data_2WYP # _entry.id 2WYP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2WYP pdb_00002wyp 10.2210/pdb2wyp/pdb PDBE EBI-41763 ? ? WWPDB D_1290041763 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2XA5 unspecified 'STRUCTURE OF SUBSTRATE BINDING PROTEIN SIAP (A11N) IN COMPLEX WITH NEU5AC' PDB 2WYK unspecified 'SIAP IN COMPLEX WITH NEU5GC' PDB 2CEY unspecified 'APO STRUCTURE OF SIAP' PDB 2XWV unspecified 'SIAP COMPLEX' PDB 2XWO unspecified 'SIAP R147E MUTANT IN COMPLEX WITH SIALYLAMIDE' PDB 2CEX unspecified 'STRUCTURE OF A SIALIC ACID BINDING PROTEIN (SIAP) IN THE PRESENCE OF THE SIALIC ACID ACID ANALOGUE NEU5AC2EN' PDB 2XWI unspecified 'SIAP R147K MUTANT IN COMPLEX WITH NEU5AC' PDB 2V4C unspecified 'STRUCTURE OF SIALIC ACID BINDING PROTEIN (SIAP) IN THE PRESENCE OF KDN' PDB 2XXK unspecified 'SIAP COMPLEX' PDB 2XWK unspecified 'SIAP R147A MUTANT IN COMPLEX WITH NEU5AC' PDB 2WX9 unspecified 'CRYSTAL STRUCTURE OF THE SIALIC ACID BINDING PERIPLASMIC PROTEIN SIAP' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2WYP _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2009-11-18 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fischer, M.' 1 'Hubbard, R.E.' 2 # _citation.id primary _citation.title 'Water networks can determine the affinity of ligand binding to proteins.' _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2019 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 1520-5126 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 31518131 _citation.pdbx_database_id_DOI 10.1021/jacs.9b06275 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Darby, J.F.' 1 ? primary 'Hopkins, A.P.' 2 ? primary 'Shimizu, S.' 3 ? primary 'Roberts, S.M.' 4 ? primary 'Brannigan, J.A.' 5 ? primary 'Turkenburg, J.P.' 6 ? primary 'Thomas, G.H.' 7 ? primary 'Hubbard, R.E.' 8 ? primary 'Fischer, M.' 9 ? # _cell.entry_id 2WYP _cell.length_a 47.836 _cell.length_b 74.489 _cell.length_c 88.151 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2WYP _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SIALIC ACID-BINDING PERIPLASMIC PROTEIN SIAP' 35075.641 1 ? YES ? ? 2 non-polymer man 'deamino-beta-neuraminic acid' 268.218 1 ? ? ? ? 3 water nat water 18.015 405 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'N-ACETYLNEURAMINIC-BINDING PROTEIN, NEU5AC-BINDING PROTEIN, EXTRACYTOPLASMIC SOLUTE RECEPTOR PROTEIN SIAP' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADYDLKFGMNNGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAV FALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYAKY VGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAEN AAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAINPHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;ADYDLKFGMNNGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAV FALPYVISNYNVAQKALFDTEFGKDLIKKMDKDLGVTLLSQAYNGTRQTTSNRAINSIADMKGLKLRVPNAATNLAYAKY VGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAEN AAKYHTKLFVDGEKDLVTFFEKQGVKITHPDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAINPHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 TYR n 1 4 ASP n 1 5 LEU n 1 6 LYS n 1 7 PHE n 1 8 GLY n 1 9 MET n 1 10 ASN n 1 11 ASN n 1 12 GLY n 1 13 THR n 1 14 SER n 1 15 SER n 1 16 ASN n 1 17 GLU n 1 18 TYR n 1 19 LYS n 1 20 ALA n 1 21 ALA n 1 22 GLU n 1 23 MET n 1 24 PHE n 1 25 ALA n 1 26 LYS n 1 27 GLU n 1 28 VAL n 1 29 LYS n 1 30 GLU n 1 31 LYS n 1 32 SER n 1 33 GLN n 1 34 GLY n 1 35 LYS n 1 36 ILE n 1 37 GLU n 1 38 ILE n 1 39 SER n 1 40 LEU n 1 41 TYR n 1 42 PRO n 1 43 SER n 1 44 SER n 1 45 GLN n 1 46 LEU n 1 47 GLY n 1 48 ASP n 1 49 ASP n 1 50 ARG n 1 51 ALA n 1 52 MET n 1 53 LEU n 1 54 LYS n 1 55 GLN n 1 56 LEU n 1 57 LYS n 1 58 ASP n 1 59 GLY n 1 60 SER n 1 61 LEU n 1 62 ASP n 1 63 PHE n 1 64 THR n 1 65 PHE n 1 66 ALA n 1 67 GLU n 1 68 SER n 1 69 ALA n 1 70 ARG n 1 71 PHE n 1 72 GLN n 1 73 LEU n 1 74 PHE n 1 75 TYR n 1 76 PRO n 1 77 GLU n 1 78 ALA n 1 79 ALA n 1 80 VAL n 1 81 PHE n 1 82 ALA n 1 83 LEU n 1 84 PRO n 1 85 TYR n 1 86 VAL n 1 87 ILE n 1 88 SER n 1 89 ASN n 1 90 TYR n 1 91 ASN n 1 92 VAL n 1 93 ALA n 1 94 GLN n 1 95 LYS n 1 96 ALA n 1 97 LEU n 1 98 PHE n 1 99 ASP n 1 100 THR n 1 101 GLU n 1 102 PHE n 1 103 GLY n 1 104 LYS n 1 105 ASP n 1 106 LEU n 1 107 ILE n 1 108 LYS n 1 109 LYS n 1 110 MET n 1 111 ASP n 1 112 LYS n 1 113 ASP n 1 114 LEU n 1 115 GLY n 1 116 VAL n 1 117 THR n 1 118 LEU n 1 119 LEU n 1 120 SER n 1 121 GLN n 1 122 ALA n 1 123 TYR n 1 124 ASN n 1 125 GLY n 1 126 THR n 1 127 ARG n 1 128 GLN n 1 129 THR n 1 130 THR n 1 131 SER n 1 132 ASN n 1 133 ARG n 1 134 ALA n 1 135 ILE n 1 136 ASN n 1 137 SER n 1 138 ILE n 1 139 ALA n 1 140 ASP n 1 141 MET n 1 142 LYS n 1 143 GLY n 1 144 LEU n 1 145 LYS n 1 146 LEU n 1 147 ARG n 1 148 VAL n 1 149 PRO n 1 150 ASN n 1 151 ALA n 1 152 ALA n 1 153 THR n 1 154 ASN n 1 155 LEU n 1 156 ALA n 1 157 TYR n 1 158 ALA n 1 159 LYS n 1 160 TYR n 1 161 VAL n 1 162 GLY n 1 163 ALA n 1 164 SER n 1 165 PRO n 1 166 THR n 1 167 PRO n 1 168 MET n 1 169 ALA n 1 170 PHE n 1 171 SER n 1 172 GLU n 1 173 VAL n 1 174 TYR n 1 175 LEU n 1 176 ALA n 1 177 LEU n 1 178 GLN n 1 179 THR n 1 180 ASN n 1 181 ALA n 1 182 VAL n 1 183 ASP n 1 184 GLY n 1 185 GLN n 1 186 GLU n 1 187 ASN n 1 188 PRO n 1 189 LEU n 1 190 ALA n 1 191 ALA n 1 192 VAL n 1 193 GLN n 1 194 ALA n 1 195 GLN n 1 196 LYS n 1 197 PHE n 1 198 TYR n 1 199 GLU n 1 200 VAL n 1 201 GLN n 1 202 LYS n 1 203 PHE n 1 204 LEU n 1 205 ALA n 1 206 MET n 1 207 THR n 1 208 ASN n 1 209 HIS n 1 210 ILE n 1 211 LEU n 1 212 ASN n 1 213 ASP n 1 214 GLN n 1 215 LEU n 1 216 TYR n 1 217 LEU n 1 218 VAL n 1 219 SER n 1 220 ASN n 1 221 GLU n 1 222 THR n 1 223 TYR n 1 224 LYS n 1 225 GLU n 1 226 LEU n 1 227 PRO