HEADER TRANSFERASE 25-SEP-09 2WTX TITLE INSIGHT INTO THE MECHANISM OF ENZYMATIC GLYCOSYLTRANSFER WITH TITLE 2 RETENTION THROUGH THE SYNTHESIS AND ANALYSIS OF BISUBSTRATE TITLE 3 GLYCOMIMETICS OF TREHALOSE-6-PHOSPHATE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA, ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING]; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: TREHALOSE-6-PHOSPHATE SYNTHASE, UDP-GLUCOSE-GLUCOSEPHOSPHATE COMPND 5 GLUCOSYLTRANSFERASE, OSMOREGULATORY TREHALOSE SYNTHESIS PROTEIN A; COMPND 6 EC: 2.4.1.15; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TREHALOSE SYNTHASE, GLYCOSYLTRANSFERASE, POTASSIUM, RETENTION, KEYWDS 2 TRANSFERASE, STRESS RESPONSE EXPDTA X-RAY DIFFRACTION AUTHOR J.C.ERREY,S.S.LEE,R.P.GIBSON,C.MARTINEZ-FLEITES,C.S.BARRY,P.M.J.JUNG, AUTHOR 2 A.OSULLIVAN,B.G.DAVIS,G.J.DAVIES REVDAT 2 20-DEC-23 2WTX 1 REMARK REVDAT 1 23-FEB-10 2WTX 0 JRNL AUTH J.C.ERREY,S.S.LEE,R.P.GIBSON,C.MARTINEZ FLEITES,C.S.BARRY, JRNL AUTH 2 P.M.J.JUNG,A.C.O'SULLIVAN,B.G.DAVIS,G.J.DAVIES JRNL TITL MECHANISTIC INSIGHT INTO ENZYMATIC GLYCOSYL TRANSFER WITH JRNL TITL 2 RETENTION OF CONFIGURATION THROUGH ANALYSIS OF GLYCOMIMETIC JRNL TITL 3 INHIBITORS. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 49 1234 2010 JRNL REFN ISSN 1433-7851 JRNL PMID 20077550 JRNL DOI 10.1002/ANIE.200905096 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 98.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 105869 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5583 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7591 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 427 REMARK 3 BIN FREE R VALUE : 0.2910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 14489 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 228 REMARK 3 SOLVENT ATOMS : 585 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : -0.05000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.257 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.200 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.365 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.911 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 15182 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 20670 ; 1.432 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1817 ; 5.799 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 739 ;37.758 ;23.911 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2472 ;18.910 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 105 ;16.867 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2264 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11618 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 9067 ; 0.661 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 14580 ; 1.271 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6115 ; 1.869 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 6085 ; 3.083 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 2WTX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-SEP-09. REMARK 100 THE DEPOSITION ID IS D_1290041251. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97910 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 111567 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 99.