HEADER TRANSCRIPTION 12-OCT-09 2WV1 TITLE CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169-186 TITLE 2 SUBSTITUTED BY A LINKER CONTAINING TWO THROMBIN SITES COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOLYSIN II REGULATORY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 4-168,187-201; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: SEGMENT 169-186 SUBSTITUTED BY A LINKER CONTAINING TWO COMPND 7 THROMBIN SITES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS; SOURCE 3 ORGANISM_TAXID: 1396; SOURCE 4 STRAIN: B771; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: B834; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS TRANSCRIPTION, TRANSCRIPTION REGULATION, TETR FAMILY EXPDTA X-RAY DIFFRACTION AUTHOR O.V.KOVALEVSKIY,A.S.SOLONIN,A.A.ANTSON REVDAT 4 20-DEC-23 2WV1 1 REMARK REVDAT 3 13-JUL-11 2WV1 1 VERSN REVDAT 2 23-MAR-10 2WV1 1 JRNL REMARK REVDAT 1 20-OCT-09 2WV1 0 JRNL AUTH O.V.KOVALEVSKIY,A.S.SOLONIN,A.A.ANTSON JRNL TITL STRUCTURAL INVESTIGATION OF TRANSCRIPTIONAL REGULATOR JRNL TITL 2 HLYIIR: INFLUENCE OF A DISORDERED REGION ON PROTEIN FOLD AND JRNL TITL 3 DIMERIZATION. JRNL REF PROTEINS V. 78 1870 2010 JRNL REFN ISSN 0887-3585 JRNL PMID 20225260 JRNL DOI 10.1002/PROT.22700 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0097 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 22337 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1194 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3185 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 175 REMARK 3 BIN FREE R VALUE : 0.3250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2997 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 155 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 52.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.99000 REMARK 3 B22 (A**2) : -1.53000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.252 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.160 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.895 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3100 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4170 ; 1.248 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 369 ; 4.977 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 150 ;39.362 ;24.733 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 581 ;16.327 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;21.645 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 448 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2316 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1830 ; 1.728 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2955 ; 3.137 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1270 ; 5.251 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1211 ; 7.802 ;12.