HEADER PRION-BINDING PROTEIN 19-OCT-09 2WVO TITLE STRUCTURE OF THE HET-S N-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SMALL S PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 1-227; COMPND 5 SYNONYM: HET-S; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PODOSPORA ANSERINA; SOURCE 3 ORGANISM_TAXID: 5145; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET24 KEYWDS PRION-BINDING PROTEIN, PRION REGULATORY DOMAIN, HETEROKARYON KEYWDS 2 INCOMPATIBILITY EXPDTA X-RAY DIFFRACTION AUTHOR J.GREENWALD,C.BUHTZ,C.RITTER,W.KWIATKOWSKI,S.CHOE,S.J.SAUPE,R.RIEK REVDAT 4 20-DEC-23 2WVO 1 REMARK REVDAT 3 08-MAY-19 2WVO 1 REMARK REVDAT 2 13-JUL-11 2WVO 1 VERSN REVDAT 1 28-JUL-10 2WVO 0 JRNL AUTH J.GREENWALD,C.BUHTZ,C.RITTER,W.KWIATKOWSKI,S.CHOE, JRNL AUTH 2 M.L.MADDELEIN,F.NESS,S.CESCAU,A.SORAGNI,D.LEITZ,S.J.SAUPE, JRNL AUTH 3 R.RIEK JRNL TITL THE MECHANISM OF PRION INHIBITION BY HET-S. JRNL REF MOL.CELL V. 38 889 2010 JRNL REFN ISSN 1097-2765 JRNL PMID 20620958 JRNL DOI 10.1016/J.MOLCEL.2010.05.019 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 38256 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2027 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2767 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE SET COUNT : 135 REMARK 3 BIN FREE R VALUE : 0.3790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3480 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 135 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : UNVERIFIED REMARK 3 FROM WILSON PLOT (A**2) : 61.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : -0.39000 REMARK 3 B33 (A**2) : 0.59000 REMARK 3 B12 (A**2) : -0.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.209 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.187 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.148 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.389 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3593 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4852 ; 1.411 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 458 ; 5.282 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 177 ;38.933 ;24.463 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 670 ;20.590 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;20.722 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 546 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2707 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1596 ; 0.188 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2497 ; 0.285 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 149 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.266 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.175 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2302 ; 0.586 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3576 ; 1.066 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1433 ; 1.455 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1268 ; 2.320 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): 33.997 -13.0460 16.521 REMARK 3 T TENSOR REMARK 3 T11: 0.0194 T22: -0.0415 REMARK 3 T33: -0.1099 T12: -0.0874 REMARK 3 T13: 0.0433 T23: -0.0204 REMARK 3 L TENSOR REMARK 3 L11: 1.5265 L22: 5.6822 REMARK 3 L33: 0.6696 L12: 1.4189 REMARK 3 L13: 0.3785 L23: -0.8230 REMARK 3 S TENSOR REMARK 3 S11: -0.2668 S12: 0.0855 S13: 0.0426 REMARK 3 S21: -0.1866 S22: 0.2923 S23: -0.0034 REMARK 3 S31: 0.0757 S32: -0.1699 S33: -0.0254 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 138 REMARK 3 ORIGIN