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1GZ5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 52.25750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.89300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.14350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 86.89300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.25750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.14350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 457 REMARK 465 ALA A 458 REMARK 465 GLU A 459 REMARK 465 SER A 460 REMARK 465 GLN A 461 REMARK 465 GLN A 462 REMARK 465 ARG A 463 REMARK 465 ASP A 464 REMARK 465 LYS A 465 REMARK 465 VAL A 466 REMARK 465 ALA A 467 REMARK 465 THR A 468 REMARK 465 PHE A 469 REMARK 465 PRO A 470 REMARK 465 LYS A 471 REMARK 465 LEU A 472 REMARK 465 ALA A 473 REMARK 465 MET B 0 REMARK 465 GLU B 15 REMARK 465 HIS B 16 REMARK 465 ALA B 17 REMARK 465 ALA B 18 REMARK 465 GLU B 459 REMARK 465 SER B 460 REMARK 465 GLN B 461 REMARK 465 GLN B 462 REMARK 465 ARG B 463 REMARK 465 ASP B 464 REMARK 465 LYS B 465 REMARK 465 VAL B 466 REMARK 465 ALA B 467 REMARK 465 THR B 468 REMARK 465 PHE B 469 REMARK 465 PRO B 470 REMARK 465 LYS B 471 REMARK 465 LEU B 472 REMARK 465 ALA B 473 REMARK 465 MET C 0 REMARK 465 PRO C 13 REMARK 465 ASP C 14 REMARK 465 GLU C 15 REMARK 465 HIS C 16 REMARK 465 ALA C 17 REMARK 465 ALA C 18 REMARK 465 SER C 19 REMARK 465 ALA C 20 REMARK 465 GLY C 21 REMARK 465 GLU C 48 REMARK 465 ASP C 49 REMARK 465 LEU C 240 REMARK 465 PRO C 241 REMARK 465 PRO C 242 REMARK 465 LYS C 243 REMARK 465 LEU C 244 REMARK 465 SER C 457 REMARK 465 ALA C 458 REMARK 465 GLU C 459 REMARK 465 SER C 460 REMARK 465 GLN C 461 REMARK 465 GLN C 462 REMARK 465 ARG C 463 REMARK 465 ASP C 464 REMARK 465 LYS C 465 REMARK 465 VAL C 466 REMARK 465 ALA C 467 REMARK 465 THR C 468 REMARK 465 PHE C 469 REMARK 465 PRO C 470 REMARK 465 LYS C 471 REMARK 465 LEU C 472 REMARK 465 ALA C 473 REMARK 465 MET D 0 REMARK 465 ALA D 458 REMARK 465 GLU D 459 REMARK 465 SER D 460 REMARK 465 GLN D 461 REMARK 465 GLN D 462 REMARK 465 ARG D 463 REMARK 465 ASP D 464 REMARK 465 LYS D 465 REMARK 465 VAL D 466 REMARK 465 ALA D 467 REMARK 465 THR D 468 REMARK 465 PHE D 469 REMARK 465 PRO D 470 REMARK 465 LYS D 471 REMARK 465 LEU D 472 REMARK 465 ALA D 473 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU C 261 NH2 ARG C 272 2.14 REMARK 500 OE2 GLU D 261 NH2 ARG D 272 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS B 209 CE LYS B 209 NZ -0.164 REMARK 500 LYS B 209 C LYS B 209 O -0.116 REMARK 500 LEU C 31 N LEU C 31 CA -0.124 REMARK 500 ALA C 33 CA ALA C 33 CB -0.138 REMARK 500 ALA C 34 CA ALA C 34 CB -0.151 REMARK 500 GLY C 35 C GLY C 35 O -0.100 REMARK 500 ARG D 206 CZ ARG D 206 NH2 -0.090 REMARK 500 ALA D 208 N ALA D 208 CA -0.178 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 111 CA - CB - CG ANGL. DEV. = 20.3 DEGREES REMARK 500 LEU B 111 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 ARG B 206 NE - CZ - NH1 ANGL. DEV. = 6.8 DEGREES REMARK 500 ARG B 206 NE - CZ - NH2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ALA B 208 C - N - CA ANGL. DEV. = -17.1 DEGREES REMARK 500 LEU C 31 CB - CG - CD1 ANGL. DEV. = 11.1 DEGREES REMARK 500 LEU C 31 CB - CG - CD2 ANGL. DEV. = -17.2 DEGREES REMARK 500 ALA C 34 N - CA - C ANGL. DEV. = -18.2 DEGREES REMARK 500 SER D 207 CB - CA - C ANGL. DEV. = 18.4 DEGREES REMARK 500 SER D 207 CA - C - N ANGL. DEV. = 17.9 DEGREES REMARK 500 ALA D 208 N - CA - CB ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG D 272 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 76 -62.86 -91.30 REMARK 500 GLN A 78 -68.96 -90.26 REMARK 500 VAL A 83 -60.49 -124.85 REMARK 500 ASP A 130 172.90 81.55 REMARK 500 MET A 363 -66.27 -145.32 REMARK 500 ASN A 364 99.73 89.99 REMARK 500 ASN A 378 67.67 -157.87 REMARK 500 ASN A 437 67.70 -117.91 REMARK 500 ASN B 8 -72.25 -62.23 REMARK 500 GLN B 78 -72.92 -77.80 REMARK 500 VAL B 83 -60.16 -126.17 REMARK 500 GLN B 96 69.85 -118.66 REMARK 500 ASP B 130 169.84 83.79 