n 1 228 GLU n 1 229 ASP n 1 230 LEU n 1 231 GLN n 1 232 LYS n 1 233 VAL n 1 234 VAL n 1 235 LYS n 1 236 ASP n 1 237 ALA n 1 238 ALA n 1 239 GLU n 1 240 ASN n 1 241 ALA n 1 242 ALA n 1 243 LYS n 1 244 TYR n 1 245 HIS n 1 246 THR n 1 247 LYS n 1 248 LEU n 1 249 PHE n 1 250 VAL n 1 251 ASP n 1 252 GLY n 1 253 GLU n 1 254 LYS n 1 255 ASP n 1 256 LEU n 1 257 VAL n 1 258 THR n 1 259 PHE n 1 260 PHE n 1 261 GLU n 1 262 LYS n 1 263 GLN n 1 264 GLY n 1 265 VAL n 1 266 LYS n 1 267 ILE n 1 268 THR n 1 269 HIS n 1 270 PRO n 1 271 ASP n 1 272 LEU n 1 273 VAL n 1 274 PRO n 1 275 PHE n 1 276 LYS n 1 277 GLU n 1 278 SER n 1 279 MET n 1 280 LYS n 1 281 PRO n 1 282 TYR n 1 283 TYR n 1 284 ALA n 1 285 GLU n 1 286 PHE n 1 287 VAL n 1 288 LYS n 1 289 GLN n 1 290 THR n 1 291 GLY n 1 292 GLN n 1 293 LYS n 1 294 GLY n 1 295 GLU n 1 296 SER n 1 297 ALA n 1 298 LEU n 1 299 LYS n 1 300 GLN n 1 301 ILE n 1 302 GLU n 1 303 ALA n 1 304 ILE n 1 305 ASN n 1 306 PRO n 1 307 HIS n 1 308 HIS n 1 309 HIS n 1 310 HIS n 1 311 HIS n 1 312 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HAEMOPHILUS INFLUENZAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 727 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PET21B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PAH16 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SIAP_HAEIN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P44542 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2WYP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 306 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P44542 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 329 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 306 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2WYP ASN A 11 ? UNP P44542 ALA 34 'engineered mutation' 11 1 1 2WYP HIS A 307 ? UNP P44542 ? ? 'expression tag' 307 2 1 2WYP HIS A 308 ? UNP P44542 ? ? 'expression tag' 308 3 1 2WYP HIS A 309 ? UNP P44542 ? ? 'expression tag' 309 4 1 2WYP HIS A 310 ? UNP P44542 ? ? 'expression tag' 310 5 1 2WYP HIS A 311 ? UNP P44542 ? ? 'expression tag' 311 6 1 2WYP HIS A 312 ? UNP P44542 ? ? 'expression tag' 312 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 KDN 'D-saccharide, beta linking' . 'deamino-beta-neuraminic acid' 'beta-deaminoneuraminic acid; 3-deoxy-D-glycero-beta-D-galacto-non-2-ulopyranosonic acid; sialic acid' 'C9 H16 O9' 268.218 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2WYP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.00 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;30 MG/ML SIAP (IN 20 MM HEPES, 10 MM NACL AND KDN, PH 8.0) AND EQUAL VOLUME OF RESERVOIR SOLUTION (100MM MES PH 6.0, 28.5% PEG 6K, 200MM SODIUM THIOCYANATE), TEMPERATURE 277K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2009-07-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9765 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength 0.9765 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2WYP _reflns.observed_criterion_sigma_I 3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.490 _reflns.number_obs 46426 _reflns.number_all ? _reflns.percent_possible_obs 90.1 _reflns.pdbx_Rmerge_I_obs 0.11000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.8000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.200 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.49 _reflns_shell.d_res_low 1.52 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.40000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.800 _reflns_shell.pdbx_redundancy 5.40 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2WYP _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 43885 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.45 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 89.5 _refine.ls_R_factor_obs 0.139 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.136 _refine.ls_R_factor_R_free 0.195 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.10 _refine.ls_number_reflns_R_free 2361 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.975 _refine.correlation_coeff_Fo_to_Fc_free 0.954 _refine.B_iso_mean 16.08 _refine.aniso_B[1][1] 0.65000 _refine.aniso_B[2][2] -1.76000 _refine.aniso_B[3][3] 1.11000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. UNIDENTIFIED DENSITY IN PROXIMITY TO N150.' _refine.pdbx_starting_model 'PDB ENTRY 2V4C' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 2V4C _refine.pdbx_overall_ESU_R 0.090 _refine.pdbx_overall_ESU_R_Free 0.080 _refine.overall_SU_ML 0.044 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.561 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2432 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 405 _refine_hist.number_atoms_total 2855 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 28.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 2660 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1787 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.629 1.975 ? 3631 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.010 3.001 ? 4412 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.516 5.000 ? 350 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.929 26.094 ? 128 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.546 15.000 ? 481 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.259 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.112 0.200 ? 400 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 3034 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 508 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.706 1.500 ? 1633 'X-RAY DIFFRACTION' ? r_mcbond_other 0.565 1.500 ? 650 'X-RAY DIFFRACTION' ? r_mcangle_it 2.524 2.000 ? 