARG A 179 LEU A 180 SITE 5 AC1 36 ALA A 181 PRO A 182 THR A 189 VAL A 192 SITE 6 AC1 36 ASN A 193 TRP A 198 TYR A 202 THR A 203 SITE 7 AC1 36 LEU A 208 TYR A 404 HOH A2287 HOH A2544 SITE 8 AC1 36 HOH A2545 HOH A2546 HOH A2547 HOH A2548 SITE 9 AC1 36 HOH A2549 HOH A2551 HOH A2552 HOH A2553 SITE 1 AC2 22 VAL A 81 PHE A 88 PHE A 90 ASN A 167 SITE 2 AC2 22 THR A 203 GLY A 205 TYR A 217 HIS A 219 SITE 3 AC2 22 PHE A 232 SER A 330 TYR A 345 ASN A 376 SITE 4 AC2 22 ASP A 396 LEU A 399 LEU A 421 HOH A2139 SITE 5 AC2 22 HOH A2318 HOH A2332 HOH A2492 HOH A2554 SITE 6 AC2 22 HOH A2555 HOH A2556 CRYST1 47.510 90.317 52.972 90.00 112.27 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021048 0.000000 0.008620 0.00000 SCALE2 0.000000 0.011072 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020400 0.00000