REMARK 500 SER B 207 -129.86 63.78 REMARK 500 TRP B 214 28.54 46.43 REMARK 500 ALA B 249 26.12 -78.15 REMARK 500 LEU B 251 37.08 -93.65 REMARK 500 MET B 363 -65.65 -143.86 REMARK 500 ASN B 364 90.85 93.21 REMARK 500 ASN B 378 64.24 -155.47 REMARK 500 ASN B 437 58.08 -114.37 REMARK 500 ASP B 438 153.99 -43.40 REMARK 500 LYS C 57 80.07 -152.81 REMARK 500 TYR C 76 -64.39 -95.27 REMARK 500 GLN C 78 -72.98 -91.11 REMARK 500 ARG C 91 67.08 -114.66 REMARK 500 ASP C 130 168.20 86.55 REMARK 500 ALA C 296 83.53 -152.65 REMARK 500 MET C 363 -56.11 -138.88 REMARK 500 ASN C 364 91.29 77.28 REMARK 500 ASN C 437 70.31 -100.03 REMARK 500 TYR D 76 -65.60 -93.77 REMARK 500 GLN D 78 -62.99 -92.76 REMARK 500 GLN D 96 74.35 -117.64 REMARK 500 ASP D 130 172.42 82.37 REMARK 500 SER D 207 -140.66 62.73 REMARK 500 ALA D 208 -102.36 117.17 REMARK 500 TRP D 329 116.18 -160.80 REMARK 500 MET D 363 -64.26 -143.41 REMARK 500 ASN D 364 95.46 84.49 REMARK 500 ASN D 378 78.84 -151.90 REMARK 500 ASN D 437 53.75 -105.36 REMARK 500 ASP D 438 158.93 -43.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 208 LYS B 209 -143.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1457 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1459 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1458 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1459 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1460 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 1460 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VDO A 1461 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP B 1461 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VDO B 1462 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP C 1457 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VDO C 1458 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP D 1458 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VDO D 1459 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GZ5 RELATED DB: PDB REMARK 900 TREHALOSE-6-PHOSPHATE SYNTHASE. OTSA REMARK 900 RELATED ID: 1UQU RELATED DB: PDB REMARK 900 TREHALOSE-6-PHOSPHATE FROM E. COLI BOUND WITH UDP-GLUCOSE. REMARK 900 RELATED ID: 1UQT RELATED DB: PDB REMARK 900 TREHALOSE-6-PHOSPHATE FROM E. COLI BOUND WITH UDP-2-FLUORO GLUCOSE. DBREF 2WTX A 0 473 UNP P31677 OTSA_ECOLI 1 474 DBREF 2WTX B 0 473 UNP P31677 OTSA_ECOLI 1 474 DBREF 2WTX C 0 473 UNP P31677 OTSA_ECOLI 1 474 DBREF 2WTX D 0 473 UNP P31677 OTSA_ECOLI 1 474 SEQRES 1 A 474 MET SER ARG LEU VAL VAL VAL SER ASN ARG ILE ALA PRO SEQRES 2 A 474 PRO ASP GLU HIS ALA ALA SER ALA GLY GLY LEU ALA VAL SEQRES 3 A 474 GLY ILE LEU GLY ALA LEU LYS ALA ALA GLY GLY LEU TRP SEQRES 4 A 474 PHE GLY TRP SER GLY GLU THR GLY ASN GLU ASP GLN PRO SEQRES 5 A 474 LEU LYS LYS VAL LYS LYS GLY ASN ILE THR TRP ALA SER SEQRES 6 A 474 PHE ASN LEU SER GLU GLN ASP LEU ASP GLU TYR TYR ASN SEQRES 7 A 474 GLN PHE SER ASN ALA VAL LEU TRP PRO ALA PHE HIS TYR SEQRES 8 A 474 ARG LEU ASP LEU VAL GLN PHE GLN ARG PRO ALA TRP ASP SEQRES 9 A 474 GLY TYR LEU ARG VAL ASN ALA LEU LEU ALA ASP LYS LEU SEQRES 10 A 474 LEU PRO LEU LEU GLN ASP ASP ASP ILE ILE TRP ILE HIS SEQRES 11 A 474 ASP TYR HIS LEU LEU PRO PHE ALA HIS GLU LEU ARG LYS SEQRES 12 A 474 ARG GLY VAL ASN ASN ARG ILE GLY PHE PHE LEU HIS ILE SEQRES 13 A 474 PRO PHE PRO THR PRO GLU ILE PHE ASN ALA LEU PRO THR SEQRES 14 A 474 TYR ASP THR LEU LEU GLU GLN LEU CYS ASP TYR ASP LEU SEQRES 15 A 474 LEU GLY PHE GLN THR GLU ASN ASP ARG LEU ALA PHE LEU SEQRES 16 A 474 ASP CYS LEU SER ASN LEU THR ARG VAL THR THR ARG SER SEQRES 17 A 474 ALA LYS SER HIS THR ALA TRP GLY LYS ALA PHE ARG THR SEQRES 18 A 474 GLU VAL TYR PRO