HEADER HYDROLASE 02-OCT-09 2WUG TITLE CRYSTAL STRUCTURE OF S114A MUTANT OF HSAD FROM MYCOBACTERIUM TITLE 2 TUBERCULOSIS IN COMPLEX WITH HOPDA COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOATE HYDROLASE BPHD; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HSAD, 2-HYDROXY-6-PHENYLHEXA-2\,4-DIENOIC ACID HYDROLASE; COMPND 5 EC: 3.7.1.8; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: H37RV; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 668369; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5[ALPHA]; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PT7-7 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.A.LACK,K.C.YAM,E.D.LOWE,G.P.HORSMAN,R.L.OWEN,E.SIM,L.D.ELTIS REVDAT 5 20-DEC-23 2WUG 1 REMARK REVDAT 4 02-FEB-10 2WUG 1 REMARK REVDAT 3 12-JAN-10 2WUG 1 JRNL REVDAT 2 10-NOV-09 2WUG 1 AUTHOR JRNL REVDAT 1 20-OCT-09 2WUG 0 JRNL AUTH N.A.LACK,K.C.YAM,E.D.LOWE,G.P.HORSMAN,R.L.OWEN,E.SIM, JRNL AUTH 2 L.D.ELTIS JRNL TITL CHARACTERIZATION OF A C-C HYDROLASE FROM MYCOBACTERIUM JRNL TITL 2 TUBERUCLOSIS INVOLVED IN CHOLESTEROL METABOLISM. JRNL REF J.BIOL.CHEM. V. 285 434 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 19875455 JRNL DOI 10.1074/JBC.M109.058081 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 54360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2730 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0431 - 4.7485 0.99 2956 161 0.1794 0.1899 REMARK 3 2 4.7485 - 3.7719 0.99 2863 150 0.1450 0.1535 REMARK 3 3 3.7719 - 3.2960 0.99 2814 157 0.1552 0.1811 REMARK 3 4 3.2960 - 2.9950 0.99 2833 147 0.1755 0.2116 REMARK 3 5 2.9950 - 2.7805 0.99 2810 159 0.1759 0.2051 REMARK 3 6 2.7805 - 2.6167 0.98 2776 136 0.1757 0.1963 REMARK 3 7 2.6167 - 2.4857 0.98 2796 151 0.1639 0.2203 REMARK 3 8 2.4857 - 2.3776 0.98 2772 154 0.1508 0.1919 REMARK 3 9 2.3776 - 2.2861 0.97 2777 119 0.1542 0.1580 REMARK 3 10 2.2861 - 2.2073 0.97 2756 137 0.1535 0.1926 REMARK 3 11 2.2073 - 2.1383 0.97 2732 138 0.1594 0.2001 REMARK 3 12 2.1383 - 2.0772 0.97 2764 150 0.1604 0.1782 REMARK 3 13 2.0772 - 2.0225 0.97 2762 128 0.1643 0.1819 REMARK 3 14 2.0225 - 1.9732 0.97 2721 156 0.1577 0.2028 REMARK 3 15 1.9732 - 1.9283 0.95 2644 169 0.1712 0.1966 REMARK 3 16 1.9283 - 1.8873 0.95 2694 142 0.1742 0.2265 REMARK 3 17 1.8873 - 1.8496 0.95 2681 132 0.1766 0.2026 REMARK 3 18 1.8496 - 1.8147 0.94 2651 146 0.1864 0.2462 REMARK 3 19 1.8147 - 1.7823 0.65 1828 98 0.1977 0.2242 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 50.68 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 NULL REMARK 3 ANGLE : 0.774 NULL REMARK 3 CHIRALITY : 0.063 NULL REMARK 3 PLANARITY : 0.005 NULL REMARK 3 DIHEDRAL : 10.420 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7086 -16.5145 29.2109 REMARK 3 T TENSOR REMARK 3 T11: 0.0444 T22: 0.0620 REMARK 3 T33: 0.0348 T12: -0.0356 REMARK 3 T13: 0.0003 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.4296 L22: 0.3160 REMARK 3 L33: 0.1928 L12: -0.0502 REMARK 3 L13: -0.0814 L23: -0.0943 REMARK 3 S TENSOR REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3215 -44.7371 15.9484 REMARK 3 T TENSOR REMARK 3 T11: 0.0838 T22: 0.0581 REMARK 3 T33: 0.0907 T12: -0.0488 REMARK 3 T13: -0.0319 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 0.3093 L22: 0.3426 REMARK 3 L33: 