2651 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 4.037 3.000 ? 1027 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 5.818 4.500 ? 968 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.619 3.000 ? 4447 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.53 _refine_ls_shell.number_reflns_R_work 3257 _refine_ls_shell.R_factor_R_work 0.2010 _refine_ls_shell.percent_reflns_obs 92.90 _refine_ls_shell.R_factor_R_free 0.2770 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 198 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2WYP _struct.title 'Crystal structure of sialic acid binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2WYP _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'TRANSPORT PROTEIN, SUGAR TRANSPORT, TRAP TRANSPORTER' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 15 ? SER A 32 ? SER A 15 SER A 32 1 ? 18 HELX_P HELX_P2 2 ASP A 48 ? ASP A 58 ? ASP A 48 ASP A 58 1 ? 11 HELX_P HELX_P3 3 GLU A 67 ? PHE A 74 ? GLU A 67 PHE A 74 5 ? 8 HELX_P HELX_P4 4 TYR A 75 ? LEU A 83 ? TYR A 75 LEU A 83 5 ? 9 HELX_P HELX_P5 5 ASN A 89 ? ASP A 99 ? ASN A 89 ASP A 99 1 ? 11 HELX_P HELX_P6 6 THR A 100 ? GLY A 115 ? THR A 100 GLY A 115 1 ? 16 HELX_P HELX_P7 7 SER A 137 ? LYS A 142 ? SER A 137 LYS A 142 5 ? 6 HELX_P HELX_P8 8 ALA A 151 ? GLY A 162 ? ALA A 151 GLY A 162 1 ? 12 HELX_P HELX_P9 9 ALA A 169 ? SER A 171 ? ALA A 169 SER A 171 5 ? 3 HELX_P HELX_P10 10 GLU A 172 ? THR A 179 ? GLU A 172 THR A 179 1 ? 8 HELX_P HELX_P11 11 LEU A 189 ? GLN A 195 ? LEU A 189 GLN A 195 1 ? 7 HELX_P HELX_P12 12 LYS A 196 ? VAL A 200 ? LYS A 196 VAL A 200 5 ? 5 HELX_P HELX_P13 13 ASN A 220 ? LYS A 224 ? ASN A 220 LYS A 224 1 ? 5 HELX_P HELX_P14 14 PRO A 227 ? GLN A 263 ? PRO A 227 GLN A 263 1 ? 37 HELX_P HELX_P15 15 LEU A 272 ? MET A 279 ? LEU A 272 MET A 279 1 ? 8 HELX_P HELX_P16 16 MET A 279 ? ALA A 303 ? MET A 279 ALA A 303 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 7 ? AB ? 6 ? AC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? parallel AA 2 3 ? parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AA 6 7 ? parallel AB 1 2 ? parallel AB 2 3 ? parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AC 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ILE A 36 ? TYR A 41 ? ILE A 36 TYR A 41 AA 2 TYR A 3 ? GLY A 8 ? TYR A 3 GLY A 8 AA 3 PHE A 63 ? ALA A 66 ? PHE A 63 ALA A 66 AA 4 LEU A 211 ? SER A 219 ? LEU A 211 SER A 219 AA 5 VAL A 116 ? SER A 131 ? VAL A 116 SER A 131 AA 6 PHE A 203 ? ALA A 205 ? PHE A 203 ALA A 205 AA 7 LYS A 266 ? THR A 268 ? LYS A 266 THR A 268 AB 1 ILE A 36 ? TYR A 41 ? ILE A 36 TYR A 41 AB 2 TYR A 3 ? GLY A 8 ? TYR A 3 GLY A 8 AB 3 PHE A 63 ? ALA A 66 ? PHE A 63 ALA A 66 AB 4 LEU A 211 ? SER A 219 ? LEU A 211 SER A 219 AB 5 VAL A 116 ? SER A 131 ? VAL A 116 SER A 131 AB 6 GLY A 184 ? PRO A 188 ? GLY A 184 PRO A 188 AC 1 LYS A 145 ? VAL A 148 ? LYS A 145 VAL A 148 AC 2 SER A 164 ? PRO A 167 ? SER A 164 PRO A 167 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N GLU A 37 ? N GLU A 37 O TYR A 3 ? O TYR A 3 AA 2 3 N GLY A 8 ? N GLY A 8 O PHE A 63 ? O PHE A 63 AA 3 4 N ALA A 66 ? N ALA A 66 O LEU A 215 ? O LEU A 215 AA 4 5 N VAL A 218 ? N VAL A 218 O THR A 117 ? O THR A 117 AA 5 6 N SER A 131 ? N SER A 131 O PHE A 203 ? O PHE A 203 AA 6 7 N LEU A 204 ? N LEU A 204 O LYS A 266 ? O LYS A 266 AB 1 2 N GLU A 37 ? N GLU A 37 O TYR A 3 ? O TYR A 3 AB 2 3 N GLY A 8 ? N GLY A 8 O PHE A 63 ? O PHE A 63 AB 3 4 N ALA A 66 ? N ALA A 66 O LEU A 215 ? O LEU A 215 AB 4 5 N VAL A 218 ? N VAL A 218 O THR A 117 ? O THR A 117 AB 5 6 N THR A 130 ? N THR A 130 O GLN A 185 ? O GLN A 185 AC 1 2 N LEU A 146 ? N LEU A 146 O SER A 164 ? O SER A 164 # _database_PDB_matrix.entry_id 2WYP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2WYP _atom_sites.fract_transf_matrix[1][1] 0.020905 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013425 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011344 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 MET 9 9 9 MET MET A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 TYR 18 18 18 TYR TYR A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 MET 23 23 23 MET MET A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 MET 52 52 52 MET MET A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 PHE 81 81 81 PHE PHE A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 TYR 85 85 85 TYR TYR A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLN 94 94 94 GLN GLN A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 MET 110 110 110 MET MET A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 ASN 132 132 132 ASN ASN A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 ASN 136 136 136 ASN ASN A . n A 1 137 SER 137 137 137 SER SER A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 MET 141 141 141 MET MET A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 PRO 149 149 149 PRO PRO A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 ASN 154 154 154 ASN ASN A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 TYR 160 160 160 TYR TYR A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 MET 168 168 168 MET MET A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 PHE 170 170 170 PHE PHE A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 TYR 174 174 174 TYR TYR A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 ALA 176 176 176 ALA ALA A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 ASN 180 180 180 ASN ASN A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 ASP 183 183 183 ASP ASP A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 GLN 185 185 185 GLN GLN A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 ASN 187 187 187 ASN ASN