ILE GLY ILE GLU PRO LYS GLU ILE ALA SEQRES 19 A 474 LYS GLN ALA ALA GLY PRO LEU PRO PRO LYS LEU ALA GLN SEQRES 20 A 474 LEU LYS ALA GLU LEU LYS ASN VAL GLN ASN ILE PHE SER SEQRES 21 A 474 VAL GLU ARG LEU ASP TYR SER LYS GLY LEU PRO GLU ARG SEQRES 22 A 474 PHE LEU ALA TYR GLU ALA LEU LEU GLU LYS TYR PRO GLN SEQRES 23 A 474 HIS HIS GLY LYS ILE ARG TYR THR GLN ILE ALA PRO THR SEQRES 24 A 474 SER ARG GLY ASP VAL GLN ALA TYR GLN ASP ILE ARG HIS SEQRES 25 A 474 GLN LEU GLU ASN GLU ALA GLY ARG ILE ASN GLY LYS TYR SEQRES 26 A 474 GLY GLN LEU GLY TRP THR PRO LEU TYR TYR LEU ASN GLN SEQRES 27 A 474 HIS PHE ASP ARG LYS LEU LEU MET LYS ILE PHE ARG TYR SEQRES 28 A 474 SER ASP VAL GLY LEU VAL THR PRO LEU ARG ASP GLY MET SEQRES 29 A 474 ASN LEU VAL ALA LYS GLU TYR VAL ALA ALA GLN ASP PRO SEQRES 30 A 474 ALA ASN PRO GLY VAL LEU VAL LEU SER GLN PHE ALA GLY SEQRES 31 A 474 ALA ALA ASN GLU LEU THR SER ALA LEU ILE VAL ASN PRO SEQRES 32 A 474 TYR ASP ARG ASP GLU VAL ALA ALA ALA LEU ASP ARG ALA SEQRES 33 A 474 LEU THR MET SER LEU ALA GLU ARG ILE SER ARG HIS ALA SEQRES 34 A 474 GLU MET LEU ASP VAL ILE VAL LYS ASN ASP ILE ASN HIS SEQRES 35 A 474 TRP GLN GLU CYS PHE ILE SER ASP LEU LYS GLN ILE VAL SEQRES 36 A 474 PRO ARG SER ALA GLU SER GLN GLN ARG ASP LYS VAL ALA SEQRES 37 A 474 THR PHE PRO LYS LEU ALA SEQRES 1 B 474 MET SER ARG LEU VAL VAL VAL SER ASN ARG ILE ALA PRO SEQRES 2 B 474 PRO ASP GLU HIS ALA ALA SER ALA GLY GLY LEU ALA VAL SEQRES 3 B 474 GLY ILE LEU GLY ALA LEU LYS ALA ALA GLY GLY LEU TRP SEQRES 4 B 474 PHE GLY TRP SER GLY GLU THR GLY ASN GLU ASP GLN PRO SEQRES 5 B 474 LEU LYS LYS VAL LYS LYS GLY ASN ILE THR TRP ALA SER SEQRES 6 B 474 PHE ASN LEU SER GLU GLN ASP LEU ASP GLU TYR TYR ASN SEQRES 7 B 474 GLN PHE SER ASN ALA VAL LEU TRP PRO ALA PHE HIS TYR SEQRES 8 B 474 ARG LEU ASP LEU VAL GLN PHE GLN ARG PRO ALA TRP ASP SEQRES 9 B 474 GLY TYR LEU ARG VAL ASN ALA LEU LEU ALA ASP LYS LEU SEQRES 10 B 474 LEU PRO LEU LEU GLN ASP ASP ASP ILE ILE TRP ILE HIS SEQRES 11 B 474 ASP TYR HIS LEU LEU PRO PHE ALA HIS GLU LEU ARG LYS SEQRES 12 B 474 ARG GLY VAL ASN ASN ARG ILE GLY PHE PHE LEU HIS ILE SEQRES 13 B 474 PRO PHE PRO THR PRO GLU ILE PHE ASN ALA LEU PRO THR SEQRES 14 B 474 TYR ASP THR LEU LEU GLU GLN LEU CYS ASP TYR ASP LEU SEQRES 15 B 474 LEU GLY PHE GLN THR GLU ASN ASP ARG LEU ALA PHE LEU SEQRES 16 B 474 ASP CYS LEU SER ASN LEU THR ARG VAL THR THR ARG SER SEQRES 17 B 474 ALA LYS SER HIS THR ALA TRP GLY LYS ALA PHE ARG THR SEQRES 18 B 474 GLU VAL TYR PRO ILE GLY ILE GLU PRO LYS GLU ILE ALA SEQRES 19 B 474 LYS GLN ALA ALA GLY PRO LEU PRO PRO LYS LEU ALA GLN SEQRES 20 B 474 LEU LYS ALA GLU LEU LYS ASN VAL GLN ASN ILE PHE SER SEQRES 21 B 474 VAL GLU ARG LEU ASP TYR SER LYS GLY LEU PRO GLU ARG SEQRES 22 B 474 PHE LEU ALA TYR GLU ALA LEU LEU GLU LYS TYR PRO GLN SEQRES 23 B 474 HIS HIS GLY LYS ILE ARG TYR THR GLN ILE ALA PRO THR SEQRES 24 B 474 SER ARG GLY ASP VAL GLN ALA TYR GLN ASP ILE ARG HIS SEQRES 25 B 474 GLN LEU GLU ASN GLU ALA GLY ARG ILE ASN GLY LYS TYR SEQRES 26 B 474 GLY GLN LEU GLY TRP THR PRO LEU TYR TYR LEU ASN GLN SEQRES 27 B 474 HIS PHE ASP ARG LYS LEU LEU MET LYS ILE PHE ARG TYR SEQRES 28 B 474 SER ASP VAL GLY LEU VAL THR PRO LEU ARG ASP GLY MET SEQRES 29 B 474 ASN LEU VAL ALA LYS GLU TYR VAL ALA ALA GLN ASP PRO SEQRES 30 B 474 ALA ASN PRO GLY VAL LEU VAL LEU SER GLN PHE ALA GLY SEQRES 31 B 474 ALA ALA ASN GLU LEU THR SER ALA LEU ILE VAL ASN PRO SEQRES 32 B 474 TYR ASP ARG ASP GLU VAL ALA ALA ALA LEU ASP ARG ALA SEQRES 33 B 474 LEU THR MET SER LEU ALA GLU ARG ILE SER ARG HIS ALA SEQRES 34 B 474 GLU MET LEU ASP VAL ILE VAL LYS ASN ASP ILE ASN HIS SEQRES 35 B 474 TRP