0.4987 L12: -0.3139 REMARK 3 L13: -0.1615 L23: 0.0391 REMARK 3 S TENSOR REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2249 REMARK 3 RMSD : 0.527 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2WUG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1290041307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00010 REMARK 200 MONOCHROMATOR : FIXED-EXIT LN2 COOLED DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : RH COATED MERIDIONALLY FOCUSSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55165 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.41000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2WUD REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM KSCN, 24% PEG 3350, 100MM BIS REMARK 280 -TRIS PROPANE PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.98550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 90.44650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.98550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 90.44650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.98550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 90.44650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.98550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.44650 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 90.44650 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 90.44650 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 90.44650 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 90.44650 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.98550 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 58.98550 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 58.98550 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 55.94150 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 58.98550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, SER 114 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, SER 114 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 290 REMARK 465 ARG A 291 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 THR B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 GLY B 290 REMARK 465 ARG B 291 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2119 O HOH B 2121 0.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 133 NE - CZ - NH1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 133 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG B 228 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 114 -120.60 51.21 REMARK 500 ALA B 114 -118.97 50.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO B 23 -10.22 REMARK 500 PRO B 23 -10.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HPK A 1290 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SCN A 1291 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HPK B 1290 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1291 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WUD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF S114A MUTANT OF HSAD FROM MYCOBACTERIUM REMARK 900 TUBERCULOSIS REMARK 900 RELATED ID: 2VF2 RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF HSAD FROM MYCOBACTERIUM TUBERCULOSIS REMARK 900 RELATED ID: 2WUE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF S114A MUTANT OF HSAD FROM MYCOBACTERIUM