A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 ALA 194 194 194 ALA ALA A . n A 1 195 GLN 195 195 195 GLN GLN A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 VAL 200 200 200 VAL VAL A . n A 1 201 GLN 201 201 201 GLN GLN A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 PHE 203 203 203 PHE PHE A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 MET 206 206 206 MET MET A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 ASN 208 208 208 ASN ASN A . n A 1 209 HIS 209 209 209 HIS HIS A . n A 1 210 ILE 210 210 210 ILE ILE A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 ASN 212 212 212 ASN ASN A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 GLN 214 214 214 GLN GLN A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 TYR 216 216 216 TYR TYR A . n A 1 217 LEU 217 217 217 LEU LEU A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 SER 219 219 219 SER SER A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 THR 222 222 222 THR THR A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 LYS 224 224 224 LYS LYS A . n A 1 225 GLU 225 225 225 GLU GLU A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 PRO 227 227 227 PRO PRO A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 GLN 231 231 231 GLN GLN A . n A 1 232 LYS 232 232 232 LYS LYS A . n A 1 233 VAL 233 233 233 VAL VAL A . n A 1 234 VAL 234 234 234 VAL VAL A . n A 1 235 LYS 235 235 235 LYS LYS A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 ALA 238 238 238 ALA ALA A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 ASN 240 240 240 ASN ASN A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 ALA 242 242 242 ALA ALA A . n A 1 243 LYS 243 243 243 LYS LYS A . n A 1 244 TYR 244 244 244 TYR TYR A . n A 1 245 HIS 245 245 245 HIS HIS A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 LYS 247 247 247 LYS LYS A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 PHE 249 249 249 PHE PHE A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 ASP 251 251 251 ASP ASP A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 GLU 253 253 253 GLU GLU A . n A 1 254 LYS 254 254 254 LYS LYS A . n A 1 255 ASP 255 255 255 ASP ASP A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 VAL 257 257 257 VAL VAL A . n A 1 258 THR 258 258 258 THR THR A . n A 1 259 PHE 259 259 259 PHE PHE A . n A 1 260 PHE 260 260 260 PHE PHE A . n A 1 261 GLU 261 261 261 GLU GLU A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 GLN 263 263 263 GLN GLN A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 LYS 266 266 266 LYS LYS A . n A 1 267 ILE 267 267 267 ILE ILE A . n A 1 268 THR 268 268 268 THR THR A . n A 1 269 HIS 269 269 269 HIS HIS A . n A 1 270 PRO 270 270 270 PRO PRO A . n A 1 271 ASP 271 271 271 ASP ASP A . n A 1 272 LEU 272 272 272 LEU LEU A . n A 1 273 VAL 273 273 273 VAL VAL A . n A 1 274 PRO 274 274 274 PRO PRO A . n A 1 275 PHE 275 275 275 PHE PHE A . n A 1 276 LYS 276 276 276 LYS LYS A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 SER 278 278 278 SER SER A . n A 1 279 MET 279 279 279 MET MET A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 PRO 281 281 281 PRO PRO A . n A 1 282 TYR 282 282 282 TYR TYR A . n A 1 283 TYR 283 283 283 TYR TYR A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 VAL 287 287 287 VAL VAL A . n A 1 288 LYS 288 288 288 LYS LYS A . n A 1 289 GLN 289 289 289 GLN GLN A . n A 1 290 THR 290 290 290 THR THR A . n A 1 291 GLY 291 291 291 GLY GLY A . n A 1 292 GLN 292 292 292 GLN GLN A . n A 1 293 LYS 293 293 293 LYS LYS A . n A 1 294 GLY 294 294 294 GLY GLY A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 ALA 297 297 297 ALA ALA A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 LYS 299 299 299 LYS LYS A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 ILE 301 301 301 ILE ILE A . n A 1 302 GLU 302 302 302 GLU GLU A . n A 1 303 ALA 303 303 303 ALA ALA A . n A 1 304 ILE 304 304 304 ILE ILE A . n A 1 305 ASN 305 305 305 ASN ASN A . n A 1 306 PRO 306 306 306 PRO PRO A . n A 1 307 HIS 307 307 307 HIS HIS A . n A 1 308 HIS 308 308 308 HIS HIS A . n A 1 309 HIS 309 309 309 HIS HIS A . n A 1 310 HIS 310 310 ? ? ? A . n A 1 311 HIS 311 311 ? ? ? A . n A 1 312 HIS 312 312 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KDN 1 1309 1309 KDN KDN A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . C 3 HOH 37 2037 2037 HOH HOH A . C 3 HOH 38 2038 2038 HOH HOH A . C 3 HOH 39 2039 2039 HOH HOH A . C 3 HOH 40 2040 2040 HOH HOH A . C 3 HOH 41 2041 2041 HOH HOH A . C 3 HOH 42 2042 2042 HOH HOH A . C 3 HOH 43 2043 2043 HOH HOH A . C 3 HOH 44 2044 2044 HOH HOH A . C 3 HOH 45 2045 2045 HOH HOH A . C 3 HOH 46 2046 2046 HOH HOH A . C 3 HOH 47 2047 2047 HOH HOH A . C 3 HOH 48 2048 2048 HOH HOH A . C 3 HOH 49 2049 2049 HOH HOH A . C 3 HOH 50 2050 2050 HOH HOH A . C 3 HOH 51 2051 2051 HOH HOH A . C 3 HOH 52 2052 2052 HOH HOH A . C 3 HOH 53 2053 2053 HOH HOH A . C 3 HOH 54 2054 2054 HOH HOH A . C 3 HOH 55 2055 2055 HOH HOH A . C 3 HOH 56 2056 2056 HOH HOH A . C 3 HOH 57 2057 2057 HOH HOH A . C 3 HOH 58 2058 2058 HOH HOH A . C 3 HOH 59 2059 2059 HOH HOH A . C 3 HOH 60 2060 2060 HOH HOH A . C 3 HOH 61 2061 2061 HOH HOH A . C 3 HOH 62 2062 2062 HOH HOH A . C 3 HOH 63 2063 2063 HOH HOH A . C 3 HOH 64 2064 2064 HOH HOH A . C 3 HOH 65 2065 2065 HOH HOH A . C 3 HOH 66 2066 2066 HOH HOH A . C 3 HOH 67 2067 2067 HOH HOH A . C 3 HOH 68 2068 2068 HOH HOH A . C 3 HOH 69 2069 2069 HOH HOH A . C 3 HOH 70 2070 2070 HOH HOH A . C 3 HOH 71 2071 2071 HOH HOH A . C 3 HOH 72 2072 2072 HOH HOH A . C 3 HOH 73 2073 2073 HOH HOH A . C 3 HOH 74 2074 2074 HOH HOH A . C 3 HOH 75 2075 2075 HOH HOH A . C 3 HOH 76 2076 2076 HOH HOH A . C 3 HOH 77 2077 2077 HOH HOH A . C 3 HOH 78 