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 66 REMARK 3 ORIGIN FOR THE GROUP (A): -17.3090 20.7690 -13.2260 REMARK 3 T TENSOR REMARK 3 T11: 0.3100 T22: 0.0164 REMARK 3 T33: 0.1122 T12: 0.0183 REMARK 3 T13: 0.0462 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 3.2512 L22: 14.3934 REMARK 3 L33: 3.1246 L12: 1.7886 REMARK 3 L13: 0.6758 L23: -2.4774 REMARK 3 S TENSOR REMARK 3 S11: 0.1343 S12: -0.1668 S13: 0.3171 REMARK 3 S21: -0.5361 S22: -0.0162 S23: 0.3089 REMARK 3 S31: -0.1119 S32: 0.0130 S33: -0.1181 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 68 A 198 REMARK 3 ORIGIN FOR THE GROUP (A): -18.4050 -3.1940 -0.0740 REMARK 3 T TENSOR REMARK 3 T11: 0.2206 T22: 0.0863 REMARK 3 T33: 0.0903 T12: 0.0017 REMARK 3 T13: -0.0087 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.7249 L22: 2.5316 REMARK 3 L33: 1.9524 L12: 0.2111 REMARK 3 L13: -0.7658 L23: -0.2414 REMARK 3 S TENSOR REMARK 3 S11: 0.0566 S12: -0.0084 S13: 0.2965 REMARK 3 S21: -0.0179 S22: 0.0478 S23: -0.1958 REMARK 3 S31: -0.2356 S32: -0.0215 S33: -0.1044 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 66 REMARK 3 ORIGIN FOR THE GROUP (A): -9.0390 -1.3380 -36.2920 REMARK 3 T TENSOR REMARK 3 T11: 0.4569 T22: 0.1607 REMARK 3 T33: 0.0573 T12: -0.0093 REMARK 3 T13: 0.0561 T23: 0.0834 REMARK 3 L TENSOR REMARK 3 L11: 5.3652 L22: 5.2793 REMARK 3 L33: 13.5115 L12: 2.9005 REMARK 3 L13: -4.1059 L23: -3.2406 REMARK 3 S TENSOR REMARK 3 S11: 0.1724 S12: 0.0857 S13: 0.0826 REMARK 3 S21: -0.0845 S22: -0.0259 S23: -0.0563 REMARK 3 S31: -0.0597 S32: 0.1759 S33: -0.1465 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 67 B 198 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6920 -16.5280 -14.2490 REMARK 3 T TENSOR REMARK 3 T11: 0.2138 T22: 0.0788 REMARK 3 T33: 0.0175 T12: -0.0158 REMARK 3 T13: 0.0215 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 2.8654 L22: 2.2263 REMARK 3 L33: 2.1748 L12: -0.1380 REMARK 3 L13: -0.0737 L23: -0.6088 REMARK 3 S TENSOR REMARK 3 S11: -0.0046 S12: 0.3063 S13: 0.0193 REMARK 3 S21: -0.2970 S22: -0.0790 S23: -0.0709 REMARK 3 S31: 0.0128 S32: 0.0727 S33: 0.0836 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. U REMARK 3 VALUES RESIDUAL ONLY. LINKER REGION WAS CUT OFF USING THROMBIN REMARK 4 REMARK 4 2WV1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1290041389. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9755 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23639 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.59000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2FX0 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, SODIUM NITRATE, PEG3350, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.15750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.61900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.23650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 69.61900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.15750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.23650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 HIS A 1 REMARK 465 MET A 2 REMARK 465 ALA A 3 REMARK 465 GLU A 67 REMARK 465 ARG A 173 REMARK 465 GLY A 174 REMARK 465 SER A 175 REMARK 465 GLY A 176 REMARK 465 GLY A 177 REMARK 465 LEU A 178 REMARK 465 VAL A 179 REMARK 465 PRO A 180 REMARK 465 ARG A 181 REMARK 465 GLY A 182 REMARK 465 PRO A 199 REMARK 465 ASN A 200 REMARK 465 ILE A 201 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 HIS B 1 REMARK 465 MET B 2 REMARK 465 ALA B 3 REMARK 465 ARG B 173 REMARK 465 GLY B 174 REMARK 465 SER B 175 REMARK 465 GLY B 176 REMARK 465 GLY B 177 REMARK 465 LEU B 178 REMARK 465 VAL B 179 REMARK 465 PRO B 180 REMARK 465 ARG B 181 REMARK 465 GLY B 182 REMARK 465 SER B 183 REMARK 465 PRO B 199 REMARK 465 ASN B 200 REMARK 465 ILE B 201 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 106 -29.44 -37.62 REMARK 500 GLU A 111 53.13 37.72 REMARK 500 PRO A 120 -11.53 -45.49 REMARK 500 PHE A 122 -37.38 -144.34 REMARK 500 PHE B 77 18.83 59.21 REMARK 500 GLU B 106 -74.46 -62.