FOR THE GROUP (A): 26.175 -0.542 -21.778 REMARK 3 T TENSOR REMARK 3 T11: -0.1155 T22: -0.0616 REMARK 3 T33: -0.1146 T12: -0.0956 REMARK 3 T13: -0.1365 T23: 0.1413 REMARK 3 L TENSOR REMARK 3 L11: 4.7211 L22: 10.7108 REMARK 3 L33: 1.9290 L12: 0.6428 REMARK 3 L13: 1.0199 L23: -0.6630 REMARK 3 S TENSOR REMARK 3 S11: -0.3426 S12: 0.1439 S13: 0.6725 REMARK 3 S21: -0.3406 S22: 0.2704 S23: 1.3738 REMARK 3 S31: -0.2243 S32: -0.4589 S33: 0.0722 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 152 A 174 REMARK 3 ORIGIN FOR THE GROUP (A): 40.045 -14.1710 22.512 REMARK 3 T TENSOR REMARK 3 T11: 0.1157 T22: -0.0490 REMARK 3 T33: -0.1070 T12: -0.1638 REMARK 3 T13: 0.1640 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.6698 L22: 22.7492 REMARK 3 L33: 1.7088 L12: 2.0722 REMARK 3 L13: -0.9827 L23: 0.9629 REMARK 3 S TENSOR REMARK 3 S11: -0.5162 S12: 0.3093 S13: -0.3396 REMARK 3 S21: -2.0477 S22: 0.2468 S23: -1.6002 REMARK 3 S31: -0.1002 S32: 0.0909 S33: 0.2693 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 176 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): 27.133 -14.3930 35.703 REMARK 3 T TENSOR REMARK 3 T11: 0.6529 T22: -0.0058 REMARK 3 T33: -0.2324 T12: -0.4560 REMARK 3 T13: -0.1950 T23: 0.0604 REMARK 3 L TENSOR REMARK 3 L11: 0.7303 L22: 12.3011 REMARK 3 L33: 6.3685 L12: -0.4353 REMARK 3 L13: 1.3983 L23: -4.5291 REMARK 3 S TENSOR REMARK 3 S11: -0.4751 S12: 0.5933 S13: 0.0886 REMARK 3 S21: -2.8902 S22: 0.5188 S23: 0.7345 REMARK 3 S31: 0.9818 S32: 0.0802 S33: -0.0436 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 14 B 103 REMARK 3 ORIGIN FOR THE GROUP (A): 57.588 -9.682 -7.403 REMARK 3 T TENSOR REMARK 3 T11: -0.0400 T22: -0.0616 REMARK 3 T33: -0.0621 T12: -0.0396 REMARK 3 T13: -0.0402 T23: -0.0597 REMARK 3 L TENSOR REMARK 3 L11: 1.6089 L22: 3.5879 REMARK 3 L33: 3.9142 L12: -0.7709 REMARK 3 L13: -0.4870 L23: 3.2039 REMARK 3 S TENSOR REMARK 3 S11: -0.1219 S12: 0.0380 S13: 0.0934 REMARK 3 S21: 0.1410 S22: 0.2390 S23: -0.1220 REMARK 3 S31: -0.0008 S32: 0.3814 S33: -0.1172 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 104 B 138 REMARK 3 ORIGIN FOR THE GROUP (A): 68.699 -19.8690 11.724 REMARK 3 T TENSOR REMARK 3 T11: -0.2403 T22: 0.2114 REMARK 3 T33: -0.0759 T12: 0.0705 REMARK 3 T13: 0.0083 T23: -0.2581 REMARK 3 L TENSOR REMARK 3 L11: 2.8388 L22: 6.5011 REMARK 3 L33: 4.8941 L12: -1.7311 REMARK 3 L13: -0.9880 L23: 3.6299 REMARK 3 S TENSOR REMARK 3 S11: -0.1642 S12: -0.0164 S13: -0.5365 REMARK 3 S21: 0.5899 S22: 0.4989 S23: -0.6521 REMARK 3 S31: 0.5763 S32: 1.1076 S33: -0.3347 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 152 B 174 REMARK 3 ORIGIN FOR THE GROUP (A): 56.112 -5.122 -14.594 REMARK 3 T TENSOR REMARK 3 T11: 0.0381 T22: -0.0184 REMARK 3 T33: -0.1314 T12: -0.0883 REMARK 3 T13: 0.0379 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 1.0254 L22: 19.2977 REMARK 3 L33: 8.8335 L12: -2.5679 REMARK 3 L13: 0.5275 L23: 9.1754 REMARK 3 S TENSOR REMARK 3 S11: -0.1214 S12: 0.5649 S13: -0.0568 REMARK 3 S21: -1.8549 S22: -0.0087 S23: 0.0175 REMARK 3 S31: -1.2951 S32: 0.2026 S33: 0.1302 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 176 B 220 REMARK 3 ORIGIN FOR THE GROUP (A): 74.289 -1.274 -15.599 REMARK 3 T TENSOR REMARK 3 T11: -0.0668 T22: 0.1779 REMARK 3 T33: 0.1135 T12: -0.4278 REMARK 3 T13: 0.3265 T23: -0.1686 REMARK 3 L TENSOR REMARK 3 L11: 7.7376 L22: 9.3989 REMARK 3 L33: 8.3370 L12: -1.9176 REMARK 3 L13: -2.1680 L23: 7.0435 REMARK 3 S TENSOR REMARK 3 S11: 0.4484 S12: 0.4128 S13: 0.9971 REMARK 3 S21: -1.0560 S22: 0.5988 S23: -1.4371 REMARK 3 S31: -1.4621 S32: 1.2663 S33: -1.0472 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2WVO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1290041432. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.951 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40556 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -10.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2WVN REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZED AT 292K IN 50 MM HEPES PH REMARK 280 7.5, 4.0 M NACL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 113.76667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.88333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.88333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 113.76667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 224 REMARK 465 ARG A 225 REMARK 465 ASN A 226 REMARK 465 SER A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 MET B 1 REMARK 465 GLY B 224 REMARK 465 ARG B 225 REMARK 465 ASN B 226 REMARK 465 SER B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 465 HIS B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 194 CG GLU A 194 CD 0.110 REMARK 500 GLU A 194 CD GLU A 194 OE1 0.066 REMARK 500 GLU A 194 CD GLU A 194 OE2 0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 90 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 LEU B 132 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 LEU B 156 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 119 157.91 -49.82 REMARK 500 ASP A 208 85.18 -153.39 REMARK 500 ALA A 221 10.69 -69.27 REMARK 500 ILE A 222 -48.14 -136.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1224 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1226 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2WVN RELATED DB: PDB REMARK 900 STRUCTURE OF THE HET-S N-TERMINAL DOMAIN REMARK 900 RELATED ID: 2WVQ RELATED DB: PDB REMARK 900 STRUCTURE OF THE HET-S N-TERMINAL DOMAIN . MUTANT D23A, P33H DBREF 2WVO A 1 227 UNP Q1K9D3 Q1K9D3_PODAN 1 227 DBREF 2WVO B 1 227 UNP Q1K9D3 Q1K9D3_PODAN 1 227 SEQADV 2WVO HIS A 228 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS A 229 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS A 230 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS A 231 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS A 232 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS A 233 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS B 228 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS B 229 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS B 230 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS B 231 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS B 232 UNP Q1K9D3 EXPRESSION TAG SEQADV 2WVO HIS B 233 UNP Q1K9D3 EXPRESSION TAG SEQRES 1 A 233 MET SER GLU PRO PHE GLU ILE VAL ALA GLY ALA LEU GLY SEQRES 2 A 233 VAL ALA GLY LEU PHE ASN ASN CYS VAL ALA CYS PHE GLU SEQRES 3 A 233 TYR VAL GLN LEU GLY ARG HIS PHE GLY ARG ASP TYR GLU SEQRES 4 A 233 ARG CYS GLN LEU ARG LEU ASP ILE ALA LYS VAL ARG LEU SEQRES 5 A 233 SER ARG TRP GLY GLU ALA VAL GLN ILE ASN ASP ASP PRO SEQRES 6 A 233 ARG PHE HIS SER SER ALA PRO ILE ASP LYS SER VAL GLN SEQRES 7 A 233 LEU ALA LYS SER ILE VAL GLU GLU ILE LEU LEU LEU PHE SEQRES 8 A 233 GLU SER ALA GLN LYS THR SER LYS ARG TYR GLU LEU VAL SEQRES 9 A 233 ALA ASP GLN GLN ASP LEU VAL VAL PHE GLU ASP LYS ASP SEQRES 10 A 233 MET LYS PRO ILE GLY ARG ALA LEU HIS ARG ARG LEU LYS SEQRES 11 A 233 ASP LEU VAL SER