REMARK 900 TUBERCULOSIS IN COMPLEX WITH HOPODA REMARK 900 RELATED ID: 2WUF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF S114A MUTANT OF HSAD FROM MYCOBACTERIUM REMARK 900 TUBERCULOSIS IN COMPLEX WITH 4,9DSHA REMARK 999 REMARK 999 SEQUENCE REMARK 999 S114A MUTANT DBREF 2WUG A 1 291 UNP P96851 P96851_MYCTU 1 291 DBREF 2WUG B 1 291 UNP P96851 P96851_MYCTU 1 291 SEQADV 2WUG ALA A 114 UNP P96851 SER 114 ENGINEERED MUTATION SEQADV 2WUG ALA B 114 UNP P96851 SER 114 ENGINEERED MUTATION SEQRES 1 A 291 MET THR ALA THR GLU GLU LEU THR PHE GLU SER THR SER SEQRES 2 A 291 ARG PHE ALA GLU VAL ASP VAL ASP GLY PRO LEU LYS LEU SEQRES 3 A 291 HIS TYR HIS GLU ALA GLY VAL GLY ASN ASP GLN THR VAL SEQRES 4 A 291 VAL LEU LEU HIS GLY GLY GLY PRO GLY ALA ALA SER TRP SEQRES 5 A 291 THR ASN PHE SER ARG ASN ILE ALA VAL LEU ALA ARG HIS SEQRES 6 A 291 PHE HIS VAL LEU ALA VAL ASP GLN PRO GLY TYR GLY HIS SEQRES 7 A 291 SER ASP LYS ARG ALA GLU HIS GLY GLN PHE ASN ARG TYR SEQRES 8 A 291 ALA ALA MET ALA LEU LYS GLY LEU PHE ASP GLN LEU GLY SEQRES 9 A 291 LEU GLY ARG VAL PRO LEU VAL GLY ASN ALA LEU GLY GLY SEQRES 10 A 291 GLY THR ALA VAL ARG PHE ALA LEU ASP TYR PRO ALA ARG SEQRES 11 A 291 ALA GLY ARG LEU VAL LEU MET GLY PRO GLY GLY LEU SER SEQRES 12 A 291 ILE ASN LEU PHE ALA PRO ASP PRO THR GLU GLY VAL LYS SEQRES 13 A 291 ARG LEU SER LYS PHE SER VAL ALA PRO THR ARG GLU ASN SEQRES 14 A 291 LEU GLU ALA PHE LEU ARG VAL MET VAL TYR ASP LYS ASN SEQRES 15 A 291 LEU ILE THR PRO GLU LEU VAL ASP GLN ARG PHE ALA LEU SEQRES 16 A 291 ALA SER THR PRO GLU SER LEU THR ALA THR ARG ALA MET SEQRES 17 A 291 GLY LYS SER PHE ALA GLY ALA ASP PHE GLU ALA GLY MET SEQRES 18 A 291 MET TRP ARG GLU VAL TYR ARG LEU ARG GLN PRO VAL LEU SEQRES 19 A 291 LEU ILE TRP GLY ARG GLU ASP ARG VAL ASN PRO LEU ASP SEQRES 20 A 291 GLY ALA LEU VAL ALA LEU LYS THR ILE PRO ARG ALA GLN SEQRES 21 A 291 LEU HIS VAL PHE GLY GLN CYS GLY HIS TRP VAL GLN VAL SEQRES 22 A 291 GLU LYS PHE ASP GLU PHE ASN LYS LEU THR ILE GLU PHE SEQRES 23 A 291 LEU GLY GLY GLY ARG SEQRES 1 B 291 MET THR ALA THR GLU GLU LEU THR PHE GLU SER THR SER SEQRES 2 B 291 ARG PHE ALA GLU VAL ASP VAL ASP GLY PRO LEU LYS LEU SEQRES 3 B 291 HIS TYR HIS GLU ALA GLY VAL GLY ASN ASP GLN THR VAL SEQRES 4 B 291 VAL LEU LEU HIS GLY GLY GLY PRO GLY ALA ALA SER TRP SEQRES 5 B 291 THR ASN PHE SER ARG ASN ILE ALA VAL LEU ALA ARG HIS SEQRES 6 B 291 PHE HIS VAL LEU ALA VAL ASP GLN PRO GLY TYR GLY HIS SEQRES 7 B 291 SER ASP LYS ARG ALA GLU HIS GLY GLN PHE ASN ARG TYR SEQRES 8 B 291 ALA ALA MET ALA LEU LYS GLY LEU PHE ASP GLN LEU GLY SEQRES 9 B 291 LEU GLY ARG VAL PRO LEU VAL GLY ASN ALA LEU GLY GLY SEQRES 10 B 291 GLY THR ALA VAL ARG PHE ALA LEU ASP TYR PRO ALA ARG SEQRES 11 B 291 ALA GLY ARG LEU VAL LEU MET GLY PRO GLY GLY LEU SER SEQRES 12 B 291 ILE ASN LEU PHE ALA PRO ASP PRO THR GLU GLY VAL LYS SEQRES 13 B 291 ARG LEU SER LYS PHE SER VAL ALA PRO THR ARG GLU ASN SEQRES 14 B 291 LEU GLU ALA PHE LEU ARG VAL MET VAL TYR ASP LYS ASN SEQRES 15 B 291 LEU ILE THR PRO GLU LEU VAL ASP GLN ARG PHE ALA LEU SEQRES 16 B 291 ALA SER THR PRO GLU SER LEU THR ALA THR ARG ALA MET SEQRES 17 B 291 GLY LYS SER PHE ALA GLY ALA ASP PHE GLU ALA GLY MET SEQRES 18 B 291 MET TRP ARG GLU VAL TYR ARG LEU ARG GLN PRO VAL LEU SEQRES 19 B 291 LEU ILE TRP GLY