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 1199 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JJ7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 170- REMARK 900 185 SUBSTITUTED BY ALANINE REMARK 900 RELATED ID: 2FX0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HLYIIR, A HEMOLYSIN II TRANSCRIPTIONALREGULATOR REMARK 900 RELATED ID: 2JK3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HLYIIR MUTANT PROTEIN WITH RESIDUES 169- REMARK 900 186 SUBSTITUTED BY GSSGSSG LINKER REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEGMENT 169-186 SUBSTITUTED BY A LINKER REMARK 999 CONTAINING TWO THROMBIN SITES DBREF 2WV1 A 4 168 UNP Q7X506 Q7X506_BACCE 4 168 DBREF 2WV1 A 187 201 UNP Q7X506 Q7X506_BACCE 187 201 DBREF 2WV1 B 4 168 UNP Q7X506 Q7X506_BACCE 4 168 DBREF 2WV1 B 187 201 UNP Q7X506 Q7X506_BACCE 187 201 SEQADV 2WV1 GLY A -1 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 SER A 0 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 HIS A 1 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 MET A 2 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 ALA A 3 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 GLY A 169 UNP Q7X506 LINKER SEQADV 2WV1 VAL A 171 UNP Q7X506 LINKER SEQADV 2WV1 PRO A 172 UNP Q7X506 LINKER SEQADV 2WV1 ARG A 173 UNP Q7X506 LINKER SEQADV 2WV1 GLY A 174 UNP Q7X506 LINKER SEQADV 2WV1 SER A 175 UNP Q7X506 LINKER SEQADV 2WV1 GLY A 176 UNP Q7X506 LINKER SEQADV 2WV1 GLY A 177 UNP Q7X506 LINKER SEQADV 2WV1 LEU A 178 UNP Q7X506 LINKER SEQADV 2WV1 VAL A 179 UNP Q7X506 LINKER SEQADV 2WV1 PRO A 180 UNP Q7X506 LINKER SEQADV 2WV1 ARG A 181 UNP Q7X506 LINKER SEQADV 2WV1 GLY A 182 UNP Q7X506 LINKER SEQADV 2WV1 SER A 184 UNP Q7X506 LINKER SEQADV 2WV1 GLY A 185 UNP Q7X506 LINKER SEQADV 2WV1 ASP A 186 UNP Q7X506 LINKER SEQADV 2WV1 GLY B -1 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 SER B 0 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 HIS B 1 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 MET B 2 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 ALA B 3 UNP Q7X506 EXPRESSION TAG SEQADV 2WV1 GLY B 169 UNP Q7X506 LINKER SEQADV 2WV1 VAL B 171 UNP Q7X506 LINKER SEQADV 2WV1 PRO B 172 UNP Q7X506 LINKER SEQADV 2WV1 ARG B 173 UNP Q7X506 LINKER SEQADV 2WV1 GLY B 174 UNP Q7X506 LINKER SEQADV 2WV1 SER B 175 UNP Q7X506 LINKER SEQADV 2WV1 GLY B 176 UNP Q7X506 LINKER SEQADV 2WV1 GLY B 177 UNP Q7X506 LINKER SEQADV 2WV1 LEU B 178 UNP Q7X506 LINKER SEQADV 2WV1 VAL B 179 UNP Q7X506 LINKER SEQADV 2WV1 PRO B 180 UNP Q7X506 LINKER SEQADV 2WV1 ARG B 181 UNP Q7X506 LINKER SEQADV 2WV1 GLY B 182 UNP Q7X506 LINKER SEQADV 2WV1 SER B 183 UNP Q7X506 LINKER SEQADV 2WV1 GLY B 185 UNP Q7X506 LINKER SEQADV 2WV1 ASP B 186 UNP Q7X506 LINKER SEQRES 1 A 202 GLY SER HIS MET ALA SER ARG GLU GLN THR MET GLU ASN SEQRES 2 A 202 ILE LEU LYS ALA ALA LYS LYS LYS PHE GLY GLU ARG GLY SEQRES 3 A 202 TYR GLU GLY THR SER ILE GLN