GLN GLU CYS PHE ILE SER ASP LEU LYS GLN ILE VAL SEQRES 36 B 474 PRO ARG SER ALA GLU SER GLN GLN ARG ASP LYS VAL ALA SEQRES 37 B 474 THR PHE PRO LYS LEU ALA SEQRES 1 C 474 MET SER ARG LEU VAL VAL VAL SER ASN ARG ILE ALA PRO SEQRES 2 C 474 PRO ASP GLU HIS ALA ALA SER ALA GLY GLY LEU ALA VAL SEQRES 3 C 474 GLY ILE LEU GLY ALA LEU LYS ALA ALA GLY GLY LEU TRP SEQRES 4 C 474 PHE GLY TRP SER GLY GLU THR GLY ASN GLU ASP GLN PRO SEQRES 5 C 474 LEU LYS LYS VAL LYS LYS GLY ASN ILE THR TRP ALA SER SEQRES 6 C 474 PHE ASN LEU SER GLU GLN ASP LEU ASP GLU TYR TYR ASN SEQRES 7 C 474 GLN PHE SER ASN ALA VAL LEU TRP PRO ALA PHE HIS TYR SEQRES 8 C 474 ARG LEU ASP LEU VAL GLN PHE GLN ARG PRO ALA TRP ASP SEQRES 9 C 474 GLY TYR LEU ARG VAL ASN ALA LEU LEU ALA ASP LYS LEU SEQRES 10 C 474 LEU PRO LEU LEU GLN ASP ASP ASP ILE ILE TRP ILE HIS SEQRES 11 C 474 ASP TYR HIS LEU LEU PRO PHE ALA HIS GLU LEU ARG LYS SEQRES 12 C 474 ARG GLY VAL ASN ASN ARG ILE GLY PHE PHE LEU HIS ILE SEQRES 13 C 474 PRO PHE PRO THR PRO GLU ILE PHE ASN ALA LEU PRO THR SEQRES 14 C 474 TYR ASP THR LEU LEU GLU GLN LEU CYS ASP TYR ASP LEU SEQRES 15 C 474 LEU GLY PHE GLN THR GLU ASN ASP ARG LEU ALA PHE LEU SEQRES 16 C 474 ASP CYS LEU SER ASN LEU THR ARG VAL THR THR ARG SER SEQRES 17 C 474 ALA LYS SER HIS THR ALA TRP GLY LYS ALA PHE ARG THR SEQRES 18 C 474 GLU VAL TYR PRO ILE GLY ILE GLU PRO LYS GLU ILE ALA SEQRES 19 C 474 LYS GLN ALA ALA GLY PRO LEU PRO PRO LYS LEU ALA GLN SEQRES 20 C 474 LEU LYS ALA GLU LEU LYS ASN VAL GLN ASN ILE PHE SER SEQRES 21 C 474 VAL GLU ARG LEU ASP TYR SER LYS GLY LEU PRO GLU ARG SEQRES 22 C 474 PHE LEU ALA TYR GLU ALA LEU LEU GLU LYS TYR PRO GLN SEQRES 23 C 474 HIS HIS GLY LYS ILE ARG TYR THR GLN ILE ALA PRO THR SEQRES 24 C 474 SER ARG GLY ASP VAL GLN ALA TYR GLN ASP ILE ARG HIS SEQRES 25 C 474 GLN LEU GLU ASN GLU ALA GLY ARG ILE ASN GLY LYS TYR SEQRES 26 C 474 GLY GLN LEU GLY TRP THR PRO LEU TYR TYR LEU ASN GLN SEQRES 27 C 474 HIS PHE ASP ARG LYS LEU LEU MET LYS ILE PHE ARG TYR SEQRES 28 C 474 SER ASP VAL GLY LEU VAL THR PRO LEU ARG ASP GLY MET SEQRES 29 C 474 ASN LEU VAL ALA LYS GLU TYR VAL ALA ALA GLN ASP PRO SEQRES 30 C 474 ALA ASN PRO GLY VAL LEU VAL LEU SER GLN PHE ALA GLY SEQRES 31 C 474 ALA ALA ASN GLU LEU THR SER ALA LEU ILE VAL ASN PRO SEQRES 32 C 474 TYR ASP ARG ASP GLU VAL ALA ALA ALA LEU ASP ARG ALA SEQRES 33 C 474 LEU THR MET SER LEU ALA GLU ARG ILE SER ARG HIS ALA SEQRES 34 C 474 GLU MET LEU ASP VAL ILE VAL LYS ASN ASP ILE ASN HIS SEQRES 35 C 474 TRP GLN GLU CYS PHE ILE SER ASP LEU LYS GLN ILE VAL SEQRES 36 C 474 PRO ARG SER ALA GLU SER GLN GLN ARG ASP LYS VAL ALA SEQRES 37 C 474 THR PHE PRO LYS LEU ALA SEQRES 1 D 474 MET SER ARG LEU VAL VAL VAL SER ASN ARG ILE ALA PRO SEQRES 2 D 474 PRO ASP GLU HIS ALA ALA SER ALA GLY GLY LEU ALA VAL SEQRES 3 D 474 GLY ILE LEU GLY ALA LEU LYS ALA ALA GLY GLY LEU TRP SEQRES 4 D 474 PHE GLY TRP SER GLY GLU THR GLY ASN GLU ASP GLN PRO SEQRES 5 D 474 LEU LYS LYS VAL LYS LYS GLY ASN ILE THR TRP ALA SER SEQRES 6 D 474 PHE ASN LEU SER GLU GLN ASP LEU ASP GLU TYR TYR ASN SEQRES 7 D 474 GLN PHE SER ASN ALA VAL LEU TRP PRO ALA PHE HIS TYR SEQRES 8 D 474 ARG LEU ASP LEU VAL GLN PHE GLN ARG PRO ALA TRP ASP SEQRES 9 D 474 GLY TYR LEU ARG VAL ASN ALA LEU LEU ALA ASP LYS LEU SEQRES 10 D 474 LEU PRO LEU LEU GLN ASP ASP ASP ILE ILE TRP ILE HIS SEQRES 11 D 474 ASP TYR HIS LEU LEU PRO PHE ALA HIS GLU LEU ARG LYS SEQRES 12 D 474 ARG GLY VAL ASN ASN ARG ILE GLY PHE PHE LEU HIS ILE SEQRES 13 D 474 PRO PHE PRO THR PRO GLU ILE PHE ASN ALA LEU PRO THR SEQRES 14 D 474 TYR ASP THR LEU LEU GLU GLN LEU CYS ASP TYR ASP LEU SEQRES 15 D 474 LEU GLY PHE GLN THR GLU