ARG ARG GLN LYS GLN THR SER LEU ALA SEQRES 12 A 233 LYS LYS THR ALA TRP ALA LEU TYR ASP GLY LYS SER LEU SEQRES 13 A 233 GLU LYS ILE VAL ASP GLN VAL ALA GLY PHE VAL ASP GLU SEQRES 14 A 233 LEU GLU LYS ALA PHE PRO ILE GLU ALA VAL CYS HIS LYS SEQRES 15 A 233 LEU ALA GLU ASN GLU ILE GLU GLU VAL GLU ASP GLU ALA SEQRES 16 A 233 SER LEU THR ILE LEU LYS ASP ALA ALA GLY GLY ILE ASP SEQRES 17 A 233 ALA ALA MET SER ASP ALA ALA ALA GLN LYS ILE ASP ALA SEQRES 18 A 233 ILE VAL GLY ARG ASN SER HIS HIS HIS HIS HIS HIS SEQRES 1 B 233 MET SER GLU PRO PHE GLU ILE VAL ALA GLY ALA LEU GLY SEQRES 2 B 233 VAL ALA GLY LEU PHE ASN ASN CYS VAL ALA CYS PHE GLU SEQRES 3 B 233 TYR VAL GLN LEU GLY ARG HIS PHE GLY ARG ASP TYR GLU SEQRES 4 B 233 ARG CYS GLN LEU ARG LEU ASP ILE ALA LYS VAL ARG LEU SEQRES 5 B 233 SER ARG TRP GLY GLU ALA VAL GLN ILE ASN ASP ASP PRO SEQRES 6 B 233 ARG PHE HIS SER SER ALA PRO ILE ASP LYS SER VAL GLN SEQRES 7 B 233 LEU ALA LYS SER ILE VAL GLU GLU ILE LEU LEU LEU PHE SEQRES 8 B 233 GLU SER ALA GLN LYS THR SER LYS ARG TYR GLU LEU VAL SEQRES 9 B 233 ALA ASP GLN GLN ASP LEU VAL VAL PHE GLU ASP LYS ASP SEQRES 10 B 233 MET LYS PRO ILE GLY ARG ALA LEU HIS ARG ARG LEU LYS SEQRES 11 B 233 ASP LEU VAL SER ARG ARG GLN LYS GLN THR SER LEU ALA SEQRES 12 B 233 LYS LYS THR ALA TRP ALA LEU TYR ASP GLY LYS SER LEU SEQRES 13 B 233 GLU LYS ILE VAL ASP GLN VAL ALA GLY PHE VAL ASP GLU SEQRES 14 B 233 LEU GLU LYS ALA PHE PRO ILE GLU ALA VAL CYS HIS LYS SEQRES 15 B 233 LEU ALA GLU ASN GLU ILE GLU GLU VAL GLU ASP GLU ALA SEQRES 16 B 233 SER LEU THR ILE LEU LYS ASP ALA ALA GLY GLY ILE ASP SEQRES 17 B 233 ALA ALA MET SER ASP ALA ALA ALA GLN LYS ILE ASP ALA SEQRES 18 B 233 ILE VAL GLY ARG ASN SER HIS HIS HIS HIS HIS HIS HET CL A1224 1 HET CL A1225 1 HET CL A1226 1 HET CL B1224 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 4(CL 1-) FORMUL 7 HOH *135(H2 O) HELIX 1 1 SER A 2 GLY A 10 1 9 HELIX 2 2 GLY A 13 CYS A 24 1 12 HELIX 3 3 ARG A 32 ARG A 36 5 5 HELIX 4 4 ASP A 37 GLN A 60 1 24 HELIX 5 5 ASP A 64 SER A 69 5 6 HELIX 6 6 ASP A 74 ALA A 105 1 32 HELIX 7 7 ASP A 106 VAL A 111 5 6 HELIX 8 8 GLU A 114 MET A 118 5 5 HELIX 9 9 LYS A 119 GLN A 137 1 19 HELIX 10 10 ASP A 152 ALA A 173 1 22 HELIX 11 11 ILE A 176 ILE A 188 1 13 HELIX 12 12 ASP A 193 GLY A 205 1 13 HELIX 13 13 ASP A 208 ILE A 219 1 12 HELIX 14 14 ASP A 220 ILE A 222 5 3 HELIX 15 15 SER B 2 GLY B 10 1 9 HELIX 16 16 GLY B 13 CYS B 24 1 12 HELIX 17 17 ARG B 32 ARG B 36 5 5 HELIX 18 18 ASP B 37 GLN B 60 1 24 HELIX 19 19 ASP B 64 SER B 69 5 6 HELIX 20 20 ASP B 74 ALA B 105 1 32 HELIX 21 21 GLN B 107 VAL B 111 5 5 HELIX 22 22 GLU B 114 MET B 118 5 5 HELIX 23 23 LYS B 119 GLN B 137 1 19 HELIX 24 24 ASP B 152 ALA B 173 1 22 HELIX 25 25 ILE B 176 GLU B 189 1 14 HELIX 26 26 ASP B 193 GLY B 205 1 13 HELIX 27 27 ASP B 208 VAL B 223 1 16 SHEET 1 AA 2 VAL A 28 LEU A 30 0 SHEET 2 AA 2 TRP A 148 LEU A 150 1 O TRP A 148 N GLN A 29 SHEET 1 BA 2 VAL B 28 LEU B 30 0 SHEET 2 BA 2 TRP B 148 LEU B 150 1 O TRP B 148 N GLN B 29 SITE 1 AC1 3 ARG A 66 ILE A 73 ASP A 74 SITE 1 AC2 3 TYR A 151 SER A 155 HOH A2046 SITE 1 AC3 3 GLY B 13 GLY B 16 HIS B 68 SITE 1 AC4 2 GLY A 13 GLY A 16 CRYST1 95.260 95.260 170.650 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010498 0.006061 0.000000 0.00000 SCALE2 0.000000 0.012122 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005860 0.00000 MTRIX1 1 -0.785500 0.158300 -0.598300 76.46000 1 MTRIX2 1 0.151200 -0.888300 -0.433500 -33.63000 1 MTRIX3 1 -0.600100 -0.431000 0.673800 18.87000 1