2078 2078 HOH HOH A . C 3 HOH 79 2079 2079 HOH HOH A . C 3 HOH 80 2080 2080 HOH HOH A . C 3 HOH 81 2081 2081 HOH HOH A . C 3 HOH 82 2082 2082 HOH HOH A . C 3 HOH 83 2083 2083 HOH HOH A . C 3 HOH 84 2084 2084 HOH HOH A . C 3 HOH 85 2085 2085 HOH HOH A . C 3 HOH 86 2086 2086 HOH HOH A . C 3 HOH 87 2087 2087 HOH HOH A . C 3 HOH 88 2088 2088 HOH HOH A . C 3 HOH 89 2089 2089 HOH HOH A . C 3 HOH 90 2090 2090 HOH HOH A . C 3 HOH 91 2091 2091 HOH HOH A . C 3 HOH 92 2092 2092 HOH HOH A . C 3 HOH 93 2093 2093 HOH HOH A . C 3 HOH 94 2094 2094 HOH HOH A . C 3 HOH 95 2095 2095 HOH HOH A . C 3 HOH 96 2096 2096 HOH HOH A . C 3 HOH 97 2097 2097 HOH HOH A . C 3 HOH 98 2098 2098 HOH HOH A . C 3 HOH 99 2099 2099 HOH HOH A . C 3 HOH 100 2100 2100 HOH HOH A . C 3 HOH 101 2101 2101 HOH HOH A . C 3 HOH 102 2102 2102 HOH HOH A . C 3 HOH 103 2103 2103 HOH HOH A . C 3 HOH 104 2104 2104 HOH HOH A . C 3 HOH 105 2105 2105 HOH HOH A . C 3 HOH 106 2106 2106 HOH HOH A . C 3 HOH 107 2107 2107 HOH HOH A . C 3 HOH 108 2108 2108 HOH HOH A . C 3 HOH 109 2109 2109 HOH HOH A . C 3 HOH 110 2110 2110 HOH HOH A . C 3 HOH 111 2111 2111 HOH HOH A . C 3 HOH 112 2112 2112 HOH HOH A . C 3 HOH 113 2113 2113 HOH HOH A . C 3 HOH 114 2114 2114 HOH HOH A . C 3 HOH 115 2115 2115 HOH HOH A . C 3 HOH 116 2116 2116 HOH HOH A . C 3 HOH 117 2117 2117 HOH HOH A . C 3 HOH 118 2118 2118 HOH HOH A . C 3 HOH 119 2119 2119 HOH HOH A . C 3 HOH 120 2120 2120 HOH HOH A . C 3 HOH 121 2121 2121 HOH HOH A . C 3 HOH 122 2122 2122 HOH HOH A . C 3 HOH 123 2123 2123 HOH HOH A . C 3 HOH 124 2124 2124 HOH HOH A . C 3 HOH 125 2125 2125 HOH HOH A . C 3 HOH 126 2126 2126 HOH HOH A . C 3 HOH 127 2127 2127 HOH HOH A . C 3 HOH 128 2128 2128 HOH HOH A . C 3 HOH 129 2129 2129 HOH HOH A . C 3 HOH 130 2130 2130 HOH HOH A . C 3 HOH 131 2131 2131 HOH HOH A . C 3 HOH 132 2132 2132 HOH HOH A . C 3 HOH 133 2133 2133 HOH HOH A . C 3 HOH 134 2134 2134 HOH HOH A . C 3 HOH 135 2135 2135 HOH HOH A . C 3 HOH 136 2136 2136 HOH HOH A . C 3 HOH 137 2137 2137 HOH HOH A . C 3 HOH 138 2138 2138 HOH HOH A . C 3 HOH 139 2139 2139 HOH HOH A . C 3 HOH 140 2140 2140 HOH HOH A . C 3 HOH 141 2141 2141 HOH HOH A . C 3 HOH 142 2142 2142 HOH HOH A . C 3 HOH 143 2143 2143 HOH HOH A . C 3 HOH 144 2144 2144 HOH HOH A . C 3 HOH 145 2145 2145 HOH HOH A . C 3 HOH 146 2146 2146 HOH HOH A . C 3 HOH 147 2147 2147 HOH HOH A . C 3 HOH 148 2148 2148 HOH HOH A . C 3 HOH 149 2149 2149 HOH HOH A . C 3 HOH 150 2150 2150 HOH HOH A . C 3 HOH 151 2151 2151 HOH HOH A . C 3 HOH 152 2152 2152 HOH HOH A . C 3 HOH 153 2153 2153 HOH HOH A . C 3 HOH 154 2154 2154 HOH HOH A . C 3 HOH 155 2155 2155 HOH HOH A . C 3 HOH 156 2156 2156 HOH HOH A . C 3 HOH 157 2157 2157 HOH HOH A . C 3 HOH 158 2158 2158 HOH HOH A . C 3 HOH 159 2159 2159 HOH HOH A . C 3 HOH 160 2160 2160 HOH HOH A . C 3 HOH 161 2161 2161 HOH HOH A . C 3 HOH 162 2162 2162 HOH HOH A . C 3 HOH 163 2163 2163 HOH HOH A . C 3 HOH 164 2164 2164 HOH HOH A . C 3 HOH 165 2165 2165 HOH HOH A . C 3 HOH 166 2166 2166 HOH HOH A . C 3 HOH 167 2167 2167 HOH HOH A . C 3 HOH 168 2168 2168 HOH HOH A . C 3 HOH 169 2169 2169 HOH HOH A . C 3 HOH 170 2170 2170 HOH HOH A . C 3 HOH 171 2171 2171 HOH HOH A . C 3 HOH 172 2172 2172 HOH HOH A . C 3 HOH 173 2173 2173 HOH HOH A . C 3 HOH 174 2174 2174 HOH HOH A . C 3 HOH 175 2175 2175 HOH HOH A . C 3 HOH 176 2176 2176 HOH HOH A . C 3 HOH 177 2177 2177 HOH HOH A . C 3 HOH 178 2178 2178 HOH HOH A . C 3 HOH 179 2179 2179 HOH HOH A . C 3 HOH 180 2180 2180 HOH HOH A . C 3 HOH 181 2181 2181 HOH HOH A . C 3 HOH 182 2182 2182 HOH HOH A . C 3 HOH 183 2183 2183 HOH HOH A . C 3 HOH 184 2184 2184 HOH HOH A . C 3 HOH 185 2185 2185 HOH HOH A . C 3 HOH 186 2186 2186 HOH HOH A . C 3 HOH 187 2187 2187 HOH HOH A . C 3 HOH 188 2188 2188 HOH HOH A . C 3 HOH 189 2189 2189 HOH HOH A . C 3 HOH 190 2190 2190 HOH HOH A . C 3 HOH 191 2191 2191 HOH HOH A . C 3 HOH 192 2192 2192 HOH HOH A . C 3 HOH 193 2193 2193 HOH HOH A . C 3 HOH 194 2194 2194 HOH HOH A . C 3 HOH 195 2195 2195 HOH HOH A . C 3 HOH 196 2196 2196 HOH HOH A . C 3 HOH 197 2197 2197 HOH HOH A . C 3 HOH 198 2198 2198 HOH HOH A . C 3 HOH 199 2199 2199 HOH HOH A . C 3 HOH 200 2200 2200 HOH HOH A . C 3 HOH 201 2201 2201 HOH HOH A . C 3 HOH 202 2202 2202 HOH HOH A . C 3 HOH 203 2203 2203 HOH HOH A . C 3 HOH 204 2204 2204 HOH HOH A . C 3 HOH 205 2205 2205 HOH HOH A . C 3 HOH 206 2206 2206 HOH HOH A . C 3 HOH 207 2207 2207 HOH HOH A . C 3 HOH 208 2208 2208 HOH HOH A . C 3 HOH 209 2209 2209 HOH HOH A . C 3 HOH 210 2210 2210 HOH HOH A . C 3 HOH 211 2211 2211 HOH HOH A . C 3 HOH 212 2212 2212 HOH HOH A . C 3 HOH 213 2213 2213 HOH HOH A . C 3 HOH 214 2214 2214 HOH HOH A . C 3 HOH 215 2215 2215 HOH HOH A . C 3 HOH 216 2216 2216 HOH HOH A . C 3 HOH 217 2217 2217 HOH HOH A . C 3 HOH 218 2218 2218 HOH HOH A . C 3 HOH 219 2219 2219 HOH HOH A . C 3 HOH 220 2220 2220 HOH HOH A . C 3 HOH 221 2221 2221 HOH HOH A . C 3 HOH 222 2222 2222 HOH HOH A . C 3 HOH 223 2223 2223 HOH HOH A . C 3 HOH 224 2224 2224 HOH HOH A . C 3 HOH 225 2225 2225 HOH HOH A . C 3 HOH 226 2226 2226 HOH HOH A . C 3 HOH 227 2227 2227 HOH HOH A . C 3 HOH 228 2228 2228 HOH HOH A . C 3 HOH 229 2229 2229 HOH HOH A . C 3 HOH 230 2230 2230 HOH HOH A . C 3 HOH 231 2231 2231 HOH HOH A . C 3 HOH 232 2232 2232 HOH HOH A . C 3 HOH 233 2233 2233 HOH HOH A . C 3 HOH 234 2234 2234 HOH HOH A . C 3 HOH 235 2235 2235 HOH HOH A . C 3 HOH 236 2236 2236 HOH HOH A . C 3 HOH 237 2237 2237 HOH HOH A . C 3 HOH 238 2238 2238 HOH HOH A . C 3 HOH 239 2239 2239 HOH HOH A . C 3 HOH 240 2240 2240 HOH HOH A . C 3 HOH 241 2241 2241 HOH HOH A . C 3 HOH 242 2242 2242 HOH HOH A . C 3 HOH 243 2243 2243 HOH HOH A . C 3 HOH 244 2244 2244 HOH HOH A . C 3 HOH 245 