ASN ASP ARG LEU ALA PHE LEU SEQRES 16 D 474 ASP CYS LEU SER ASN LEU THR ARG VAL THR THR ARG SER SEQRES 17 D 474 ALA LYS SER HIS THR ALA TRP GLY LYS ALA PHE ARG THR SEQRES 18 D 474 GLU VAL TYR PRO ILE GLY ILE GLU PRO LYS GLU ILE ALA SEQRES 19 D 474 LYS GLN ALA ALA GLY PRO LEU PRO PRO LYS LEU ALA GLN SEQRES 20 D 474 LEU LYS ALA GLU LEU LYS ASN VAL GLN ASN ILE PHE SER SEQRES 21 D 474 VAL GLU ARG LEU ASP TYR SER LYS GLY LEU PRO GLU ARG SEQRES 22 D 474 PHE LEU ALA TYR GLU ALA LEU LEU GLU LYS TYR PRO GLN SEQRES 23 D 474 HIS HIS GLY LYS ILE ARG TYR THR GLN ILE ALA PRO THR SEQRES 24 D 474 SER ARG GLY ASP VAL GLN ALA TYR GLN ASP ILE ARG HIS SEQRES 25 D 474 GLN LEU GLU ASN GLU ALA GLY ARG ILE ASN GLY LYS TYR SEQRES 26 D 474 GLY GLN LEU GLY TRP THR PRO LEU TYR TYR LEU ASN GLN SEQRES 27 D 474 HIS PHE ASP ARG LYS LEU LEU MET LYS ILE PHE ARG TYR SEQRES 28 D 474 SER ASP VAL GLY LEU VAL THR PRO LEU ARG ASP GLY MET SEQRES 29 D 474 ASN LEU VAL ALA LYS GLU TYR VAL ALA ALA GLN ASP PRO SEQRES 30 D 474 ALA ASN PRO GLY VAL LEU VAL LEU SER GLN PHE ALA GLY SEQRES 31 D 474 ALA ALA ASN GLU LEU THR SER ALA LEU ILE VAL ASN PRO SEQRES 32 D 474 TYR ASP ARG ASP GLU VAL ALA ALA ALA LEU ASP ARG ALA SEQRES 33 D 474 LEU THR MET SER LEU ALA GLU ARG ILE SER ARG HIS ALA SEQRES 34 D 474 GLU MET LEU ASP VAL ILE VAL LYS ASN ASP ILE ASN HIS SEQRES 35 D 474 TRP GLN GLU CYS PHE ILE SER ASP LEU LYS GLN ILE VAL SEQRES 36 D 474 PRO ARG SER ALA GLU SER GLN GLN ARG ASP LYS VAL ALA SEQRES 37 D 474 THR PHE PRO LYS LEU ALA HET EDO A1457 4 HET EDO A1458 4 HET EDO A1459 4 HET UDP A1460 25 HET VDO A1461 27 HET EDO B1459 4 HET EDO B1460 4 HET UDP B1461 25 HET VDO B1462 27 HET UDP C1457 25 HET VDO C1458 27 HET UDP D1458 25 HET VDO D1459 27 HETNAM EDO 1,2-ETHANEDIOL HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM VDO [(1R,2R,3S,4S,5S)-2,3,4-TRIHYDROXY-5-{[(1S,4R,5S,6S)-4, HETNAM 2 VDO 5,6-TRIHYDROXY-3-(HYDROXYMETHYL)CYCLOHEX-2-EN-1- HETNAM 3 VDO YL]AMINO}CYCLOHEXYL]METHYL DIHYDROGEN PHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 EDO 5(C2 H6 O2) FORMUL 8 UDP 4(C9 H14 N2 O12 P2) FORMUL 9 VDO 4(C14 H26 N O11 P) FORMUL 18 HOH *585(H2 O) HELIX 1 1 SER A 68 TYR A 75 1 8 HELIX 2 2 GLN A 78 VAL A 83 1 6 HELIX 3 3 VAL A 83 HIS A 89 1 7 HELIX 4 4 ARG A 91 VAL A 95 5 5 HELIX 5 5 GLN A 98 ASP A 103 1 6 HELIX 6 6 TYR A 105 LEU A 117 1 13 HELIX 7 7 PRO A 118 LEU A 120 5 3 HELIX 8 8 ASP A 130 LEU A 134 5 5 HELIX 9 9 PRO A 135 ARG A 143 1 9 HELIX 10 10 THR A 159 ASN A 164 1 6 HELIX 11 11 THR A 168 CYS A 177 1 10 HELIX 12 12 THR A 186 THR A 201 1 16 HELIX 13 13 GLU A 228 ALA A 237 1 10 HELIX 14 14 LEU A 244 LEU A 251 1 8 HELIX 15 15 LEU A 269 TYR A 283 1 15 HELIX 16 16 PRO A 284 HIS A 287 5 4 HELIX 17 17 VAL A 303 ALA A 317 1 15 HELIX 18 18 ASP A 340 SER A 351 1 12 HELIX 19 19 ASN A 364 ALA A 373 1 10 HELIX 20 20 ASP A 404 MET A 418 1 15 HELIX 21 21 SER A 419 ASN A 437 1 19 HELIX 22 22 ASP A 438 GLN A 452 1 15 HELIX 23 23 SER B 68 TYR B 76 1 9 HELIX 24 24 GLN B 78 VAL B 83 1 6 HELIX 25 25 VAL B 83 HIS B 89 1 7 HELIX 26 26 ARG B 91 VAL B 95 5 5 HELIX 27 27 GLN B 98 ASP B 103 1 6 HELIX 28 28 TYR B 105 LEU B 117 1 13 HELIX 29 29 PRO B 118 LEU B 120 5 3 HELIX 30 30 ASP B 130 LEU B 134 5 5 HELIX 31 31 PRO B 135 ARG B 143 1 9 HELIX 32 32 THR B 159 ASN B 164 1 6 HELIX 33 33 THR B 168 CYS B 177 1 10 HELIX 34 34 THR B 186 THR B 201 1 16 HELIX 35 35 GLU B 228 ALA B 237 1 10 HELIX 36 36 PRO B 241 ALA B 249 1 9 HELIX 37 37 LEU B 269 TYR B 283 1 15 HELIX 38 38 PRO B 284 HIS B 287 5 4 HELIX 39 39 VAL B 303 ALA B 317 1 15 HELIX 40 40 ASP B 340 SER B 351 1 12 HELIX 41 41 ASN B 364 GLN B 374 1 11 HELIX 42 42 ASP B 404 MET B 418 1 