ARG GLU ASP ARG VAL ASN PRO LEU ASP SEQRES 20 B 291 GLY ALA LEU VAL ALA LEU LYS THR ILE PRO ARG ALA GLN SEQRES 21 B 291 LEU HIS VAL PHE GLY GLN CYS GLY HIS TRP VAL GLN VAL SEQRES 22 B 291 GLU LYS PHE ASP GLU PHE ASN LYS LEU THR ILE GLU PHE SEQRES 23 B 291 LEU GLY GLY GLY ARG HET HPK A1290 16 HET SCN A1291 3 HET HPK B1290 16 HET GOL B1291 6 HETNAM HPK (3E)-2,6-DIOXO-6-PHENYLHEX-3-ENOATE HETNAM SCN THIOCYANATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 HPK 2(C12 H9 O4 1-) FORMUL 4 SCN C N S 1- FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *275(H2 O) HELIX 1 1 THR A 8 THR A 12 1 5 HELIX 2 2 ALA A 50 ALA A 63 1 14 HELIX 3 3 GLN A 87 LYS A 97 1 11 HELIX 4 4 THR A 119 TYR A 127 1 9 HELIX 5 5 PRO A 128 ALA A 131 5 4 HELIX 6 6 VAL A 155 ALA A 164 1 10 HELIX 7 7 THR A 166 VAL A 176 1 11 HELIX 8 8 ASP A 180 ILE A 184 5 5 HELIX 9 9 THR A 185 SER A 197 1 13 HELIX 10 10 THR A 198 MET A 208 1 11 HELIX 11 11 MET A 221 GLU A 225 5 5 HELIX 12 12 GLU A 225 LEU A 229 5 5 HELIX 13 13 ALA A 249 ILE A 256 1 8 HELIX 14 14 TRP A 270 LYS A 275 1 6 HELIX 15 15 LYS A 275 LEU A 287 1 13 HELIX 16 16 THR B 8 THR B 12 1 5 HELIX 17 17 ALA B 50 ALA B 63 1 14 HELIX 18 18 GLN B 87 LYS B 97 1 11 HELIX 19 19 THR B 119 TYR B 127 1 9 HELIX 20 20 PRO B 128 ALA B 131 5 4 HELIX 21 21 VAL B 155 ALA B 164 1 10 HELIX 22 22 THR B 166 VAL B 176 1 11 HELIX 23 23 ASP B 180 ILE B 184 5 5 HELIX 24 24 THR B 185 SER B 197 1 13 HELIX 25 25 THR B 198 MET B 208 1 11 HELIX 26 26 MET B 221 GLU B 225 5 5 HELIX 27 27 GLU B 225 LEU B 229 5 5 HELIX 28 28 ALA B 249 ILE B 256 1 8 HELIX 29 29 TRP B 270 LYS B 275 1 6 HELIX 30 30 LYS B 275 LEU B 287 1 13 SHEET 1 AA 5 SER A 13 VAL A 18 0 SHEET 2 AA 5 LEU A 24 ALA A 31 -1 O LEU A 24 N VAL A 18 SHEET 3 AA 5 HIS A 67 VAL A 71 -1 O VAL A 68 N ALA A 31 SHEET 4 AA 5 THR A 38 LEU A 42 1 O VAL A 39 N LEU A 69 SHEET 5 AA 5 LEU A 110 VAL A 111 1 O VAL A 111 N LEU A 42 SHEET 1 AB 3 LEU A 134 LEU A 136 0 SHEET 2 AB 3 VAL A 233 TRP A 237 1 O LEU A 234 N LEU A 136 SHEET 3 AB 3 ALA A 259 VAL A 263 1 O GLN A 260 N LEU A 235 SHEET 1 BA 5 SER B 13 VAL B 18 0 SHEET 2 BA 5 LEU B 24 ALA B 31 -1 O LEU B 24 N VAL B 18 SHEET 3 BA 5 HIS B 67 VAL B 71 -1 O VAL B 68 N ALA B 31 SHEET 4 BA 5 THR B 38 LEU B 42 1 O VAL B 39 N LEU B 69 SHEET 5 BA 5 LEU B 110 VAL B 111 1 O VAL B 111 N LEU B 42 SHEET 1 BB 3 LEU B 134 LEU B 136 0 SHEET 2 BB 3 VAL B 233 TRP B 237 1 O LEU B 234 N LEU B 136 SHEET 3 BB 3 ALA B 259 VAL B 263 1 O GLN B 260 N LEU B 235 CISPEP 1 ASP A 150 PRO A 151 0 -0.69 CISPEP 2 ASP B 150 PRO B 151 0 -2.01 SITE 1 AC1 12 GLY A 44 GLY A 45 GLY A 46 ALA A 49 SITE 2 AC1 12 ASN A 54 ASN A 113 ALA A 114 LEU A 115 SITE 3 AC1 12 ARG A 192 MET A 208 HIS A 269 TRP A 270 SITE 1 AC2 6 LYS A 97 TYR A 127 ALA A 129 ARG A 130 SITE 2 AC2 6 GLY B 106 ARG B 130 SITE 1 AC3 11 GLY B 45 GLY B 46 ALA B 49 ASN B 54 SITE 2 AC3 11 ASN B 113 ALA B 114 LEU B 115 VAL B 155 SITE 3 AC3 11 ARG B 192 HIS B 269 TRP B 270 SITE 1 AC4 1 TYR B 179 CRYST1 111.883 117.971 180.893 90.00 90.00 90.00 F 2 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008938 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005528 0.00000 MTRIX1 1 0.025482 0.999643 -0.007984 30.86480 1 MTRIX2 1 0.999668 -0.025512 -0.003644 -30.86400 1 MTRIX3 1 -0.003847 -0.007889 -0.999961 44.83840 1