2245 2245 HOH HOH A . C 3 HOH 246 2246 2246 HOH HOH A . C 3 HOH 247 2247 2247 HOH HOH A . C 3 HOH 248 2248 2248 HOH HOH A . C 3 HOH 249 2249 2249 HOH HOH A . C 3 HOH 250 2250 2250 HOH HOH A . C 3 HOH 251 2251 2251 HOH HOH A . C 3 HOH 252 2252 2252 HOH HOH A . C 3 HOH 253 2253 2253 HOH HOH A . C 3 HOH 254 2254 2254 HOH HOH A . C 3 HOH 255 2255 2255 HOH HOH A . C 3 HOH 256 2256 2256 HOH HOH A . C 3 HOH 257 2257 2257 HOH HOH A . C 3 HOH 258 2258 2258 HOH HOH A . C 3 HOH 259 2259 2259 HOH HOH A . C 3 HOH 260 2260 2260 HOH HOH A . C 3 HOH 261 2261 2261 HOH HOH A . C 3 HOH 262 2262 2262 HOH HOH A . C 3 HOH 263 2263 2263 HOH HOH A . C 3 HOH 264 2264 2264 HOH HOH A . C 3 HOH 265 2265 2265 HOH HOH A . C 3 HOH 266 2266 2266 HOH HOH A . C 3 HOH 267 2267 2267 HOH HOH A . C 3 HOH 268 2268 2268 HOH HOH A . C 3 HOH 269 2269 2269 HOH HOH A . C 3 HOH 270 2270 2270 HOH HOH A . C 3 HOH 271 2271 2271 HOH HOH A . C 3 HOH 272 2272 2272 HOH HOH A . C 3 HOH 273 2273 2273 HOH HOH A . C 3 HOH 274 2274 2274 HOH HOH A . C 3 HOH 275 2275 2275 HOH HOH A . C 3 HOH 276 2276 2276 HOH HOH A . C 3 HOH 277 2277 2277 HOH HOH A . C 3 HOH 278 2278 2278 HOH HOH A . C 3 HOH 279 2279 2279 HOH HOH A . C 3 HOH 280 2280 2280 HOH HOH A . C 3 HOH 281 2281 2281 HOH HOH A . C 3 HOH 282 2282 2282 HOH HOH A . C 3 HOH 283 2283 2283 HOH HOH A . C 3 HOH 284 2284 2284 HOH HOH A . C 3 HOH 285 2285 2285 HOH HOH A . C 3 HOH 286 2286 2286 HOH HOH A . C 3 HOH 287 2287 2287 HOH HOH A . C 3 HOH 288 2288 2288 HOH HOH A . C 3 HOH 289 2289 2289 HOH HOH A . C 3 HOH 290 2290 2290 HOH HOH A . C 3 HOH 291 2291 2291 HOH HOH A . C 3 HOH 292 2292 2292 HOH HOH A . C 3 HOH 293 2293 2293 HOH HOH A . C 3 HOH 294 2294 2294 HOH HOH A . C 3 HOH 295 2295 2295 HOH HOH A . C 3 HOH 296 2296 2296 HOH HOH A . C 3 HOH 297 2297 2297 HOH HOH A . C 3 HOH 298 2298 2298 HOH HOH A . C 3 HOH 299 2299 2299 HOH HOH A . C 3 HOH 300 2300 2300 HOH HOH A . C 3 HOH 301 2301 2301 HOH HOH A . C 3 HOH 302 2302 2302 HOH HOH A . C 3 HOH 303 2303 2303 HOH HOH A . C 3 HOH 304 2304 2304 HOH HOH A . C 3 HOH 305 2305 2305 HOH HOH A . C 3 HOH 306 2306 2306 HOH HOH A . C 3 HOH 307 2307 2307 HOH HOH A . C 3 HOH 308 2308 2308 HOH HOH A . C 3 HOH 309 2309 2309 HOH HOH A . C 3 HOH 310 2310 2310 HOH HOH A . C 3 HOH 311 2311 2311 HOH HOH A . C 3 HOH 312 2312 2312 HOH HOH A . C 3 HOH 313 2313 2313 HOH HOH A . C 3 HOH 314 2314 2314 HOH HOH A . C 3 HOH 315 2315 2315 HOH HOH A . C 3 HOH 316 2316 2316 HOH HOH A . C 3 HOH 317 2317 2317 HOH HOH A . C 3 HOH 318 2318 2318 HOH HOH A . C 3 HOH 319 2319 2319 HOH HOH A . C 3 HOH 320 2320 2320 HOH HOH A . C 3 HOH 321 2321 2321 HOH HOH A . C 3 HOH 322 2322 2322 HOH HOH A . C 3 HOH 323 2323 2323 HOH HOH A . C 3 HOH 324 2324 2324 HOH HOH A . C 3 HOH 325 2325 2325 HOH HOH A . C 3 HOH 326 2326 2326 HOH HOH A . C 3 HOH 327 2327 2327 HOH HOH A . C 3 HOH 328 2328 2328 HOH HOH A . C 3 HOH 329 2329 2329 HOH HOH A . C 3 HOH 330 2330 2330 HOH HOH A . C 3 HOH 331 2331 2331 HOH HOH A . C 3 HOH 332 2332 2332 HOH HOH A . C 3 HOH 333 2333 2333 HOH HOH A . C 3 HOH 334 2334 2334 HOH HOH A . C 3 HOH 335 2335 2335 HOH HOH A . C 3 HOH 336 2336 2336 HOH HOH A . C 3 HOH 337 2337 2337 HOH HOH A . C 3 HOH 338 2338 2338 HOH HOH A . C 3 HOH 339 2339 2339 HOH HOH A . C 3 HOH 340 2340 2340 HOH HOH A . C 3 HOH 341 2341 2341 HOH HOH A . C 3 HOH 342 2342 2342 HOH HOH A . C 3 HOH 343 2343 2343 HOH HOH A . C 3 HOH 344 2344 2344 HOH HOH A . C 3 HOH 345 2345 2345 HOH HOH A . C 3 HOH 346 2346 2346 HOH HOH A . C 3 HOH 347 2347 2347 HOH HOH A . C 3 HOH 348 2348 2348 HOH HOH A . C 3 HOH 349 2349 2349 HOH HOH A . C 3 HOH 350 2350 2350 HOH HOH A . C 3 HOH 351 2351 2351 HOH HOH A . C 3 HOH 352 2352 2352 HOH HOH A . C 3 HOH 353 2353 2353 HOH HOH A . C 3 HOH 354 2354 2354 HOH HOH A . C 3 HOH 355 2355 2355 HOH HOH A . C 3 HOH 356 2356 2356 HOH HOH A . C 3 HOH 357 2357 2357 HOH HOH A . C 3 HOH 358 2358 2358 HOH HOH A . C 3 HOH 359 2359 2359 HOH HOH A . C 3 HOH 360 2360 2360 HOH HOH A . C 3 HOH 361 2361 2361 HOH HOH A . C 3 HOH 362 2362 2362 HOH HOH A . C 3 HOH 363 2363 2363 HOH HOH A . C 3 HOH 364 2364 2364 HOH HOH A . C 3 HOH 365 2365 2365 HOH HOH A . C 3 HOH 366 2366 2366 HOH HOH A . C 3 HOH 367 2367 2367 HOH HOH A . C 3 HOH 368 2368 2368 HOH HOH A . C 3 HOH 369 2369 2369 HOH HOH A . C 3 HOH 370 2370 2370 HOH HOH A . C 3 HOH 371 2371 2371 HOH HOH A . C 3 HOH 372 2372 2372 HOH HOH A . C 3 HOH 373 2373 2373 HOH HOH A . C 3 HOH 374 2374 2374 HOH HOH A . C 3 HOH 375 2375 2375 HOH HOH A . C 3 HOH 376 2376 2376 HOH HOH A . C 3 HOH 377 2377 2377 HOH HOH A . C 3 HOH 378 2378 2378 HOH HOH A . C 3 HOH 379 2379 2379 HOH HOH A . C 3 HOH 380 2380 2380 HOH HOH A . C 3 HOH 381 2381 2381 HOH HOH A . C 3 HOH 382 2382 2382 HOH HOH A . C 3 HOH 383 2383 2383 HOH HOH A . C 3 HOH 384 2384 2384 HOH HOH A . C 3 HOH 385 2385 2385 HOH HOH A . C 3 HOH 386 2386 2386 HOH HOH A . C 3 HOH 387 2387 2387 HOH HOH A . C 3 HOH 388 2388 2388 HOH HOH A . C 3 HOH 389 2389 2389 HOH HOH A . C 3 HOH 390 2390 2390 HOH HOH A . C 3 HOH 391 2391 2391 HOH HOH A . C 3 HOH 392 2392 2392 HOH HOH A . C 3 HOH 393 2393 2393 HOH HOH A . C 3 HOH 394 2394 2394 HOH HOH A . C 3 HOH 395 2395 2395 HOH HOH A . C 3 HOH 396 2396 2396 HOH HOH A . C 3 HOH 397 2397 2397 HOH HOH A . C 3 HOH 398 2398 2398 HOH HOH A . C 3 HOH 399 2399 2399 HOH HOH A . C 3 HOH 400 2400 2400 HOH HOH A . C 3 HOH 401 2401 2401 HOH HOH A . C 3 HOH 402 2402 2402 HOH HOH A . C 3 HOH 403 2403 2403 HOH HOH A . C 3 HOH 404 2404 2404 HOH HOH A . C 3 HOH 405 2405 2405 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-01-26 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-03-06 5 'Structure model' 1 4 2019-09-25 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Experimental