GLU ILE ALA LYS GLU ALA SEQRES 4 A 202 LYS VAL ASN VAL ALA MET ALA SER TYR TYR PHE ASN GLY SEQRES 5 A 202 LYS GLU ASN LEU TYR TYR GLU VAL PHE LYS LYS TYR GLY SEQRES 6 A 202 LEU ALA ASN GLU LEU PRO ASN PHE LEU GLU LYS ASN GLN SEQRES 7 A 202 PHE ASN PRO ILE ASN ALA LEU ARG GLU TYR LEU THR VAL SEQRES 8 A 202 PHE THR THR HIS ILE LYS GLU ASN PRO GLU ILE GLY THR SEQRES 9 A 202 LEU ALA TYR GLU GLU ILE ILE LYS GLU SER ALA ARG LEU SEQRES 10 A 202 GLU LYS ILE LYS PRO TYR PHE ILE GLY SER PHE GLU GLN SEQRES 11 A 202 LEU LYS GLU ILE LEU GLN GLU GLY GLU LYS GLN GLY VAL SEQRES 12 A 202 PHE HIS PHE PHE SER ILE ASN HIS THR ILE HIS TRP ILE SEQRES 13 A 202 THR SER ILE VAL LEU PHE PRO LYS PHE LYS LYS PHE ILE SEQRES 14 A 202 ASP GLY LEU VAL PRO ARG GLY SER GLY GLY LEU VAL PRO SEQRES 15 A 202 ARG GLY SER GLY ASP LEU VAL SER ARG ILE ILE SER ALA SEQRES 16 A 202 LEU THR ASP LYS PRO ASN ILE SEQRES 1 B 202 GLY SER HIS MET ALA SER ARG GLU GLN THR MET GLU ASN SEQRES 2 B 202 ILE LEU LYS ALA ALA LYS LYS LYS PHE GLY GLU ARG GLY SEQRES 3 B 202 TYR GLU GLY THR SER ILE GLN GLU ILE ALA LYS GLU ALA SEQRES 4 B 202 LYS VAL ASN VAL ALA MET ALA SER TYR TYR PHE ASN GLY SEQRES 5 B 202 LYS GLU ASN LEU TYR TYR GLU VAL PHE LYS LYS TYR GLY SEQRES 6 B 202 LEU ALA ASN GLU LEU PRO ASN PHE LEU GLU LYS ASN GLN SEQRES 7 B 202 PHE ASN PRO ILE ASN ALA LEU ARG GLU TYR LEU THR VAL SEQRES 8 B 202 PHE THR THR HIS ILE LYS GLU ASN PRO GLU ILE GLY THR SEQRES 9 B 202 LEU ALA TYR GLU GLU ILE ILE LYS GLU SER ALA ARG LEU SEQRES 10 B 202 GLU LYS ILE LYS PRO TYR PHE ILE GLY SER PHE GLU GLN SEQRES 11 B 202 LEU LYS GLU ILE LEU GLN GLU GLY GLU LYS GLN GLY VAL SEQRES 12 B 202 PHE HIS PHE PHE SER ILE ASN HIS THR ILE HIS TRP ILE SEQRES 13 B 202 THR SER ILE VAL LEU PHE PRO LYS PHE LYS LYS PHE ILE SEQRES 14 B 202 ASP GLY LEU VAL PRO ARG GLY SER GLY GLY LEU VAL PRO SEQRES 15 B 202 ARG GLY SER GLY ASP LEU VAL SER ARG ILE ILE SER ALA SEQRES 16 B 202 LEU THR ASP LYS PRO ASN ILE HET NO3 B1199 4 HETNAM NO3 NITRATE ION FORMUL 3 NO3 N O3 1- FORMUL 4 HOH *155(H2 O) HELIX 1 1 SER A 4 PHE A 20 1 17 HELIX 2 2 SER A 29 ALA A 37 1 9 HELIX 3 3 ASN A 40 PHE A 48 1 9 HELIX 4 4 LYS A 51 TYR A 62 1 12 HELIX 5 5 ASN A 70 ASN A 75 1 6 HELIX 6 6 ASN A 78 ASN A 97 1 20 HELIX 7 7 THR A 102 GLU A 111 1 10 HELIX 8 8 SER A 112 LYS A 119 1 8 HELIX 9 9 PRO A 120 PHE A 122 5 3 HELIX 10 10 SER A 125 GLU A 135 1 11 HELIX 11 11 SER A 146 PHE A 160 1 15 HELIX 12 12 PHE A 160 ASP A 168 1 9 HELIX 13 13 ASP A 186 ASP A 197 1 12 HELIX 14 14 SER B 4 PHE B 20 1 17 HELIX 15 15 SER B 29 ALA B 37 1 9 HELIX 16 16 ASN B 40 ASN B 49 1 10 HELIX 17 17 LYS B 51 TYR B 62 1 12 HELIX 18 18 ASN B 70 ASN B 75 1 6 HELIX 19 19 ASN B 78 ASN B 97 1 20 HELIX 20 20 THR B 102 GLU B 111 1 10 HELIX 21 21 SER B 112 LYS B 119 1 8 HELIX 22 22 PRO B 120 PHE B 122 5 3 HELIX 23 23 SER B 125 GLU B 135 1 11 HELIX 24 24 SER B 146 PHE B 160 1 15 HELIX 25 25 PHE B 160 ASP B 168 1 9 HELIX 26 26 ASP B 186 ASP B 197 1 12 SITE 1 AC1 7 ARG A 84 SER A 189 ILE A 192 ARG B 84 SITE 2 AC1 7 SER B 189 ILE B 192 HOH B2078 CRYST1 52.315 70.473 139.238 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019115 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014190 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007182 0.00000