15 HELIX 43 43 SER B 419 ASN B 437 1 19 HELIX 44 44 ASP B 438 GLN B 452 1 15 HELIX 45 45 SER C 68 TYR C 76 1 9 HELIX 46 46 GLN C 78 VAL C 83 1 6 HELIX 47 47 VAL C 83 HIS C 89 1 7 HELIX 48 48 ARG C 91 VAL C 95 5 5 HELIX 49 49 GLN C 98 ASP C 103 1 6 HELIX 50 50 TYR C 105 LEU C 117 1 13 HELIX 51 51 PRO C 118 LEU C 120 5 3 HELIX 52 52 ASP C 130 LEU C 134 5 5 HELIX 53 53 PRO C 135 ARG C 143 1 9 HELIX 54 54 THR C 159 ASN C 164 1 6 HELIX 55 55 THR C 168 CYS C 177 1 10 HELIX 56 56 THR C 186 THR C 201 1 16 HELIX 57 57 GLU C 228 ALA C 237 1 10 HELIX 58 58 ALA C 245 LEU C 251 1 7 HELIX 59 59 LEU C 269 TYR C 283 1 15 HELIX 60 60 PRO C 284 HIS C 287 5 4 HELIX 61 61 VAL C 303 ALA C 317 1 15 HELIX 62 62 ASP C 340 SER C 351 1 12 HELIX 63 63 ASN C 364 GLN C 374 1 11 HELIX 64 64 ASP C 404 THR C 417 1 14 HELIX 65 65 SER C 419 ASN C 437 1 19 HELIX 66 66 ASP C 438 GLN C 452 1 15 HELIX 67 67 ASP D 14 ALA D 20 5 7 HELIX 68 68 SER D 68 TYR D 76 1 9 HELIX 69 69 GLN D 78 VAL D 83 1 6 HELIX 70 70 VAL D 83 HIS D 89 1 7 HELIX 71 71 ARG D 91 VAL D 95 5 5 HELIX 72 72 GLN D 98 ASP D 103 1 6 HELIX 73 73 TYR D 105 LEU D 117 1 13 HELIX 74 74 PRO D 118 LEU D 120 5 3 HELIX 75 75 ASP D 130 LEU D 134 5 5 HELIX 76 76 PRO D 135 LYS D 142 1 8 HELIX 77 77 THR D 159 ASN D 164 1 6 HELIX 78 78 THR D 168 CYS D 177 1 10 HELIX 79 79 THR D 186 THR D 201 1 16 HELIX 80 80 GLU D 228 ALA D 237 1 10 HELIX 81 81 PRO D 241 LYS D 243 5 3 HELIX 82 82 LEU D 244 LEU D 251 1 8 HELIX 83 83 LEU D 269 TYR D 283 1 15 HELIX 84 84 PRO D 284 HIS D 287 5 4 HELIX 85 85 VAL D 303 ALA D 317 1 15 HELIX 86 86 ASP D 340 SER D 351 1 12 HELIX 87 87 ASN D 364 GLN D 374 1 11 HELIX 88 88 ASP D 404 THR D 417 1 14 HELIX 89 89 SER D 419 ASN D 437 1 19 HELIX 90 90 ASP D 438 LYS D 451 1 14 SHEET 1 AA 3 TRP A 38 PHE A 39 0 SHEET 2 AA 3 LEU A 3 VAL A 6 1 O VAL A 5 N PHE A 39 SHEET 3 AA 3 ILE A 125 ILE A 128 1 O ILE A 125 N VAL A 4 SHEET 1 AB 2 LYS A 53 LYS A 56 0 SHEET 2 AB 2 THR A 61 SER A 64 -1 O TRP A 62 N VAL A 55 SHEET 1 AC 4 LEU A 181 LEU A 182 0 SHEET 2 AC 4 ALA A 217 THR A 220 1 O ARG A 219 N LEU A 182 SHEET 3 AC 4 SER A 210 THR A 212 -1 O HIS A 211 N PHE A 218 SHEET 4 AC 4 THR A 204 SER A 207 -1 O THR A 204 N THR A 212 SHEET 1 AD 3 GLN A 255 VAL A 260 0 SHEET 2 AD 3 ILE A 290 ILE A 295 1 O ARG A 291 N ILE A 257 SHEET 3 AD 3 LEU A 332 LEU A 335 1 O TYR A 333 N GLN A 294 SHEET 1 AE 2 VAL A 383 SER A 385 0 SHEET 2 AE 2 LEU A 398 VAL A 400 1 O LEU A 398 N LEU A 384 SHEET 1 BA 3 TRP B 38 PHE B 39 0 SHEET 2 BA 3 LEU B 3 SER B 7 1 O VAL B 5 N PHE B 39 SHEET 3 BA 3 ILE B 125 HIS B 129 1 O ILE B 125 N VAL B 4 SHEET 1 BB 2 LYS B 53 LYS B 56 0 SHEET 2 BB 2 THR B 61 SER B 64 -1 O TRP B 62 N VAL B 55 SHEET 1 BC 4 LEU B 181 LEU B 182 0 SHEET 2 BC 4 ALA B 217 THR B 220 1 O ARG B 219 N LEU B 182 SHEET 3 BC 4 SER B 210 ALA B 213 -1 O HIS B 211 N PHE B 218 SHEET 4 BC 4 VAL B 203 ARG B 206 -1 O THR B 204 N THR B 212 SHEET 1 BD 3 GLN B 255 VAL B 260 0 SHEET 2 BD 3 ILE B 290 ILE B 295 1 O ARG B 291 N ILE B 257 SHEET 3 BD 3 LEU B 332 LEU B 335 1 O TYR B 333 N GLN B 294 SHEET 1 BE 2 VAL B 383 SER B 385 0 SHEET 2 BE 2 LEU B 398 VAL B 400 1 O LEU B 398 N LEU B 384 SHEET 1 CA 3 TRP C 38 PHE C 39 0 SHEET 2 CA 3 LEU C 3 VAL C 6 1 O VAL C 5 N PHE C 39 SHEET 3 CA 3 ILE C 125 ILE C 128 1 O ILE C 125 N VAL C 4 SHEET 1 CB 2 LYS C 53 LYS C 56 0 SHEET 2 CB 2 THR C 61 SER C 64 -1 O TRP C 62 N VAL C 55 SHEET 1 CC 4 LEU C 181 LEU C 182 0 SHEET 2 CC 4 ALA C 217 THR C 220 1 O ARG C 219 N LEU C 182 SHEET 3 CC 4 SER C 210 THR C 212 -1 O HIS C 211 N PHE C 218 SHEET 4 CC 4 THR C 204 SER C 207 -1 O THR C 204 N THR C 212 SHEET 1 CD 3 GLN C 255 VAL C 260 0 SHEET 2 CD 3 ILE C 