preparation' 5 4 'Structure model' Other 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' Other 9 5 'Structure model' 'Structure summary' 10 6 'Structure model' 'Atomic model' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Derived calculations' 13 6 'Structure model' 'Structure summary' 14 7 'Structure model' 'Data collection' 15 7 'Structure model' 'Database references' 16 7 'Structure model' 'Refinement description' 17 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 4 'Structure model' pdbx_database_proc 3 4 'Structure model' pdbx_database_status 4 5 'Structure model' chem_comp 5 5 'Structure model' citation 6 5 'Structure model' citation_author 7 5 'Structure model' entity 8 5 'Structure model' pdbx_database_status 9 6 'Structure model' atom_site 10 6 'Structure model' atom_site_anisotrop 11 6 'Structure model' chem_comp 12 6 'Structure model' entity 13 6 'Structure model' pdbx_chem_comp_identifier 14 6 'Structure model' pdbx_entity_nonpoly 15 6 'Structure model' struct_site 16 6 'Structure model' struct_site_gen 17 7 'Structure model' chem_comp 18 7 'Structure model' chem_comp_atom 19 7 'Structure model' chem_comp_bond 20 7 'Structure model' database_2 21 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.temp' 2 4 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 5 'Structure model' '_chem_comp.type' 4 5 'Structure model' '_citation.country' 5 5 'Structure model' '_citation.journal_abbrev' 6 5 'Structure model' '_citation.journal_id_ASTM' 7 5 'Structure model' '_citation.journal_id_CSD' 8 5 'Structure model' '_citation.journal_id_ISSN' 9 5 'Structure model' '_citation.pdbx_database_id_DOI' 10 5 'Structure model' '_citation.pdbx_database_id_PubMed' 11 5 'Structure model' '_citation.title' 12 5 'Structure model' '_citation.year' 13 5 'Structure model' '_entity.src_method' 14 5 'Structure model' '_pdbx_database_status.status_code_sf' 15 6 'Structure model' '_atom_site.auth_atom_id' 16 6 'Structure model' '_atom_site.label_atom_id' 17 6 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 18 6 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 19 6 'Structure model' '_chem_comp.name' 20 6 'Structure model' '_chem_comp.type' 21 6 'Structure model' '_entity.pdbx_description' 22 6 'Structure model' '_pdbx_entity_nonpoly.name' 23 7 'Structure model' '_chem_comp.pdbx_synonyms' 24 7 'Structure model' '_database_2.pdbx_DOI' 25 7 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 REFMAC phasing . ? 4 # _pdbx_entry_details.entry_id 2WYP _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, ALA 34 TO ASN' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2042 ? 6.34 . 2 1 O ? A HOH 2061 ? 5.84 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 309 ? CA ? A HIS 309 CA 2 1 Y 1 A HIS 309 ? C ? A HIS 309 C 3 1 Y 1 A HIS 309 ? O ? A HIS 309 O 4 1 Y 1 A HIS 309 ? CB ? A HIS 309 CB 5 1 Y 1 A HIS 309 ? CG ? A HIS 309 CG 6 1 Y 1 A HIS 309 ? ND1 ? A HIS 309 ND1 7 1 Y 1 A HIS 309 ? CD2 ? A HIS 309 CD2 8 1 Y 1 A HIS 309 ? CE1 ? A HIS 309 CE1 9 1 Y 1 A HIS 309 ? NE2 ? A HIS 309 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 310 ? A HIS 310 2 1 Y 1 A HIS 311 ? A HIS 311 3 1 Y 1 A HIS 312 ? A HIS 312 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 KDN C2 C N S 169 KDN C1 C N N 170 KDN C3 C N N 171 KDN C4 C N S 172 KDN C5 C N R 173 KDN C6 C N R 174 KDN C7 C N R 175 KDN C8 C N R 176 KDN C9 C N N 177 KDN O5 O N N 178 KDN O1A O N N 179 KDN O1B O N N 180 KDN O4 O N N 181 KDN O6 O N N 182 KDN O7 O N N 183 KDN O8 O N N 184 KDN O9 O N N 185 KDN O2 O N N 186 KDN H31 H N N 187 KDN H32 H N N 188 KDN HO2 H N N 189 KDN H4 H N N 190 KDN H5 H N N 191 KDN HO4 H N N 192 KDN H6 H N N 193 KDN HO5 H N N 194 KDN H7 H N N 195 KDN H8 H N N 196 KDN HO7 H N N 197 KDN HO8 H N N 198 KDN H91 H N N 199 KDN H92 H N N 200 KDN HO1B H N N 201 KDN HO9 H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 PHE N N N N 270 PHE CA C N S 271 PHE C C N N 272 PHE O O N N 273 PHE CB C N N 274 PHE CG C Y N 275 PHE CD1 C Y N 276 PHE CD2 C Y N 277 PHE CE1 C Y N 278 PHE CE2 C Y N 279 PHE CZ C Y N 280 PHE OXT O N N 281 PHE H H N N 282 PHE H2 H N N 283 PHE HA H N N 284 PHE HB2 H N N 285 PHE HB3 H N N 286 PHE HD1 H N N 287 PHE HD2 H N N 288 PHE HE1 H N N 289 PHE HE2 H N N 290 PHE HZ H N N 291 PHE HXT H N N 292 PRO N N N N 293 PRO CA C N S 294 PRO C C N N 295 PRO O O N N 296 PRO CB C N N 297 PRO CG C N N 298 PRO CD C N N 299 PRO OXT O N N 300 PRO H H N N 301 PRO HA H N N 302 PRO HB2 H N N 303 PRO HB3 H N N 304 PRO HG2 H N N 305 PRO HG3 H N N 306 PRO HD2 H N N 307 PRO HD3 H N N 308 PRO HXT H N N 309 SER N N N N 310 SER CA C N S 311 SER C C N N 312 SER O O N N 313 SER CB C N N 314 SER OG O N N 315 SER OXT O N N 316 SER H H N N 317 SER H2 H N N 318 SER HA H N N 319 SER HB2 H N N 320 SER HB3 H N N 321 SER HG H N N 322 SER HXT H N N 323 THR N N N N 324 THR CA C N S 325 THR C C N N 326 THR O O N N 327 THR CB C N R 328 THR OG1 O N N 329 THR CG2 C N N 330 THR OXT O N N 331 THR H H N N 332 THR H2 H N N 333 THR HA H N N 334 THR HB H N N 335 THR HG1 H N N 336 THR HG21 H N N 337 THR HG22 H N N 338 THR HG23 H N N 339 THR HXT H N N 340 TYR N N N N 341 TYR CA C N S 342 TYR C C N N 343 TYR O O N N 344 TYR CB C N N 345 TYR CG C Y N 346 TYR CD1 C Y N 347 TYR CD2 C Y N 348 TYR CE1 C Y N 349 TYR CE2 C Y N 350 TYR CZ C Y N 351 TYR OH O N N 352 TYR OXT O N N 353 TYR H H N N 354 TYR H2 H N N 355 TYR HA H N N 356 TYR HB2 H N N 357 TYR HB3 H N N 358 TYR HD1 H N N 359 TYR HD2 H N N 360 TYR HE1 H N N 361 TYR HE2 H N N 362 TYR HH H N N 363 TYR HXT H N N 364 VAL N N N N 365 VAL CA C N S 366 VAL C C N N 367 VAL O O N N 368 VAL CB C N N 369 VAL CG1 C N N 370 VAL CG2 C N N 371 VAL OXT O N N 372 VAL H H N N 373 VAL H2 H N N 374 VAL HA H N N 375 VAL HB H N N 376 VAL HG11 H N N 377 VAL HG12 H N N 378 VAL HG13 H N N 379 VAL HG21 H N N 380 VAL HG22 H N N 381 VAL HG23 H N N 382 VAL HXT H N N 383 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 KDN C2 C3 sing N N 160 KDN C2 O2 sing N N 161 KDN C2 O6 sing N N 162 KDN C2 C1 sing N N 163 KDN C3 C4 sing N N 164 KDN C4 C5 sing N N 165 KDN C4 O4 sing N N 166 KDN C5 C6 sing N N 167 KDN C5 O5 sing N N 168 KDN C6 C7 sing N N 169 KDN C6 O6 sing N N 170 KDN C7 C8 sing N N 171 KDN C7 O7 sing N N 172 KDN C8 O8 sing N N 173 KDN C8 C9 sing N N 174 KDN O1B C1 sing N N 175 KDN O1A C1 doub N N 176 KDN O9 C9 sing N N 177 KDN C3 H31 sing N N 178 KDN C3 H32 sing N N 179 KDN O2 HO2 sing N N 180 KDN C4 H4 sing N N 181 KDN C5 H5 sing N N 182 KDN O4 HO4 sing N N 183 KDN C6 H6 sing N N 184 KDN O5 HO5 sing N N 185 KDN C7 H7 sing N N 186 KDN C8 H8 sing N N 187 KDN O7 HO7 sing N N 188 KDN O8 HO8 sing N N 189 KDN C9 H91 sing N N 190 KDN C9 H92 sing N N 191 KDN O1B HO1B sing N N 192 KDN O9 HO9 sing N N 193 LEU N CA sing N N 194 LEU N H sing N N 195 LEU N H2 sing N N 196 LEU CA C sing N N 197 LEU CA CB sing N N 198 LEU CA HA sing N N 199 LEU C O doub N N 200 LEU C OXT sing N N 201 LEU CB CG sing N N 202 LEU CB HB2 sing N N 203 LEU CB HB3 sing N N 204 LEU CG CD1 sing N N 205 LEU CG CD2 sing N N 206 LEU CG HG sing N N 207 LEU CD1 HD11 sing N N 208 LEU CD1 HD12 sing N N 209 LEU CD1 HD13 sing N N 210 LEU CD2 HD21 sing N N 211 LEU CD2 HD22 sing N N 212 LEU CD2 HD23 sing N N 213 LEU OXT HXT sing N N 214 LYS N CA sing N N 215 LYS N H sing N N 216 LYS N H2 sing N N 217 LYS CA C sing N N 218 LYS CA CB sing N N 219 LYS CA HA sing N N 220 LYS C O doub N N 221 LYS C OXT sing N N 222 LYS CB CG sing N N 223 LYS CB HB2 sing N N 224 LYS CB HB3 sing N N 225 LYS CG CD sing N N 226 LYS CG HG2 sing N N 227 LYS CG HG3 sing N N 228 LYS CD CE sing N N 229 LYS CD HD2 sing N N 230 LYS CD HD3 sing N N 231 LYS CE NZ sing N N 232 LYS CE HE2 sing N N 233 LYS CE HE3 sing N N 234 LYS NZ HZ1 sing N N 235 LYS NZ HZ2 sing N N 236 LYS NZ HZ3 sing N N 237 LYS OXT HXT sing N N 238 MET N CA sing N N 239 MET N H sing N N 240 MET N H2 sing N N 241 MET CA C sing N N 242 MET CA CB sing N N 243 MET CA HA sing N N 244 MET C O doub N N 245 MET C OXT sing N N 246 MET CB CG sing N N 247 MET CB HB2 sing N N 248 MET CB HB3 sing N N 249 MET CG SD sing N N 250 MET CG HG2 sing N N 251 MET CG HG3 sing N N 252 MET SD CE sing N N 253 MET CE HE1 sing N N 254 MET CE HE2 sing N N 255 MET CE HE3 sing N N 256 MET OXT HXT sing N N 257 PHE N CA sing N N 258 PHE N H sing N N 259 PHE N H2 sing N N 260 PHE CA C sing N N 261 PHE CA CB sing N N 262 PHE CA HA sing N N 263 PHE C O doub N N 264 PHE C OXT sing N N 265 PHE CB CG sing N N 266 PHE CB HB2 sing N N 267 PHE CB HB3 sing N N 268 PHE CG CD1 doub Y N 269 PHE CG CD2 sing Y N 270 PHE CD1 CE1 sing Y N 271 PHE CD1 HD1 sing N N 272 PHE CD2 CE2 doub Y N 273 PHE CD2 HD2 sing N N 274 PHE CE1 CZ doub Y N 275 PHE CE1 HE1 sing N N 276 PHE CE2 CZ sing Y N 277 PHE CE2 HE2 sing N N 278 PHE CZ HZ sing N N 279 PHE OXT HXT sing N N 280 PRO N CA sing N N 281 PRO N CD sing N N 282 PRO N H sing N N 283 PRO CA C sing N N 284 PRO CA CB sing N N 285 PRO CA HA sing N N 286 PRO C O doub N N 287 PRO C OXT sing N N 288 PRO CB CG sing N N 289 PRO CB HB2 sing N N 290 PRO CB HB3 sing N N 291 PRO CG CD sing N N 292 PRO CG HG2 sing N N 293 PRO CG HG3 sing N N 294 PRO CD HD2 sing N N 295 PRO CD HD3 sing N N 296 PRO OXT HXT sing N N 297 SER N CA sing N N 298 SER N H sing N N 299 SER N H2 sing N N 300 SER CA C sing N N 301 SER CA CB sing N N 302 SER CA HA sing N N 303 SER C O doub N N 304 SER C OXT sing N N 305 SER CB OG sing N N 306 SER CB HB2 sing N N 307 SER CB HB3 sing N N 308 SER OG HG sing N N 309 SER OXT HXT sing N N 310 THR N CA sing N N 311 THR N H sing N N 312 THR N H2 sing N N 313 THR CA C sing N N 314 THR CA CB sing N N 315 THR CA HA sing N N 316 THR C O doub N N 317 THR C OXT sing N N 318 THR CB OG1 sing N N 319 THR CB CG2 sing N N 320 THR CB HB sing N N 321 THR OG1 HG1 sing N N 322 THR CG2 HG21 sing N N 323 THR CG2 HG22 sing N N 324 THR CG2 HG23 sing N N 325 THR OXT HXT sing N N 326 TYR N CA sing N N 327 TYR N H sing N N 328 TYR N H2 sing N N 329 TYR CA C sing N N 330 TYR CA CB sing N N 331 TYR CA HA sing N N 332 TYR C O doub N N 333 TYR C OXT sing N N 334 TYR CB CG sing N N 335 TYR CB HB2 sing N N 336 TYR CB HB3 sing N N 337 TYR CG CD1 doub Y N 338 TYR CG CD2 sing Y N 339 TYR CD1 CE1 sing Y N 340 TYR CD1 HD1 sing N N 341 TYR CD2 CE2 doub Y N 342 TYR CD2 HD2 sing N N 343 TYR CE1 CZ doub Y N 344 TYR CE1 HE1 sing N N 345 TYR CE2 CZ sing Y N 346 TYR CE2 HE2 sing N N 347 TYR CZ OH sing N N 348 TYR OH HH sing N N 349 TYR OXT HXT sing N N 350 VAL N CA sing N N 351 VAL N H sing N N 352 VAL N H2 sing N N 353 VAL CA C sing N N 354 VAL CA CB sing N N 355 VAL CA HA sing N N 356 VAL C O doub N N 357 VAL C OXT sing N N 358 VAL CB CG1 sing N N 359 VAL CB CG2 sing N N 360 VAL CB HB sing N N 361 VAL CG1 HG11 sing N N 362 VAL CG1 HG12 sing N N 363 VAL CG1 HG13 sing N N 364 VAL CG2 HG21 sing N N 365 VAL CG2 HG22 sing N N 366 VAL CG2 HG23 sing N N 367 VAL OXT HXT sing N N 368 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier KDN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DKdnpb KDN 'COMMON NAME' GMML 1.0 '2-keto-3-deoxy-b-D-nonulopyranosic acid' KDN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Kdnp KDN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Kdn # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'deamino-beta-neuraminic acid' KDN 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2V4C _pdbx_initial_refinement_model.details 'PDB ENTRY 2V4C' #