290 ILE C 295 1 O ARG C 291 N ILE C 257 SHEET 3 CD 3 LEU C 332 LEU C 335 1 O TYR C 333 N GLN C 294 SHEET 1 CE 2 VAL C 383 SER C 385 0 SHEET 2 CE 2 LEU C 398 VAL C 400 1 O LEU C 398 N LEU C 384 SHEET 1 DA 3 TRP D 38 PHE D 39 0 SHEET 2 DA 3 LEU D 3 VAL D 6 1 O VAL D 5 N PHE D 39 SHEET 3 DA 3 ILE D 125 ILE D 128 1 O ILE D 125 N VAL D 4 SHEET 1 DB 2 LYS D 53 LYS D 56 0 SHEET 2 DB 2 THR D 61 SER D 64 -1 O TRP D 62 N VAL D 55 SHEET 1 DC 4 LEU D 181 LEU D 182 0 SHEET 2 DC 4 ALA D 217 THR D 220 1 O ARG D 219 N LEU D 182 SHEET 3 DC 4 SER D 210 THR D 212 -1 O HIS D 211 N PHE D 218 SHEET 4 DC 4 THR D 204 ARG D 206 -1 O THR D 204 N THR D 212 SHEET 1 DD 3 GLN D 255 VAL D 260 0 SHEET 2 DD 3 ILE D 290 ILE D 295 1 O ARG D 291 N ILE D 257 SHEET 3 DD 3 LEU D 332 LEU D 335 1 O TYR D 333 N GLN D 294 SHEET 1 DE 2 VAL D 383 SER D 385 0 SHEET 2 DE 2 LEU D 398 VAL D 400 1 O LEU D 398 N LEU D 384 CISPEP 1 SER D 207 ALA D 208 0 -1.85 SITE 1 AC1 6 THR A 298 SER A 299 ARG A 300 GLY A 301 SITE 2 AC1 6 HOH A2196 HOH A2201 SITE 1 AC2 6 PHE A 97 HOH A2041 GLU B 271 PRO B 402 SITE 2 AC2 6 TYR B 403 ARG B 405 SITE 1 AC3 6 HIS A 89 ARG A 91 LEU A 359 TYR A 403 SITE 2 AC3 6 HOH A2036 HOH A2100 SITE 1 AC4 5 ASP A 180 ALA A 217 PHE A 218 ARG A 219 SITE 2 AC4 5 ILE A 453 SITE 1 AC5 5 ASN B 77 ARG B 300 GLY B 301 ASP B 302 SITE 2 AC5 5 HOH B2147 SITE 1 AC6 19 ALA A 20 GLY A 21 GLY A 22 VAL A 25 SITE 2 AC6 19 VAL A 260 ARG A 262 LYS A 267 HIS A 338 SITE 3 AC6 19 PHE A 339 ARG A 341 LEU A 344 ASN A 364 SITE 4 AC6 19 LEU A 365 VAL A 366 GLU A 369 VDO A1461 SITE 5 AC6 19 HOH A2197 HOH A2198 HOH A2199 SITE 1 AC7 26 ARG A 9 GLY A 22 LEU A 23 TYR A 76 SITE 2 AC7 26 TRP A 85 ASP A 130 HIS A 132 HIS A 154 SITE 3 AC7 26 ILE A 155 GLN A 185 ILE A 225 ARG A 262 SITE 4 AC7 26 ARG A 300 ASP A 361 GLY A 362 MET A 363 SITE 5 AC7 26 ASN A 364 LEU A 365 UDP A1460 HOH A2005 SITE 6 AC7 26 HOH A2013 HOH A2015 HOH A2033 HOH A2200 SITE 7 AC7 26 HOH A2201 HOH A2202 SITE 1 AC8 17 ALA B 20 GLY B 21 GLY B 22 VAL B 260 SITE 2 AC8 17 ARG B 262 LYS B 267 HIS B 338 PHE B 339 SITE 3 AC8 17 ARG B 341 LEU B 344 ASN B 364 LEU B 365 SITE 4 AC8 17 VAL B 366 GLU B 369 VDO B1462 HOH B2148 SITE 5 AC8 17 HOH B2149 SITE 1 AC9 26 ARG B 9 ALA B 20 GLY B 21 GLY B 22 SITE 2 AC9 26 LEU B 23 TYR B 76 TRP B 85 ASP B 130 SITE 3 AC9 26 TYR B 131 HIS B 132 HIS B 154 ILE B 155 SITE 4 AC9 26 ILE B 225 ARG B 262 ARG B 300 ASP B 361 SITE 5 AC9 26 GLY B 362 MET B 363 ASN B 364 LEU B 365 SITE 6 AC9 26 UDP B1461 HOH B2010 HOH B2030 HOH B2150 SITE 7 AC9 26 HOH B2151 HOH B2152 SITE 1 BC1 14 VAL C 260 ARG C 262 LYS C 267 HIS C 338 SITE 2 BC1 14 PHE C 339 ARG C 341 LEU C 344 ASN C 364 SITE 3 BC1 14 LEU C 365 VAL C 366 GLU C 369 VDO C1458 SITE 4 BC1 14 HOH C2073 HOH C2074 SITE 1 BC2 14 ASP C 130 HIS C 154 GLN C 185 ILE C 225 SITE 2 BC2 14 ARG C 262 ARG C 300 ASP C 361 GLY C 362 SITE 3 BC2 14 MET C 363 ASN C 364 LEU C 365 UDP C1457 SITE 4 BC2 14 HOH C2057 HOH C2075 SITE 1 BC3 18 VAL D 260 ARG D 262 LYS D 267 HIS D 338 SITE 2 BC3 18 PHE D 339 ARG D 341 LEU D 344 ASN D 364 SITE 3 BC3 18 LEU D 365 VAL D 366 GLU D 369 VDO D1459 SITE 4 BC3 18 HOH D2145 HOH D2147 HOH D2148 HOH D2149 SITE 5 BC3 18 HOH D2151 HOH D2152 SITE 1 BC4 17 TRP D 85 ASP D 130 HIS D 132 HIS D 154 SITE 2 BC4 17 ILE D 155 ILE D 225 ARG D 262 ARG D 300 SITE 3 BC4 17 ASP D 361 GLY D 362 MET D 363 ASN D 364 SITE 4 BC4 17 LEU D 365 UDP D1458 HOH D2153 HOH D2154 SITE 5 BC4 17 HOH D2155 CRYST1 104.515 120.287 173.786 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009568 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008313 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005754 0.00000